ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart09g07 |
|---|---|
| Clone Library Name | barley_pub |
>IF6_HUMAN (P56537) Eukaryotic translation initiation factor 6 (eIF-6) (B4| integrin interactor) (CAB) (p27(BBP)) (B(2)GCN homolog) Length = 245 Score = 174 bits (441), Expect = 1e-43 Identities = 86/108 (79%), Positives = 93/108 (86%) Frame = -1 Query: 508 EVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAA 329 EVFRQT+A +LVGSYC FSN+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVIAA Sbjct: 136 EVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAA 195 Query: 328 GMTVNDWTAFCGSDTTATELSVIESVFKLREGQPTAIVDDMRKSLIDS 185 GM VNDW AFCG DTT+TELSV+ESVFKL E QP+ I MR SLIDS Sbjct: 196 GMVVNDWCAFCGLDTTSTELSVVESVFKLNEAQPSTIATSMRDSLIDS 243
>IF6_MOUSE (O55135) Eukaryotic translation initiation factor 6 (eIF-6) (B4| integrin interactor) (CAB) (p27(BBP)) Length = 245 Score = 172 bits (437), Expect = 4e-43 Identities = 85/108 (78%), Positives = 93/108 (86%) Frame = -1 Query: 508 EVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAA 329 EVFRQT+A +LVGSYC FSN+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVIAA Sbjct: 136 EVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAA 195 Query: 328 GMTVNDWTAFCGSDTTATELSVIESVFKLREGQPTAIVDDMRKSLIDS 185 GM VNDW AFCG DTT+TELSV+ESVFKL E +P+ I MR SLIDS Sbjct: 196 GMVVNDWCAFCGLDTTSTELSVVESVFKLNEAKPSTIATSMRDSLIDS 243
>IF6_ARATH (O22290) Eukaryotic translation initiation factor 6 (eIF-6)| Length = 247 Score = 160 bits (406), Expect = 1e-39 Identities = 75/110 (68%), Positives = 95/110 (86%) Frame = -1 Query: 508 EVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAA 329 EV+RQTIA N LVGSYC+ SN GG+VH +T++E++ EL+ L+QVPLVAGTVNRGS+VI+A Sbjct: 138 EVYRQTIANNELVGSYCSLSNNGGMVHSNTNVEEMVELANLVQVPLVAGTVNRGSQVISA 197 Query: 328 GMTVNDWTAFCGSDTTATELSVIESVFKLREGQPTAIVDDMRKSLIDSYV 179 G+TVNDWTAFCGSDTTA ELSV+ ++FKL + QP + +MRKSLID+YV Sbjct: 198 GLTVNDWTAFCGSDTTAVELSVVNNIFKLVQSQPDFVGSEMRKSLIDTYV 247
>IF6_SCHPO (O94476) Eukaryotic translation initiation factor 6 (eIF-6)| Length = 244 Score = 158 bits (400), Expect = 7e-39 Identities = 75/109 (68%), Positives = 94/109 (86%) Frame = -1 Query: 508 EVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAA 329 EVFRQT+AGN+L GSYCA SN+G LVHP TSI++ DELS+LLQVPLVAGT+NRGS+VI A Sbjct: 136 EVFRQTVAGNVLTGSYCALSNQGALVHPRTSIQEQDELSSLLQVPLVAGTINRGSDVIGA 195 Query: 328 GMTVNDWTAFCGSDTTATELSVIESVFKLREGQPTAIVDDMRKSLIDSY 182 G+ VNDW AF G DTTATEL+V ES+FKL++ QP+AI+ + R +L++SY Sbjct: 196 GLVVNDWCAFAGLDTTATELAVCESIFKLQDAQPSAIISN-RDTLVESY 243
