ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart10b01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ422119.1|TAE422119 Triticum aestivum mRNA for xylanase inh... 733 0.0
2dbj|AB204556.1| Triticum aestivum Xip-III gene for xylanase inhi... 490 e-135
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
4dbj|AP004732.3| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
5gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
6dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
7dbj|AK102862.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
8dbj|AK063939.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
9gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
10dbj|D55712.1| Oryza sativa (japonica cultivar-group) mRNA for ch... 56 1e-04
11dbj|AB027420.1| Oryza sativa mRNA for class III chitinase homolo... 56 1e-04
12dbj|AB027419.1| Oryza sativa mRNA for class III chitinase homolo... 56 1e-04
13dbj|AB027418.1| Oryza sativa mRNA for class III chitinase homolo... 56 1e-04
14dbj|AB027417.1| Oryza sativa mRNA for class III chitinase homolo... 56 1e-04
15dbj|AB027416.1| Oryza sativa mRNA for class III chitinase homolo... 56 1e-04
16dbj|AB027415.1| Oryza sativa (japonica cultivar-group) mRNA for ... 56 1e-04
17dbj|AK102649.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
18dbj|AK101155.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
19dbj|AK073595.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
20dbj|AK106319.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.008
21dbj|D55710.1| Oryza sativa (japonica cultivar-group) mRNA for ch... 50 0.008
22ref|NM_193094.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.030
23dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.030
24dbj|AK111717.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.030
25dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.030
26gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 44 0.47
27ref|XM_792322.1| PREDICTED: Strongylocentrotus purpuratus simila... 44 0.47
28gb|S82314.1| PRm 3=chitinase {clone CHEM 5} [Zea mays=maize, cv.... 44 0.47
29gb|AY107125.1| Zea mays PCO125117 mRNA sequence 44 0.47
30gb|AF440523.1| Pseudomonas aeruginosa strain C genomic sequence,... 44 0.47
31gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 42 1.9
32gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.9
33ref|XM_754996.1| Ustilago maydis 521 hypothetical protein (UM039... 42 1.9
34emb|CR661974.2|CNS0F9R0 Tetraodon nigroviridis full-length cDNA 42 1.9
35emb|AL590608.6| Human DNA sequence from clone RP11-363F12 on chr... 42 1.9
36emb|CR378665.1| Photobacterium profundum SS9; segment 3/12 42 1.9
37emb|AJ297529.2|PST297529 Pseudomonas stutzeri nif operon and fla... 42 1.9
38gb|AC129928.3| Homo sapiens chromosome 8, clone RP11-1112C19, co... 42 1.9
39emb|BX950184.7| Zebrafish DNA sequence from clone CH211-103O12 i... 42 1.9
40emb|BX537141.17| Zebrafish DNA sequence from clone DKEY-9E8 in l... 42 1.9
41emb|BX119984.15| Zebrafish DNA sequence from clone DKEY-257N17 i... 42 1.9
42dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
43gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 42 1.9
44gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.9
45dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome 42 1.9
46dbj|BS000117.1| Pan troglodytes chromosome 22 clone:RP43-027E03,... 42 1.9
47dbj|AB063285.1| Homo sapiens HLCS gene for holocarboxylase synth... 42 1.9
48dbj|AK102731.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
49dbj|AK064356.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
50dbj|AK064281.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
51emb|AL929231.3| Zebrafish DNA sequence from clone BUSM1-46P4, co... 42 1.9
52emb|AL928816.2| Zebrafish DNA sequence from clone BUSM1-265N4, c... 42 1.9
53dbj|AP001726.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 1.9
54dbj|AP005362.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 1.9
55dbj|AP000698.1| Homo sapiens genomic DNA, chromosome 21q22.2, co... 42 1.9
56ref|NM_188421.1| Oryza sativa (japonica cultivar-group), predic... 40 7.3
57gb|AC104270.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.3
58gb|AC150651.3| Bos taurus BAC CH240-451E16 (Children's Hospital... 40 7.3
59ref|XM_323898.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.3
60ref|XM_950893.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.3
61gb|AC159638.2| Mus musculus BAC clone RP24-78C16 from chromosome... 40 7.3
62gb|AC185956.1| Populus trichocarpa clone Pop1-93N08, complete se... 40 7.3
63gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 40 7.3
64emb|CR318625.10| Zebrafish DNA sequence from clone DKEY-119A7 in... 40 7.3
65emb|CR388121.11| Zebrafish DNA sequence from clone DKEY-161F5 in... 40 7.3
66ref|XM_733178.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 7.3
67ref|XM_739283.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 7.3
68gb|AC121238.17| Medicago truncatula clone mth2-34p9, complete se... 40 7.3
69emb|CR762396.8| Zebrafish DNA sequence from clone DKEY-262O12 in... 40 7.3
70emb|AL591503.9| Human DNA sequence from clone RP11-571E6 on chro... 40 7.3
71emb|BX855620.10| Zebrafish DNA sequence from clone DKEY-9M4 in l... 40 7.3
72emb|CR382398.1| Plasmodium falciparum chromosome 6, complete seq... 40 7.3
73emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete ... 40 7.3
74emb|BX640424.1| Bordetella parapertussis strain 12822, complete ... 40 7.3
75emb|AL845544.11| Zebrafish DNA sequence from clone BUSM1-133F4 i... 40 7.3
76emb|BX569788.6| Zebrafish DNA sequence from clone CH211-161N19 i... 40 7.3
77gb|AC104137.5| Homo sapiens BAC clone RP11-807H7 from 4, complet... 40 7.3
78gb|AF465311.1| Dictyostelium discoideum ABC transporter ABCA.9 (... 40 7.3
79gb|AC154693.2| Mus musculus BAC clone RP24-340P22 from chromosom... 40 7.3
80dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
81dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
82dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
83dbj|AP005645.1| Streptomyces avermitilis MA-4680 plasmid SAP1 DN... 40 7.3
84dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
85dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 7.3
86dbj|AP005682.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
87dbj|AK073843.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.3
88dbj|AK070219.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.3
89emb|BX901933.15| Zebrafish DNA sequence from clone DKEY-114H6 in... 40 7.3
90emb|CR391947.13| Zebrafish DNA sequence from clone DKEYP-88A4 in... 40 7.3
91gb|AC079959.25| Mus musculus strain C57BL/6J chromosome 12 clone... 40 7.3
92emb|BX927330.9| Zebrafish DNA sequence from clone DKEY-43B14 in ... 40 7.3
93dbj|AK115302.1| Ciona intestinalis cDNA, clone:cieg043h05, full ... 40 7.3
94gb|AC160641.2| Ornithorhynchus anatinus BAC clone OABb-469P24 fr... 40 7.3
95gb|AC004062.1|AC004062 Homo sapiens chromosome 4 clone B316M24 m... 40 7.3
96gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 7.3
97emb|BX088567.6| Mouse DNA sequence from clone RP23-21L20 on chro... 40 7.3 
>emb|AJ422119.1|TAE422119 Triticum aestivum mRNA for xylanase inhibitor protein I (xipI gene)
          Length = 915

