Clone Name | rbart09g07 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_479285.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1058 Score = 339 bits (171), Expect = 5e-90 Identities = 276/311 (88%) Strand = Plus / Minus Query: 198 gacttcctcatgtcatcgacgatcgccgtgggctggccttctctcaacttgaagacgctc 257 ||||||||||||||||| || ||||| | ||||| |||||||||| ||||||||||||| Sbjct: 849 gacttcctcatgtcatcaacaatcgcggcaggctgcccttctctcagcttgaagacgctc 790 Query: 258 tcgatgacggagagctcggtagcggttgtgtctgagccacagaaggcagtccagtcgttc 317 || ||||| || ||||| ||||| || ||||||||||||||||| ||||||||||| ||| Sbjct: 789 tcaatgaccgatagctcagtagccgtagtgtctgagccacagaaagcagtccagtcattc 730 Query: 318 accgtcatgcccgcagcaatgacctcgctaccacggttcacggttcccgcgacaagaggg 377 || |||||||||||||||||||||||||| || |||||||||||||| || ||||||||| Sbjct: 729 actgtcatgcccgcagcaatgacctcgctgcctcggttcacggttccagcaacaagaggg 670 Query: 378 acttggaggagtgtggacagctcatcaagatcttcaatggatgtgtgaggatggaccagt 437 ||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 669 acttgcaggagcgtggacagctcatcaagatcttcaatggatgtatgaggatggactagg 610 Query: 438 ccacccctgttagagaatgcacagtagctcccaacaaggatatttcctgcaattgtctga 497 ||||||||||| | | ||||||||||| || |||||||| ||||||||||||||||| Sbjct: 609 ccacccctgtttgtaatcgcacagtagcttcccacaaggatgtttcctgcaattgtctgc 550 Query: 498 cggaatacctc 508 ||||| ||||| Sbjct: 549 cggaacacctc 539
>ref|XM_506503.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1340_C08.131 mRNA Length = 1102 Score = 339 bits (171), Expect = 5e-90 Identities = 276/311 (88%) Strand = Plus / Minus Query: 198 gacttcctcatgtcatcgacgatcgccgtgggctggccttctctcaacttgaagacgctc 257 ||||||||||||||||| || ||||| | ||||| |||||||||| ||||||||||||| Sbjct: 874 gacttcctcatgtcatcaacaatcgcggcaggctgcccttctctcagcttgaagacgctc 815 Query: 258 tcgatgacggagagctcggtagcggttgtgtctgagccacagaaggcagtccagtcgttc 317 || ||||| || ||||| ||||| || ||||||||||||||||| ||||||||||| ||| Sbjct: 814 tcaatgaccgatagctcagtagccgtagtgtctgagccacagaaagcagtccagtcattc 755 Query: 318 accgtcatgcccgcagcaatgacctcgctaccacggttcacggttcccgcgacaagaggg 377 || |||||||||||||||||||||||||| || |||||||||||||| || ||||||||| Sbjct: 754 actgtcatgcccgcagcaatgacctcgctgcctcggttcacggttccagcaacaagaggg 695 Query: 378 acttggaggagtgtggacagctcatcaagatcttcaatggatgtgtgaggatggaccagt 437 ||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 694 acttgcaggagcgtggacagctcatcaagatcttcaatggatgtatgaggatggactagg 635 Query: 438 ccacccctgttagagaatgcacagtagctcccaacaaggatatttcctgcaattgtctga 497 ||||||||||| | | ||||||||||| || |||||||| ||||||||||||||||| Sbjct: 634 ccacccctgtttgtaatcgcacagtagcttcccacaaggatgtttcctgcaattgtctgc 575 Query: 498 cggaatacctc 508 ||||| ||||| Sbjct: 574 cggaacacctc 564
>dbj|AK104592.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-B01, full insert sequence Length = 1058 Score = 339 bits (171), Expect = 5e-90 Identities = 276/311 (88%) Strand = Plus / Minus Query: 198 gacttcctcatgtcatcgacgatcgccgtgggctggccttctctcaacttgaagacgctc 257 ||||||||||||||||| || ||||| | ||||| |||||||||| ||||||||||||| Sbjct: 849 gacttcctcatgtcatcaacaatcgcggcaggctgcccttctctcagcttgaagacgctc 790 Query: 258 tcgatgacggagagctcggtagcggttgtgtctgagccacagaaggcagtccagtcgttc 317 || ||||| || ||||| ||||| || ||||||||||||||||| ||||||||||| ||| Sbjct: 789 tcaatgaccgatagctcagtagccgtagtgtctgagccacagaaagcagtccagtcattc 730 Query: 318 accgtcatgcccgcagcaatgacctcgctaccacggttcacggttcccgcgacaagaggg 377 || |||||||||||||||||||||||||| || |||||||||||||| || ||||||||| Sbjct: 729 actgtcatgcccgcagcaatgacctcgctgcctcggttcacggttccagcaacaagaggg 670 Query: 378 acttggaggagtgtggacagctcatcaagatcttcaatggatgtgtgaggatggaccagt 437 ||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 669 acttgcaggagcgtggacagctcatcaagatcttcaatggatgtatgaggatggactagg 610 Query: 438 ccacccctgttagagaatgcacagtagctcccaacaaggatatttcctgcaattgtctga 497 ||||||||||| | | ||||||||||| || |||||||| ||||||||||||||||| Sbjct: 609 ccacccctgtttgtaatcgcacagtagcttcccacaaggatgtttcctgcaattgtctgc 550 Query: 498 cggaatacctc 508 ||||| ||||| Sbjct: 549 cggaacacctc 539
>dbj|AK104739.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D07, full insert sequence Length = 1058 Score = 339 bits (171), Expect = 5e-90 Identities = 276/311 (88%) Strand = Plus / Minus Query: 198 gacttcctcatgtcatcgacgatcgccgtgggctggccttctctcaacttgaagacgctc 257 ||||||||||||||||| || ||||| | ||||| |||||||||| ||||||||||||| Sbjct: 849 gacttcctcatgtcatcaacaatcgcggcaggctgcccttctctcagcttgaagacgctc 790 Query: 258 tcgatgacggagagctcggtagcggttgtgtctgagccacagaaggcagtccagtcgttc 317 || ||||| || ||||| ||||| || ||||||||||||||||| ||||||||||| ||| Sbjct: 789 tcaatgaccgatagctcagtagccgtagtgtctgagccacagaaagcagtccagtcattc 730 Query: 318 accgtcatgcccgcagcaatgacctcgctaccacggttcacggttcccgcgacaagaggg 377 || |||||||||||||||||||||||||| || |||||||||||||| || ||||||||| Sbjct: 729 actgtcatgcccgcagcaatgacctcgctgcctcggttcacggttccagcaacaagaggg 670 Query: 378 acttggaggagtgtggacagctcatcaagatcttcaatggatgtgtgaggatggaccagt 437 ||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 669 acttgcaggagcgtggacagctcatcaagatcttcaatggatgtatgaggatggactagg 610 Query: 438 ccacccctgttagagaatgcacagtagctcccaacaaggatatttcctgcaattgtctga 497 ||||||||||| | | ||||||||||| || |||||||| ||||||||||||||||| Sbjct: 609 ccacccctgtttgtaatcgcacagtagcttcccacaaggatgtttcctgcaattgtctgc 550 Query: 498 cggaatacctc 508 ||||| ||||| Sbjct: 549 cggaacacctc 539
>dbj|AK074012.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033074A21, full insert sequence Length = 1102 Score = 339 bits (171), Expect = 5e-90 Identities = 276/311 (88%) Strand = Plus / Minus Query: 198 gacttcctcatgtcatcgacgatcgccgtgggctggccttctctcaacttgaagacgctc 257 ||||||||||||||||| || ||||| | ||||| |||||||||| ||||||||||||| Sbjct: 874 gacttcctcatgtcatcaacaatcgcggcaggctgcccttctctcagcttgaagacgctc 815 Query: 258 tcgatgacggagagctcggtagcggttgtgtctgagccacagaaggcagtccagtcgttc 317 || ||||| || ||||| ||||| || ||||||||||||||||| ||||||||||| ||| Sbjct: 814 tcaatgaccgatagctcagtagccgtagtgtctgagccacagaaagcagtccagtcattc 755 Query: 318 accgtcatgcccgcagcaatgacctcgctaccacggttcacggttcccgcgacaagaggg 377 || |||||||||||||||||||||||||| || |||||||||||||| || ||||||||| Sbjct: 754 actgtcatgcccgcagcaatgacctcgctgcctcggttcacggttccagcaacaagaggg 695 Query: 378 acttggaggagtgtggacagctcatcaagatcttcaatggatgtgtgaggatggaccagt 437 ||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 694 acttgcaggagcgtggacagctcatcaagatcttcaatggatgtatgaggatggactagg 635 Query: 438 ccacccctgttagagaatgcacagtagctcccaacaaggatatttcctgcaattgtctga 497 ||||||||||| | | ||||||||||| || |||||||| ||||||||||||||||| Sbjct: 634 ccacccctgtttgtaatcgcacagtagcttcccacaaggatgtttcctgcaattgtctgc 575 Query: 498 cggaatacctc 508 ||||| ||||| Sbjct: 574 cggaacacctc 564
>gb|BT016214.1| Zea mays clone Contig47 mRNA sequence Length = 1121 Score = 311 bits (157), Expect = 1e-81 Identities = 277/317 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 847 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 788 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 787 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 728 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 727 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 668 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 667 gttcctgcgacaagaggaacttggaggagcgtggagagctcgtcaaggtcttcaacggat 608 Query: 420 gtgtgaggatggaccagtccacccctgttagagaatgcacagtagctcccaacaaggata 479 || || ||||| |||| ||||||||||||||||| || ||||| ||||| ||||||||| Sbjct: 607 gtatggggatgaaccaaaccacccctgttagagaaggcgcagtaactccccacaaggata 548 Query: 480 tttcctgcaattgtctg 496 ||||| ||||| ||||| Sbjct: 547 tttccagcaatagtctg 531
