ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart09h10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1M3K12_MOUSE (Q60700) Mitogen-activated protein kinase kinase kin... 29 6.0
2M3K12_HUMAN (Q12852) Mitogen-activated protein kinase kinase kin... 28 7.9

>M3K12_MOUSE (Q60700) Mitogen-activated protein kinase kinase kinase 12 (EC|
           2.7.11.25) (Mixed lineage kinase) (Leucine-zipper
           protein kinase) (ZPK) (Dual leucine zipper bearing
           kinase) (DLK) (MAPK-upstream kinase) (MUK)
          Length = 888

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +1

Query: 322 PPACFLPEKLLVESTSRSTTKGNGGHRSGGRFLTPFTL 435
           PP     E + +  T R  T G GG+R+G + LTP  L
Sbjct: 699 PPPVGPGEGVGLLGTGREGTAGRGGNRAGSQHLTPAAL 736



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>M3K12_HUMAN (Q12852) Mitogen-activated protein kinase kinase kinase 12 (EC|
           2.7.11.25) (Mixed lineage kinase) (Leucine-zipper
           protein kinase) (ZPK) (Dual leucine zipper bearing
           kinase) (DLK) (MAPK-upstream kinase) (MUK)
          Length = 859

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +1

Query: 322 PPACFLPEKLLVESTSRSTTKGNGGHRSGGRFLTPFTL 435
           PP     E + +  T R  T G GG R+G + LTP  L
Sbjct: 666 PPPVGPGEGVGLLGTGREGTSGRGGSRAGSQHLTPAAL 703


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,730,042
Number of Sequences: 219361
Number of extensions: 935944
Number of successful extensions: 2702
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2702
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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