ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart09f07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470566.1| Oryza sativa (japonica cultivar-group), predic... 222 7e-55
2dbj|AK100621.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 7e-55
3dbj|AK112046.1| Oryza sativa (japonica cultivar-group) cDNA clon... 214 2e-52
4gb|AF023164.1|AF023164 Zea mays leucine-rich repeat transmembran... 190 3e-45
5ref|NM_196278.1| Oryza sativa (japonica cultivar-group) putative... 176 4e-41
6gb|AY224517.1| Oryza sativa (japonica cultivar-group) isolate 20... 176 4e-41
7dbj|AK111516.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 4e-41
8gb|AY109511.1| Zea mays CL1762_1 mRNA sequence 161 2e-36
9gb|AF023165.1|AF023165 Zea mays leucine-rich repeat transmembran... 161 2e-36
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 145 1e-31
11gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nippon... 145 1e-31
12dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 145 1e-31
13gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome... 101 2e-18
14dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
15gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 101 2e-18
16ref|XM_470876.1| Oryza sativa (japonica cultivar-group), mRNA 94 4e-16
17dbj|AK111995.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 4e-16
18dbj|AK111635.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 4e-16
19ref|NM_189831.1| Oryza sativa (japonica cultivar-group), mRNA 86 1e-13
20dbj|AK111826.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
21dbj|AK111671.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
22gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence 76 1e-10
23gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence 76 1e-10
24gb|AC091787.6| Oryza sativa (japonica cultivar-group) chromosome... 74 4e-10
25dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
26dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
27dbj|AP004309.3| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
28dbj|AP004308.3| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
29gb|AC135796.25| Medicago truncatula clone mth2-28b18, complete s... 52 0.002
30dbj|AP006733.1| Lotus japonicus genomic DNA, chromosome 1, clone... 44 0.37
31ref|XM_463595.1| Oryza sativa (japonica cultivar-group), predic... 42 1.5
32gb|AC006267.1| Arabidopsis thaliana BAC F9M13 from chromosome IV... 42 1.5
33emb|AL161510.2|ATCHRIV22 Arabidopsis thaliana DNA chromosome 4, ... 42 1.5
34dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
35emb|BX828431.1|CNS0A3VU Arabidopsis thaliana Full-length cDNA Co... 42 1.5
36emb|BX827626.1|CNS0A3N0 Arabidopsis thaliana Full-length cDNA Co... 42 1.5
37dbj|AP003416.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
38dbj|AK120075.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
39dbj|AK111551.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
40gb|AC022682.16| Mus musculus chromosome 13, clone RP23-476E21, c... 40 5.7
41gb|AC133653.4| Mus musculus BAC clone RP24-320J12 from chromosom... 40 5.7
42emb|CT009713.8| Mouse DNA sequence from clone RP23-151C6 on chro... 40 5.7
43emb|CR656745.2|CNS0F5PR Tetraodon nigroviridis full-length cDNA 40 5.7
44emb|CR656179.2|CNS0F5A1 Tetraodon nigroviridis full-length cDNA 40 5.7
45emb|CR654462.2|CNS0F3YC Tetraodon nigroviridis full-length cDNA 40 5.7
46emb|CR654459.2|CNS0F3Y9 Tetraodon nigroviridis full-length cDNA 40 5.7
47emb|CR648125.2|CNS0EZ2B Tetraodon nigroviridis full-length cDNA 40 5.7
48emb|CR644110.2|CNS0EVYS Tetraodon nigroviridis full-length cDNA 40 5.7
49emb|CR641782.2|CNS0EU64 Tetraodon nigroviridis full-length cDNA 40 5.7
50emb|CR640513.2|CNS0ET6V Tetraodon nigroviridis full-length cDNA 40 5.7
51emb|CR640289.2|CNS0ET0N Tetraodon nigroviridis full-length cDNA 40 5.7
52emb|CR637383.2|CNS0EQRX Tetraodon nigroviridis full-length cDNA 40 5.7
53emb|CR637350.2|CNS0EQR0 Tetraodon nigroviridis full-length cDNA 40 5.7
54emb|CR633760.2|CNS0ENZA Tetraodon nigroviridis full-length cDNA 40 5.7
55emb|Z93931.1|HS438G17 Human DNA sequence from clone RP3-438G17 o... 40 5.7
56gb|AC158781.4| Mus musculus chromosome 7, clone RP23-264H19, com... 40 5.7
57emb|BX828170.1|CNS0A2FW Arabidopsis thaliana Full-length cDNA Co... 40 5.7 
>ref|XM_470566.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2157