>gb|AY104396.1| Zea mays PCO098475 mRNA sequence Length = 1233 Score = 311 bits (157), Expect = 1e-81 Identities = 277/317 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 911 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 852 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 851 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 792 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 791 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 732 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 731 gttcctgcgacaagaggaacttggaggagcgtggagagctcgtcaaggtcttcaacggat 672 Query: 420 gtgtgaggatggaccagtccacccctgttagagaatgcacagtagctcccaacaaggata 479 || || ||||| |||| ||||||||||||||||| || ||||| ||||| ||||||||| Sbjct: 671 gtatggggatgaaccaaaccacccctgttagagaaggcgcagtaactccccacaaggata 612 Query: 480 tttcctgcaattgtctg 496 ||||| ||||| ||||| Sbjct: 611 tttccagcaatagtctg 595
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 287 bits (145), Expect = 2e-74 Identities = 214/237 (90%) Strand = Plus / Minus Query: 198 gacttcctcatgtcatcgacgatcgccgtgggctggccttctctcaacttgaagacgctc 257 ||||||||||||||||| || ||||| | ||||| |||||||||| ||||||||||||| Sbjct: 26577450 gacttcctcatgtcatcaacaatcgcggcaggctgcccttctctcagcttgaagacgctc 26577391 Query: 258 tcgatgacggagagctcggtagcggttgtgtctgagccacagaaggcagtccagtcgttc 317 || ||||| || ||||| ||||| || ||||||||||||||||| ||||||||||| ||| Sbjct: 26577390 tcaatgaccgatagctcagtagccgtagtgtctgagccacagaaagcagtccagtcattc 26577331 Query: 318 accgtcatgcccgcagcaatgacctcgctaccacggttcacggttcccgcgacaagaggg 377 || |||||||||||||||||||||||||| || |||||||||||||| || ||||||||| Sbjct: 26577330 actgtcatgcccgcagcaatgacctcgctgcctcggttcacggttccagcaacaagaggg 26577271 Query: 378 acttggaggagtgtggacagctcatcaagatcttcaatggatgtgtgaggatggacc 434 ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 26577270 acttgcaggagcgtggacagctcatcaagatcttcaatggatgtatgaggatggacc 26577214 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 456 gcacagtagctcccaacaaggatatttcctgcaattgtctgacggaatacctc 508 ||||||||||| || |||||||| ||||||||||||||||| ||||| ||||| Sbjct: 26577104 gcacagtagcttcccacaaggatgtttcctgcaattgtctgccggaacacctc 26577052
>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1340_C08 Length = 192167 Score = 287 bits (145), Expect = 2e-74 Identities = 214/237 (90%) Strand = Plus / Minus Query: 198 gacttcctcatgtcatcgacgatcgccgtgggctggccttctctcaacttgaagacgctc 257 ||||||||||||||||| || ||||| | ||||| |||||||||| ||||||||||||| Sbjct: 122721 gacttcctcatgtcatcaacaatcgcggcaggctgcccttctctcagcttgaagacgctc 122662 Query: 258 tcgatgacggagagctcggtagcggttgtgtctgagccacagaaggcagtccagtcgttc 317 || ||||| || ||||| ||||| || ||||||||||||||||| ||||||||||| ||| Sbjct: 122661 tcaatgaccgatagctcagtagccgtagtgtctgagccacagaaagcagtccagtcattc 122602 Query: 318 accgtcatgcccgcagcaatgacctcgctaccacggttcacggttcccgcgacaagaggg 377 || |||||||||||||||||||||||||| || |||||||||||||| || ||||||||| Sbjct: 122601 actgtcatgcccgcagcaatgacctcgctgcctcggttcacggttccagcaacaagaggg 122542 Query: 378 acttggaggagtgtggacagctcatcaagatcttcaatggatgtgtgaggatggacc 434 ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 122541 acttgcaggagcgtggacagctcatcaagatcttcaatggatgtatgaggatggacc 122485 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 456 gcacagtagctcccaacaaggatatttcctgcaattgtctgacggaatacctc 508 ||||||||||| || |||||||| ||||||||||||||||| ||||| ||||| Sbjct: 122375 gcacagtagcttcccacaaggatgtttcctgcaattgtctgccggaacacctc 122323
>gb|AF377492.1| Zea mays subsp. mays isolate B73 RFLP marker sequence Length = 557 Score = 252 bits (127), Expect = 1e-63 Identities = 220/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttggaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AF377491.1| Zea mays subsp. mays isolate NC258 RFLP marker sequence Length = 557 Score = 252 bits (127), Expect = 1e-63 Identities = 220/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttggaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AF377490.1| Zea mays subsp. mays isolate T8 RFLP marker sequence Length = 557 Score = 252 bits (127), Expect = 1e-63 Identities = 220/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttggaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AF377489.1| Zea mays subsp. mays isolate Ky21 RFLP marker sequence Length = 557 Score = 252 bits (127), Expect = 1e-63 Identities = 220/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttggaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AF377487.1| Zea mays subsp. mays isolate W153R RFLP marker sequence Length = 557 Score = 252 bits (127), Expect = 1e-63 Identities = 220/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttggaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AF377486.1| Zea mays subsp. mays isolate OH43 RFLP marker sequence Length = 557 Score = 252 bits (127), Expect = 1e-63 Identities = 220/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttggaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AF377485.1| Zea mays subsp. mays isolate Mo17 RFLP marker sequence Length = 557 Score = 252 bits (127), Expect = 1e-63 Identities = 220/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttggaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AF377484.1| Zea mays subsp. mays isolate Mo24W RFLP marker sequence Length = 557 Score = 252 bits (127), Expect = 1e-63 Identities = 220/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttggaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AF377483.1| Zea mays subsp. mays isolate GUA14 RFLP marker sequence Length = 557 Score = 252 bits (127), Expect = 1e-63 Identities = 220/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttggaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AF377479.1| Zea mays subsp. mays isolate URGII RFLP marker sequence Length = 557 Score = 252 bits (127), Expect = 1e-63 Identities = 220/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttggaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AF377478.1| Zea mays subsp. mays isolate SAN329 RFLP marker sequence Length = 557 Score = 252 bits (127), Expect = 1e-63 Identities = 220/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttggaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AF377477.1| Zea mays subsp. mays isolate MEX48 RFLP marker sequence Length = 557 Score = 252 bits (127), Expect = 1e-63 Identities = 220/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttggaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AF377476.1| Zea mays subsp. mays isolate CHI349 RFLP marker sequence Length = 557 Score = 252 bits (127), Expect = 1e-63 Identities = 220/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttggaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AF377475.1| Zea mays subsp. mays isolate SIN2 RFLP marker sequence Length = 557 Score = 252 bits (127), Expect = 1e-63 Identities = 220/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttggaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AF377473.1| Zea mays subsp. mays isolate PI213793 RFLP marker sequence Length = 557 Score = 252 bits (127), Expect = 1e-63 Identities = 220/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttggaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AF377470.1| Zea mays subsp. mays isolate MAG450 RFLP marker sequence Length = 557 Score = 252 bits (127), Expect = 1e-63 Identities = 220/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttggaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AF377469.1| Zea mays subsp. mays isolate YUC7 RFLP marker sequence Length = 557 Score = 252 bits (127), Expect = 1e-63 Identities = 220/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttggaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AF377468.1| Zea mays subsp. mays isolate APC13 RFLP marker sequence Length = 557 Score = 252 bits (127), Expect = 1e-63 Identities = 220/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttggaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AY514592.1| Zea mays subsp. mexicana voucher PI566681 RFLP marker csu1132 Length = 557 Score = 252 bits (127), Expect = 1e-63 Identities = 220/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttggaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AY514591.1| Zea mays subsp. parviglumis voucher PI566688 RFLP marker csu1132 Length = 557 Score = 252 bits (127), Expect = 1e-63 Identities = 220/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttggaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AY514587.1| Zea mays subsp. parviglumis voucher Site4 RFLP marker csu1132 Length = 555 Score = 252 bits (127), Expect = 1e-63 Identities = 220/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 367 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 308 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| ||||||||||||||||||||| ||||||||||| || || ||||| |||||||| Sbjct: 307 ctcagcttgaagacgctctcgatgactgagagctcggtggccgtggtgtccgagccacaa 248 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 247 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 188 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 187 gttcctgcgacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacggat 128 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 127 gtatggggatg 117
