ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart10b01 |
|---|---|
| Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 288 bits (738), Expect = 5e-78 Identities = 132/141 (93%), Positives = 136/141 (96%) Frame = -1 Query: 541 DRYDVLALELAKHNICGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDN 362 DRYDVLALELAKHNI GGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESD Sbjct: 164 DRYDVLALELAKHNIRGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDK 223 Query: 361 GCNQNFGWEGSWNEWTAAYPATRFYVGLTADDKSYQWVHPKNVYYSVAPVSQKKDNYGGI 182 CNQN GWEGSW++WTAAYPATRFYVGLTADDKS+QWVHPKNVYY VAPV+QKKDNYGGI Sbjct: 224 WCNQNLGWEGSWDKWTAAYPATRFYVGLTADDKSHQWVHPKNVYYGVAPVAQKKDNYGGI 283 Query: 181 MLWDRYFDKQTNYSSLIKYYA 119 MLWDRYFDKQTNYSSLIKYYA Sbjct: 284 MLWDRYFDKQTNYSSLIKYYA 304
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 119 bits (298), Expect = 5e-27 Identities = 66/147 (44%), Positives = 85/147 (57%), Gaps = 6/147 (4%) Frame = -1 Query: 541 DRYDVLALELAKHNICGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDN 362 D YD LA L +N P+ LTATVRC +P + +AL T +FER+HVR Y+ D Sbjct: 160 DHYDDLARNLYAYNKMYRARTPVRLTATVRCAFPDP-RMKKALDTKLFERIHVRFYD-DA 217 Query: 361 GCNQNF----GWEGSWNEWTAAYPATRFYVGLTADDK--SYQWVHPKNVYYSVAPVSQKK 200 C+ N G WN+WTA YP + Y+GL A + V K +YY + P QK Sbjct: 218 TCSYNHAGLAGVMAQWNKWTARYPGSHVYLGLAAANVPGKNDNVFIKQLYYDLLPNVQKA 277 Query: 199 DNYGGIMLWDRYFDKQTNYSSLIKYYA 119 NYGGIMLWDR++DKQT Y +KY+A Sbjct: 278 KNYGGIMLWDRFYDKQTGYGKTVKYWA 304
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 100 bits (249), Expect = 3e-21 Identities = 53/135 (39%), Positives = 79/135 (58%), Gaps = 1/135 (0%) Frame = -1 Query: 541 DRYDVLALELAKHNICGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDN 362 D YD LA L +N + LTAT RC YP + +ALATG+F R+HVR + D Sbjct: 157 DHYDDLARRLDGYNKYYRGRVGVLLTATTRCSYPDH-RLEKALATGVFARIHVRMF-GDE 214 Query: 361 GCNQNFGWEGSWNEWTAAYPATRFYVGLTAD-DKSYQWVHPKNVYYSVAPVSQKKDNYGG 185 C + + SW +W AA+P ++ Y+GL A ++ W+ K++YY + + NYGG Sbjct: 215 QCTMSPRY--SWEKWAAAFPGSKVYIGLVASPEQDSAWMFQKDLYYEMLQFVRSLPNYGG 272 Query: 184 IMLWDRYFDKQTNYS 140 + ++DRYFDK+ NY+ Sbjct: 273 LAIYDRYFDKKANYT 287
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 78.2 bits (191), Expect = 1e-14 Identities = 57/145 (39%), Positives = 77/145 (53%), Gaps = 9/145 (6%) Frame = -1 Query: 535 YDVLALELAKHNICGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDN-- 362 Y LA L++H G GK L+LTA +C +P G AL TG+F+ V V+ Y + Sbjct: 157 YIALARRLSEH---GQQGKKLYLTAAPQCPFPDKLLNG-ALQTGLFDYVWVQFYNNPECE 212 Query: 361 --GCNQNFGWEGSWNEWTAAYPATRFYVGL----TADDKSYQWVHPKNVYYS-VAPVSQK 203 ++NF + WN+WT+ PA + Y+GL TA Y PK V S V P + Sbjct: 213 FMSNSENF--KRRWNQWTSI-PAKKLYIGLPAAKTAAGNGYI---PKQVLMSQVLPFLKG 266 Query: 202 KDNYGGIMLWDRYFDKQTNYSSLIK 128 YGG+MLW+R FD Q YSS I+ Sbjct: 267 SSKYGGVMLWNRKFDVQCGYSSAIR 291