 Score =  222 bits (112), Expect = 7e-55
 Identities = 184/208 (88%)
 Strand = Plus / Minus

                                                                        
Query: 217  tcgagcattttcttcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacc 276
            ||||||||| ||||||||||||| |||||||| || ||||| ||||  || |||||||||
Sbjct: 2105 tcgagcattctcttcgtcatgttggccctctggacaagacgaaccaatgcttgcaccacc 2046

                                                                        
Query: 277  tccgacatcggtggcctgaattccggctcagcctggacacacaaggcaagcacgtcggcg 336
            || ||||| |||||||||||||| || |||| |||||||||||| || ||||||||||| 
Sbjct: 2045 tctgacattggtggcctgaattctggttcaggctggacacacaaagcgagcacgtcggca 1986

                                                                        
Query: 337  aatcgtgaaagagacttggcagggtacagacccttgagcgcaggatcgaccatcctgtcc 396
            || || || |||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 1985 aaccgggagagagacttggcagggtacagacccttcagcgcaggatcgaccattctgtcc 1926

                                        
Query: 397  aacgcatcgatgtcgtggagctggggag 424
            || ||||||||||| |||||||| ||||
Sbjct: 1925 aatgcatcgatgtcatggagctgtggag 1898
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>dbj|AK100621.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108F23, full
            insert sequence
          Length = 2637

 Score =  222 bits (112), Expect = 7e-55
 Identities = 184/208 (88%)
 Strand = Plus / Minus

                                                                        
Query: 217  tcgagcattttcttcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacc 276
            ||||||||| ||||||||||||| |||||||| || ||||| ||||  || |||||||||
Sbjct: 2337 tcgagcattctcttcgtcatgttggccctctggacaagacgaaccaatgcttgcaccacc 2278

                                                                        
Query: 277  tccgacatcggtggcctgaattccggctcagcctggacacacaaggcaagcacgtcggcg 336
            || ||||| |||||||||||||| || |||| |||||||||||| || ||||||||||| 
Sbjct: 2277 tctgacattggtggcctgaattctggttcaggctggacacacaaagcgagcacgtcggca 2218

                                                                        
Query: 337  aatcgtgaaagagacttggcagggtacagacccttgagcgcaggatcgaccatcctgtcc 396
            || || || |||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 2217 aaccgggagagagacttggcagggtacagacccttcagcgcaggatcgaccattctgtcc 2158

                                        
Query: 397  aacgcatcgatgtcgtggagctggggag 424
            || ||||||||||| |||||||| ||||
Sbjct: 2157 aatgcatcgatgtcatggagctgtggag 2130
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>dbj|AK112046.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C09, full
            insert sequence
          Length = 1721

 Score =  214 bits (108), Expect = 2e-52
 Identities = 183/208 (87%)
 Strand = Plus / Minus

                                                                        
Query: 217  tcgagcattttcttcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacc 276
            ||||||||| ||||||||||||| |||||||| || ||||| ||||  || |||||||||
Sbjct: 1426 tcgagcattctcttcgtcatgttggccctctggacaagacgaaccaatgcttgcaccacc 1367

                                                                        
Query: 277  tccgacatcggtggcctgaattccggctcagcctggacacacaaggcaagcacgtcggcg 336
            || ||||| |||||||||||||| || |||| |||||||||||| || ||||||||||| 
Sbjct: 1366 tctgacattggtggcctgaattctggttcaggctggacacacaaagcgagcacgtcggca 1307

                                                                        
Query: 337  aatcgtgaaagagacttggcagggtacagacccttgagcgcaggatcgaccatcctgtcc 396
            || || || |||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 1306 aaccgggagagagacttggcagggtacagacccttcagcgcaggatcgaccattctgtcc 1247

                                        
Query: 397  aacgcatcgatgtcgtggagctggggag 424
            || |||||||||||  ||||||| ||||
Sbjct: 1246 aatgcatcgatgtcacggagctgtggag 1219
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>gb|AF023164.1|AF023164 Zea mays leucine-rich repeat transmembrane protein kinase 1 (ltk1)
            mRNA, partial cds
          Length = 2310

