ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart09g10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK120714.1| Oryza sativa (japonica cultivar-group) cDNA clon... 256 6e-65
2emb|BX824956.1|CNS0A7UE Arabidopsis thaliana Full-length cDNA Co... 92 2e-15
3ref|NM_180683.1| Arabidopsis thaliana unknown protein AT3G48860 ... 90 9e-15
4ref|NM_114745.3| Arabidopsis thaliana unknown protein AT3G48860 ... 90 9e-15
5gb|AY093166.1| Arabidopsis thaliana putative protein (At3g48860)... 90 9e-15
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
7dbj|AP004330.3| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
8ref|NM_121329.3| Arabidopsis thaliana unknown protein AT5G13260 ... 66 1e-07
9gb|AY113850.1| Arabidopsis thaliana unknown protein (At5g13260) ... 66 1e-07
10gb|AY064036.1| Arabidopsis thaliana unknown protein (At5g13260) ... 66 1e-07
11emb|BX829923.1|CNS0A04A Arabidopsis thaliana Full-length cDNA Co... 66 1e-07
12ref|NM_189998.1| Oryza sativa (japonica cultivar-group), predic... 64 5e-07
13emb|AL132963.1|ATT21J18 Arabidopsis thaliana DNA chromosome 3, B... 62 2e-06
14emb|AL163491.1|ATT31B5 Arabidopsis thaliana DNA chromosome 5, BA... 48 0.029
15ref|NM_122275.2| Arabidopsis thaliana unknown protein AT5G23700 ... 46 0.12
16ref|NM_116932.2| Arabidopsis thaliana unknown protein AT4G08630 ... 46 0.12
17dbj|AB025633.2| Arabidopsis thaliana genomic DNA, chromosome 5, ... 46 0.12
18emb|CR378663.1| Photobacterium profundum SS9; segment 1/12 44 0.46
19ref|NM_118639.2| Arabidopsis thaliana unknown protein AT4G25070 ... 42 1.8
20gb|AY735650.1| Arabidopsis thaliana hypothetical protein AT4G250... 42 1.8
21gb|AC115290.5| Mus musculus BAC clone RP23-65M10 from chromosome... 42 1.8
22gb|AC005249.2| Homo sapiens BAC clone GS1-115J1 from 7, complete... 42 1.8
23gb|AC145519.1| Pan troglodytes BAC clone RP43-32M13 from 7, comp... 42 1.8
24gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 7.2
25gb|BT014080.1| Lycopersicon esculentum clone 133180F, mRNA sequence 40 7.2
26gb|AF067222.1| Caenorhabditis elegans fosmid H11E01, complete se... 40 7.2
27gb|AF067209.2| Caenorhabditis elegans cosmid B0344, complete seq... 40 7.2
28gb|AC148178.35| Medicago truncatula clone mth2-5b21, complete se... 40 7.2
29gb|AC163034.4| Mus musculus BAC clone RP23-394C13 from chromosom... 40 7.2
30emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, ... 40 7.2
31emb|AL035523.1|ATF13M23 Arabidopsis thaliana DNA chromosome 4, B... 40 7.2
32emb|AL035396.1|ATF24A6 Arabidopsis thaliana DNA chromosome 4, BA... 40 7.2
33ref|NM_075898.3| Caenorhabditis elegans H11E01.3 (H11E01.3) mRNA... 40 7.2
34emb|AL808136.9| Mouse DNA sequence from clone RP23-75D13 on chro... 40 7.2 
>dbj|AK120714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002A11, full
           insert sequence
          Length = 2214

 Score =  256 bits (129), Expect = 6e-65
 Identities = 294/349 (84%)
 Strand = Plus / Minus

                                                                       
Query: 154 gcttccttcctgctcaagaggcgagcttctaaggataccccgtctccgagagcagctacc 213
           ||||| |||||||||||||||||||||||||| |||||||| || || || |||||||||
Sbjct: 913 gcttctttcctgctcaagaggcgagcttctaatgataccccttccccaagggcagctacc 854

