ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart09h10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ279927.1| Human herpesvirus 4 strain AG876, complete genome 46 0.097
2emb|V01555.2|EBV Epstein-Barr virus (EBV) genome, strain B95-8 46 0.097
3emb|AJ507799.2|HHV507799 Human herpesvirus 4 complete wild type ... 46 0.097
4gb|M80517.1|HS4B958RAJ Epstein-Barr virus, artifactual joining o... 46 0.097
5gb|M11923.1|HS4BAM Epstein-Barr virus B95-8, BamHI F region 46 0.097
6gb|AC150430.3| Branchiostoma floridae clone CH302-99K22, complet... 44 0.39
7gb|AF165118.1|AF165118 Mus musculus anti-DNP IgM heavy chain var... 44 0.39
8gb|AF240177.1|AF240177 Mus musculus MRP14 mRNA 44 0.39
9gb|AF240168.1|AF240168 Mus musculus MRP5 mRNA, partial cds 44 0.39
10gb|L14364.1|MUSIGHVMA Mus musculus germline Ig H-chain gene, V r... 44 0.39
11emb|AM084333.1| Mus musculus chromosome 12 Igh-C and proximal Ig... 44 0.39
12gb|AF045023.1|AF045023 Mus musculus anti-human ovarian carcinoma... 44 0.39
13emb|AJ972403.2| Mus musculus chromosome 12 BAC clone 4k8 44 0.39
14emb|AJ972404.2| Mus musculus chromosome 12 BAC clone 4k8 44 0.39
15gb|M19900.1|MUSIGHAAD Mouse Ig rearranged gamma-chain mRNA, clon... 44 0.39
16gb|AC011850.12| Homo sapiens chromosome 15, clone RP11-364J18, c... 42 1.5
17gb|AC168149.7| Medicago truncatula clone mth2-84g4, complete seq... 40 6.0
18gb|AF146601.3| Aeromonas hydrophila clone F121-126 putative rfbN... 40 6.0
19gb|AY607038.1| Blastoceros dichotomus cytochrome b gene, complet... 40 6.0
20gb|AC154861.2| Mus musculus BAC clone RP23-8E13 from chromosome ... 40 6.0
21gb|AC120364.7| Mus musculus chromosome 8, clone RP24-291F20, com... 40 6.0
22gb|AC111059.9| Mus musculus chromosome 15, clone RP24-495D8, com... 40 6.0
23gb|AC166244.4| Mus musculus chromosome 15, clone RP24-403A9, com... 40 6.0
24gb|AC140209.2| Mus musculus BAC clone RP24-472D23 from chromosom... 40 6.0
25gb|AC158385.4| Mus musculus chromosome 8, clone RP24-247P24, com... 40 6.0
26gb|AC165106.5| Mus musculus chromosome 15, clone CH25-352G9, com... 40 6.0
27gb|AC153594.15| Mus musculus 10 BAC RP23-98N14 (Roswell Park Can... 40 6.0
28gb|AF202897.1| Homo sapiens prostate and colon associated protei... 40 6.0
29gb|AC132324.3| Mus musculus BAC clone RP24-270C24 from chromosom... 40 6.0
30gb|AC122475.2| Mus musculus BAC clone RP24-334J11 from chromosom... 40 6.0
31emb|CR701121.2|CNS0G3XP Tetraodon nigroviridis full-length cDNA 40 6.0
32emb|CR689157.1|CNS0FUPD Tetraodon nigroviridis full-length cDNA 40 6.0
33emb|CR662459.2|CNS0FA4H Tetraodon nigroviridis full-length cDNA 40 6.0
34gb|AC092690.2| Caenorhabditis elegans cosmid BE0003N10, complete... 40 6.0
35gb|BC071648.1| Homo sapiens cDNA clone IMAGE:5243465, **** WARNI... 40 6.0
36ref|NM_001025253.1| Homo sapiens tumor protein D52 (TPD52), tran... 40 6.0
37ref|NM_005079.2| Homo sapiens tumor protein D52 (TPD52), transcr... 40 6.0
38ref|NM_001025252.1| Homo sapiens tumor protein D52 (TPD52), tran... 40 6.0
39emb|BX248398.9| Human DNA sequence from clone RP6-137J22 on chro... 40 6.0
40emb|AL365367.10| Human DNA sequence from clone RP4-736C13 on chr... 40 6.0
