Clone Name | rbart10b04 |
---|---|
Clone Library Name | barley_pub |
>gb|AC024575.6| Homo sapiens chromosome 19 clone CTD-2342J14, complete sequence Length = 119638 Score = 40.1 bits (20), Expect = 0.93 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 ccatcatgcttcatgaatgg 35 |||||||||||||||||||| Sbjct: 17960 ccatcatgcttcatgaatgg 17979
>gb|AC132436.3| Mus musculus BAC clone RP23-226J18 from 1, complete sequence Length = 248067 Score = 40.1 bits (20), Expect = 0.93 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ttttacataaatgccatcat 22 |||||||||||||||||||| Sbjct: 28392 ttttacataaatgccatcat 28373
>gb|AC124680.10| Mus musculus chromosome 14, clone RP23-383A19, complete sequence Length = 202809 Score = 38.2 bits (19), Expect = 3.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 7 acataaatgccatcatgct 25 ||||||||||||||||||| Sbjct: 150013 acataaatgccatcatgct 149995
>emb|AL136438.10| Human DNA sequence from clone RP11-111G7 on chromosome 13q11-12.3 Contains part of the ATP8A2 gene for ATPase, aminophospholipid transporter-like, Class I, type 8A, member 2 (ML-1 protein)(IB, ATP, ML-1, ATPIB, DKFZP434B1913), complete sequence Length = 178319 Score = 38.2 bits (19), Expect = 3.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 3 ttttacataaatgccatcatgct 25 ||||| ||||||||||||||||| Sbjct: 50697 ttttagataaatgccatcatgct 50675
>gb|AC158935.4| Mus musculus chromosome 3, clone RP24-180K20, complete sequence Length = 157284 Score = 38.2 bits (19), Expect = 3.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 41 tagcatgcagttacatatt 59 ||||||||||||||||||| Sbjct: 84970 tagcatgcagttacatatt 84988
>gb|AC107928.3| Homo sapiens chromosome 11, clone RP11-412L22, complete sequence Length = 160764 Score = 38.2 bits (19), Expect = 3.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 24 cttcatgaatggatacata 42 ||||||||||||||||||| Sbjct: 114940 cttcatgaatggatacata 114958
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 38.2 bits (19), Expect = 3.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 40 atagcatgcagttacatat 58 ||||||||||||||||||| Sbjct: 2215199 atagcatgcagttacatat 2215217
>emb|BX284612.22| Mouse DNA sequence from clone RP23-332H17 on chromosome 2, complete sequence Length = 132718 Score = 38.2 bits (19), Expect = 3.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 atttttacataaatgccat 19 ||||||||||||||||||| Sbjct: 2175 atttttacataaatgccat 2157
>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1351_C05 Length = 112465 Score = 38.2 bits (19), Expect = 3.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 40 atagcatgcagttacatat 58 ||||||||||||||||||| Sbjct: 83101 atagcatgcagttacatat 83119
>emb|CR855879.8| Zebrafish DNA sequence from clone DKEY-237I12 in linkage group 10, complete sequence Length = 71257 Score = 38.2 bits (19), Expect = 3.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 64 aagggttggcattgcatgc 82 ||||||||||||||||||| Sbjct: 53583 aagggttggcattgcatgc 53601
>gb|AC163693.3| Mus musculus BAC clone RP24-70O15 from chromosome 13, complete sequence Length = 219890 Score = 38.2 bits (19), Expect = 3.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 catgaatggatacatagca 45 ||||||||||||||||||| Sbjct: 96189 catgaatggatacatagca 96207 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 803,319 Number of Sequences: 3902068 Number of extensions: 803319 Number of successful extensions: 51710 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 51676 Number of HSP's gapped (non-prelim): 34 length of query: 87 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 66 effective length of database: 17,151,101,840 effective search space: 1131972721440 effective search space used: 1131972721440 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)