                                                                       
Query: 214 tgtttctcaagctccttcgccctagcttccgcttcctcgcatttttcttcagcacgccgt 273
           ||||||||||||||||| || |||||||| ||||| || ||| ||||||||||| | |||
Sbjct: 853 tgtttctcaagctccttggctctagcttctgcttcttcacatctttcttcagcaagtcgt 794

                                                                       
Query: 274 aacttgtctagaacactttcattctcctcttgtagcatatcaagctcatcttgaagtgta 333
           | ||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 793 agcttttctagaacactctcattctcctcttgtagtatatcaagctcatcttgaagtgca 734

                                                                       
Query: 334 gatgactctctccgtggcgctgactctctagagttaagtggggctgtatcaaaccttttc 393
           || | ||| ||   ||| | ||| ||||| ||||| ||  |  |||||||||||||||||
Sbjct: 733 gacgcctccctttttggtgttgattctctggagttgagatgccctgtatcaaaccttttc 674

                                                                       
Query: 394 tgtcgagggcgctccactggggactccacagccacaggtgggataggagacggggttctg 453
           || |||  ||| |||||||| | |||||||||||||||||| ||||| || || || |  
Sbjct: 673 tgccgactgcggtccactggaggctccacagccacaggtggaataggcgatggtgtccgc 614

                                                            
Query: 454 atggtagtgttggttttgattggtggaaccactgtggcggtcggtcgtg 502
           |  || ||| |||||||||| ||||||||||| |||| |||||| ||||
Sbjct: 613 aatgtcgtgctggttttgatcggtggaaccaccgtggtggtcggccgtg 565
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>emb|BX824956.1|CNS0A7UE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH85ZD12 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1918

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 97/114 (85%)
 Strand = Plus / Minus

                                                                       
Query: 210 tacctgtttctcaagctccttcgccctagcttccgcttcctcgcatttttcttcagcacg 269
           |||||||||||| |||||||| ||||||||||| |||||| | | ||||||||| |||||
Sbjct: 910 tacctgtttctcgagctccttagccctagcttctgcttccacccttttttcttccgcacg 851

                                                                 
Query: 270 ccgtaacttgtctagaacactttcattctcctcttgtagcatatcaagctcatc 323
            || | ||| || || ||| | ||||||||||||||||||||||| || |||||
Sbjct: 850 acgaagcttctccagtacattctcattctcctcttgtagcatatccagttcatc 797
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>ref|NM_180683.1| Arabidopsis thaliana unknown protein AT3G48860 transcript variant
           AT3G48860.1 mRNA, complete cds
          Length = 1842

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 96/113 (84%)
 Strand = Plus / Minus

                                                                       
Query: 211 acctgtttctcaagctccttcgccctagcttccgcttcctcgcatttttcttcagcacgc 270
           ||||||||||| |||||||| ||||||||||| |||||| | | ||||||||| ||||| 
Sbjct: 900 acctgtttctcgagctccttagccctagcttctgcttccacccttttttcttccgcacga 841

                                                                
Query: 271 cgtaacttgtctagaacactttcattctcctcttgtagcatatcaagctcatc 323
           || | ||| || || ||| | ||||||||||||||||||||||| || |||||
Sbjct: 840 cgaagcttctccagtacattctcattctcctcttgtagcatatccagttcatc 788
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>ref|NM_114745.3| Arabidopsis thaliana unknown protein AT3G48860 transcript variant
           AT3G48860.2 mRNA, complete cds
          Length = 2044

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 96/113 (84%)
 Strand = Plus / Minus

                                                                       
Query: 211 acctgtttctcaagctccttcgccctagcttccgcttcctcgcatttttcttcagcacgc 270
           ||||||||||| |||||||| ||||||||||| |||||| | | ||||||||| ||||| 
Sbjct: 900 acctgtttctcgagctccttagccctagcttctgcttccacccttttttcttccgcacga 841

                                                                
Query: 271 cgtaacttgtctagaacactttcattctcctcttgtagcatatcaagctcatc 323
           || | ||| || || ||| | ||||||||||||||||||||||| || |||||
Sbjct: 840 cgaagcttctccagtacattctcattctcctcttgtagcatatccagttcatc 788
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>gb|AY093166.1| Arabidopsis thaliana putative protein (At3g48860) mRNA, complete
           cds
          Length = 2043