41emb|AL691471.3| Human DNA sequence from clone RP11-91G11 on chro... 40 6.0
42emb|AL592284.10| Human DNA sequence from clone RP11-640M9 on chr... 40 6.0
43gb|AE008708.1| Salmonella typhimurium LT2, section 16 of 220 of ... 40 6.0
44emb|AJ320483.1|SEN320483 Salmonella enterica subsp. enterica ser... 40 6.0
45emb|AL672225.15| Mouse DNA sequence from clone RP23-384G1 on chr... 40 6.0
46emb|AL773510.5| Mouse DNA sequence from clone RP24-200F10 on chr... 40 6.0
47emb|BX640835.1|HSM806947 Homo sapiens mRNA; cDNA DKFZp686E24213 ... 40 6.0
48gb|AC149127.6| Medicago truncatula clone mth2-108o17, complete s... 40 6.0
49dbj|AK057075.1| Homo sapiens cDNA FLJ32513 fis, clone SMINT10000... 40 6.0
50emb|CR591025.1| full-length cDNA clone CS0DG001YK02 of B cells (... 40 6.0
51dbj|AK000992.1| Homo sapiens cDNA FLJ10130 fis, clone HEMBA1003035 40 6.0
52gb|AC096745.2| Homo sapiens BAC clone RP11-358D17 from 4, comple... 40 6.0
53ref|XM_680046.1| PREDICTED: Danio rerio similar to RNA polymeras... 40 6.0
54gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome 40 6.0
55gb|S82081.1| N8=tumor expression-enhanced gene [human, NCI H-69 ... 40 6.0
56dbj|AK053385.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 40 6.0
57gb|AC108858.16| Mus musculus chromosome 15, clone RP24-390C21, c... 40 6.0
58gb|AF326256.1|AF326256 Eospalax baileyi isolate 2 cytochrome b (... 40 6.0
59gb|AF326255.1|AF326255 Eospalax baileyi isolate 1 cytochrome b (... 40 6.0
60gb|AC157095.9| Mus musculus 6 BAC RP24-350P11 (Roswell Park Canc... 40 6.0
61gb|AC011743.9| Homo sapiens BAC clone RP11-299O14 from 2, comple... 40 6.0
62gb|AC011238.8| Homo sapiens BAC clone RP11-374C5 from 2, complet... 40 6.0
63gb|AC129664.7| Homo sapiens BAC clone RP11-237A9 from 4, complet... 40 6.0
64gb|AC127385.6| Homo sapiens BAC clone RP13-489M19 from 4, comple... 40 6.0
65gb|AC009686.14| Homo sapiens chromosome 8, clone RP11-92K15, com... 40 6.0
66gb|AC117207.5| Mus musculus BAC clone RP23-278A7 from 8, complet... 40 6.0
67emb|BX927243.9| Zebrafish DNA sequence from clone DKEY-21E2 in l... 40 6.0
68emb|BX284682.7| Zebrafish DNA sequence from clone DKEYP-74C5 in ... 40 6.0
69emb|AL358813.13| Human DNA sequence from clone RP11-353N4 on chr... 40 6.0
70emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E ... 40 6.0
71dbj|D28854.1|HPCTH33P35 Hepatitis C virus RNA for NS5, partial s... 40 6.0
72gb|AY961628.3| Human herpesvirus 4 strain GD1, complete genome 40 6.0
73emb|CT572983.7| Mouse DNA sequence from clone RP23-110N1 on chro... 40 6.0
74gb|U18914.1|HSU18914 Human 19.8 kDa protein mRNA, complete cds 40 6.0
75emb|BX284650.8| Human DNA sequence from clone RP6-206I17 on chro... 40 6.0
76emb|AL163528.8|HS109K15 Homo sapiens chromosome 9 BAC RP11-109K1... 40 6.0
77gb|BC018117.1| Homo sapiens tumor protein D52, mRNA (cDNA clone ... 40 6.0
78emb|AL442637.4|HS495L19 Homo sapiens chromosome 9 BAC RP11-495L1... 40 6.0
79gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete ge... 40 6.0 
>gb|DQ279927.1| Human herpesvirus 4 strain AG876, complete genome
          Length = 172764