 Score =  733 bits (370), Expect = 0.0
 Identities = 412/426 (96%)
 Strand = Plus / Minus

                                                                       
Query: 116 tcaggcgtagtacttgatcaagctgctgtagttggtctgcttgtcgaagtaccggtccca 175
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 915 tcaggcgtagtacttgatcaagctgctgtagttggtctgcttgtcgaagtatcggtccca 856

                                                                       
Query: 176 gagcatgatgccgccgtagttgtccttcttctgcgacaccggcgcgacgctgtagtagac 235
           ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 855 gagcatgatgccgccgtagttgtccttcttctgcgccaccggcgcgacgccgtagtagac 796

                                                                       
Query: 236 gttcttggggtgtacccactggtaggacttgtcgtccgccgtgagcccgacgtagaaccg 295
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 795 gttcttggggtgtacccactggtgggacttgtcgtccgccgtgagcccgacgtagaaccg 736

                                                                       
Query: 296 ggtggcagggtacgccgccgtccactcgttccacgagccctcccacccaaagttctggtt 355
           |||||| ||||||||||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 735 ggtggccgggtacgccgccgtccacttgtcccacgagccctcccacccaaggttctggtt 676

                                                                       
Query: 356 gcacccattgtcgctctcgtatgtcctcacgtggacgcgctcgaagatccccgtcgccag 415
           |||||  |||||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 675 gcaccacttgtcgctctcgtaggtcctcacgtgggcgcgctcgaagatccccgtcgccag 616

                                                                       
Query: 416 cgcccgccccacgtgcgccgccggcgggtacccgcaccggaccgtcgccgtcaggtgcag 475
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 cgcccgccccacgtgcgccgccggcgggtacccgcaccggaccgtcgccgtcaggtgcag 556

                                                                       
Query: 476 cggcttccccggccccccgcagatgttgtgcttggccagctccagcgccagcacgtcgta 535
           |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 555 cggcttccccgggcccccgcggatgttgtgcttggccagctccagcgccagcacgtcgta 496

                 
Query: 536 gcggtc 541
           ||||||
Sbjct: 495 gcggtc 490
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>dbj|AB204556.1| Triticum aestivum Xip-III gene for xylanase inhibitor XIP-III,
           complete cds
          Length = 934

 Score =  490 bits (247), Expect = e-135
 Identities = 384/429 (89%), Gaps = 3/429 (0%)
 Strand = Plus / Minus

                                                                       
Query: 116 tcaggcgtagtacttgatcaagctgctgtagttggtctgcttgtcgaagtaccggtccca 175
           ||||||||||||||||||  |||| ||||||| | |||||||||||||||| ||||||||
Sbjct: 932 tcaggcgtagtacttgatgtagctactgtagtcgctctgcttgtcgaagtatcggtccca 873

                                                                       
Query: 176 gagcatgatgccgccgtagttgtccttcttctgcgacaccggcgcgacgctgtagtagac 235
           ||||||||  ||||||||||||||||||||||||  |||||||| || || |||||||||
Sbjct: 872 gagcatgaccccgccgtagttgtccttcttctgcaccaccggcgtgatgccgtagtagac 813

                                                                       
Query: 236 gttcttggggtgtacccactggtaggacttgtcgtccgccgtgagcccgacgtagaaccg 295
           |||||||||||||| ||||||||| ||||| ||||| || |||||||||| | |||||||
Sbjct: 812 gttcttggggtgtatccactggtacgacttctcgtcggcggtgagcccgatgaagaaccg 753

                                                                       
Query: 296 ggtggcagggtacgccgccgtccactcgttccacgagccctcccacccaaagttctggtt 355
           |||||| ||||||||||||||||||  || |||||   |||||||| |   || ||||||
Sbjct: 752 ggtggccgggtacgccgccgtccacctgtcccacgcctcctcccacgccccgtactggtt 693