>gb|AY514585.1| Zea mays subsp. parviglumis voucher Site3 RFLP marker csu1132 Length = 557 Score = 252 bits (127), Expect = 1e-63 Identities = 220/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttggaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AY514576.1| Zea mays subsp. mexicana voucher PI566677 RFLP marker csu1132 Length = 557 Score = 252 bits (127), Expect = 1e-63 Identities = 220/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttggaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AF377482.1| Zea mays subsp. mays isolate PUE32 RFLP marker sequence Length = 566 Score = 244 bits (123), Expect = 2e-61 Identities = 219/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AF377481.1| Zea mays subsp. mays isolate GUA131 RFLP marker sequence Length = 564 Score = 244 bits (123), Expect = 2e-61 Identities = 219/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 373 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 314 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| ||||||||||||||||||||| ||||||||||| || || ||||| |||||||| Sbjct: 313 ctcagcttgaagacgctctcgatgactgagagctcggtggccgtcgtgtccgagccacaa 254 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 253 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 194 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| || |||||||| ||||| ||||| ||||| ||||| ||||| ||||||| ||| Sbjct: 193 gttcctgcaacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacagat 134 Query: 420 gtgtgaggatg 430 || |||||||| Sbjct: 133 gtatgaggatg 123
>gb|AF377480.1| Zea mays subsp. mays isolate OAX68 RFLP marker sequence Length = 566 Score = 244 bits (123), Expect = 2e-61 Identities = 219/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AF377471.1| Zea mays subsp. mays isolate OAX70 RFLP marker sequence Length = 563 Score = 244 bits (123), Expect = 2e-61 Identities = 219/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 372 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 313 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| ||||||||||||||||||||| ||||||||||| || || ||||| |||||||| Sbjct: 312 ctcagcttgaagacgctctcgatgactgagagctcggtggccgtcgtgtccgagccacaa 253 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 252 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 193 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| || |||||||| ||||| ||||| ||||| ||||| ||||| ||||||| ||| Sbjct: 192 gttcctgcaacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacagat 133 Query: 420 gtgtgaggatg 430 || |||||||| Sbjct: 132 gtatgaggatg 122
>gb|AY514590.1| Zea mays subsp. parviglumis voucher PI331786 RFLP marker csu1132 Length = 566 Score = 244 bits (123), Expect = 2e-61 Identities = 219/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AY514589.1| Zea mays subsp. parviglumis voucher PI331783 RFLP marker csu1132 Length = 541 Score = 244 bits (123), Expect = 2e-61 Identities = 219/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 358 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 299 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 298 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 239 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 238 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 179 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 178 gttcctgcgacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacggat 119 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 118 gtatggggatg 108
>gb|AY514586.1| Zea mays subsp. parviglumis voucher PI331788 RFLP marker csu1132 Length = 557 Score = 244 bits (123), Expect = 2e-61 Identities = 219/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AY514583.1| Zea mays subsp. mexicana voucher s.n.2 RFLP marker csu1132 Length = 557 Score = 244 bits (123), Expect = 2e-61 Identities = 219/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AY514581.1| Zea mays subsp. mexicana voucher 5630 RFLP marker csu1132 Length = 566 Score = 244 bits (123), Expect = 2e-61 Identities = 219/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AY514574.1| Zea luxurians voucher G-27 RFLP marker csu1132 Length = 557 Score = 244 bits (123), Expect = 2e-61 Identities = 219/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AY514572.1| Zea luxurians voucher G-38 RFLP marker csu1132 Length = 565 Score = 244 bits (123), Expect = 2e-61 Identities = 219/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 373 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 314 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| ||||||||||||||||||||| ||||||||||| || || ||||| |||||||| Sbjct: 313 ctcagcttgaagacgctctcgatgactgagagctcggtggctgtcgtgtccgagccacaa 254 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 253 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 194 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| || |||||||| ||||| ||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 193 gttcctgcaacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacggat 134 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 133 gtatggggatg 123
>gb|AY514571.1| Zea luxurians voucher G-5 RFLP marker csu1132 Length = 567 Score = 244 bits (123), Expect = 2e-61 Identities = 219/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AY514570.1| Zea luxurians voucher PI311282 RFLP marker csu1132 Length = 564 Score = 244 bits (123), Expect = 2e-61 Identities = 219/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 372 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 313 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| ||||||||||||||||||||| ||||||||||| || || ||||| |||||||| Sbjct: 312 ctcagcttgaagacgctctcgatgactgagagctcggtggctgtcgtgtccgagccacaa 253 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 252 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 193 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| || |||||||| ||||| ||||| ||||| ||||| ||||| ||||||| ||| Sbjct: 192 gttcctgcaacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacagat 133 Query: 420 gtgtgaggatg 430 || |||||||| Sbjct: 132 gtatgaggatg 122
>gb|AY514569.1| Zea luxurians voucher PI306615 RFLP marker csu1132 Length = 565 Score = 244 bits (123), Expect = 2e-61 Identities = 219/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AY514568.1| Zea luxurians voucher G-36 RFLP marker csu1132 Length = 565 Score = 244 bits (123), Expect = 2e-61 Identities = 219/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AY514567.1| Zea luxurians voucher G-42 RFLP marker csu1132 Length = 558 Score = 244 bits (123), Expect = 2e-61 Identities = 219/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| ||||| ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctcgacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| || |||||||| ||||| ||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcaacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatgcggatg 124