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 166   agacagtagtagcagagcagggc 188
             |||||||||||||||||||||||
Sbjct: 45977 agacagtagtagcagagcagggc 45999
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>emb|V01555.2|EBV Epstein-Barr virus (EBV) genome, strain B95-8
          Length = 172281

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 166   agacagtagtagcagagcagggc 188
             |||||||||||||||||||||||
Sbjct: 58149 agacagtagtagcagagcagggc 58171
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>emb|AJ507799.2|HHV507799 Human herpesvirus 4 complete wild type genome
          Length = 171823

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 166   agacagtagtagcagagcagggc 188
             |||||||||||||||||||||||
Sbjct: 45861 agacagtagtagcagagcagggc 45883
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>gb|M80517.1|HS4B958RAJ Epstein-Barr virus, artifactual joining of B95-8 complete genome and
             the sequences from Raji of the large deletion found in
             B95-8
          Length = 184113

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 166   agacagtagtagcagagcagggc 188
             |||||||||||||||||||||||
Sbjct: 58149 agacagtagtagcagagcagggc 58171
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>gb|M11923.1|HS4BAM Epstein-Barr virus B95-8, BamHI F region
          Length = 7400

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 166  agacagtagtagcagagcagggc 188
            |||||||||||||||||||||||
Sbjct: 3296 agacagtagtagcagagcagggc 3318
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>gb|AC150430.3| Branchiostoma floridae clone CH302-99K22, complete sequence
          Length = 131908

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 303  cagttgtgtttccgtccgtcca 324
            ||||||||||||||||||||||
Sbjct: 3952 cagttgtgtttccgtccgtcca 3931
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>gb|AF165118.1|AF165118 Mus musculus anti-DNP IgM heavy chain variable region mRNA, partial
           cds
          Length = 267

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 14  cctctcccagcactccatatttacagataa 43
           ||||| |||||||| |||||||||||||||
Sbjct: 194 cctctgccagcactgcatatttacagataa 223
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>gb|AF240177.1|AF240177 Mus musculus MRP14 mRNA
          Length = 367

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 14  cctctcccagcactccatatttacagataa 43
           ||||| |||||||| |||||||||||||||
Sbjct: 125 cctctgccagcactgcatatttacagataa 96
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>gb|AF240168.1|AF240168 Mus musculus MRP5 mRNA, partial cds
          Length = 671

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 14  cctctcccagcactccatatttacagataa 43
           ||||| |||||||| |||||||||||||||
Sbjct: 244 cctctgccagcactgcatatttacagataa 273
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>gb|L14364.1|MUSIGHVMA Mus musculus germline Ig H-chain gene, V region (clone VGK2)
          Length = 280

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 14  cctctcccagcactccatatttacagataa 43
           ||||| |||||||| |||||||||||||||
Sbjct: 213 cctctgccagcactgcatatttacagataa 242
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>emb|AM084333.1| Mus musculus chromosome 12 Igh-C and proximal IgH-V region
          Length = 124263

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 14    cctctcccagcactccatatttacagataa 43
             ||||| |||||||| |||||||||||||||
Sbjct: 15874 cctctgccagcactgcatatttacagataa 15903
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>gb|AF045023.1|AF045023 Mus musculus anti-human ovarian carcinoma antibody heavy chain
           variable region (VH) mRNA, partial cds
          Length = 354

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 14  cctctcccagcactccatatttacagataa 43
           ||||| |||||||| |||||||||||||||
Sbjct: 221 cctctgccagcactgcatatttacagataa 250
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>emb|AJ972403.2| Mus musculus chromosome 12 BAC clone 4k8
          Length = 149371

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 14     cctctcccagcactccatatttacagataa 43
              ||||| |||||||| |||||||||||||||
Sbjct: 105950 cctctgccagcactgcatatttacagataa 105921
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>emb|AJ972404.2| Mus musculus chromosome 12 BAC clone 4k8
          Length = 152217

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 14    cctctcccagcactccatatttacagataa 43
             ||||| |||||||| |||||||||||||||
Sbjct: 12244 cctctgccagcactgcatatttacagataa 12215
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>gb|M19900.1|MUSIGHAAD Mouse Ig rearranged gamma-chain mRNA, clone AN08g
          Length = 492