>IF6_YEAST (Q12522) Eukaryotic translation initiation factor 6 (eIF-6)| Length = 245 Score = 154 bits (389), Expect = 1e-37 Identities = 74/109 (67%), Positives = 93/109 (85%) Frame = -1 Query: 508 EVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAA 329 EVFRQTI+GNILVGSYC+ SN+GGLVHP TS++D +ELS+LLQVPLVAGTVNRGS V+ A Sbjct: 136 EVFRQTISGNILVGSYCSLSNQGGLVHPQTSVQDQEELSSLLQVPLVAGTVNRGSSVVGA 195 Query: 328 GMTVNDWTAFCGSDTTATELSVIESVFKLREGQPTAIVDDMRKSLIDSY 182 GM VND+ A G DTTA ELSVIES+F+L++ QP +I ++R +LI++Y Sbjct: 196 GMVVNDYLAVTGLDTTAPELSVIESIFRLQDAQPESISGNLRDTLIETY 244
>IF6_DROME (P56538) Probable eukaryotic translation initiation factor 6| (eIF-6) Length = 245 Score = 153 bits (386), Expect = 3e-37 Identities = 75/107 (70%), Positives = 88/107 (82%) Frame = -1 Query: 508 EVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAA 329 EVFRQTIA N LVGSY SN+GG+VHP TSI+D DELS+LLQVPLVAGTVNRGSEV+AA Sbjct: 136 EVFRQTIADNSLVGSYAVLSNQGGMVHPKTSIQDQDELSSLLQVPLVAGTVNRGSEVLAA 195 Query: 328 GMTVNDWTAFCGSDTTATELSVIESVFKLREGQPTAIVDDMRKSLID 188 GM VNDW +F G +TTATE+SVIESVFKL + QP + +R +LI+ Sbjct: 196 GMVVNDWLSFVGMNTTATEISVIESVFKLNQAQPATVTTKLRAALIE 242
>IF6_CAEEL (O62106) Eukaryotic translation initiation factor 6 (eIF-6)| Length = 246 Score = 127 bits (318), Expect = 2e-29 Identities = 65/109 (59%), Positives = 82/109 (75%), Gaps = 1/109 (0%) Frame = -1 Query: 508 EVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAA 329 EVFR ++A N LVGSYC S+ G LV T E E++ LLQ+P+VAGT NRGSE+I A Sbjct: 136 EVFRVSLAQNSLVGSYCILSSNGCLVAARTPPETQREIAALLQIPVVAGTCNRGSELIGA 195 Query: 328 GMTVNDWTAFCGSDTTATELSVIESVFKLRE-GQPTAIVDDMRKSLIDS 185 GM VNDW AFCG D+T+TELSV+ES+FKL E G PT+I + +R +LI+S Sbjct: 196 GMVVNDWVAFCGLDSTSTELSVVESIFKLGEQGAPTSISNQLRDTLIES 244
>IF6_TRYCR (Q9XYP3) Eukaryotic translation initiation factor 6 (eIF-6)| (Fragment) Length = 114 Score = 120 bits (300), Expect = 3e-27 Identities = 55/108 (50%), Positives = 80/108 (74%), Gaps = 3/108 (2%) Frame = -1 Query: 502 FRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGM 323 FR +IA N LVGSY +N+G +VHP T +D+DE+++LLQVP+VAGT+NRG+ I +G+ Sbjct: 4 FRTSIAENALVGSYAVVNNKGCMVHPKTPAQDMDEIASLLQVPVVAGTINRGNAAIGSGL 63 Query: 322 TVNDWTAFCGSDTTATELSVIESVFKLRE---GQPTAIVDDMRKSLID 188 VNDW AFCG +TTATE++V+E +F+LR G ++ +R +L+D Sbjct: 64 VVNDWAAFCGLNTTATEITVVERIFQLRRDLGGGRANLLQQLRDTLVD 111
>IF6_BETVU (O81920) Eukaryotic translation initiation factor 6 (eIF-6)| (Fragment) Length = 193 Score = 110 bits (274), Expect = 3e-24 Identities = 54/58 (93%), Positives = 56/58 (96%) Frame = -1 Query: 508 EVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVI 335 EVF QTIAGNILVGSYCA +N+GGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVI Sbjct: 136 EVFGQTIAGNILVGSYCAITNKGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVI 193