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 96/113 (84%)
 Strand = Plus / Minus

                                                                       
Query: 211 acctgtttctcaagctccttcgccctagcttccgcttcctcgcatttttcttcagcacgc 270
           ||||||||||| |||||||| ||||||||||| |||||| | | ||||||||| ||||| 
Sbjct: 900 acctgtttctcgagctccttagccctagcttctgcttccacccttttttcttccgcacga 841

                                                                
Query: 271 cgtaacttgtctagaacactttcattctcctcttgtagcatatcaagctcatc 323
           || | ||| || || ||| | ||||||||||||||||||||||| || |||||
Sbjct: 840 cgaagcttctccagtacattctcattctcctcttgtagcatatccagttcatc 788
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                      
Query: 162      cctgctcaagaggcgagcttctaaggataccccgtctccgagagcagctacctg 215
                |||||||||||||||||||||||| |||||||| || || || |||||||||||
Sbjct: 40719928 cctgctcaagaggcgagcttctaatgataccccttccccaagggcagctacctg 40719981



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 96/117 (82%)
 Strand = Plus / Plus

                                                                            
Query: 386      accttttctgtcgagggcgctccactggggactccacagccacaggtgggataggagacg 445
                |||||||||| |||  ||| |||||||| | |||||||||||||||||| ||||| || |
Sbjct: 40721855 accttttctgccgactgcggtccactggaggctccacagccacaggtggaataggcgatg 40721914

                                                                         
Query: 446      gggttctgatggtagtgttggttttgattggtggaaccactgtggcggtcggtcgtg 502
                | || |  |  || ||| |||||||||| ||||||||||| |||| |||||| ||||
Sbjct: 40721915 gtgtccgcaatgtcgtgctggttttgatcggtggaaccaccgtggtggtcggccgtg 40721971



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                         
Query: 211      acctgtttctcaagctccttcgccctagcttccgcttcctcgcatttttcttcagca 267
                |||||||||||||||||||| || |||||||| ||||| || ||| |||||||||||
Sbjct: 40720226 acctgtttctcaagctccttggctctagcttctgcttcttcacatctttcttcagca 40720282



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                        
Query: 280      tctagaacactttcattctcctcttgtagcatatcaagct 319
                ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 40720389 tctagaacactctcattctcctcttgtagtatatcaagct 40720428
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>dbj|AP004330.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0052O12
          Length = 167881

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                   
Query: 162   cctgctcaagaggcgagcttctaaggataccccgtctccgagagcagctacctg 215
             |||||||||||||||||||||||| |||||||| || || || |||||||||||
Sbjct: 22574 cctgctcaagaggcgagcttctaatgataccccttccccaagggcagctacctg 22627



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 96/117 (82%)
 Strand = Plus / Plus

                                                                         
Query: 386   accttttctgtcgagggcgctccactggggactccacagccacaggtgggataggagacg 445
             |||||||||| |||  ||| |||||||| | |||||||||||||||||| ||||| || |
Sbjct: 24501 accttttctgccgactgcggtccactggaggctccacagccacaggtggaataggcgatg 24560

                                                                      
Query: 446   gggttctgatggtagtgttggttttgattggtggaaccactgtggcggtcggtcgtg 502
             | || |  |  || ||| |||||||||| ||||||||||| |||| |||||| ||||
Sbjct: 24561 gtgtccgcaatgtcgtgctggttttgatcggtggaaccaccgtggtggtcggccgtg 24617



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                      
Query: 211   acctgtttctcaagctccttcgccctagcttccgcttcctcgcatttttcttcagca 267
             |||||||||||||||||||| || |||||||| ||||| || ||| |||||||||||
Sbjct: 22872 acctgtttctcaagctccttggctctagcttctgcttcttcacatctttcttcagca 22928



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                     
Query: 280   tctagaacactttcattctcctcttgtagcatatcaagct 319
             ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 23035 tctagaacactctcattctcctcttgtagtatatcaagct 23074
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>ref|NM_121329.3| Arabidopsis thaliana unknown protein AT5G13260 mRNA, complete cds
          Length = 1950