>gb|AY514566.1| Zea luxurians voucher 2440 RFLP marker csu1132 Length = 565 Score = 244 bits (123), Expect = 2e-61 Identities = 219/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AY514565.1| Zea luxurians voucher 30919 RFLP marker csu1132 Length = 565 Score = 244 bits (123), Expect = 2e-61 Identities = 219/251 (87%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggccgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AF377488.1| Zea mays subsp. mays isolate Tx601 RFLP marker sequence Length = 550 Score = 236 bits (119), Expect = 6e-59 Identities = 218/251 (86%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 372 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 313 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| ||||||||| || |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 312 ctcagcttgaagacactttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 253 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 252 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 193 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| ||||||| ||| Sbjct: 192 gttcctgcgacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacagat 133 Query: 420 gtgtgaggatg 430 || |||||||| Sbjct: 132 gtatgaggatg 122
>gb|AF377474.1| Zea mays subsp. mays isolate CHH160 RFLP marker sequence Length = 565 Score = 236 bits (119), Expect = 6e-59 Identities = 218/251 (86%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| ||||| ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctcgacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| |||||||| |||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaataacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| || |||||||| ||||| ||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcaacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AF377472.1| Zea mays subsp. mays isolate VEN453 RFLP marker sequence Length = 565 Score = 236 bits (119), Expect = 6e-59 Identities = 218/251 (86%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| ||||| ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctcgacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| |||||||| |||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaataacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| || |||||||| ||||| ||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcaacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AY514588.1| Zea mays subsp. parviglumis voucher 967 RFLP marker csu1132 Length = 565 Score = 236 bits (119), Expect = 6e-59 Identities = 218/251 (86%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 || ||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaagcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AY514584.1| Zea mays subsp. parviglumis voucher PI566686 RFLP marker csu1132 Length = 567 Score = 236 bits (119), Expect = 6e-59 Identities = 218/251 (86%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 373 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 314 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| ||||||||||||||||||||| ||||||||||| || || ||||| |||||||| Sbjct: 313 ctcagcttgaagacgctctcgatgactgagagctcggtggccgtcgtgtcagagccacaa 254 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 253 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 194 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| || |||||||| ||||| ||||| ||||| ||||| || || ||||||| |||| Sbjct: 193 gttcctgcaacaagaggaacttgcaggagcgtggagagctcgtctaggtcttcaacggat 134 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 133 gtatggggatg 123
>gb|AY514582.1| Zea mays subsp. mexicana voucher 2438 RFLP marker csu1132 Length = 562 Score = 236 bits (119), Expect = 6e-59 Identities = 218/251 (86%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||| | |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggccgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AY514580.1| Zea mays subsp. mexicana voucher s.n.1 RFLP marker csu1132 Length = 557 Score = 236 bits (119), Expect = 6e-59 Identities = 218/251 (86%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 374 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| ||||||||| || |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacactttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AY514575.1| Zea mays subsp. mexicana voucher PI566673 RFLP marker csu1132 Length = 549 Score = 236 bits (119), Expect = 6e-59 Identities = 218/251 (86%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| |||||| Sbjct: 357 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttct 298 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| ||||||||||||||||||||| ||||||||||| || || ||||| |||||||| Sbjct: 297 ctcagcttgaagacgctctcgatgactgagagctcggtggccgtcgtgtcagagccacaa 238 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 237 aaggcagtccagtcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 178 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| || |||||||| ||||| ||||| ||||| ||||| || || ||||||| |||| Sbjct: 177 gttcctgcaacaagaggaacttgcaggagcgtggagagctcgtctaggtcttcaacggat 118 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 117 gtatggggatg 107
>gb|AF377493.1| Tripsacum dactyloides RFLP marker sequence Length = 575 Score = 228 bits (115), Expect = 1e-56 Identities = 217/251 (86%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 383 acgtaactgtctatcagagacttcctcatgtcctccacaatcgcagtgggctgcccttcc 324 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| ||||||||||||||||||||| ||||||||||| || || ||||| |||||||| Sbjct: 323 ctcagcttgaagacgctctcgatgactgagagctcggtggccgtcgtgtccgagccacaa 264 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 |||||||||||||||||||| |||||||| |||||||| |||||||| || | |||||| Sbjct: 263 aaggcagtccagtcgttcactgtcatgcctgcagcaataacctcgcttcctctgttcaca 204 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| || |||||||| ||||| ||||| ||||| ||||| || || ||||||| |||| Sbjct: 203 gttcctgcaacaagaggaacttgcaggagcgtggagagctcgtcgaggtcttcaacggat 144 Query: 420 gtgtgaggatg 430 || |||||||| Sbjct: 143 gtatgaggatg 133
>gb|AY514579.1| Zea mays subsp. mexicana voucher 28620 RFLP marker csu1132 Length = 557 Score = 220 bits (111), Expect = 3e-54 Identities = 216/251 (86%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| || || |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 374 acgtaactgtctattagagacttcctcatgtcctccacaatcgcagtgggctgcccttcc 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 ||||||||||| |||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccaatcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AY514578.1| Zea mays subsp. mexicana voucher PI566685 RFLP marker csu1132 Length = 557 Score = 220 bits (111), Expect = 3e-54 Identities = 216/251 (86%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| || || |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 374 acgtaactgtctattagagacttcctcatgtcctccacaatcgcagtgggctgcccttcc 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 ||||||||||| |||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccaatcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AY514577.1| Zea mays subsp. mexicana voucher PI566682 RFLP marker csu1132 Length = 557 Score = 220 bits (111), Expect = 3e-54 Identities = 216/251 (86%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| || || |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 374 acgtaactgtctattagagacttcctcatgtcctccacaatcgcagtgggctgcccttcc 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 ||||||||||| |||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccaatcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>gb|AY514573.1| Zea luxurians voucher 30900 RFLP marker csu1132 Length = 557 Score = 220 bits (111), Expect = 3e-54 Identities = 216/251 (86%) Strand = Plus / Minus Query: 180 acgtagctgtcaatcagcgacttcctcatgtcatcgacgatcgccgtgggctggccttct 239 ||||| ||||| || || |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 374 acgtaactgtctattagagacttcctcatgtcctccacaatcgcagtgggctgcccttcc 315 Query: 240 ctcaacttgaagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacag 299 |||| |||||||||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 314 ctcagcttgaagacgctttcgatgactgagagctcggtggctgtcgtgtccgagccacaa 255 Query: 300 aaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacggttcacg 359 ||||||||||| |||||||| |||||||| ||||||||||||||||| || | |||||| Sbjct: 254 aaggcagtccaatcgttcactgtcatgcctgcagcaatgacctcgcttcctctgttcaca 195 Query: 360 gttcccgcgacaagagggacttggaggagtgtggacagctcatcaagatcttcaatggat 419 ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| ||||||| |||| Sbjct: 194 gttcctgcgacaagaggaacttgcaggagcgtggagagctcgtcaaggtcttcaacggat 135 Query: 420 gtgtgaggatg 430 || || ||||| Sbjct: 134 gtatggggatg 124