>IF6_AERPE (Q9YD27) Translation initiation factor 6 (aIF-6)| Length = 233 Score = 71.2 bits (173), Expect = 1e-12 Identities = 36/84 (42%), Positives = 49/84 (58%) Frame = -1 Query: 508 EVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAA 329 EV ++AG VGS +NRGGL HP S E+L LS + +VP AGT+N G E + Sbjct: 142 EVVEGSVAGVYTVGSAIVVTNRGGLAHPDASEEELKFLSDVFKVPFEAGTINFGVEFVRT 201 Query: 328 GMTVNDWTAFCGSDTTATELSVIE 257 G+ N + A G DTT E++ I+ Sbjct: 202 GLVANSYGALVGEDTTGPEIARIQ 225
>IF6_PYRAE (Q8ZTU1) Translation initiation factor 6 (aIF-6)| Length = 220 Score = 65.1 bits (157), Expect = 1e-10 Identities = 36/86 (41%), Positives = 49/86 (56%) Frame = -1 Query: 508 EVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAA 329 EV TIAGN LVG+ ++RG LV P + +DL +LS +V + GTVNRG + Sbjct: 133 EVIVDTIAGNPLVGALAVLNSRGLLVAPEATDDDLKKLSEYFKVRVDVGTVNRGKSFLRG 192 Query: 328 GMTVNDWTAFCGSDTTATELSVIESV 251 G+ VND A G +T EL ++ V Sbjct: 193 GIVVNDNGALVGDETAGPELMRMQQV 218
>IF6_METKA (Q8TUY5) Translation initiation factor 6 (aIF-6)| Length = 221 Score = 61.2 bits (147), Expect = 2e-09 Identities = 33/88 (37%), Positives = 49/88 (55%) Frame = -1 Query: 505 VFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAG 326 V R + G VGS +++G +VHP + E+++ +S +L V + GTVNRGS + G Sbjct: 133 VVRGELGGVKTVGSAGVANSKGAVVHPGATEEEMERVSEVLGVDVEVGTVNRGSPYVGVG 192 Query: 325 MTVNDWTAFCGSDTTATELSVIESVFKL 242 + VN A G DTT EL+ +E L Sbjct: 193 IVVNSKGAVVGEDTTGPELARLEDALYL 220 Score = 33.5 bits (75), Expect = 0.34 Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 1/87 (1%) Frame = -1 Query: 508 EVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTL-LQVPLVAGTVNRGSEVIA 332 EV R T+AG+ LVG+ A ++ G L H ++ + L ++V ++ +N ++ Sbjct: 46 EVVRTTVAGSNLVGALLAVNSNGALFPRHAREHEIRVVRELGVEVDVLPSKMNAVGNLV- 104 Query: 331 AGMTVNDWTAFCGSDTTATELSVIESV 251 ND A D L VIESV Sbjct: 105 ---LTNDHGALVHPDLDDHALEVIESV 128
>IF6_PYRFU (Q8U3S8) Translation initiation factor 6 (aIF-6)| Length = 227 Score = 60.8 bits (146), Expect = 2e-09 Identities = 34/84 (40%), Positives = 46/84 (54%) Frame = -1 Query: 508 EVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAA 329 EV R IAG + VGS +N+GGLVHP + E+L+ LS L +V + GT N G + + Sbjct: 138 EVERGVIAGIVAVGSAGVVTNKGGLVHPEATDEELEWLSDLFKVDVYVGTANMGVPYVGS 197 Query: 328 GMTVNDWTAFCGSDTTATELSVIE 257 M N + G TT E+ IE Sbjct: 198 CMLANSYGVVVGHLTTGPEIVKIE 221
>IF6_SULSO (Q980G0) Translation initiation factor 6 (aIF-6)| Length = 223 Score = 60.5 bits (145), Expect = 3e-09 Identities = 35/84 (41%), Positives = 47/84 (55%) Frame = -1 Query: 508 EVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAA 329 ++ R IA I VGS +N+GGLVH TS ++L EL L V + GTVN GS I + Sbjct: 135 DIKRGKIAQMITVGSVGVITNKGGLVHVDTSEKELKELEKLFGVKIDIGTVNFGSVFIKS 194 Query: 328 GMTVNDWTAFCGSDTTATELSVIE 257 G+ ND G+ TT E+ I+ Sbjct: 195 GLVANDKGTLVGASTTGPEILRIQ 218