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 14  cctctcccagcactccatatttacagataa 43
           ||||| |||||||| |||||||||||||||
Sbjct: 340 cctctgccagcactgcatatttacagataa 369
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>gb|AC011850.12| Homo sapiens chromosome 15, clone RP11-364J18, complete sequence
          Length = 164681

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 317   tccgtccacctgcctgctttctccc 341
             |||||||||| ||||||||||||||
Sbjct: 36175 tccgtccacccgcctgctttctccc 36199
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>gb|AC168149.7| Medicago truncatula clone mth2-84g4, complete sequence
          Length = 122726

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 247    cctagatgatgaagatgatt 266
              ||||||||||||||||||||
Sbjct: 105523 cctagatgatgaagatgatt 105504
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>gb|AF146601.3| Aeromonas hydrophila clone F121-126 putative rfbN protein, putative
           acyl-CoA reductase LuxC, putative glycosyltransferase,
           putative UDP-galactopyranose mutase, putative
           UDP-galactopyranose mutase, putative glycosly
           transferase, putative SAM-dependent methyltransferase,
           putative glycosyl transferase group 2, putative
           GDP-mannose 4,6-dehydratase, pPutative nucleotide
           di-P-sugar epimerase/dehydratase, putative
           chloramphenicol acetyltransferase, putative N-acetyl
           neuramic acid synthetase NeuB, putative acylneuraminate
           cytidylyltransferase, putative O-antigen methyl
           transferase, putative phosphomannomutase, putative
           polysaccharide biosynthesis protein, putative
           polysaccharide biosynthesis protein, and putative
           glycosidase genes, complete cds
          Length = 20147

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 6   gcagtcatcctctcccagca 25
           ||||||||||||||||||||
Sbjct: 455 gcagtcatcctctcccagca 436
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>gb|AY607038.1| Blastoceros dichotomus cytochrome b gene, complete cds;
           mitochondrial
          Length = 1140

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 122 taattacctagaaacatgaa 141
           ||||||||||||||||||||
Sbjct: 321 taattacctagaaacatgaa 340
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>gb|AC154861.2| Mus musculus BAC clone RP23-8E13 from chromosome 14, complete sequence
          Length = 209896

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 75    acaaaacctgaccaacaagtggca 98
             |||||| |||||||||||||||||
Sbjct: 58036 acaaaaactgaccaacaagtggca 58059
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>gb|AC120364.7| Mus musculus chromosome 8, clone RP24-291F20, complete sequence
          Length = 193257

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    tgcctgctttctccctgaaa 346
              ||||||||||||||||||||
Sbjct: 158188 tgcctgctttctccctgaaa 158207
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>gb|AC111059.9| Mus musculus chromosome 15, clone RP24-495D8, complete sequence
          Length = 124519

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    ataaagaaagcacaaactaa 59
             ||||||||||||||||||||
Sbjct: 37301 ataaagaaagcacaaactaa 37282
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>gb|AC166244.4| Mus musculus chromosome 15, clone RP24-403A9, complete sequence
          Length = 133354

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    ataaagaaagcacaaactaa 59
             ||||||||||||||||||||
Sbjct: 77154 ataaagaaagcacaaactaa 77135



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    ataaagaaagcacaaactaa 59
             ||||||||||||||||||||
Sbjct: 61630 ataaagaaagcacaaactaa 61611
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>gb|AC140209.2| Mus musculus BAC clone RP24-472D23 from chromosome 15, complete sequence
          Length = 175802

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 40     ataaagaaagcacaaactaa 59
              ||||||||||||||||||||
Sbjct: 167865 ataaagaaagcacaaactaa 167884
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>gb|AC158385.4| Mus musculus chromosome 8, clone RP24-247P24, complete sequence
          Length = 148656

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 327    tgcctgctttctccctgaaa 346
              ||||||||||||||||||||
Sbjct: 113666 tgcctgctttctccctgaaa 113647
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>gb|AC165106.5| Mus musculus chromosome 15, clone CH25-352G9, complete sequence
          Length = 90400