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 114/141 (80%)
 Strand = Plus / Minus

                                                                       
Query: 177 agcttctaaggataccccgtctccgagagcagctacctgtttctcaagctccttcgccct 236
           |||||| || ||||| || ||||| |||| || ||||||||| ||||||||  || ||||
Sbjct: 865 agcttccaatgatacaccttctcccagagaagttacctgtttttcaagctctctcaccct 806

                                                                       
Query: 237 agcttccgcttcctcgcatttttcttcagcacgccgtaacttgtctagaacactttcatt 296
           |||||| ||||||| |||||| || ||  || |||  | ||| || || | ||| |||||
Sbjct: 805 agcttctgcttccttgcatttctcatcctcaagcctaagcttttcaagtatactatcatt 746

                                
Query: 297 ctcctcttgtagcatatcaag 317
           ||||||||| |||||||||||
Sbjct: 745 ctcctcttgcagcatatcaag 725
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>gb|AY113850.1| Arabidopsis thaliana unknown protein (At5g13260) mRNA, complete cds
          Length = 1645

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 114/141 (80%)
 Strand = Plus / Minus

                                                                       
Query: 177 agcttctaaggataccccgtctccgagagcagctacctgtttctcaagctccttcgccct 236
           |||||| || ||||| || ||||| |||| || ||||||||| ||||||||  || ||||
Sbjct: 729 agcttccaatgatacaccttctcccagagaagttacctgtttttcaagctctctcaccct 670

                                                                       
Query: 237 agcttccgcttcctcgcatttttcttcagcacgccgtaacttgtctagaacactttcatt 296
           |||||| ||||||| |||||| || ||  || |||  | ||| || || | ||| |||||
Sbjct: 669 agcttctgcttccttgcatttctcatcctcaagcctaagcttttcaagtatactatcatt 610

                                
Query: 297 ctcctcttgtagcatatcaag 317
           ||||||||| |||||||||||
Sbjct: 609 ctcctcttgcagcatatcaag 589
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>gb|AY064036.1| Arabidopsis thaliana unknown protein (At5g13260) mRNA, complete cds
          Length = 1957

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 114/141 (80%)
 Strand = Plus / Minus

                                                                       
Query: 177 agcttctaaggataccccgtctccgagagcagctacctgtttctcaagctccttcgccct 236
           |||||| || ||||| || ||||| |||| || ||||||||| ||||||||  || ||||
Sbjct: 860 agcttccaatgatacaccttctcccagagaagttacctgtttttcaagctctctcaccct 801

                                                                       
Query: 237 agcttccgcttcctcgcatttttcttcagcacgccgtaacttgtctagaacactttcatt 296
           |||||| ||||||| |||||| || ||  || |||  | ||| || || | ||| |||||
Sbjct: 800 agcttctgcttccttgcatttctcatcctcaagcctaagcttttcaagtatactatcatt 741

                                
Query: 297 ctcctcttgtagcatatcaag 317
           ||||||||| |||||||||||
Sbjct: 740 ctcctcttgcagcatatcaag 720
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>emb|BX829923.1|CNS0A04A Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB46ZC04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1779

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 114/141 (80%)
 Strand = Plus / Minus

                                                                       
Query: 177 agcttctaaggataccccgtctccgagagcagctacctgtttctcaagctccttcgccct 236
           |||||| || ||||| || ||||| |||| || ||||||||| ||||||||  || ||||
Sbjct: 721 agcttccaatgatacaccttctcccagagaagttacctgtttttcaagctctctcaccct 662

                                                                       
Query: 237 agcttccgcttcctcgcatttttcttcagcacgccgtaacttgtctagaacactttcatt 296
           |||||| ||||||| |||||| || ||  || |||  | ||| || || | ||| |||||
Sbjct: 661 agcttctgcttccttgcatttctcatcctcaagcctaagcttttcaagtatactatcatt 602

                                
Query: 297 ctcctcttgtagcatatcaag 317
           ||||||||| |||||||||||
Sbjct: 601 ctcctcttgcagcatatcaag 581
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>ref|NM_189998.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1449