>IF6_METMA (Q8PYQ3) Translation initiation factor 6 (aIF-6)| Length = 219 Score = 60.5 bits (145), Expect = 3e-09 Identities = 32/91 (35%), Positives = 49/91 (53%) Frame = -1 Query: 508 EVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAA 329 EV+R TIAG VG +N+G LVHP ++ + + L + +P+ GT N G++++ + Sbjct: 129 EVYRGTIAGIKNVGMAGVVTNKGLLVHPKVTVSEREALEEIFGLPVNIGTTNFGTQMLGS 188 Query: 328 GMTVNDWTAFCGSDTTATELSVIESVFKLRE 236 G+ N GS+TT EL IE E Sbjct: 189 GLLANSKNFVAGSETTGPELGRIEEALGFLE 219 Score = 30.4 bits (67), Expect = 2.9 Identities = 21/77 (27%), Positives = 34/77 (44%) Frame = -1 Query: 472 VGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCG 293 VG+ ++ LVHP S L+ ++ L+V + GT+ V AG+ N Sbjct: 97 VGNIVLANDSAALVHPELSDRALEIIARTLKVEVYRGTIAGIKNVGMAGVVTNK-GLLVH 155 Query: 292 SDTTATELSVIESVFKL 242 T +E +E +F L Sbjct: 156 PKVTVSEREALEEIFGL 172
>IF6_SULAC (P38619) Translation initiation factor 6 (aIF-6)| Length = 223 Score = 58.9 bits (141), Expect = 8e-09 Identities = 34/82 (41%), Positives = 46/82 (56%) Frame = -1 Query: 493 TIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVN 314 TIA I VGS +++ GLVH + E+L +LS L +V L +GTVN GS I +G+ N Sbjct: 140 TIANIITVGSVAVITDKAGLVHIDATEEELKKLSELFKVKLDSGTVNFGSVFIRSGLVAN 199 Query: 313 DWTAFCGSDTTATELSVIESVF 248 GS TT E+ I+ F Sbjct: 200 RNGVLVGSSTTGAEILRIQRAF 221
>IF6_PYRHO (O58264) Translation initiation factor 6 (aIF-6)| Length = 227 Score = 58.9 bits (141), Expect = 8e-09 Identities = 36/84 (42%), Positives = 44/84 (52%) Frame = -1 Query: 508 EVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAA 329 EV R IAG VGS +N+GGLVHP TS E+L+ LS L +V + GT N G + Sbjct: 138 EVERGVIAGLHAVGSAGVVTNKGGLVHPETSDEELEWLSDLFKVDVYVGTANMGVPYVGT 197 Query: 328 GMTVNDWTAFCGSDTTATELSVIE 257 M N G TT E+ IE Sbjct: 198 CMLANSNGVVVGHLTTGPEIVKIE 221
>IF6_SULTO (Q971I4) Translation initiation factor 6 (aIF-6)| Length = 223 Score = 58.2 bits (139), Expect = 1e-08 Identities = 34/82 (41%), Positives = 47/82 (57%) Frame = -1 Query: 493 TIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVN 314 +IA I VGS +++ GLVH T+ E+LD+LS L +V + GTVN GS I +G+ N Sbjct: 140 SIANIITVGSVGVITDKAGLVHIDTTEEELDKLSKLFRVKIDTGTVNFGSAFIHSGLIAN 199 Query: 313 DWTAFCGSDTTATELSVIESVF 248 GS TT E+ I+ F Sbjct: 200 RNGVLVGSATTGPEILRIQRAF 221
>IF6_PYRAB (Q9UYI6) Translation initiation factor 6 (aIF-6)| Length = 227 Score = 57.4 bits (137), Expect = 2e-08 Identities = 36/89 (40%), Positives = 44/89 (49%) Frame = -1 Query: 508 EVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAA 329 EV R IAG VGS +N+GGLVHP S E+L+ LS L +V + GT N G + Sbjct: 138 EVERGLIAGLHAVGSAGVVTNKGGLVHPEASDEELEWLSELFKVDVYVGTANMGVPYVGT 197 Query: 328 GMTVNDWTAFCGSDTTATELSVIESVFKL 242 M N G TT E+ IE L Sbjct: 198 CMLANSNGVVVGHLTTGPEIVKIEEALGL 226