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    ataaagaaagcacaaactaa 59
             ||||||||||||||||||||
Sbjct: 88749 ataaagaaagcacaaactaa 88768
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>gb|AC153594.15| Mus musculus 10 BAC RP23-98N14 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 208555

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 13     tcctctcccagcactccatattta 36
              |||||||||| |||||||||||||
Sbjct: 169703 tcctctcccaccactccatattta 169680
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>gb|AF202897.1| Homo sapiens prostate and colon associated protein (PC-1) mRNA,
            complete cds
          Length = 2552

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 186  ggccataatcatatacagta 205
            ||||||||||||||||||||
Sbjct: 2235 ggccataatcatatacagta 2216
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>gb|AC132324.3| Mus musculus BAC clone RP24-270C24 from chromosome 13, complete sequence
          Length = 169258

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 40     ataaagaaagcacaaactaa 59
              ||||||||||||||||||||
Sbjct: 101785 ataaagaaagcacaaactaa 101804
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>gb|AC122475.2| Mus musculus BAC clone RP24-334J11 from chromosome 7, complete sequence
          Length = 172613

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    ataaagaaagcacaaactaa 59
             ||||||||||||||||||||
Sbjct: 68172 ataaagaaagcacaaactaa 68191
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>emb|CR701121.2|CNS0G3XP Tetraodon nigroviridis full-length cDNA
          Length = 1920

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 313 tccgtccgtccacctgcctg 332
           ||||||||||||||||||||
Sbjct: 132 tccgtccgtccacctgcctg 151
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>emb|CR689157.1|CNS0FUPD Tetraodon nigroviridis full-length cDNA
          Length = 1398

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 313 tccgtccgtccacctgcctg 332
           ||||||||||||||||||||
Sbjct: 131 tccgtccgtccacctgcctg 150
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>emb|CR662459.2|CNS0FA4H Tetraodon nigroviridis full-length cDNA
          Length = 1349

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 313 tccgtccgtccacctgcctg 332
           ||||||||||||||||||||
Sbjct: 125 tccgtccgtccacctgcctg 144
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>gb|AC092690.2| Caenorhabditis elegans cosmid BE0003N10, complete sequence
          Length = 28863

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   agtgtggtggtaatttttag 239
             ||||||||||||||||||||
Sbjct: 20250 agtgtggtggtaatttttag 20269
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>gb|BC071648.1| Homo sapiens cDNA clone IMAGE:5243465, **** WARNING: chimeric clone
            ****
          Length = 1834

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 259  agatgattttaagcagtaagaagaagaa 286
            ||||||||| |||| |||||||||||||
Sbjct: 1288 agatgatttaaagctgtaagaagaagaa 1315
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>ref|NM_001025253.1| Homo sapiens tumor protein D52 (TPD52), transcript variant 2, mRNA
          Length = 4035

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 186  ggccataatcatatacagta 205
            ||||||||||||||||||||
Sbjct: 2020 ggccataatcatatacagta 2001
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>ref|NM_005079.2| Homo sapiens tumor protein D52 (TPD52), transcript variant 3, mRNA
          Length = 3966

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 186  ggccataatcatatacagta 205
            ||||||||||||||||||||
Sbjct: 1951 ggccataatcatatacagta 1932
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>ref|NM_001025252.1| Homo sapiens tumor protein D52 (TPD52), transcript variant 1, mRNA
          Length = 4250

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 186  ggccataatcatatacagta 205
            ||||||||||||||||||||
Sbjct: 2235 ggccataatcatatacagta 2216
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>emb|BX248398.9| Human DNA sequence from clone RP6-137J22 on chromosome 1 Contains a
             novel gene, the gene for a novel protein similar to
             cyclophilin-LC (cyclophilin homolog overexpressed in liver
             cancer (chromosome 1 amplified sequence 2)) and a CpG
             island, complete sequence
          Length = 127263

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 259   agatgattttaagcagtaagaagaagaa 286
             ||||||||| |||| |||||||||||||
Sbjct: 51692 agatgatttaaagctgtaagaagaagaa 51719
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>emb|AL365367.10| Human DNA sequence from clone RP4-736C13 on chromosome 1p32.2-32.3
             Contains part of a variant of the DAB1 gene for disabled
             homolog 1 (Drosophila), complete sequence
          Length = 90675