>ref|NM_115420.2| Arabidopsis thaliana EMB1624; translation initiation factor AT3G55620 (EMB1624) mRNA, complete cds Length = 1087 Score = 121 bits (61), Expect = 2e-24 Identities = 244/305 (80%) Strand = Plus / Minus Query: 198 gacttcctcatgtcatcgacgatcgccgtgggctggccttctctcaacttgaagacgctc 257 ||||||||||| ||||||||||| | |||| ||| |||| || | |||||||| ||| Sbjct: 871 gacttcctcatctcatcgacgatagagctgggttgggcttcccttagcttgaagatgctg 812 Query: 258 tcgatgacggagagctcggtagcggttgtgtctgagccacagaaggcagtccagtcgttc 317 || ||||| |||||||| || || ||||||||||| || ||||| | ||||| || || Sbjct: 811 tctatgacagagagctcagtcgcagttgtgtctgaaccgcagaaagaggtccaatcatta 752 Query: 318 accgtcatgcccgcagcaatgacctcgctaccacggttcacggttcccgcgacaagaggg 377 || ||||| |||||||| || || || |||||||||||||||||||| || || |||||| Sbjct: 751 acggtcatacccgcagcgataacttcactaccacggttcacggttcctgcaacgagaggg 692 Query: 378 acttggaggagtgtggacagctcatcaagatcttcaatggatgtgtgaggatggaccagt 437 ||||| || ||||| || || || || | ||||| | || |||||||||||||||| | Sbjct: 691 acttgaagaagtgttgagagttcttccaagtcttccactgaggtgtgaggatggaccatt 632 Query: 438 ccacccctgttagagaatgcacagtagctcccaacaaggatatttcctgcaattgtctga 497 ||||| |||| || | |||||||| || || || || || || ||||||||||||||| Sbjct: 631 ccacctttgttggatagggcacagtaactgcccacgagaatgttgcctgcaattgtctga 572 Query: 498 cggaa 502 ||||| Sbjct: 571 cggaa 567
>gb|BT009656.1| Arabidopsis thaliana At3g55620 mRNA, complete cds Length = 738 Score = 121 bits (61), Expect = 2e-24 Identities = 244/305 (80%) Strand = Plus / Minus Query: 198 gacttcctcatgtcatcgacgatcgccgtgggctggccttctctcaacttgaagacgctc 257 ||||||||||| ||||||||||| | |||| ||| |||| || | |||||||| ||| Sbjct: 716 gacttcctcatctcatcgacgatagagctgggttgggcttcccttagcttgaagatgctg 657 Query: 258 tcgatgacggagagctcggtagcggttgtgtctgagccacagaaggcagtccagtcgttc 317 || ||||| |||||||| || || ||||||||||| || ||||| | ||||| || || Sbjct: 656 tctatgacagagagctcagtcgcagttgtgtctgaaccgcagaaagaggtccaatcatta 597 Query: 318 accgtcatgcccgcagcaatgacctcgctaccacggttcacggttcccgcgacaagaggg 377 || ||||| |||||||| || || || |||||||||||||||||||| || || |||||| Sbjct: 596 acggtcatacccgcagcgataacttcactaccacggttcacggttcctgcaacgagaggg 537 Query: 378 acttggaggagtgtggacagctcatcaagatcttcaatggatgtgtgaggatggaccagt 437 ||||| || ||||| || || || || | ||||| | || |||||||||||||||| | Sbjct: 536 acttgaagaagtgttgagagttcttccaagtcttccactgaggtgtgaggatggaccatt 477 Query: 438 ccacccctgttagagaatgcacagtagctcccaacaaggatatttcctgcaattgtctga 497 ||||| |||| || | |||||||| || || || || || || ||||||||||||||| Sbjct: 476 ccacctttgttggatagggcacagtaactgcccacgagaatgttgcctgcaattgtctga 417 Query: 498 cggaa 502 ||||| Sbjct: 416 cggaa 412
>gb|AY128351.1| Arabidopsis thaliana eukaryotic translation initiation factor 6 (EIF-6)-like protein (At3g55620) mRNA, complete cds Length = 1010 Score = 121 bits (61), Expect = 2e-24 Identities = 244/305 (80%) Strand = Plus / Minus Query: 198 gacttcctcatgtcatcgacgatcgccgtgggctggccttctctcaacttgaagacgctc 257 ||||||||||| ||||||||||| | |||| ||| |||| || | |||||||| ||| Sbjct: 840 gacttcctcatctcatcgacgatagagctgggttgggcttcccttagcttgaagatgctg 781 Query: 258 tcgatgacggagagctcggtagcggttgtgtctgagccacagaaggcagtccagtcgttc 317 || ||||| |||||||| || || ||||||||||| || ||||| | ||||| || || Sbjct: 780 tctatgacagagagctcagtcgcagttgtgtctgaaccgcagaaagaggtccaatcatta 721 Query: 318 accgtcatgcccgcagcaatgacctcgctaccacggttcacggttcccgcgacaagaggg 377 || ||||| |||||||| || || || |||||||||||||||||||| || || |||||| Sbjct: 720 acggtcatacccgcagcgataacttcactaccacggttcacggttcctgcaacgagaggg 661 Query: 378 acttggaggagtgtggacagctcatcaagatcttcaatggatgtgtgaggatggaccagt 437 ||||| || ||||| || || || || | ||||| | || |||||||||||||||| | Sbjct: 660 acttgaagaagtgttgagagttcttccaagtcttccactgaggtgtgaggatggaccatt 601 Query: 438 ccacccctgttagagaatgcacagtagctcccaacaaggatatttcctgcaattgtctga 497 ||||| |||| || | |||||||| || || || || || || ||||||||||||||| Sbjct: 600 ccacctttgttggatagggcacagtaactgcccacgagaatgttgcctgcaattgtctga 541 Query: 498 cggaa 502 ||||| Sbjct: 540 cggaa 536
>emb|AL161667.1|ATF1I16 Arabidopsis thaliana DNA chromosome 3, BAC clone F1I16 Length = 103785 Score = 99.6 bits (50), Expect = 9e-18 Identities = 158/194 (81%) Strand = Plus / Minus Query: 198 gacttcctcatgtcatcgacgatcgccgtgggctggccttctctcaacttgaagacgctc 257 ||||||||||| ||||||||||| | |||| ||| |||| || | |||||||| ||| Sbjct: 24378 gacttcctcatctcatcgacgatagagctgggttgggcttcccttagcttgaagatgctg 24319 Query: 258 tcgatgacggagagctcggtagcggttgtgtctgagccacagaaggcagtccagtcgttc 317 || ||||| |||||||| || || ||||||||||| || ||||| | ||||| || || Sbjct: 24318 tctatgacagagagctcagtcgcagttgtgtctgaaccgcagaaagaggtccaatcatta 24259 Query: 318 accgtcatgcccgcagcaatgacctcgctaccacggttcacggttcccgcgacaagaggg 377 || ||||| |||||||| || || || |||||||||||||||||||| || || |||||| Sbjct: 24258 acggtcatacccgcagcgataacttcactaccacggttcacggttcctgcaacgagaggg 24199 Query: 378 acttggaggagtgt 391 ||||| || ||||| Sbjct: 24198 acttgaagaagtgt 24185 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 cctgcaattgtctgacggaa 502 |||||||||||||||||||| Sbjct: 24003 cctgcaattgtctgacggaa 23984
>gb|BC109922.1| Bos taurus integrin beta 4 binding protein, mRNA (cDNA clone MGC:133866 IMAGE:8040943), complete cds Length = 1119 Score = 77.8 bits (39), Expect = 3e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| ||||||||||||| ||| || |||||||| |||||||| || || Sbjct: 648 gccacagaaggcacaccagtcgttcaccaccatcccagcagcaatcacctcgctgcctcg 589 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| ||||| || ||||| | ||||||||||| Sbjct: 588 gttcacagtgcccgccacaagggggacctgaaggagagaagacagctcatc 538
>ref|NM_174830.1| Bos taurus integrin beta 4 binding protein (ITGB4BP), mRNA Length = 1042 Score = 77.8 bits (39), Expect = 3e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||||||||||| ||| || |||||||| |||||||| || || Sbjct: 643 gccacagaaggcacaccagtcgttcaccgccatcccagcagcaatcacctcgctgcctcg 584 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| ||||| || || || | ||||||||||| Sbjct: 583 gttcacagtgcccgccacaagggggacctgaagaagagaagacagctcatc 533
>gb|AF141872.1|AF141872 Bos taurus imc-415 homolog mRNA, complete cds Length = 1042 Score = 77.8 bits (39), Expect = 3e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||||||||||| ||| || |||||||| |||||||| || || Sbjct: 643 gccacagaaggcacaccagtcgttcaccgccatcccagcagcaatcacctcgctgcctcg 584 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| ||||| || || || | ||||||||||| Sbjct: 583 gttcacagtgcccgccacaagggggacctgaagaagagaagacagctcatc 533
>ref|XM_514603.1| PREDICTED: Pan troglodytes similar to Eukaryotic translation initiation factor 6 (eIF-6) (B4 integrin interactor) (CAB) (p27(BBP)) (B(2)GCN homolog) (OK/SW-cl.27) (LOC458200), mRNA Length = 853 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 637 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 578 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| |||||||| || || | |||||||||||| Sbjct: 577 gttcacagtccccgccacaagggggacttgaagaagagaggacagctcatc 527
>gb|BT019757.1| Synthetic construct Homo sapiens integrin beta 4 binding protein mRNA, partial cds Length = 738 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 621 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 562 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| |||||||| || || | |||||||||||| Sbjct: 561 gttcacagtccccgccacaagggggacttgaagaagagaggacagctcatc 511