>IF6_METAC (Q8TIN4) Translation initiation factor 6 (aIF-6)| Length = 218 Score = 56.6 bits (135), Expect = 4e-08 Identities = 31/91 (34%), Positives = 47/91 (51%) Frame = -1 Query: 508 EVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAA 329 +V+R TIAG VG +N+G LVHP + + + L + P+ GT N G++++ + Sbjct: 128 DVYRGTIAGIKNVGMAGVVTNKGLLVHPKVTASEREVLEKIFGFPVNIGTTNFGTQMLGS 187 Query: 328 GMTVNDWTAFCGSDTTATELSVIESVFKLRE 236 G+ N GS+TT EL IE E Sbjct: 188 GLLANSKNFVAGSETTGPELGRIEEALGFLE 218 Score = 33.1 bits (74), Expect = 0.44 Identities = 22/75 (29%), Positives = 36/75 (48%) Frame = -1 Query: 472 VGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCG 293 VG+ ++ LVHP S + L+ ++ L+V + GT+ V AG+ N Sbjct: 96 VGNIVFANDSAALVHPDLSDKALEAIARTLKVDVYRGTIAGIKNVGMAGVVTNK-GLLVH 154 Query: 292 SDTTATELSVIESVF 248 TA+E V+E +F Sbjct: 155 PKVTASEREVLEKIF 169
>IF6_ARCFU (O28214) Translation initiation factor 6 (aIF-6)| Length = 215 Score = 55.5 bits (132), Expect = 8e-08 Identities = 27/84 (32%), Positives = 47/84 (55%) Frame = -1 Query: 508 EVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAA 329 E+ + T+ G VG +NRGGL +P+ + + +L + V ++ GTVN G++++ + Sbjct: 127 ELVKGTVGGIKTVGMAAVVTNRGGLANPNINEWEAKKLQEVAGVEVLTGTVNFGTDMVGS 186 Query: 328 GMTVNDWTAFCGSDTTATELSVIE 257 G+ N G DTT EL ++E Sbjct: 187 GLVANSKGYVVGRDTTGFELGIVE 210
>IF6_PYRKO (Q5JGT4) Translation initiation factor 6 (aIF-6)| Length = 229 Score = 55.5 bits (132), Expect = 8e-08 Identities = 33/84 (39%), Positives = 43/84 (51%) Frame = -1 Query: 508 EVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAA 329 EV R IA VGS +N+GGLVHP + E+L+ LS L V + GT N G + + Sbjct: 139 EVERGMIASYRSVGSVGVVTNKGGLVHPEATDEELEWLSDLFGVDIYVGTANMGVPFVGS 198 Query: 328 GMTVNDWTAFCGSDTTATELSVIE 257 M N + G TT E+ IE Sbjct: 199 CMLANSYGVVVGHLTTGPEIVKIE 222
>IF6_METTH (O27648) Translation initiation factor 6 (aIF-6)| Length = 222 Score = 55.5 bits (132), Expect = 8e-08 Identities = 33/87 (37%), Positives = 44/87 (50%) Frame = -1 Query: 493 TIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVN 314 T+AG +VGS A +NRG L++P S E++ + L V GTVN G +I A N Sbjct: 136 TLAGLNIVGSMGAATNRGALLNPQASSEEIGIIEDTLGVEADVGTVNHGVTLIGACSVAN 195 Query: 313 DWTAFCGSDTTATELSVIESVFKLREG 233 G +TT EL+ IE EG Sbjct: 196 SNGVLVGEETTGPELARIEEALGFLEG 222
>IF6_THEAC (Q9HM16) Translation initiation factor 6 (aIF-6)| Length = 216 Score = 52.4 bits (124), Expect = 7e-07 Identities = 29/86 (33%), Positives = 44/86 (51%) Frame = -1 Query: 508 EVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAA 329 E R TI + VGS +++G LV+P T ++L+ L +V + +GT N GS + A Sbjct: 129 ETIRTTIGNILTVGSAGILTSKGMLVNPETDDDELEFLRDFFKVSVKSGTANFGSIYVGA 188 Query: 328 GMTVNDWTAFCGSDTTATELSVIESV 251 + N G DTT E+ I+ V Sbjct: 189 SIVANSKGVLVGKDTTPIEMDRIDDV 214