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    atatttacagataaagaaag 49
             ||||||||||||||||||||
Sbjct: 16528 atatttacagataaagaaag 16509
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>emb|AL691471.3| Human DNA sequence from clone RP11-91G11 on chromosome 1 Contains the
             3' end of a novel pseudogene, complete sequence
          Length = 23431

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 259   agatgattttaagcagtaagaagaagaa 286
             ||||||||| |||| |||||||||||||
Sbjct: 10362 agatgatttaaagctgtaagaagaagaa 10389
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>emb|AL592284.10| Human DNA sequence from clone RP11-640M9 on chromosome 1 Contains a
             novel gene, the 5' end of a novel gene a profilin 1 (PFN1)
             pseudogene and a CpG island, complete sequence
          Length = 170669

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 259   agatgattttaagcagtaagaagaagaa 286
             ||||||||| |||| |||||||||||||
Sbjct: 54680 agatgatttaaagctgtaagaagaagaa 54707
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>gb|AE008708.1| Salmonella typhimurium LT2, section 16 of 220 of the complete genome
          Length = 23536

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   cacctgcctgctttctccct 342
             ||||||||||||||||||||
Sbjct: 13929 cacctgcctgctttctccct 13910
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>emb|AJ320483.1|SEN320483 Salmonella enterica subsp. enterica serovar Typhimurium DNA for
             centisome 7 genomic island
          Length = 37866

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   cacctgcctgctttctccct 342
             ||||||||||||||||||||
Sbjct: 32336 cacctgcctgctttctccct 32317
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>emb|AL672225.15| Mouse DNA sequence from clone RP23-384G1 on chromosome 11 Contains the
             5' end of the Spnb2 gene for spectrin beta 2 and a CpG
             island, complete sequence
          Length = 172823

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    ttacagataaagaaagcaca 53
             ||||||||||||||||||||
Sbjct: 86097 ttacagataaagaaagcaca 86116
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>emb|AL773510.5| Mouse DNA sequence from clone RP24-200F10 on chromosome 4 Contains a
              novel gene and a casein kinase II alpha 1 polypeptide
              (Csnk2a1) pseudogene, complete sequence
          Length = 134053

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 270    agcagtaagaagaagaaaag 289
              ||||||||||||||||||||
Sbjct: 111045 agcagtaagaagaagaaaag 111026
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>emb|BX640835.1|HSM806947 Homo sapiens mRNA; cDNA DKFZp686E24213 (from clone DKFZp686E24213)
          Length = 2383

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 186  ggccataatcatatacagta 205
            ||||||||||||||||||||
Sbjct: 2075 ggccataatcatatacagta 2056
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>gb|AC149127.6| Medicago truncatula clone mth2-108o17, complete sequence
          Length = 92727

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 247   cctagatgatgaagatgatt 266
             ||||||||||||||||||||
Sbjct: 52928 cctagatgatgaagatgatt 52947
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>dbj|AK057075.1| Homo sapiens cDNA FLJ32513 fis, clone SMINT1000078, weakly similar to
            C.coturnix japonica mRNA for R10 protein
          Length = 2366

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 186  ggccataatcatatacagta 205
            ||||||||||||||||||||
Sbjct: 2079 ggccataatcatatacagta 2060
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>emb|CR591025.1| full-length cDNA clone CS0DG001YK02 of B cells (Ramos cell line) of
            Homo sapiens (human)
          Length = 2029

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 186  ggccataatcatatacagta 205
            ||||||||||||||||||||
Sbjct: 1773 ggccataatcatatacagta 1754
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>dbj|AK000992.1| Homo sapiens cDNA FLJ10130 fis, clone HEMBA1003035
          Length = 1592

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 259  agatgattttaagcagtaagaagaagaa 286
            ||||||||| |||| |||||||||||||
Sbjct: 1471 agatgatttaaagctgtaagaagaagaa 1498
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>gb|AC096745.2| Homo sapiens BAC clone RP11-358D17 from 4, complete sequence
          Length = 158952

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     aaagaaagcacaaactaaca 61
              ||||||||||||||||||||
Sbjct: 113265 aaagaaagcacaaactaaca 113284
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>ref|XM_680046.1| PREDICTED: Danio rerio similar to RNA polymerase (LOC557066), mRNA
          Length = 2019