>gb|BC001119.2| Homo sapiens integrin beta 4 binding protein, transcript variant 1, mRNA (cDNA clone MGC:1959 IMAGE:2989973), complete cds Length = 1109 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 690 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 631 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| |||||||| || || | |||||||||||| Sbjct: 630 gttcacagtccccgccacaagggggacttgaagaagagaggacagctcatc 580
>gb|BC019305.1| Homo sapiens integrin beta 4 binding protein, transcript variant 1, mRNA (cDNA clone MGC:4200 IMAGE:2823211), complete cds Length = 1060 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 650 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 591 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| |||||||| || || | |||||||||||| Sbjct: 590 gttcacagtccccgccacaagggggacttgaagaagagaggacagctcatc 540
>ref|NM_181466.1| Homo sapiens integrin beta 4 binding protein (ITGB4BP), transcript variant 4, mRNA Length = 1057 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 635 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 576 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| |||||||| || || | |||||||||||| Sbjct: 575 gttcacagtccccgccacaagggggacttgaagaagagaggacagctcatc 525
>ref|NM_181467.1| Homo sapiens integrin beta 4 binding protein (ITGB4BP), transcript variant 5, mRNA Length = 938 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 516 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 457 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| |||||||| || || | |||||||||||| Sbjct: 456 gttcacagtccccgccacaagggggacttgaagaagagaggacagctcatc 406
>ref|NM_181469.1| Homo sapiens integrin beta 4 binding protein (ITGB4BP), transcript variant 3, mRNA Length = 1083 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 661 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 602 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| |||||||| || || | |||||||||||| Sbjct: 601 gttcacagtccccgccacaagggggacttgaagaagagaggacagctcatc 551
>ref|NM_181468.1| Homo sapiens integrin beta 4 binding protein (ITGB4BP), transcript variant 2, mRNA Length = 1259 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 837 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 778 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| |||||||| || || | |||||||||||| Sbjct: 777 gttcacagtccccgccacaagggggacttgaagaagagaggacagctcatc 727
>ref|NM_002212.2| Homo sapiens integrin beta 4 binding protein (ITGB4BP), transcript variant 1, mRNA Length = 1114 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 692 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 633 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| |||||||| || || | |||||||||||| Sbjct: 632 gttcacagtccccgccacaagggggacttgaagaagagaggacagctcatc 582
>gb|BC014403.1| Homo sapiens cDNA clone IMAGE:3507239, partial cds Length = 3579 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Plus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 2173 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 2232 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| |||||||| || || | |||||||||||| Sbjct: 2233 gttcacagtccccgccacaagggggacttgaagaagagaggacagctcatc 2283
>emb|Y11435.1|HSB4INTIN H.sapiens mRNA for b4 integrin interactor Length = 1108 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 659 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 600 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| |||||||| || || | |||||||||||| Sbjct: 599 gttcacagtccccgccacaagggggacttgaagaagagaggacagctcatc 549
>emb|CR619745.1| full-length cDNA clone CS0DH006YN03 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1045 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 655 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 596 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| |||||||| || || | |||||||||||| Sbjct: 595 gttcacagtccccgccacaagggggacttgaagaagagaggacagctcatc 545
>emb|CR608963.1| full-length cDNA clone CS0DI034YJ11 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1052 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 659 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 600 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| |||||||| || || | |||||||||||| Sbjct: 599 gttcacagtccccgccacaagggggacttgaagaagagaggacagctcatc 549
>emb|CR607452.1| full-length cDNA clone CS0DI014YC06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1043 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 666 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 607 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| |||||||| || || | |||||||||||| Sbjct: 606 gttcacagtccccgccacaagggggacttgaagaagagaggacagctcatc 556
>emb|CR602132.1| full-length cDNA clone CS0DB008YD21 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1024 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 676 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 617 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| |||||||| || || | |||||||||||| Sbjct: 616 gttcacagtccccgccacaagggggacttgaagaagagaggacagctcatc 566
>emb|CR599682.1| full-length cDNA clone CS0DF025YH05 of Fetal brain of Homo sapiens (human) Length = 1223 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 845 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 786 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| |||||||| || || | |||||||||||| Sbjct: 785 gttcacagtccccgccacaagggggacttgaagaagagaggacagctcatc 735
>emb|CR598892.1| full-length cDNA clone CS0DL005YE18 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1057 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 652 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 593 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| |||||||| || || | |||||||||||| Sbjct: 592 gttcacagtccccgccacaagggggacttgaagaagagaggacagctcatc 542
>emb|CR592531.1| full-length cDNA clone CS0DL011YB12 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1023 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 660 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 601 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| |||||||| || || | |||||||||||| Sbjct: 600 gttcacagtccccgccacaagggggacttgaagaagagaggacagctcatc 550
>emb|CR456764.1| Homo sapiens full open reading frame cDNA clone RZPDo834D044D for gene ITGB4BP, integrin beta 4 binding protein; complete cds, incl. stopcodon Length = 738 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 621 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 562 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| |||||||| || || | |||||||||||| Sbjct: 561 gttcacagtccccgccacaagggggacttgaagaagagaggacagctcatc 511
>gb|BC095465.1| Homo sapiens cDNA clone IMAGE:30559307 Length = 927 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 490 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 431 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| |||||||| || || | |||||||||||| Sbjct: 430 gttcacagtccccgccacaagggggacttgaagaagagaggacagctcatc 380
>gb|BC039466.1| Homo sapiens, Similar to integrin beta 4 binding protein, clone IMAGE:3902946, mRNA Length = 1401 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 953 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 894 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| |||||||| || || | |||||||||||| Sbjct: 893 gttcacagtccccgccacaagggggacttgaagaagagaggacagctcatc 843
>gb|AF047433.1| Homo sapiens b(2)gcn homolog mRNA, complete cds Length = 1112 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 691 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 632 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| |||||||| || || | |||||||||||| Sbjct: 631 gttcacagtccccgccacaagggggacttgaagaagagaggacagctcatc 581
>gb|AY890841.1| Synthetic construct Homo sapiens clone FLH020433.01L integrin beta 4 binding protein (ITGB4BP) mRNA, partial cds Length = 738 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 621 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 562 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| |||||||| || || | |||||||||||| Sbjct: 561 gttcacagtccccgccacaagggggacttgaagaagagaggacagctcatc 511