>IF6_METJA (Q60357) Translation initiation factor 6 (aIF-6)| Length = 228 Score = 52.0 bits (123), Expect = 9e-07 Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 1/90 (1%) Frame = -1 Query: 508 EVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVA-GTVNRGSEVIA 332 EV TIA VGS +N+G L HP ++L+ L +L +V + GT N+G+ + Sbjct: 138 EVEIGTIAELPTVGSNAVVTNKGCLTHPLVEDDELEFLKSLFKVEYIGKGTANKGTTSVG 197 Query: 331 AGMTVNDWTAFCGSDTTATELSVIESVFKL 242 A + N A G DTT EL +IE L Sbjct: 198 ACIIANSKGAVVGGDTTGPELLIIEDALGL 227
>IF6_THEVO (Q97CU0) Translation initiation factor 6 (aIF-6)| Length = 218 Score = 51.6 bits (122), Expect = 1e-06 Identities = 28/86 (32%), Positives = 44/86 (51%) Frame = -1 Query: 508 EVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAA 329 E R +I + VGS +++G LV+P T ++L+ L +V + +GT N GS + A Sbjct: 131 ETIRTSIGNILTVGSASVLTSKGMLVNPETDDDELEFLKDFFKVSVKSGTANFGSIYVGA 190 Query: 328 GMTVNDWTAFCGSDTTATELSVIESV 251 + N G DTT E+ I+ V Sbjct: 191 SIVANSKGILVGRDTTPIEIDRIDDV 216
>IF6_PICTO (Q6L2L0) Translation initiation factor 6 (aIF-6)| Length = 217 Score = 45.4 bits (106), Expect = 9e-05 Identities = 27/84 (32%), Positives = 41/84 (48%) Frame = -1 Query: 508 EVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAA 329 E + +IAG VGS ++RG LV +++ LS L ++ + GT N GS + A Sbjct: 130 ETVKGSIAGIKTVGSVAVLNDRGMLVTSEADEDEIKYLSDLFKINVKTGTANFGSNYVGA 189 Query: 328 GMTVNDWTAFCGSDTTATELSVIE 257 + N G TT+ EL I+ Sbjct: 190 SIIANSNGILVGEATTSIELGRID 213
>IF6_METMP (Q6M156) Translation initiation factor 6 (aIF-6)| Length = 227 Score = 43.1 bits (100), Expect = 4e-04 Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Frame = -1 Query: 472 VGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVA-GTVNRGSEVIAAGMTVNDWTAFC 296 VGS +++G LVHP T +L+ + +L+V V GT NRG + A + N A Sbjct: 148 VGSNGVATDKGCLVHPLTDELELEWIQDILRVDYVERGTANRGVTSVGACILANTKGAVV 207 Query: 295 GSDTTATELSVIESVFKL 242 G DT+ E+ IE L Sbjct: 208 GGDTSGPEILKIEEALDL 225
>EFG2_YEAST (P39677) Elongation factor G 2, mitochondrial precursor (mEF-G-2)| Length = 819 Score = 32.0 bits (71), Expect = 0.98 Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 1/105 (0%) Frame = +2 Query: 164 PFDHLDVAVNQR-LPHVIDDRRGLAFSQLEDALDDGELGSGCV*ATEGSPVVHRHARSND 340 P +LD+ + Q + V+ D G +Q+ D+ + + +R +D Sbjct: 687 PIMNLDLTIPQSDVGTVLQDLTGARKAQILSIEDESSVSNSGASTCNSPENSNRIYIPSD 746 Query: 341 LATTVHGSRDKRDLEECGQLIKIFNGCVRMDQSTPVRECTVAPNK 475 TT+H ++DK++ +E +K + P+RE T NK Sbjct: 747 AVTTLHATKDKKNTQETSSNVKKI-----IKAKVPLREITTYTNK 786
>FSCN3_MOUSE (Q9QXW4) Fascin-3 (Testis fascin)| Length = 498 Score = 31.6 bits (70), Expect = 1.3 Identities = 15/46 (32%), Positives = 24/46 (52%) Frame = +2 Query: 305 SPVVHRHARSNDLATTVHGSRDKRDLEECGQLIKIFNGCVRMDQST 442 SP+ H +AR++ + LEECG L+ +GC ++ ST Sbjct: 150 SPIYHSYARADHTVGRIWVDAAIPCLEECGFLLHFQDGCYHLETST 195
>MBX1_SCHPO (O42954) MADS-box transcription factor 1| Length = 436 Score = 30.8 bits (68), Expect = 2.2 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = +2 Query: 77 RRYTRSKSLDGHVFLLLSTKSTVQEPHPMPFDHLDVAVNQRLPHVIDDRRG 229 R +T S+DG + S S +P P LD A+NQ P + D G Sbjct: 255 RLHTSHASIDGLTDFIQSPSSGYLDPSSTPITPLDSAINQITPPFLPDNLG 305