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 340 cctgaaaagctactggtgga 359
           ||||||||||||||||||||
Sbjct: 631 cctgaaaagctactggtgga 650
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>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome
          Length = 2628784

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 8       agtcatcctctcccagcact 27
               ||||||||||||||||||||
Sbjct: 2598771 agtcatcctctcccagcact 2598790
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>gb|S82081.1| N8=tumor expression-enhanced gene [human, NCI H-69 cell line, mRNA,
            2185 nt]
          Length = 2185

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 186  ggccataatcatatacagta 205
            ||||||||||||||||||||
Sbjct: 1886 ggccataatcatatacagta 1867
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>dbj|AK053385.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
            library, clone:E130013D14 product:CANDIDATE TUMOR
            SUPPRESSOR PROTEIN DICE1 homolog [Homo sapiens], full
            insert sequence
          Length = 2404

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 75   acaaaacctgaccaacaagtggca 98
            |||||| |||||||||||||||||
Sbjct: 1900 acaaaaactgaccaacaagtggca 1877
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>gb|AC108858.16| Mus musculus chromosome 15, clone RP24-390C21, complete sequence
          Length = 194163

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    ataaagaaagcacaaactaa 59
             ||||||||||||||||||||
Sbjct: 98297 ataaagaaagcacaaactaa 98316



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    ataaagaaagcacaaactaa 59
             ||||||||||||||||||||
Sbjct: 82774 ataaagaaagcacaaactaa 82793
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>gb|AF326256.1|AF326256 Eospalax baileyi isolate 2 cytochrome b (cyt b) gene, complete cds;
           and tRNA-Thr gene, partial sequence; mitochondrial genes
           for mitochondrial products
          Length = 1172

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 122 taattacctagaaacatgaa 141
           ||||||||||||||||||||
Sbjct: 321 taattacctagaaacatgaa 340
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>gb|AF326255.1|AF326255 Eospalax baileyi isolate 1 cytochrome b (cyt b) gene, complete cds;
           and tRNA-Thr gene, partial sequence; mitochondrial genes
           for mitochondrial products
          Length = 1172

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 122 taattacctagaaacatgaa 141
           ||||||||||||||||||||
Sbjct: 321 taattacctagaaacatgaa 340
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>gb|AC157095.9| Mus musculus 6 BAC RP24-350P11 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 177800

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 13     tcctctcccagcactccatattta 36
              |||||||||| |||||||||||||
Sbjct: 172310 tcctctcccaccactccatattta 172333
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>gb|AC011743.9| Homo sapiens BAC clone RP11-299O14 from 2, complete sequence
          Length = 114495

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 219  tagtgtggtggtaattttta 238
            ||||||||||||||||||||
Sbjct: 1311 tagtgtggtggtaattttta 1330
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>gb|AC011238.8| Homo sapiens BAC clone RP11-374C5 from 2, complete sequence
          Length = 155764

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 219    tagtgtggtggtaattttta 238
              ||||||||||||||||||||
Sbjct: 155075 tagtgtggtggtaattttta 155094
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>gb|AC129664.7| Homo sapiens BAC clone RP11-237A9 from 4, complete sequence
          Length = 183495

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 318    ccgtccacctgcctgctttctccc 341
              |||||||||||||| |||||||||
Sbjct: 106500 ccgtccacctgcctcctttctccc 106523
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>gb|AC127385.6| Homo sapiens BAC clone RP13-489M19 from 4, complete sequence
          Length = 262955

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 318   ccgtccacctgcctgctttctccc 341
             |||||||||||||| |||||||||
Sbjct: 15484 ccgtccacctgcctcctttctccc 15461
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>gb|AC009686.14| Homo sapiens chromosome 8, clone RP11-92K15, complete sequence
          Length = 191166

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   ggccataatcatatacagta 205
             ||||||||||||||||||||
Sbjct: 33158 ggccataatcatatacagta 33177
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>gb|AC117207.5| Mus musculus BAC clone RP23-278A7 from 8, complete sequence
          Length = 198927