                                                                       
Query: 356 gcacccattgtcgctctc---gtatgtcctcacgtggacgcgctcgaagatccccgtcgc 412
           |||| | |||||||||||   |||  |||||||||| |||||||| ||||||||||||||
Sbjct: 692 gcacgccttgtcgctctcctcgtagatcctcacgtgcacgcgctccaagatccccgtcgc 633

                                                                       
Query: 413 cagcgcccgccccacgtgcgccgccggcgggtacccgcaccggaccgtcgccgtcaggtg 472
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 cagcgcccgccccacgtgcgccgccggcgggtacccgcaccggaccgtcgccgtcaggtg 573

                                                                       
Query: 473 cagcggcttccccggccccccgcagatgttgtgcttggccagctccagcgccagcacgtc 532
           ||||||||||||||| || |||| |||||||||||| |||||||||||||||||||||||
Sbjct: 572 cagcggcttccccgggccgccgcggatgttgtgcttcgccagctccagcgccagcacgtc 513

                    
Query: 533 gtagcggtc 541
           |||||||||
Sbjct: 512 gtagcggtc 504
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  107 bits (54), Expect = 4e-20
 Identities = 72/78 (92%)
 Strand = Plus / Plus

                                                                            
Query: 458      cgtcgccgtcaggtgcagcggcttccccggccccccgcagatgttgtgcttggccagctc 517
                |||||| |||||||||||||||||||| ||| | |||| ||||||||||||||| |||||
Sbjct: 14490283 cgtcgctgtcaggtgcagcggcttcccgggcgcgccgcggatgttgtgcttggcgagctc 14490342

                                  
Query: 518      cagcgccagcacgtcgta 535
                ||||||||||||||||||
Sbjct: 14490343 cagcgccagcacgtcgta 14490360



 Score =  101 bits (51), Expect = 2e-18
 Identities = 108/127 (85%)
 Strand = Plus / Plus

                                                                            
Query: 128      cttgatcaagctgctgtagttggtctgcttgtcgaagtaccggtcccagagcatgatgcc 187
                ||||| || |||| |||||||| || |||||||| |||| |||||||||| ||||| |||
Sbjct: 14484656 cttgaccatgctggtgtagttgctcagcttgtcgtagtatcggtcccagatcatgaagcc 14484715

                                                                            
Query: 188      gccgtagttgtccttcttctgcgacaccggcgcgacgctgtagtagacgttcttggggtg 247
                |||||||||||||  ||||||||    ||| ||||||  |||||||||||||||||||||
Sbjct: 14484716 gccgtagttgtccgccttctgcgtggacggggcgacgtcgtagtagacgttcttggggtg 14484775

                       
Query: 248      tacccac 254
                 ||||||
Sbjct: 14484776 cacccac 14484782



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 386      gtggacgcgctcgaagatccccgtcgcca 414
                ||||| |||||||||||||||||||||||
Sbjct: 14490211 gtggatgcgctcgaagatccccgtcgcca 14490239



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 285      acgtagaaccgggtggcagggtacgccgccgtc 317
                ||||||||||| || || |||||||||||||||
Sbjct: 14484813 acgtagaaccgtgtcgccgggtacgccgccgtc 14484845
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>dbj|AP004732.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0021M10
          Length = 163416

 Score =  107 bits (54), Expect = 4e-20
 Identities = 72/78 (92%)
 Strand = Plus / Plus

                                                                         
Query: 458   cgtcgccgtcaggtgcagcggcttccccggccccccgcagatgttgtgcttggccagctc 517
             |||||| |||||||||||||||||||| ||| | |||| ||||||||||||||| |||||
Sbjct: 83457 cgtcgctgtcaggtgcagcggcttcccgggcgcgccgcggatgttgtgcttggcgagctc 83516

                               
Query: 518   cagcgccagcacgtcgta 535
             ||||||||||||||||||
Sbjct: 83517 cagcgccagcacgtcgta 83534



 Score =  101 bits (51), Expect = 2e-18
 Identities = 108/127 (85%)
 Strand = Plus / Plus

                                                                         
Query: 128   cttgatcaagctgctgtagttggtctgcttgtcgaagtaccggtcccagagcatgatgcc 187
             ||||| || |||| |||||||| || |||||||| |||| |||||||||| ||||| |||
Sbjct: 77830 cttgaccatgctggtgtagttgctcagcttgtcgtagtatcggtcccagatcatgaagcc 77889

                                                                         
Query: 188   gccgtagttgtccttcttctgcgacaccggcgcgacgctgtagtagacgttcttggggtg 247
             |||||||||||||  ||||||||    ||| ||||||  |||||||||||||||||||||
Sbjct: 77890 gccgtagttgtccgccttctgcgtggacggggcgacgtcgtagtagacgttcttggggtg 77949

                    
Query: 248   tacccac 254
              ||||||
Sbjct: 77950 cacccac 77956



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 386   gtggacgcgctcgaagatccccgtcgcca 414
             ||||| |||||||||||||||||||||||
Sbjct: 83385 gtggatgcgctcgaagatccccgtcgcca 83413



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 285   acgtagaaccgggtggcagggtacgccgccgtc 317
             ||||||||||| || || |||||||||||||||
Sbjct: 77987 acgtagaaccgtgtcgccgggtacgccgccgtc 78019
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>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0022E16 map C481S, complete sequence
          Length = 179668