>THIL_METJA (Q60337) Probable thiamine-monophosphate kinase (EC 2.7.4.16)| (Thiamine-phosphate kinase) Length = 319 Score = 30.4 bits (67), Expect = 2.9 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = -1 Query: 406 LDELSTLLQVPLVAGTVNRGSEVIAAG 326 LD+ S L P+V G NRG E+I +G Sbjct: 107 LDDFSKLYDCPVVGGDTNRGDELILSG 133
>ACDB_METTH (O27745) Acetyl-CoA decarbonylase/synthase complex beta subunit (EC| 2.3.1.-) (ACDS complex beta subunit) (ACDS complex acyltransferase) Length = 460 Score = 30.4 bits (67), Expect = 2.9 Identities = 13/53 (24%), Positives = 23/53 (43%) Frame = +2 Query: 338 DLATTVHGSRDKRDLEECGQLIKIFNGCVRMDQSTPVRECTVAPNKDISCNCL 496 + A + +RD R E + + +F GC+ P C V P++ C + Sbjct: 161 ETAREKYETRDSRARELSDEDVDVFYGCLMCQSFAPTHVCIVTPDRTALCGAI 213
>ACDB1_METTE (P72021) Acetyl-CoA decarbonylase/synthase complex beta subunit 1| (EC 2.3.1.-) (ACDS complex beta subunit 1) (ACDS complex acyltransferase 1) Length = 468 Score = 30.0 bits (66), Expect = 3.7 Identities = 13/53 (24%), Positives = 24/53 (45%) Frame = +2 Query: 338 DLATTVHGSRDKRDLEECGQLIKIFNGCVRMDQSTPVRECTVAPNKDISCNCL 496 +LA + +RD R + + + +F GC P C V+P++ C + Sbjct: 161 ELAKEIFKARDARTKDLHDEDVDVFYGCTLCQSFAPTNVCVVSPDRISLCGAI 213
>ACDB2_METMA (Q8PV85) Acetyl-CoA decarbonylase/synthase complex beta subunit 2| (EC 2.3.1.-) (ACDS complex beta subunit 2) (ACDS complex acyltransferase 2) Length = 470 Score = 28.9 bits (63), Expect = 8.3 Identities = 12/53 (22%), Positives = 24/53 (45%) Frame = +2 Query: 338 DLATTVHGSRDKRDLEECGQLIKIFNGCVRMDQSTPVRECTVAPNKDISCNCL 496 + A + +RD R + + +++F GC P C V+P++ C + Sbjct: 163 ETAKEIFKARDARTKDLHDEDVEVFYGCTLCQSFAPTNVCVVSPDRISLCGAI 215
>ACDB2_METAC (Q8TJC4) Acetyl-CoA decarbonylase/synthase complex beta subunit 2| (EC 2.3.1.-) (ACDS complex beta subunit 2) (ACDS complex acyltransferase 2) Length = 470 Score = 28.9 bits (63), Expect = 8.3 Identities = 12/51 (23%), Positives = 23/51 (45%) Frame = +2 Query: 344 ATTVHGSRDKRDLEECGQLIKIFNGCVRMDQSTPVRECTVAPNKDISCNCL 496 A + +RD+R + + + +F GC P C V+P++ C + Sbjct: 164 AKAIFKARDERTKDLHDEDVDVFYGCTLCQSFAPTNVCVVSPDRVSLCGAI 214
>VP67_NPVCF (P41717) Major envelope glycoprotein precursor (gp67)| Length = 509 Score = 28.9 bits (63), Expect = 8.3 Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 3/60 (5%) Frame = -1 Query: 508 EVFRQTIAGNILVGS---YCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEV 338 E+ + N+++G Y A++ GG + P+T IE+ E + + L+ ++ R EV Sbjct: 51 EIVETNMDENVIIGYKGYYQAYAYNGGSLDPNTRIEETMETLNVAKEDLLMWSIRRQCEV 110