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 77.8 bits (190), Expect = 2e-14 Identities = 50/142 (35%), Positives = 77/142 (54%), Gaps = 6/142 (4%) Frame = -1 Query: 535 YDVLALELAKHNICGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGC 356 +D LA L++ G+ ++LTA +C +P G AL TG+F+ V V+ Y + C Sbjct: 159 WDDLARALSRIEFQQERGRKVYLTAAPQCPFPDKVP-GTALNTGLFDYVWVQFYNNPP-C 216 Query: 355 NQNFGWEG----SWNEWTAAYPATRFYVGLTADDKSY-QWVHPKNVYYS-VAPVSQKKDN 194 + G SWN WT++ +T ++GL A + + P NV S + PV ++ Sbjct: 217 QYSSGNTNNLLNSWNRWTSSINSTGSFMGLPASSAAAGRGFIPANVLTSQILPVIKRSPK 276 Query: 193 YGGIMLWDRYFDKQTNYSSLIK 128 YGG+MLW +Y+D Q+ YSS IK Sbjct: 277 YGGVMLWSKYYDDQSGYSSSIK 298
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 72.4 bits (176), Expect = 8e-13 Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 6/124 (4%) Frame = -1 Query: 484 GKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNFG----WEGSWNEW 317 GK ++LTA +C +P ++G AL TG+F+ V V+ Y + C + G SWN W Sbjct: 174 GKKVYLTAAPQCPFPDR-YLGTALNTGLFDYVWVQFYNNPP-CQYSSGNINNIINSWNRW 231 Query: 316 TAAYPATRFYVGLTADDKSYQ--WVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNY 143 T + A + ++GL A ++ +V P + + P +K YGG+MLW +++D + Y Sbjct: 232 TTSINAGKIFLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGY 291 Query: 142 SSLI 131 SS I Sbjct: 292 SSSI 295
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 69.3 bits (168), Expect = 6e-12 Identities = 48/138 (34%), Positives = 77/138 (55%), Gaps = 8/138 (5%) Frame = -1 Query: 517 ELAKHNICGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYES-----DNGCN 353 ELAK + G + ++L+A +C YP A H+ A+ TG+F+ V V+ Y + NG Sbjct: 158 ELAKA-LNGFSQQKVYLSAAPQCPYPDA-HLDSAIQTGLFDYVWVQFYNNPQCQYSNGNI 215 Query: 352 QNFGWEGSWNEWTAAYPATRFYVGLTADDKSYQ--WVHPKNVYYS-VAPVSQKKDNYGGI 182 N +WN+WT++ A + ++G+ A D + + P +V S V P + YGG+ Sbjct: 216 NNL--VNAWNQWTSSQ-AKQVFLGVPASDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGV 272 Query: 181 MLWDRYFDKQTNYSSLIK 128 M+WDR+ D Q+ YS+ IK Sbjct: 273 MIWDRFNDAQSGYSNAIK 290
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 68.9 bits (167), Expect = 8e-12 Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 7/142 (4%) Frame = -1 Query: 535 YDVLALELAKHNICGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYES---- 368 +D LA L+K + G+ ++LT +C +P +G AL T F+ V ++ Y + Sbjct: 163 WDDLARTLSKFS---HRGRKIYLTGAPQCPFPDRL-MGSALNTKRFDYVWIQFYNNPPCS 218 Query: 367 -DNGCNQNFGWEGSWNEWTAAYPATRFYVGLTADDKSYQ--WVHPKNVYYSVAPVSQKKD 197 +G QN SWN+WT + A +F++GL A ++ ++ P + + P +K Sbjct: 219 YSSGNTQNLF--DSWNKWTTSIAAQKFFLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSR 276 Query: 196 NYGGIMLWDRYFDKQTNYSSLI 131 YGG+MLW +++D + YSS I Sbjct: 277 KYGGVMLWSKFWDDKNGYSSSI 298
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 63.9 bits (154), Expect = 3e-10 Identities = 51/145 (35%), Positives = 72/145 (49%), Gaps = 9/145 (6%) Frame = -1 Query: 535 YDVLALELAKHNICGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYES---- 368 +DVLA EL + L+A +C P A H+ A+ TG+F+ V V+ Y + Sbjct: 159 WDVLAQELKNFG-------QVILSAAPQCPIPDA-HLDAAIKTGLFDSVWVQFYNNPPCM 210 Query: 367 --DNGCNQNFGWEGSWNEWTAAYPATRFYVGLTADDKSYQ--WVHPKNVYYS-VAPVSQK 203 DN N SWN+WTA +P ++ Y+GL A ++ P +V S V P + Sbjct: 211 FADNADNLL----SSWNQWTA-FPTSKLYMGLPAAREAAPSGGFIPADVLISQVLPTIKA 265 Query: 202 KDNYGGIMLWDRYFDKQTNYSSLIK 128 NYGG+MLW + FD YS IK Sbjct: 266 SSNYGGVMLWSKAFD--NGYSDSIK 288