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                   
Query: 212 cctgtttctcaagctccttcgccctagcttccgcttcctcgcatttttcttcagca 267
           ||||||||||||||||||| || |||||||| ||||| || ||| |||||||||||
Sbjct: 651 cctgtttctcaagctccttggctctagcttctgcttcttcacatctttcttcagca 596



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 94/115 (81%)
 Strand = Plus / Minus

                                                                       
Query: 388 cttttctgtcgagggcgctccactggggactccacagccacaggtgggataggagacggg 447
           |||||||| |||  ||| |||||||| | |||||||||||||||||| ||||| || || 
Sbjct: 587 cttttctgccgactgcggtccactggaggctccacagccacaggtggaataggcgatggt 528

                                                                  
Query: 448 gttctgatggtagtgttggttttgattggtggaaccactgtggcggtcggtcgtg 502
           || |  |  || ||| |||||||||| ||||||||||| |||| |||||| ||||
Sbjct: 527 gtccgcaatgtcgtgctggttttgatcggtggaaccaccgtggtggtcggccgtg 473
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>emb|AL132963.1|ATT21J18 Arabidopsis thaliana DNA chromosome 3, BAC clone T21J18
          Length = 82912

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                        
Query: 211   acctgtttctcaagctccttcgccctagcttccgcttcctcgcatttttcttcagcacg 269
             ||||||||||| |||||||| ||||||||||| |||||| | | ||||||||| |||||
Sbjct: 67443 acctgtttctcgagctccttagccctagcttctgcttccacccttttttcttccgcacg 67385



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 292   tcattctcctcttgtagcatatcaagct 319
             ||||||||||||||||||||||| ||||
Sbjct: 67280 tcattctcctcttgtagcatatccagct 67253
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>emb|AL163491.1|ATT31B5 Arabidopsis thaliana DNA chromosome 5, BAC clone T31B5 (ESSA project)
          Length = 82612

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 292   tcattctcctcttgtagcatatcaagct 319
             |||||||||||||| |||||||||||||
Sbjct: 40973 tcattctcctcttgcagcatatcaagct 40946
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>ref|NM_122275.2| Arabidopsis thaliana unknown protein AT5G23700 mRNA, complete cds
          Length = 1719

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 292 tcattctcctcttgtagcatatc 314
           |||||||||||||||||||||||
Sbjct: 608 tcattctcctcttgtagcatatc 586
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>ref|NM_116932.2| Arabidopsis thaliana unknown protein AT4G08630 mRNA, complete cds
          Length = 2538

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 288  actttcattctcctcttgtagcatatcaagctcatcttg 326
            ||||||||| || || ||||||||||||| |||||||||
Sbjct: 1368 actttcattttcttcctgtagcatatcaacctcatcttg 1330
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>dbj|AB025633.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQM1
          Length = 81365

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 292   tcattctcctcttgtagcatatc 314
             |||||||||||||||||||||||
Sbjct: 72790 tcattctcctcttgtagcatatc 72768
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>emb|CR378663.1| Photobacterium profundum SS9; segment 1/12
          Length = 348044

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 301   tcttgtagcatatcaagctcatcttg 326
             ||||||||| ||||||||||||||||
Sbjct: 46438 tcttgtagcttatcaagctcatcttg 46413
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>ref|NM_118639.2| Arabidopsis thaliana unknown protein AT4G25070 mRNA, complete cds
          Length = 2298

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 202  agagcagctacctgtttctcaagctccttcgccctagcttc 242
            |||| ||| ||||||||||||||||| || ||||| |||||
Sbjct: 1343 agagaagcaacctgtttctcaagctctttagcccttgcttc 1303
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>gb|AY735650.1| Arabidopsis thaliana hypothetical protein AT4G25070 mRNA, complete
            cds
          Length = 2631

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 202  agagcagctacctgtttctcaagctccttcgccctagcttc 242
            |||| ||| ||||||||||||||||| || ||||| |||||
Sbjct: 1379 agagaagcaacctgtttctcaagctctttagcccttgcttc 1339
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>gb|AC115290.5| Mus musculus BAC clone RP23-65M10 from chromosome 10, complete sequence
          Length = 245623