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                             
Query: 149   ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 196
             ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 82293 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 82246



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 155   cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 197
             ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 88121 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 88163



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 379   tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 419
             |||||||||||| |||| |||| | ||||||||||||||||
Sbjct: 64128 tcctcacgtggatgcgcgcgaacacccccgtcgccagcgcc 64088



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 157   tgtcgaagtaccggtcccagagcatgatgccgccgtagttg 197
             |||||||||  |||| |||||||| || |||||||||||||
Sbjct: 83663 tgtcgaagtgtcggttccagagcacgacgccgccgtagttg 83703



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 379   tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 419
             ||||||| |||| |||| |||| | ||||||||||||||||
Sbjct: 58277 tcctcacatggatgcgcgcgaacacccccgtcgccagcgcc 58237
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                                
Query: 149      ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 196
                ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 28123738 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 28123691



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                           
Query: 155      cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 197
                ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 28129566 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 28129608



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                         
Query: 379      tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 419
                |||||||||||| |||| |||| | ||||||||||||||||
Sbjct: 28105573 tcctcacgtggatgcgcgcgaacacccccgtcgccagcgcc 28105533



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 157      tgtcgaagtaccggtcccagagcatgatgccgccgtagttg 197
                |||||||||  |||| |||||||| || |||||||||||||
Sbjct: 28125108 tgtcgaagtgtcggttccagagcacgacgccgccgtagttg 28125148



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 379      tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 419
                ||||||| |||| |||| |||| | ||||||||||||||||
Sbjct: 28099010 tcctcacatggatgcgcgcgaacacccccgtcgccagcgcc 28098970
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>dbj|AK102862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033111J19, full
           insert sequence
          Length = 1176

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 149 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 196
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 988 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 941
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>dbj|AK063939.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-E01, full
           insert sequence
          Length = 1234

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 149 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 196
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 989 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 942
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                                
Query: 149      ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 196
                ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 28108616 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 28108569



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                           
Query: 155      cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 197
                ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 28114444 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 28114486



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                         
Query: 379      tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 419
                |||||||||||| |||| |||| | ||||||||||||||||
Sbjct: 28090451 tcctcacgtggatgcgcgcgaacacccccgtcgccagcgcc 28090411



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 157      tgtcgaagtaccggtcccagagcatgatgccgccgtagttg 197
                |||||||||  |||| |||||||| || |||||||||||||
Sbjct: 28109986 tgtcgaagtgtcggttccagagcacgacgccgccgtagttg 28110026



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 379      tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 419
                ||||||| |||| |||| |||| | ||||||||||||||||
Sbjct: 28083888 tcctcacatggatgcgcgcgaacacccccgtcgccagcgcc 28083848
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>dbj|D55712.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete
           cds
          Length = 1220

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 149 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 196
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 963 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 916
to top
>dbj|AB027420.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a),
           complete cds, clone:C60571
          Length = 1220

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 149 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 196
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 975 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 928
to top
>dbj|AB027419.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a),
           complete cds, clone:C11701
          Length = 1171

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 149 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 196
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 933 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 886
to top
>dbj|AB027418.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a),
           complete cds, clone:C12269
          Length = 1214

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 149 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 196
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 973 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 926
to top
>dbj|AB027417.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a),
           complete cds, clone:C3540
          Length = 1229

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 149 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 196
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 972 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 925
to top
>dbj|AB027416.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a),
           complete cds,clone:C10295
          Length = 1199

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 149 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 196
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 954 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 907
to top
>dbj|AB027415.1| Oryza sativa (japonica cultivar-group) mRNA for class III chitinase
           homologue (OsChib3H-a)H-, complete cds, clone:C60129
          Length = 1187

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 149 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 196
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 957 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 910
to top
>dbj|AK102649.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101A20, full
           insert sequence
          Length = 1162

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 155 cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 197
           ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 927 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 885
to top
>dbj|AK101155.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027E14, full
           insert sequence
          Length = 1193

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 155 cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 197
           ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 931 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 889
to top
>dbj|AK073595.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048M21, full
           insert sequence
          Length = 1153

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 155 cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 197
           ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 918 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 876
to top
>dbj|AK106319.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-E05, full
           insert sequence
          Length = 1076

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 379 tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 419
           |||||||||||| |||| |||| | ||||||||||||||||
Sbjct: 695 tcctcacgtggatgcgcgcgaacacccccgtcgccagcgcc 655
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>dbj|D55710.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete
           cds
          Length = 1145

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 379 tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 419
           |||||||||||| |||| |||| | ||||||||||||||||
Sbjct: 673 tcctcacgtggatgcgcgcgaacacccccgtcgccagcgcc 633
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>ref|NM_193094.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 951

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 151 tctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagttgtccttcttctgcg 210
           |||||||||||  ||| || ||||||| ||||| ||||||||||||| ||  ||||||| 
Sbjct: 916 tctgcttgtcgctgtagcgatcccagatcatgaagccgccgtagttggccgccttctgca 857

                   
Query: 211 acaccggc 218
           || |||||
Sbjct: 856 actccggc 849



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 383 cacgtggacgcgctcgaagatccccgtcgccagcgcccgc 422
           |||||||||||||||||||   ||||| || |||||||||
Sbjct: 654 cacgtggacgcgctcgaaggcgcccgtggcgagcgcccgc 615
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                            
Query: 151      tctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagttgtccttcttctgcg 210
                |||||||||||  ||| || ||||||| ||||| ||||||||||||| ||  ||||||| 
Sbjct: 26162477 tctgcttgtcgctgtagcgatcccagatcatgaagccgccgtagttggccgccttctgca 26162418