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 415    tttctcactccattcactct 434
              ||||||||||||||||||||
Sbjct: 116029 tttctcactccattcactct 116010
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>emb|BX927243.9| Zebrafish DNA sequence from clone DKEY-21E2 in linkage group 22,
            complete sequence
          Length = 227003

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 340  cctgaaaagctactggtgga 359
            ||||||||||||||||||||
Sbjct: 1469 cctgaaaagctactggtgga 1450
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>emb|BX284682.7| Zebrafish DNA sequence from clone DKEYP-74C5 in linkage group 22,
             complete sequence
          Length = 206289

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 340   cctgaaaagctactggtgga 359
             ||||||||||||||||||||
Sbjct: 93032 cctgaaaagctactggtgga 93051
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>emb|AL358813.13| Human DNA sequence from clone RP11-353N4 on chromosome 1 Contains the
            3' end of a novel gene, a novel gene, a novel pseudogene,
            a NHP2 non-histone chromosome protein 2-like 1 (S.
            cerevisiae) (NHP2L1) pseudogene, two novel genes and two
            CpG islands, complete sequence
          Length = 125166

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 259  agatgattttaagcagtaagaagaagaa 286
            ||||||||| |||| |||||||||||||
Sbjct: 4416 agatgatttaaagctgtaagaagaagaa 4389
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>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5)
          Length = 2199546

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 251     gatgatgaagatgattttaa 270
               ||||||||||||||||||||
Sbjct: 1730973 gatgatgaagatgattttaa 1730992
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>dbj|D28854.1|HPCTH33P35 Hepatitis C virus RNA for NS5, partial sequence
          Length = 366

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 408 tggccgctttctcactccat 427
           ||||||||||||||||||||
Sbjct: 200 tggccgctttctcactccat 219
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>gb|AY961628.3| Human herpesvirus 4 strain GD1, complete genome
          Length = 171657

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   cagtagtagcagagcagggc 188
             ||||||||||||||||||||
Sbjct: 45800 cagtagtagcagagcagggc 45819
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>emb|CT572983.7| Mouse DNA sequence from clone RP23-110N1 on chromosome 14, complete
             sequence
          Length = 218673

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 75    acaaaacctgaccaacaagtggca 98
             |||||| |||||||||||||||||
Sbjct: 51310 acaaaaactgaccaacaagtggca 51287
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>gb|U18914.1|HSU18914 Human 19.8 kDa protein mRNA, complete cds
          Length = 3247

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 186  ggccataatcatatacagta 205
            ||||||||||||||||||||
Sbjct: 1884 ggccataatcatatacagta 1865
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>emb|BX284650.8| Human DNA sequence from clone RP6-206I17 on chromosome 1, complete
             sequence
          Length = 126477

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 259   agatgattttaagcagtaagaagaagaa 286
             ||||||||| |||| |||||||||||||
Sbjct: 85324 agatgatttaaagctgtaagaagaagaa 85351
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>emb|AL163528.8|HS109K15 Homo sapiens chromosome 9 BAC RP11-109K15, complete sequence
          Length = 184517

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 38     agataaagaaagcacaaact 57
              ||||||||||||||||||||
Sbjct: 136202 agataaagaaagcacaaact 136183
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>gb|BC018117.1| Homo sapiens tumor protein D52, mRNA (cDNA clone MGC:8975
            IMAGE:3916870), complete cds
          Length = 2201

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 186  ggccataatcatatacagta 205
            ||||||||||||||||||||
Sbjct: 1880 ggccataatcatatacagta 1861
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>emb|AL442637.4|HS495L19 Homo sapiens chromosome 9 BAC RP11-495L19, complete sequence
          Length = 180915

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 38     agataaagaaagcacaaact 57
              ||||||||||||||||||||
Sbjct: 144044 agataaagaaagcacaaact 144063
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>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome
          Length = 2056416

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 293     ggcgctttttcagttgtgtttccg 316
               ||||||||||||||| ||||||||
Sbjct: 1921492 ggcgctttttcagttttgtttccg 1921469


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,184,872
Number of Sequences: 3902068
Number of extensions: 6184872
Number of successful extensions: 123849
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 123696
Number of HSP's gapped (non-prelim): 153
length of query: 447
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 425
effective length of database: 17,147,199,772
effective search space: 7287559903100
effective search space used: 7287559903100
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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