>gb|BC011845.2| Homo sapiens integrin beta 4 binding protein, transcript variant 1, mRNA (cDNA clone MGC:20289 IMAGE:4120463), complete cds Length = 1087 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 668 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 609 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| |||||||| || || | |||||||||||| Sbjct: 608 gttcacagtccccgccacaagggggacttgaagaagagaggacagctcatc 558
>gb|AF022229.1|AF022229 Homo sapiens translation initiation factor 6 (eIF6) mRNA, complete cds Length = 1096 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 706 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 647 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| |||||||| || || | |||||||||||| Sbjct: 646 gttcacagtccccgccacaagggggacttgaagaagagaggacagctcatc 596
>dbj|AB062289.1| Homo sapiens OK/SW-cl.27 mRNA for integrin beta 4 binding protein, complete cds Length = 1068 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 650 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 591 Query: 353 gttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatc 403 |||||| || ||||| ||||| |||||||| || || | |||||||||||| Sbjct: 590 gttcacagtccccgccacaagggggacttgaagaagagaggacagctcatc 540
>emb|AJ009737.1|BVU9737 Beta vulgaris mRNA for eukaryotic translation initiation factor 6, partial Length = 678 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 396 agctcatcaagatcttcaatggatgtgtgaggatggaccagtccacccctgttagagaat 455 |||||||| | ||||||||| || |||||||||||||||| ||||| |||| | || Sbjct: 617 agctcatccaaatcttcaattgaggtgtgaggatggaccaaaccacctttgttggtgatc 558 Query: 456 gcacagtagctcccaacaaggatatttcctgcaattgtctg 496 ||||||||||| || ||||| || ||||| ||||||||||| Sbjct: 557 gcacagtagcttcccacaagaatgtttccagcaattgtctg 517
>gb|BT014333.1| Lycopersicon esculentum clone 133606F, mRNA sequence Length = 1071 Score = 50.1 bits (25), Expect = 0.007 Identities = 118/149 (79%) Strand = Plus / Minus Query: 345 ctaccacggttcacggttcccgcgacaagagggacttggaggagtgtggacagctcatca 404 ||||| |||||||| ||||| || || ||||| || || || || || || |||||||| Sbjct: 687 ctaccgcggttcacagttcctgcaaccagaggaacctgaagaagagttgaaagctcatcc 628 Query: 405 agatcttcaatggatgtgtgaggatggaccagtccacccctgttagagaatgcacagtag 464 | ||||||||||| || |||||||| |||| || || |||| |||| ||||| ||| Sbjct: 627 aagtcttcaatggacgtatgaggatgtaccaaacctcctgtgtttgagatagcacaatag 568 Query: 465 ctcccaacaaggatatttcctgcaattgt 493 || |||||||| ||||| ||||| ||||| Sbjct: 567 ctgccaacaagaatattccctgctattgt 539
>gb|AY398366.1| Danio rerio clone RK150A4A01 integrin beta 4 binding protein (ITGB4BP) mRNA, complete cds Length = 1058 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Minus Query: 247 tgaagacgctctcgatgacggagagctc 274 ||||||||||||||||||| |||||||| Sbjct: 760 tgaagacgctctcgatgactgagagctc 733
>ref|NM_200944.1| Danio rerio integrin beta 4 binding protein (itgb4bp4), mRNA Length = 1156 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Minus Query: 247 tgaagacgctctcgatgacggagagctc 274 ||||||||||||||||||| |||||||| Sbjct: 749 tgaagacgctctcgatgactgagagctc 722
>gb|BC049488.1| Danio rerio integrin beta 4 binding protein, mRNA (cDNA clone MGC:56562 IMAGE:5914749), complete cds Length = 1156 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Minus Query: 247 tgaagacgctctcgatgacggagagctc 274 ||||||||||||||||||| |||||||| Sbjct: 749 tgaagacgctctcgatgactgagagctc 722
>gb|BC071374.1| Danio rerio integrin beta 4 binding protein, mRNA (cDNA clone MGC:86693 IMAGE:6895784), complete cds Length = 1157 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Minus Query: 247 tgaagacgctctcgatgacggagagctc 274 ||||||||||||||||||| |||||||| Sbjct: 761 tgaagacgctctcgatgactgagagctc 734
>ref|XM_859372.1| PREDICTED: Canis familiaris similar to Eukaryotic translation initiation factor 6 (eIF-6) (B4 integrin interactor) (CAB) (p27(BBP)) (B(2)GCN homolog), transcript variant 3 (LOC477210), mRNA Length = 1246 Score = 48.1 bits (24), Expect = 0.028 Identities = 69/84 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || || ||||| |||||||| || || Sbjct: 860 gccacagaaggcacaccagtcattcaccaccatcccagcggcaatcacctcgctgcctcg 801 Query: 353 gttcacggttcccgcgacaagagg 376 |||||| || || || |||||||| Sbjct: 800 gttcacagtgcctgccacaagagg 777
>ref|XM_859354.1| PREDICTED: Canis familiaris similar to Eukaryotic translation initiation factor 6 (eIF-6) (B4 integrin interactor) (CAB) (p27(BBP)) (B(2)GCN homolog), transcript variant 2 (LOC477210), mRNA Length = 1097 Score = 48.1 bits (24), Expect = 0.028 Identities = 69/84 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || || ||||| |||||||| || || Sbjct: 714 gccacagaaggcacaccagtcattcaccaccatcccagcggcaatcacctcgctgcctcg 655 Query: 353 gttcacggttcccgcgacaagagg 376 |||||| || || || |||||||| Sbjct: 654 gttcacagtgcctgccacaagagg 631
>ref|XM_534401.2| PREDICTED: Canis familiaris similar to Eukaryotic translation initiation factor 6 (eIF-6) (B4 integrin interactor) (CAB) (p27(BBP)) (B(2)GCN homolog), transcript variant 1 (LOC477210), mRNA Length = 1276 Score = 48.1 bits (24), Expect = 0.028 Identities = 69/84 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || || ||||| |||||||| || || Sbjct: 890 gccacagaaggcacaccagtcattcaccaccatcccagcggcaatcacctcgctgcctcg 831 Query: 353 gttcacggttcccgcgacaagagg 376 |||||| || || || |||||||| Sbjct: 830 gttcacagtgcctgccacaagagg 807
>emb|AL929108.5| Zebrafish DNA sequence from clone CH211-239J9 in linkage group 6 Contains the 3' part of a novel gene similar to human and mouse SPAG1 (sperm associated antigen 1), a novel gene similar to human and mouse COX6C (cytochrome c oxidase, subunit VIc), a novel gene, a novel gene similar to mouse and human MBC2 (membrane bound C2 domain containing protein), a novel gene similar to vertebrate ITGB4BP (integrin beta 4 binding protein), the 3' part of novel gene similar to vertebrate MMP24 (membrane-inserted matrix metalloproteinase 24) and two predicted CpG islands, complete sequence Length = 161277 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 247 tgaagacgctctcgatgacggagagctc 274 ||||||||||||||||||| |||||||| Sbjct: 112938 tgaagacgctctcgatgactgagagctc 112965
>emb|AL121753.30|HSDJ614O4 Human DNA sequence from clone RP4-614O4 on chromosome 20q11.1-12 Contains the C20orf127 locus for a metallothionein protein pseudogene, the MMP24 gene for matrix metalloproteinase 24 (membrane-inserted), a novel gene, the ITGB4BP gene for integrin beta 4 binding protein, the C20orf120 gene for chromosome 20 open reading frame 120, the C20orf128 gene for chromosome 20 open reading frame 128, the 3' end of the C20orf44 gene for chromosome 20 open reading frame 44 and three CpG islands, complete sequence Length = 150481 Score = 46.1 bits (23), Expect = 0.11 Identities = 62/75 (82%) Strand = Plus / Plus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 89146 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 89205 Query: 353 gttcacggttcccgc 367 |||||| || ||||| Sbjct: 89206 gttcacagtccccgc 89220
>gb|AF289541.1|AF289540S2 Homo sapiens p27BBP protein (ITGB4BP) gene, exons 4, 5, 6, 7, and complete cds Length = 1908 Score = 46.1 bits (23), Expect = 0.11 Identities = 62/75 (82%) Strand = Plus / Minus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 1157 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 1098 Query: 353 gttcacggttcccgc 367 |||||| || ||||| Sbjct: 1097 gttcacagtccccgc 1083
>gb|AC163761.3| Pan troglodytes BAC clone CH251-214O19 from chromosome unknown, complete sequence Length = 193316 Score = 46.1 bits (23), Expect = 0.11 Identities = 62/75 (82%) Strand = Plus / Plus Query: 293 gccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgctaccacg 352 ||||||||||||| |||||| |||||| ||| || |||||||| ||||| || || || Sbjct: 65248 gccacagaaggcacaccagtcattcaccaccatcccagcagcaatcacctcactgcctcg 65307 Query: 353 gttcacggttcccgc 367 |||||| || ||||| Sbjct: 65308 gttcacagtccccgc 65322