                        
Query: 211      acaccggc 218
                || |||||
Sbjct: 26162417 actccggc 26162410



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                        
Query: 383      cacgtggacgcgctcgaagatccccgtcgccagcgcccgc 422
                |||||||||||||||||||   ||||| || |||||||||
Sbjct: 26162215 cacgtggacgcgctcgaaggcgcccgtggcgagcgcccgc 26162176
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>dbj|AK111717.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022A01, full
           insert sequence
          Length = 1165

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 151 tctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagttgtccttcttctgcg 210
           |||||||||||  ||| || ||||||| ||||| ||||||||||||| ||  ||||||| 
Sbjct: 964 tctgcttgtcgctgtagcgatcccagatcatgaagccgccgtagttggccgccttctgca 905

                   
Query: 211 acaccggc 218
           || |||||
Sbjct: 904 actccggc 897



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 383 cacgtggacgcgctcgaagatccccgtcgccagcgcccgc 422
           |||||||||||||||||||   ||||| || |||||||||
Sbjct: 702 cacgtggacgcgctcgaaggcgcccgtggcgagcgcccgc 663
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>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0519E12
          Length = 152448

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                         
Query: 151   tctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagttgtccttcttctgcg 210
             |||||||||||  ||| || ||||||| ||||| ||||||||||||| ||  ||||||| 
Sbjct: 54335 tctgcttgtcgctgtagcgatcccagatcatgaagccgccgtagttggccgccttctgca 54276

                     
Query: 211   acaccggc 218
             || |||||
Sbjct: 54275 actccggc 54268



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 383   cacgtggacgcgctcgaagatccccgtcgccagcgcccgc 422
             |||||||||||||||||||   ||||| || |||||||||
Sbjct: 54073 cacgtggacgcgctcgaaggcgcccgtggcgagcgcccgc 54034
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 516     tccagcgccagcacgtcgtagc 537
               ||||||||||||||||||||||
Sbjct: 2513089 tccagcgccagcacgtcgtagc 2513068
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>ref|XM_792322.1| PREDICTED: Strongylocentrotus purpuratus similar to putative
           endoplasmic reticulum protein, with at least 5
           transmembrane domains, of eukaryotic origin (56.3 kD)
           (4P439) (LOC592817), mRNA
          Length = 1917

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 138 ctgctgtagttggtctgcttgt 159
           ||||||||||||||||||||||
Sbjct: 86  ctgctgtagttggtctgcttgt 107
to top
>gb|S82314.1| PRm 3=chitinase {clone CHEM 5} [Zea mays=maize, cv. INRA 258,
           mercuric chloride-treated, leaves, mRNA Partial, 945 nt]
          Length = 945

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 168 cggtcccagagcatgatgccgccgtagttg 197
           |||||||| | |||||||||||||||||||
Sbjct: 870 cggtcccacaccatgatgccgccgtagttg 841
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>gb|AY107125.1| Zea mays PCO125117 mRNA sequence
          Length = 1252

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 168 cggtcccagagcatgatgccgccgtagttg 197
           |||||||| | |||||||||||||||||||
Sbjct: 928 cggtcccacaccatgatgccgccgtagttg 899
to top
>gb|AF440523.1| Pseudomonas aeruginosa strain C genomic sequence, gene island PAGI-2(C)
          Length = 158230

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 516    tccagcgccagcacgtcgtagc 537
              ||||||||||||||||||||||
Sbjct: 127784 tccagcgccagcacgtcgtagc 127805
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 398    gaagatccccgtcgccagcgc 418
              |||||||||||||||||||||
Sbjct: 765298 gaagatccccgtcgccagcgc 765318
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 9       attattatttttatttatcca 29
               |||||||||||||||||||||
Sbjct: 9296566 attattatttttatttatcca 9296586
to top
>ref|XM_754996.1| Ustilago maydis 521 hypothetical protein (UM03942.1) partial mRNA
          Length = 4143

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 501  ttgtgcttggccagctccagcgcca 525
            ||||||||||||||||| |||||||
Sbjct: 3083 ttgtgcttggccagctcgagcgcca 3059
to top
>emb|CR661974.2|CNS0F9R0 Tetraodon nigroviridis full-length cDNA
          Length = 1323

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 11   tattatttttatttatccaag 31
            |||||||||||||||||||||
Sbjct: 1059 tattatttttatttatccaag 1079
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>emb|AL590608.6| Human DNA sequence from clone RP11-363F12 on chromosome 6, complete
             sequence
          Length = 200337

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 9     attattatttttatttatcca 29
             |||||||||||||||||||||
Sbjct: 75724 attattatttttatttatcca 75704
to top
>emb|CR378665.1| Photobacterium profundum SS9; segment 3/12
          Length = 347213

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 9     attattatttttatttatcca 29
             |||||||||||||||||||||
Sbjct: 55388 attattatttttatttatcca 55368
to top
>emb|AJ297529.2|PST297529 Pseudomonas stutzeri nif operon and flanking genes, strain A15101
          Length = 24798

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 497  gatgttgtgcttggccagctc 517
            |||||||||||||||||||||
Sbjct: 5350 gatgttgtgcttggccagctc 5370
to top
>gb|AC129928.3| Homo sapiens chromosome 8, clone RP11-1112C19, complete sequence
          Length = 141478