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 61.6 bits (148), Expect = 1e-09 Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 6/126 (4%) Frame = -1 Query: 490 GPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNFGWEG----SWN 323 G L LTA +C P A H+ A+ TG+F+ V V+ Y + C + G SWN Sbjct: 172 GFNSQLLLTAAPQCPIPDA-HLDTAIKTGLFDIVWVQFYNNPP-CQYSSGNTNDLISSWN 229 Query: 322 EWTAAYPATRFYVGLTADDKSY-QWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQT 149 +WT++ A + ++G+ A + P +V S V P + YGG+MLWDR+ D Q+ Sbjct: 230 QWTSSQ-AKQLFLGVPASTAAAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDGQS 288 Query: 148 NYSSLI 131 YS I Sbjct: 289 GYSGAI 294
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 61.2 bits (147), Expect = 2e-09 Identities = 48/141 (34%), Positives = 73/141 (51%), Gaps = 5/141 (3%) Frame = -1 Query: 535 YDVLALELAKHNICGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGC 356 +D LA LA HN K ++L+A +C P A+ + A+ATG+F+ V V+ Y + C Sbjct: 158 WDDLARALAGHN---NGQKTVYLSAAPQCPLPDAS-LSTAIATGLFDYVWVQFYNNPP-C 212 Query: 355 NQNFGWEG---SWNEWTAAYPATRFYVGLTAD-DKSYQWVHPKNVYYS-VAPVSQKKDNY 191 + + SWN+WT A + ++GL A D + P + S V P + Y Sbjct: 213 QYDTSADNLLSSWNQWTTVQ-ANQIFLGLPASTDAAGSGFIPADALTSQVLPTIKGSAKY 271 Query: 190 GGIMLWDRYFDKQTNYSSLIK 128 GG+MLW + +D + YSS IK Sbjct: 272 GGVMLWSKAYD--SGYSSAIK 290
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 55.8 bits (133), Expect = 7e-08 Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 6/136 (4%) Frame = -1 Query: 517 ELAKHNICGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNFG- 341 ELAK + ++LTA +C +P G AL+TG+F+ V V+ Y + C + G Sbjct: 158 ELAKTLSQFSQQRKVYLTAAPQCPFPDTWLNG-ALSTGLFDYVWVQFYNNPP-CQYSGGS 215 Query: 340 ---WEGSWNEWTAAYPATRFYVGL-TADDKSYQWVHPKNVYYS-VAPVSQKKDNYGGIML 176 + WN+W A A + ++GL A + P +V S V P+ YGG+ML Sbjct: 216 ADNLKNYWNQWNAIQ-AGKIFLGLPAAQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVML 274 Query: 175 WDRYFDKQTNYSSLIK 128 W +++D YSS IK Sbjct: 275 WSKFYD--NGYSSAIK 288
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 42.7 bits (99), Expect = 6e-04 Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 11/116 (9%) Frame = -1 Query: 439 PAAHVGRALATGIFERVHVRTYESDNGCNQNFG----WEGSWNEWT-AAYPATR-FYVGL 278 P ++ A+ T F+ + VR Y +D C + G +W WT + YP + ++ L Sbjct: 193 PDEYLDNAIQTRHFDYIFVRFY-NDRSCQYSTGNIQRIRNAWLSWTKSVYPRDKNLFLEL 251 Query: 277 TADDKSYQ---WVHPKNVYYSVAP-VSQKKDNYGGIMLWDRYFDKQTNYS-SLIKY 125 A + ++ P + V P + + Y GI LW+R DK+T YS ++I+Y Sbjct: 252 PASQATAPGGGYIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNIIRY 307
>CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14)| Length = 542 Score = 32.7 bits (73), Expect = 0.67 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 8/106 (7%) Frame = -1 Query: 463 ATVRCGYPPAAHVGRALATGIFERVHVRTYE---SDNGCNQNFGWEGSWNEWTAAYPATR 293 A +C +P A +G L + F+ V+V+ Y S G + NF +W + T+ + Sbjct: 192 AAPQCPFPDAI-LGSVLNSASFDYVNVQFYNNYCSATGSSFNFDTWDNWAKTTSPNKNVK 250 Query: 292 FYVGL----TADDKSYQWVHPKNVYYSVAP-VSQKKDNYGGIMLWD 170 + TA Y P + ++ P ++ K +YGG+ +WD Sbjct: 251 IMFTVPGSSTAAGSGYV---PMSTLQTIVPSLASKYSSYGGVSVWD 293