>ref|NM_145105.2| Drosophila melanogaster eIF6 CG17611-RA (eIF6), mRNA Length = 1054 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 245 cttgaagacgctctcgatgacggaga 270 |||||||||||||||||| ||||||| Sbjct: 896 cttgaagacgctctcgatcacggaga 871
>gb|AY094688.1| Drosophila melanogaster GH08760 full insert cDNA Length = 997 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 245 cttgaagacgctctcgatgacggaga 270 |||||||||||||||||| ||||||| Sbjct: 821 cttgaagacgctctcgatcacggaga 796
>gb|AC009182.4|AC009182 Drosophila melanogaster, chromosome 2R, region 60A2-60A3, BAC clone BACR05F24, complete sequence Length = 147086 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 245 cttgaagacgctctcgatgacggaga 270 |||||||||||||||||| ||||||| Sbjct: 74108 cttgaagacgctctcgatcacggaga 74133
>gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69 of 73 of the complete sequence Length = 598988 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 245 cttgaagacgctctcgatgacggaga 270 |||||||||||||||||| ||||||| Sbjct: 370593 cttgaagacgctctcgatcacggaga 370618
>gb|AC005267.1|AC005267 Drosophila melanogaster DNA sequence (P1s DS03050 (D194) and DS06185 (D246)), complete sequence Length = 98645 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 245 cttgaagacgctctcgatgacggaga 270 |||||||||||||||||| ||||||| Sbjct: 2792 cttgaagacgctctcgatcacggaga 2817
>emb|X97641.1|DMB2GCN Drosophila melanogaster b(2)gcn gene Length = 3630 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 245 cttgaagacgctctcgatgacggaga 270 |||||||||||||||||| ||||||| Sbjct: 1285 cttgaagacgctctcgatcacggaga 1260
>ref|NM_129541.2| Arabidopsis thaliana translation initiation factor AT2G39820 mRNA, complete cds Length = 884 Score = 42.1 bits (21), Expect = 1.7 Identities = 63/77 (81%) Strand = Plus / Minus Query: 288 tctgagccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgcta 347 ||||| |||||||| || ||||| |||||||| |||| ||||| | || || | ||| Sbjct: 675 tctgacccacagaaagcggtccaatcgttcacagtcaaacccgcggatataacttggctg 616 Query: 348 ccacggttcacggttcc 364 ||||||||||||||||| Sbjct: 615 ccacggttcacggttcc 599
>ref|NM_001030848.1| Gallus gallus integrin beta 4 binding protein (ITGB4BP), mRNA Length = 2461 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 245 cttgaagacgctctcgatgacggagagctcggt 277 |||||||| |||||| ||||| ||||||||||| Sbjct: 761 cttgaagatgctctcaatgacagagagctcggt 729
>ref|XM_757497.1| Ustilago maydis 521 hypothetical protein (UM06443.1) partial mRNA Length = 741 Score = 42.1 bits (21), Expect = 1.7 Identities = 45/53 (84%) Strand = Plus / Minus Query: 249 aagacgctctcgatgacggagagctcggtagcggttgtgtctgagccacagaa 301 |||||||||||||||||| || ||||||||||| | ||| | ||||||||| Sbjct: 665 aagacgctctcgatgacgctgatttcggtagcggtggcgtcggtgccacagaa 613
>emb|AJ719842.1| Gallus gallus mRNA for hypothetical protein, clone 7b21 Length = 2461 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 245 cttgaagacgctctcgatgacggagagctcggt 277 |||||||| |||||| ||||| ||||||||||| Sbjct: 761 cttgaagatgctctcaatgacagagagctcggt 729
>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete sequence Length = 92624 Score = 42.1 bits (21), Expect = 1.7 Identities = 63/77 (81%) Strand = Plus / Minus Query: 288 tctgagccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgcta 347 ||||| |||||||| || ||||| |||||||| |||| ||||| | || || | ||| Sbjct: 62013 tctgacccacagaaagcggtccaatcgttcacagtcaaacccgcggatataacttggctg 61954 Query: 348 ccacggttcacggttcc 364 ||||||||||||||||| Sbjct: 61953 ccacggttcacggttcc 61937
>emb|BX821100.1|CNS0A8CN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL15ZE06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 884 Score = 42.1 bits (21), Expect = 1.7 Identities = 63/77 (81%) Strand = Plus / Minus Query: 288 tctgagccacagaaggcagtccagtcgttcaccgtcatgcccgcagcaatgacctcgcta 347 ||||| |||||||| || ||||| |||||||| |||| ||||| | || || | ||| Sbjct: 675 tctgacccacagaaagcggtccaatcgttcacagtcaaacccgcggatataacttggctg 616 Query: 348 ccacggttcacggttcc 364 ||||||||||||||||| Sbjct: 615 ccacggttcacggttcc 599
>gb|AY726733.1| Phodopus sungorus melanopsin mRNA, complete cds Length = 1410 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 193 tcagcgacttcctcatgtcat 213 ||||||||||||||||||||| Sbjct: 338 tcagcgacttcctcatgtcat 358
>emb|AL627072.17| Mouse DNA sequence from clone RP23-432B19 on chromosome 4, complete sequence Length = 208805 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 444 ctgttagagaatgcacagtag 464 ||||||||||||||||||||| Sbjct: 51892 ctgttagagaatgcacagtag 51912
>gb|AC154276.2| Mus musculus BAC clone RP24-260F19 from chromosome 14, complete sequence Length = 186529 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 tcagcgacttcctcatgtca 212 |||||||||||||||||||| Sbjct: 163608 tcagcgacttcctcatgtca 163627
>ref|XM_421556.1| PREDICTED: Gallus gallus similar to ATPase family, AAA domain containing 1 (LOC423676), mRNA Length = 2045 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 ctctcgatgacggagagctc 274 |||||||||||||||||||| Sbjct: 301 ctctcgatgacggagagctc 282
>ref|NM_013887.1| Mus musculus opsin 4 (melanopsin) (Opn4), mRNA Length = 2137 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 tcagcgacttcctcatgtca 212 |||||||||||||||||||| Sbjct: 522 tcagcgacttcctcatgtca 541
>gb|AC114543.10| Mus musculus, clone RP24-107C11, complete sequence Length = 191639 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 tcagcgacttcctcatgtca 212 |||||||||||||||||||| Sbjct: 160211 tcagcgacttcctcatgtca 160192
>ref|XM_963416.1| PREDICTED: Tribolium castaneum similar to CG18214-PA, isoform A (LOC656919), mRNA Length = 4836 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 agagggacttggaggagtgt 391 |||||||||||||||||||| Sbjct: 4688 agagggacttggaggagtgt 4707
>emb|AL513025.13| Mouse DNA sequence from clone RP23-235O1 on chromosome 13 Contains the 5' end of a novel gene, the E2f3 gene for E2F transcription factor 3, a novel gene and two CpG islands, complete sequence Length = 197940 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 gctttaccaggacaaagcac 50 |||||||||||||||||||| Sbjct: 182926 gctttaccaggacaaagcac 182945
>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 Length = 1913118 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 gtaggctttaccaggacaaa 46 |||||||||||||||||||| Sbjct: 1878191 gtaggctttaccaggacaaa 1878172
>gb|AC019016.7| Homo sapiens chromosome 15, clone RP11-201P10, complete sequence Length = 53718 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 tatttcctgcaattgtctga 497 |||||||||||||||||||| Sbjct: 38926 tatttcctgcaattgtctga 38907
>emb|BX932475.2| Gallus gallus finished cDNA, clone ChEST629e1 Length = 1417 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 ctctcgatgacggagagctc 274 |||||||||||||||||||| Sbjct: 319 ctctcgatgacggagagctc 300
>ref|XM_309937.2| Anopheles gambiae str. PEST ENSANGP00000004373 (ENSANGG00000003447), partial mRNA Length = 2550 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 acttgaagacgctctcgatg 263 |||||||||||||||||||| Sbjct: 1457 acttgaagacgctctcgatg 1476
>gb|AF147789.1|AF147789 Mus musculus melanopsin mRNA, complete cds Length = 2137 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 tcagcgacttcctcatgtca 212 |||||||||||||||||||| Sbjct: 522 tcagcgacttcctcatgtca 541 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,275,116 Number of Sequences: 3902068 Number of extensions: 3275116 Number of successful extensions: 53936 Number of sequences better than 10.0: 134 Number of HSP's better than 10.0 without gapping: 130 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 53695 Number of HSP's gapped (non-prelim): 232 length of query: 508 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 486 effective length of database: 17,147,199,772 effective search space: 8333539089192 effective search space used: 8333539089192 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)