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 7      caattattatttttatttatc 27
              |||||||||||||||||||||
Sbjct: 106374 caattattatttttatttatc 106394
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>emb|BX950184.7| Zebrafish DNA sequence from clone CH211-103O12 in linkage group 12,
             complete sequence
          Length = 150475

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 2     ttgttcaattattatttttat 22
             |||||||||||||||||||||
Sbjct: 97243 ttgttcaattattatttttat 97223
to top
>emb|BX537141.17| Zebrafish DNA sequence from clone DKEY-9E8 in linkage group 2, complete
              sequence
          Length = 264534

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 9      attattatttttatttatccaagta 33
              |||||||||||||||||| ||||||
Sbjct: 242608 attattatttttatttattcaagta 242584
to top
>emb|BX119984.15| Zebrafish DNA sequence from clone DKEY-257N17 in linkage group 1,
             complete sequence
          Length = 163978

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 2     ttgttcaattattatttttat 22
             |||||||||||||||||||||
Sbjct: 15730 ttgttcaattattatttttat 15750
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 9       attattatttttatttatcca 29
               |||||||||||||||||||||
Sbjct: 9294399 attattatttttatttatcca 9294419
to top
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 513    agctccagcgccagcacgtcgtagc 537
              ||||||||||||| |||||||||||
Sbjct: 772325 agctccagcgccatcacgtcgtagc 772349
to top
>gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0014A21, from chromosome 3, complete sequence
          Length = 134014

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 9     attattatttttatttatcca 29
             |||||||||||||||||||||
Sbjct: 59687 attattatttttatttatcca 59667
to top
>dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome
          Length = 1584804

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 5      ttcaattattatttttattta 25
              |||||||||||||||||||||
Sbjct: 956438 ttcaattattatttttattta 956458
to top
>dbj|BS000117.1| Pan troglodytes chromosome 22 clone:RP43-027E03, map 22, complete
             sequences
          Length = 155641

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 6     tcaattattatttttatttat 26
             |||||||||||||||||||||
Sbjct: 82472 tcaattattatttttatttat 82492
to top
>dbj|AB063285.1| Homo sapiens HLCS gene for holocarboxylase synthetase, complete cds
          Length = 250000

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 6      tcaattattatttttatttat 26
              |||||||||||||||||||||
Sbjct: 217230 tcaattattatttttatttat 217210
to top
>dbj|AK102731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105P15, full
           insert sequence
          Length = 1008

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 379 tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 419
           ||||||| |||| |||| |||| | ||||||||||||||||
Sbjct: 612 tcctcacatggatgcgcgcgaacacccccgtcgccagcgcc 572
to top
>dbj|AK064356.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-B03, full
           insert sequence
          Length = 1150

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 379 tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 419
           ||||||| |||| |||| |||| | ||||||||||||||||
Sbjct: 659 tcctcacatggatgcgcgcgaacacccccgtcgccagcgcc 619
to top
>dbj|AK064281.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-G04, full
           insert sequence
          Length = 1161

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 157 tgtcgaagtaccggtcccagagcatgatgccgccgtagttg 197
           |||||||||  |||| |||||||| || |||||||||||||
Sbjct: 940 tgtcgaagtgtcggttccagagcacgacgccgccgtagttg 900
to top
>emb|AL929231.3| Zebrafish DNA sequence from clone BUSM1-46P4, complete sequence
          Length = 85305

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 2     ttgttcaattattatttttat 22
             |||||||||||||||||||||
Sbjct: 73279 ttgttcaattattatttttat 73299
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>emb|AL928816.2| Zebrafish DNA sequence from clone BUSM1-265N4, complete sequence
          Length = 98918

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 2     ttgttcaattattatttttat 22
             |||||||||||||||||||||
Sbjct: 33613 ttgttcaattattatttttat 33633
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>dbj|AP001726.1| Homo sapiens genomic DNA, chromosome 21q, section 70/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 6      tcaattattatttttatttat 26
              |||||||||||||||||||||
Sbjct: 335682 tcaattattatttttatttat 335702
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>dbj|AP005362.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1574E2, complete
              sequence
          Length = 219049

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 7      caattattatttttatttatc 27
              |||||||||||||||||||||
Sbjct: 147526 caattattatttttatttatc 147506
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>dbj|AP000698.1| Homo sapiens genomic DNA, chromosome 21q22.2, cosmid clone:D8F6,
             CBR1-HLCS region
          Length = 39159

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 6     tcaattattatttttatttat 26
             |||||||||||||||||||||
Sbjct: 21346 tcaattattatttttatttat 21366
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>ref|NM_188421.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 570

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 513 agctccagcgccagcacgtcgtag 536
           ||||||||||||||| ||||||||
Sbjct: 152 agctccagcgccagcccgtcgtag 129
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>gb|AC104270.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1037_G10,
             complete sequence
          Length = 181130

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 384   acgtggacgcgctcgaagatccccgtcgccagcgcc 419
             ||||||| ||| | ||||| ||||||||||||||||
Sbjct: 94040 acgtggatgcggtggaagagccccgtcgccagcgcc 94005



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 384   acgtggacgcgctcgaagatccccgtcgccagcgcc 419
             ||||||| ||| | ||||| ||||||||||||||||
Sbjct: 71656 acgtggatgcggtggaagagccccgtcgccagcgcc 71621
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>gb|AC150651.3| Bos taurus  BAC CH240-451E16 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 174648