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 457    gtagtgttggttttgattggt 477
              |||||||||||||||||||||
Sbjct: 113628 gtagtgttggttttgattggt 113648
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>gb|AC005249.2| Homo sapiens BAC clone GS1-115J1 from 7, complete sequence
          Length = 162531

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 406    tccactggggactccacagcc 426
              |||||||||||||||||||||
Sbjct: 127618 tccactggggactccacagcc 127598
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>gb|AC145519.1| Pan troglodytes BAC clone RP43-32M13 from 7, complete sequence
          Length = 155340

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 406   tccactggggactccacagcc 426
             |||||||||||||||||||||
Sbjct: 67127 tccactggggactccacagcc 67107
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   tttcattctcctcttgtagc 309
             ||||||||||||||||||||
Sbjct: 40752 tttcattctcctcttgtagc 40733
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>gb|BT014080.1| Lycopersicon esculentum clone 133180F, mRNA sequence
          Length = 2093

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 292 tcattctcctcttgtagcatatcaagctcatc 323
           ||||| || ||||| |||||||||||||||||
Sbjct: 797 tcattttcttcttgaagcatatcaagctcatc 766
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>gb|AF067222.1| Caenorhabditis elegans fosmid H11E01, complete sequence
          Length = 19404

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 155  cttccttcctgctcaagagg 174
            ||||||||||||||||||||
Sbjct: 5935 cttccttcctgctcaagagg 5916
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>gb|AF067209.2| Caenorhabditis elegans cosmid B0344, complete sequence
          Length = 41869

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   cttccttcctgctcaagagg 174
             ||||||||||||||||||||
Sbjct: 39504 cttccttcctgctcaagagg 39485
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>gb|AC148178.35| Medicago truncatula clone mth2-5b21, complete sequence
          Length = 115185

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 57     aaagccaattacacatttca 76
              ||||||||||||||||||||
Sbjct: 102068 aaagccaattacacatttca 102087
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>gb|AC163034.4| Mus musculus BAC clone RP23-394C13 from chromosome 12, complete
             sequence
          Length = 187877

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 311   tatcaagctcatcttgaagt 330
             ||||||||||||||||||||
Sbjct: 65115 tatcaagctcatcttgaagt 65134
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>emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 62
          Length = 197070

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 211    acctgtttctcaagctccttcgccctagcttc 242
              ||||||||||||||||| || ||||| |||||
Sbjct: 148386 acctgtttctcaagctctttagcccttgcttc 148355
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>emb|AL035523.1|ATF13M23 Arabidopsis thaliana DNA chromosome 4, BAC clone  F13M23 (ESSAII
             project)
          Length = 99688

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 211   acctgtttctcaagctccttcgccctagcttc 242
             ||||||||||||||||| || ||||| |||||
Sbjct: 66638 acctgtttctcaagctctttagcccttgcttc 66607
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>emb|AL035396.1|ATF24A6 Arabidopsis thaliana DNA chromosome 4, BAC clone  F24A6 (ESSAII
            project)
          Length = 92073

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 211  acctgtttctcaagctccttcgccctagcttc 242
            ||||||||||||||||| || ||||| |||||
Sbjct: 6505 acctgtttctcaagctctttagcccttgcttc 6474
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>ref|NM_075898.3| Caenorhabditis elegans H11E01.3 (H11E01.3) mRNA, complete cds
          Length = 4440

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 155  cttccttcctgctcaagagg 174
            ||||||||||||||||||||
Sbjct: 3008 cttccttcctgctcaagagg 2989
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>emb|AL808136.9| Mouse DNA sequence from clone RP23-75D13 on chromosome X, complete
              sequence
          Length = 183746

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 288    actttcattctcctcttgta 307
              ||||||||||||||||||||
Sbjct: 143339 actttcattctcctcttgta 143320


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,436,818
Number of Sequences: 3902068
Number of extensions: 4436818
Number of successful extensions: 72775
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72683
Number of HSP's gapped (non-prelim): 92
length of query: 531
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 508
effective length of database: 17,143,297,704
effective search space: 8708795233632
effective search space used: 8708795233632
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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