ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart10a12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Clas... 67 1e-11
2XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Clas... 52 3e-07
3XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Clas... 46 2e-05
4CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (E... 40 0.001
5CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14) 39 0.002
6CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14) 38 0.006
7CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14) 35 0.036
8CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14) 35 0.047
9CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14) 33 0.14
10CONB_CANEN (P49347) Concanavalin B precursor (Con B) 32 0.52
11HIS8_GEOMG (Q39YP6) Histidinol-phosphate aminotransferase (EC 2.... 30 1.5
12CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1... 29 3.4
13CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14) 29 3.4
14VGLE_VZVD (P09259) Glycoprotein E precursor (Glycoprotein GI) 29 3.4
15CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14) 28 4.4
16MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia p... 28 4.4
17KNH1_CANGA (O74684) Cell wall synthesis protein KNH1 precursor 28 5.7
18LDLR1_XENLA (Q99087) Low-density lipoprotein receptor 1 precurso... 27 9.8
19APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 27 9.8

>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III|
           chitinase homolog) (XIP-I protein)
          Length = 304

 Score = 67.0 bits (162), Expect = 1e-11
 Identities = 28/46 (60%), Positives = 36/46 (78%)
 Frame = -2

Query: 326 ASEQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           A ++   +VHPKN+YYGV  V QK  NYGG+M+W+RY DK+TNYSS
Sbjct: 253 ADDKSHQWVHPKNVYYGVAPVAQKKDNYGGIMLWDRYFDKQTNYSS 298



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>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III|
           chitinase homolog a) (RIXI protein)
          Length = 304

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 21/41 (51%), Positives = 28/41 (68%)
 Frame = -2

Query: 293 KNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSSYAIQWA 171
           K LYY ++  VQKA NYGG+M+W+R+ DK+T Y      WA
Sbjct: 264 KQLYYDLLPNVQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304



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>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III|
           chitinase homolog h)
          Length = 290

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 18/43 (41%), Positives = 30/43 (69%)
 Frame = -2

Query: 320 EQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYS 192
           EQ   ++  K+LYY ++Q V+   NYGG+ +++RY DK+ NY+
Sbjct: 245 EQDSAWMFQKDLYYEMLQFVRSLPNYGGLAIYDRYFDKKANYT 287



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>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);|
           Lysozyme (EC 3.2.1.17)]
          Length = 311

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = -2

Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           GYV P  L   ++  ++K+  YGGVM+W ++ D +  YSS
Sbjct: 254 GYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSS 293



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>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 302

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = -2

Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           GY+ P  L   ++  ++K+  YGGVM+W ++ D +  YSS
Sbjct: 257 GYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSS 296



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>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 301

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = -2

Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           G++    L   ++ V++++  YGGVM+W +Y D ++ YSS
Sbjct: 256 GFIPANVLTSQILPVIKRSPKYGGVMLWSKYYDDQSGYSS 295



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>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 298

 Score = 35.4 bits (80), Expect = 0.036
 Identities = 14/43 (32%), Positives = 26/43 (60%)
 Frame = -2

Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSSYAI 180
           G++    L   V+  ++ ++ YGGVM+W+R+ D ++ YS   I
Sbjct: 253 GFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDGQSGYSGAII 295



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>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 293

 Score = 35.0 bits (79), Expect = 0.047
 Identities = 11/29 (37%), Positives = 21/29 (72%)
 Frame = -2

Query: 275 VIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           V+  ++ +  YGGVM+W+R+ D ++ YS+
Sbjct: 259 VLPAIKTSPKYGGVMIWDRFNDAQSGYSN 287



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>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)|
          Length = 294

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -2

Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           GY+  + L   V+  ++ ++ YGGVM+W R  D +  YSS
Sbjct: 249 GYIPKQVLMSQVLPFLKGSSKYGGVMLWNRKFDVQCGYSS 288



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>CONB_CANEN (P49347) Concanavalin B precursor (Con B)|
          Length = 324

 Score = 31.6 bits (70), Expect = 0.52
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = -2

Query: 329 PASEQKV---GYVHPKNLYYGVIQVVQKA-ANYGGVMVWERYEDKRTNYSSYAIQW 174
           PAS+      GY+ P  L   V+  +      Y G+ +W R  DK T YS+  I++
Sbjct: 252 PASQATAPGGGYIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNIIRY 307



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>HIS8_GEOMG (Q39YP6) Histidinol-phosphate aminotransferase (EC 2.6.1.9)|
           (Imidazole acetol-phosphate transaminase)
          Length = 350

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 326 ASEQKVGYVHPKNLYYGVIQVVQKA 252
           A  +++GYVHP   YYG +  VQ A
Sbjct: 102 AEGEEIGYVHPSYSYYGTLAEVQGA 126



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>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)|
          Length = 293

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -2

Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           G++    L   V+  ++ +A YGGVM+W +  D  + YSS
Sbjct: 250 GFIPADALTSQVLPTIKGSAKYGGVMLWSKAYD--SGYSS 287



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>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 292

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -2

Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERYED 210
           G++    L   V+  ++ ++NYGGVM+W +  D
Sbjct: 248 GFIPADVLISQVLPTIKASSNYGGVMLWSKAFD 280



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>VGLE_VZVD (P09259) Glycoprotein E precursor (Glycoprotein GI)|
          Length = 623

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -2

Query: 296 PKNLYYGVIQVVQKAANYGGVMVWE-RYEDKRTNYSSYAIQW 174
           P  +  GV++V++    Y GV +W  R  D  + Y+++ + W
Sbjct: 278 PPEIEPGVLKVLRTEKQYLGVYIWNMRGSDGTSTYATFLVTW 319



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>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 291

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           G++    L   V+ ++  +  YGGVM+W ++ D    YSS
Sbjct: 248 GFIPSDVLVSQVLPLINGSPKYGGVMLWSKFYD--NGYSS 285



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>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2|
            (ALL1-related protein)
          Length = 5262

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = -1

Query: 303  RSSKEPLLRRHTGGAEGGQLWRGHGLGTLRGQADKLQQL 187
            RSS  P  RR  GGA GG   RG G   L+  A  ++ L
Sbjct: 1029 RSSSFPGRRRPRGGAHGG---RGRGRARLKSTASSIETL 1064



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>KNH1_CANGA (O74684) Cell wall synthesis protein KNH1 precursor|
          Length = 265

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = -3

Query: 289 TFITASYRWCRRRPTMAGSWFGNVTRTSGQITAVTP 182
           T ITA+  W RR  T A S+F ++T T  Q T +TP
Sbjct: 180 TKITAT-TWSRRYATSAVSFFTSLTATPVQHTTLTP 214



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>LDLR1_XENLA (Q99087) Low-density lipoprotein receptor 1 precursor (LDL receptor|
           1)
          Length = 909

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -2

Query: 299 HPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTN 198
           HP  LY  +  V+     +GG +VW+ +  K TN
Sbjct: 834 HPTALYIVLPIVILCLVAFGGFLVWKNWRLKNTN 867



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 203 SACPRNVPKP*PRHSWPPSAPP 268
           S CP   PKP P+   PP+ PP
Sbjct: 106 SPCPSPPPKPQPKPVPPPACPP 127


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,455,151
Number of Sequences: 219361
Number of extensions: 885952
Number of successful extensions: 2767
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2764
length of database: 80,573,946
effective HSP length: 85
effective length of database: 61,928,261
effective search space used: 1486278264
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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