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 9     attattatttttatttatccaagt 32
             |||||||||||||||||| |||||
Sbjct: 12410 attattatttttatttattcaagt 12387
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>ref|XM_323898.1| Neurospora crassa OR74A hypothetical protein (NCU04546.1) partial
            mRNA
          Length = 1638

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 406  ccgtcgccagcgcccgcccc 425
            ||||||||||||||||||||
Sbjct: 1232 ccgtcgccagcgcccgcccc 1251
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>ref|XM_950893.1| Neurospora crassa OR74A hypothetical protein (NCU04546.1) partial
            mRNA
          Length = 1638

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 406  ccgtcgccagcgcccgcccc 425
            ||||||||||||||||||||
Sbjct: 1232 ccgtcgccagcgcccgcccc 1251
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>gb|AC159638.2| Mus musculus BAC clone RP24-78C16 from chromosome 12, complete sequence
          Length = 190196

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     ttcaattattatttttattt 24
             ||||||||||||||||||||
Sbjct: 37564 ttcaattattatttttattt 37545
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>gb|AC185956.1| Populus trichocarpa clone Pop1-93N08, complete sequence
          Length = 73786

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     aattattatttttatttatc 27
             ||||||||||||||||||||
Sbjct: 35552 aattattatttttatttatc 35533
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 508     tggccagctccagcgccagc 527
               ||||||||||||||||||||
Sbjct: 1671199 tggccagctccagcgccagc 1671218
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>emb|CR318625.10| Zebrafish DNA sequence from clone DKEY-119A7 in linkage group 17,
              complete sequence
          Length = 142057

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 5      ttcaattattatttttattt 24
              ||||||||||||||||||||
Sbjct: 125089 ttcaattattatttttattt 125070
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>emb|CR388121.11| Zebrafish DNA sequence from clone DKEY-161F5 in linkage group 15,
             complete sequence
          Length = 179357

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    ttattatttttatttatcca 29
             ||||||||||||||||||||
Sbjct: 12184 ttattatttttatttatcca 12165
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>ref|XM_733178.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000260.02.0)
           partial mRNA
          Length = 234

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 8   aattattatttttatttatc 27
           ||||||||||||||||||||
Sbjct: 232 aattattatttttatttatc 213
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>ref|XM_739283.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000521.03.0)
           partial mRNA
          Length = 471

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 3   tgttcaattattatttttatttat 26
           |||| |||||||||||||||||||
Sbjct: 156 tgttaaattattatttttatttat 133
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>gb|AC121238.17| Medicago truncatula clone mth2-34p9, complete sequence
          Length = 104878

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     attattatttttatttatcc 28
             ||||||||||||||||||||
Sbjct: 98119 attattatttttatttatcc 98138
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>emb|CR762396.8| Zebrafish DNA sequence from clone DKEY-262O12 in linkage group 1,
              complete sequence
          Length = 163635

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      ttcaattattatttttattt 24
              ||||||||||||||||||||
Sbjct: 118265 ttcaattattatttttattt 118284
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>emb|AL591503.9| Human DNA sequence from clone RP11-571E6 on chromosome Xp11.22-11.3
              Contains a nicolin 1 (NICN1) pseudogene, a novel gene, the
              5'end of the ZNF157 gene for zinc finger protein 157
              (HZF22) and a UBX domain containing 2 (UBXD2) pseudogene,
              complete sequence
          Length = 152659

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      caattattatttttatttat 26
              ||||||||||||||||||||
Sbjct: 121322 caattattatttttatttat 121341
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>emb|BX855620.10| Zebrafish DNA sequence from clone DKEY-9M4 in linkage group 15,
             complete sequence
          Length = 33169

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     aattattatttttatttatc 27
             ||||||||||||||||||||
Sbjct: 19986 aattattatttttatttatc 19967
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>emb|CR382398.1| Plasmodium falciparum chromosome 6, complete sequence; segment 1/5
          Length = 349418

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      ttcaattattatttttattt 24
              ||||||||||||||||||||
Sbjct: 132191 ttcaattattatttttattt 132210
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>emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete genome; segment 2/16
          Length = 347786

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 510    gccagctccagcgccagcac 529
              ||||||||||||||||||||
Sbjct: 336027 gccagctccagcgccagcac 336008
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>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14
          Length = 349146

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 510    gccagctccagcgccagcac 529
              ||||||||||||||||||||
Sbjct: 334112 gccagctccagcgccagcac 334093
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>emb|AL845544.11| Zebrafish DNA sequence from clone BUSM1-133F4 in linkage group 7
             Contains three CpG islands, complete sequence
          Length = 110786

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    caatacatcagaatcaaatc 80
             ||||||||||||||||||||
Sbjct: 43424 caatacatcagaatcaaatc 43405
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>emb|BX569788.6| Zebrafish DNA sequence from clone CH211-161N19 in linkage group 10,
             complete sequence
          Length = 162115

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     tcaattattatttttattta 25
             ||||||||||||||||||||
Sbjct: 25547 tcaattattatttttattta 25566
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>gb|AC104137.5| Homo sapiens BAC clone RP11-807H7 from 4, complete sequence
          Length = 195930

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      aattattatttttatttatc 27
              ||||||||||||||||||||
Sbjct: 126479 aattattatttttatttatc 126460
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>gb|AF465311.1| Dictyostelium discoideum ABC transporter ABCA.9 (abca9) gene, partial
            cds
          Length = 4234