>ACDB2_METJA (Q57620) Acetyl-CoA decarbonylase/synthase complex beta subunit 2| (EC 2.3.1.-) (ACDS complex beta subunit 2) (ACDS complex acyltransferase 2) Length = 469 Score = 28.9 bits (63), Expect = 8.3 Identities = 11/48 (22%), Positives = 21/48 (43%) Frame = +2 Query: 344 ATTVHGSRDKRDLEECGQLIKIFNGCVRMDQSTPVRECTVAPNKDISC 487 A ++ RD++ + + +F GCV P C + P++ C Sbjct: 162 AREIYNKRDEKTKALHEEDVDVFYGCVMCQSFAPTHVCVITPDRPALC 209
>ACDB1_METMA (Q8PZ11) Acetyl-CoA decarbonylase/synthase complex beta subunit 1| (EC 2.3.1.-) (ACDS complex beta subunit 1) (ACDS complex acyltransferase 1) Length = 469 Score = 28.9 bits (63), Expect = 8.3 Identities = 12/53 (22%), Positives = 24/53 (45%) Frame = +2 Query: 338 DLATTVHGSRDKRDLEECGQLIKIFNGCVRMDQSTPVRECTVAPNKDISCNCL 496 + A + +RD R + + +++F GC P C V+P++ C + Sbjct: 162 ETAKEIFKARDARTKDLHDEDVEVFYGCTLCQSFAPTNVCVVSPDRISLCGAI 214
>ACDB1_METAC (Q8TRZ6) Acetyl-CoA decarbonylase/synthase complex beta subunit 1| (EC 2.3.1.-) (ACDS complex beta subunit 1) (ACDS complex acyltransferase 1) Length = 469 Score = 28.9 bits (63), Expect = 8.3 Identities = 12/53 (22%), Positives = 24/53 (45%) Frame = +2 Query: 338 DLATTVHGSRDKRDLEECGQLIKIFNGCVRMDQSTPVRECTVAPNKDISCNCL 496 + A + +RD+R + + + +F GC P C V+P++ C + Sbjct: 162 ETAKEIFKARDERTKDLHDEDVDVFYGCTLCQSFAPTNVCVVSPDRVSLCGAI 214
>RL5_SYNPX (Q7U4I8) 50S ribosomal protein L5| Length = 179 Score = 28.9 bits (63), Expect = 8.3 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 6/71 (8%) Frame = -1 Query: 397 LSTLLQVP-LVAGTVNRGSEVIAAGM-----TVNDWTAFCGSDTTATELSVIESVFKLRE 236 L+ + +VP +V TVNRG AA +VN+ G T + FK+R+ Sbjct: 21 LTNIHEVPKVVKVTVNRGLGEAAANAKSLEASVNELAQITGQKVVVTRAKKAIAAFKIRQ 80 Query: 235 GQPTAIVDDMR 203 G P +R Sbjct: 81 GMPIGCAVTLR 91
>NTDB_BACSU (O07565) NTD biosynthesis operon putative hydrolase ntdB (EC| 3.-.-.-) Length = 286 Score = 28.9 bits (63), Expect = 8.3 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Frame = +2 Query: 131 TKSTVQEPHPMPFDHLDVAVNQRLPHVIDDRRGLAFSQLEDALD----DGELGSGCV 289 T STV+ P + F D PH ID+++ +LED L+ DGEL G V Sbjct: 11 TLSTVEHPQYIVFCDFDETY---FPHTIDEQKQQDIYELEDYLEQKSKDGELIIGWV 64
>RDRP_BSNV (Q8AZL8) RNA-directed RNA polymerase (EC 2.7.7.48) (RDRP) (Protein| VP1) Length = 867 Score = 28.9 bits (63), Expect = 8.3 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 6/48 (12%) Frame = +2 Query: 158 PMPFDHLDVAVNQRLPHVI------DDRRGLAFSQLEDALDDGELGSG 283 P PF H DVA+ +++ + + + G F Q D + + + GSG Sbjct: 118 PTPFGHYDVALLKQMTYQLTNGKDNPEEEGTTFRQFRDTIVEQQYGSG 165 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,085,345 Number of Sequences: 219361 Number of extensions: 1535784 Number of successful extensions: 4491 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 4370 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4489 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3696665728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