>CHI1_RHIOL (P29026) Chitinase 1 precursor (EC 3.2.1.14)| Length = 540 Score = 31.6 bits (70), Expect = 1.5 Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 8/106 (7%) Frame = -1 Query: 463 ATVRCGYPPAAHVGRALATGIFERVHVRTYE---SDNGCNQNFGWEGSWNEWTAAYPATR 293 A +C +P A +G L + F+ V+V+ Y S G + NF +W + T+ + Sbjct: 192 AAPQCPFPDAI-LGSVLNSASFDYVNVQFYNNYCSATGSSFNFDTWDNWAKTTSPNKNVK 250 Query: 292 FYVGL----TADDKSYQWVHPKNVYYSVAP-VSQKKDNYGGIMLWD 170 + TA Y P + ++ P ++ + +YGG+ +WD Sbjct: 251 IMFTIPGSPTAAGSGYV---PMSTLQTIVPSLASEYSSYGGVSVWD 293
>NIRB_KLEOX (Q06458) Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)| Length = 957 Score = 30.4 bits (67), Expect = 3.3 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = -1 Query: 283 GLTADDKSYQWVH-PKNVYYSVAPVSQKKDNYGGIMLWD 170 G T +SYQW H P+ VY + + K+ GG+++ D Sbjct: 336 GRTPGCQSYQWTHGPQQVYKKIVVSADGKNLLGGVLVGD 374
>Y2906_CAUCR (Q9A4D0) UPF0276 protein CC2906| Length = 280 Score = 29.3 bits (64), Expect = 7.4 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = -1 Query: 520 LELAKHNICGGPGKPLHLTATVRCGYPPAAHVGRALATG 404 +E+ N G G+PLH+ VR YP A H G +++ G Sbjct: 32 VEVISENFMVGGGRPLHVIDAVRERYPVALH-GVSMSVG 69
>ENO_DEIRA (Q9RR60) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 422 Score = 28.9 bits (63), Expect = 9.6 Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Frame = -1 Query: 469 LTATVRCGYPPAAHVGRALATGIFERVHVRTY--ESDNGCNQNFGWEGSWNEWTAAYPAT 296 L A + GY P + AL + E Y ES+ + W +WT+ YP Sbjct: 221 LEAIQQAGYEPGKDICIALDPAVTELYKDGQYHLESEGRVLSSDEMIDFWADWTSRYPIV 280 Query: 295 RFYVGLTADD 266 GL DD Sbjct: 281 SIEDGLAEDD 290
>CPSM_RANCA (Q91293) Carbamoyl-phosphate synthase [ammonia], mitochondrial| precursor (EC 6.3.4.16) (Carbamoyl-phosphate synthetase I) (CPSase I) Length = 1496 Score = 28.9 bits (63), Expect = 9.6 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Frame = +3 Query: 345 KFWLHPLSLSYVLTWTRSKIPVASARPTCAAGGYPHRTVAVRCS-GFPGP 491 +F LHP SL YV+ +++ +SA + A GYP +A + + G P P Sbjct: 697 QFALHPTSLEYVIIEVNARLSRSSALAS-KATGYPLAFIAAKIALGIPLP 745
>G6PI_NEUCR (Q7S986) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 561 Score = 28.9 bits (63), Expect = 9.6 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 6/73 (8%) Frame = -1 Query: 346 FGWE----GSWNEWTAAYPATRFYVGLTADDKSYQWVHPKNVYYSVAPVSQKKDNYGGIM 179 FG+E G ++ W+A + YVG K H + ++ AP+ + GGI+ Sbjct: 276 FGFESWVGGRYSVWSAIGLSVALYVGYENFHKFLAGAHAMDNHFRTAPLKENIPVLGGIL 335 Query: 178 -LW-DRYFDKQTN 146 +W +++ QT+ Sbjct: 336 SVWYSNFYNAQTH 348 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,748,649 Number of Sequences: 219361 Number of extensions: 1115201 Number of successful extensions: 3306 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 3210 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3288 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4258037034 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