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    ttcaattattatttttattt 24
            ||||||||||||||||||||
Sbjct: 4043 ttcaattattatttttattt 4024
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>gb|AC154693.2| Mus musculus BAC clone RP24-340P22 from chromosome 14, complete
             sequence
          Length = 182996

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 8     aattattatttttatttatccaagtaca 35
             |||||||||||||| || ||||||||||
Sbjct: 98061 aattattatttttaattttccaagtaca 98088
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 406      ccgtcgccagcgcccgcccc 425
                ||||||||||||||||||||
Sbjct: 20419457 ccgtcgccagcgcccgcccc 20419438
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 384     acgtggacgcgctcgaagatccccgtcgccagcgcc 419
               ||||||| ||| | ||||| ||||||||||||||||
Sbjct: 8882115 acgtggatgcggtggaagagccccgtcgccagcgcc 8882080



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 384     acgtggacgcgctcgaagatccccgtcgccagcgcc 419
               ||||||| ||| | ||||| ||||||||||||||||
Sbjct: 8859731 acgtggatgcggtggaagagccccgtcgccagcgcc 8859696
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 513     agctccagcgccagcacgtcgtag 536
               ||||||||||||||| ||||||||
Sbjct: 6182543 agctccagcgccagcccgtcgtag 6182566
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>dbj|AP005645.1| Streptomyces avermitilis MA-4680 plasmid SAP1 DNA, complete sequence
          Length = 94287

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 176   gagcatgatgccgccgtagttgtccttc 203
             ||||||||||| |||| |||||||||||
Sbjct: 66383 gagcatgatgcggccggagttgtccttc 66356
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>dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0038J17
          Length = 180186

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 513   agctccagcgccagcacgtcgtag 536
             ||||||||||||||| ||||||||
Sbjct: 44741 agctccagcgccagcccgtcgtag 44764
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 204     ttctgcgacaccggcgcgac 223
               ||||||||||||||||||||
Sbjct: 5735197 ttctgcgacaccggcgcgac 5735178
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>dbj|AP005682.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1531_B07
          Length = 115245

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   ccgtcgccagcgcccgcccc 425
             ||||||||||||||||||||
Sbjct: 47596 ccgtcgccagcgcccgcccc 47577
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>dbj|AK073843.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068H05, full
           insert sequence
          Length = 1152

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 384 acgtggacgcgctcgaagatccccgtcgccagcgcc 419
           ||||||| ||| | ||||| ||||||||||||||||
Sbjct: 682 acgtggatgcggtggaagagccccgtcgccagcgcc 647
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>dbj|AK070219.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043K12, full
           insert sequence
          Length = 2098

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 406 ccgtcgccagcgcccgcccc 425
           ||||||||||||||||||||
Sbjct: 233 ccgtcgccagcgcccgcccc 252
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>emb|BX901933.15| Zebrafish DNA sequence from clone DKEY-114H6 in linkage group 22,
             complete sequence
          Length = 42656

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 10    ttattatttttatttatccaagta 33
             ||||||||||| ||||||||||||
Sbjct: 17692 ttattatttttttttatccaagta 17715
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>emb|CR391947.13| Zebrafish DNA sequence from clone DKEYP-88A4 in linkage group 1, complete
              sequence
          Length = 167207

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      ttcaattattatttttattt 24
              ||||||||||||||||||||
Sbjct: 137407 ttcaattattatttttattt 137426
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>gb|AC079959.25| Mus musculus strain C57BL/6J chromosome 12 clone rp23-327i21, complete
             sequence
          Length = 218889

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     ttcaattattatttttattt 24
             ||||||||||||||||||||
Sbjct: 18723 ttcaattattatttttattt 18742
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>emb|BX927330.9| Zebrafish DNA sequence from clone DKEY-43B14 in linkage group 2,
             complete sequence
          Length = 203149

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     aattattatttttatttatc 27
             ||||||||||||||||||||
Sbjct: 33340 aattattatttttatttatc 33321
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>dbj|AK115302.1| Ciona intestinalis cDNA, clone:cieg043h05, full insert sequence
          Length = 1707

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 2    ttgttcaattattattttta 21
            ||||||||||||||||||||
Sbjct: 1635 ttgttcaattattattttta 1654
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>gb|AC160641.2| Ornithorhynchus anatinus BAC clone OABb-469P24 from chromosome unknown,
             complete sequence
          Length = 128941

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 12    attatttttatttatccaagtaca 35
             ||||| ||||||||||||||||||
Sbjct: 66721 attatctttatttatccaagtaca 66744
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>gb|AC004062.1|AC004062 Homo sapiens chromosome 4 clone B316M24 map 4q25, complete sequence
          Length = 154252

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     ttcaattattatttttattt 24
             ||||||||||||||||||||
Sbjct: 20307 ttcaattattatttttattt 20288
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 401     gatccccgtcgccagcgccc 420
               ||||||||||||||||||||
Sbjct: 1274939 gatccccgtcgccagcgccc 1274920
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>emb|BX088567.6| Mouse DNA sequence from clone RP23-21L20 on chromosome X, complete
             sequence
          Length = 150122

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    ttattatttttatttatcca 29
             ||||||||||||||||||||
Sbjct: 84264 ttattatttttatttatcca 84245


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,617,892
Number of Sequences: 3902068
Number of extensions: 4617892
Number of successful extensions: 161086
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 160000
Number of HSP's gapped (non-prelim): 1082
length of query: 541
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 518
effective length of database: 17,143,297,704
effective search space: 8880228210672
effective search space used: 8880228210672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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