 Score =  190 bits (96), Expect = 3e-45
 Identities = 215/255 (84%)
 Strand = Plus / Minus

                                                                        
Query: 168  tcatatgaaatcctggtcctggtcatcgcctcgccgggaagcgtcgccntcgagcatttt 227
            |||||||||||| |||||| |||||||   |||||| ||||  || || || |||||  |
Sbjct: 2057 tcatatgaaatcttggtccaggtcatctggtcgccgagaagtatccccatcaagcatcct 1998

                                                                        
Query: 228  cttcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacctccgacatcgg 287
            |||||||||||| ||||||||||| || || ||||  || ||||||||||| ||||| ||
Sbjct: 1997 cttcgtcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattgg 1938

                                                                        
Query: 288  tggcctgaattccggctcagcctggacacacaaggcaagcacgtcggcgaatcgtgaaag 347
            |||||||||||| || |||| ||||||||||| |||||| || || || ||||| || ||
Sbjct: 1937 tggcctgaattctggttcaggctggacacacagggcaaggacatcagcaaatcgggatag 1878

                                                                        
Query: 348  agacttggcagggtacagacccttgagcgcaggatcgaccatcctgtccaacgcatcgat 407
            ||| ||||| ||||| ||||||||||| ||||||||||||||||||||||| || |||||
Sbjct: 1877 agatttggctgggtatagacccttgagtgcaggatcgaccatcctgtccaatgcgtcgat 1818

                           
Query: 408  gtcgtggagctgggg 422
            ||| || ||||||||
Sbjct: 1817 gtcatgcagctgggg 1803
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>ref|NM_196278.1| Oryza sativa (japonica cultivar-group) putative leucine-rich repeat
            transmembrane protein kinase 1 (OSJNBb0061I18.16), mRNA
          Length = 2211

 Score =  176 bits (89), Expect = 4e-41
 Identities = 181/212 (85%)
 Strand = Plus / Minus

                                                                        
Query: 211  tcgccntcgagcattttcttcgtcatgttagccctctgcacgagacggaccagcgcctgc 270
            ||||| |||| |||| || | |||||||| |||||||| || || ||||||||||| |||
Sbjct: 2165 tcgccgtcgatcattctcctagtcatgttggccctctgaacaaggcggaccagcgcttgc 2106

                                                                        
Query: 271  accacctccgacatcggtggcctgaattccggctcagcctggacacacaaggcaagcacg 330
            |||||||| |||||||| || ||||| |||||||||| |||||||||||  ||||  |||
Sbjct: 2105 accacctcagacatcggcggtctgaactccggctcaggctggacacacagcgcaatgacg 2046

                                                                        
Query: 331  tcggcgaatcgtgaaagagacttggcagggtacagacccttgagcgcaggatcgaccatc 390
            || ||||| || || || || |||||||||||||| ||||||||||| || |||||||||
Sbjct: 2045 tctgcgaaacgggacagggatttggcagggtacaggcccttgagcgctgggtcgaccatc 1986

                                            
Query: 391  ctgtccaacgcatcgatgtcgtggagctgggg 422
            | |||||||||||||||||| || ||||||||
Sbjct: 1985 cggtccaacgcatcgatgtcatgcagctgggg 1954
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>gb|AY224517.1| Oryza sativa (japonica cultivar-group) isolate 20144 putative
            leucine-rich repeat transmembrane protein kinase mRNA,
            complete cds
          Length = 2202

 Score =  176 bits (89), Expect = 4e-41
 Identities = 181/212 (85%)
 Strand = Plus / Minus

                                                                        
Query: 211  tcgccntcgagcattttcttcgtcatgttagccctctgcacgagacggaccagcgcctgc 270
            ||||| |||| |||| || | |||||||| |||||||| || || ||||||||||| |||
Sbjct: 2156 tcgccgtcgatcattctcctagtcatgttggccctctgaacaaggcggaccagcgcttgc 2097

                                                                        
Query: 271  accacctccgacatcggtggcctgaattccggctcagcctggacacacaaggcaagcacg 330
            |||||||| |||||||| || ||||| |||||||||| |||||||||||  ||||  |||
Sbjct: 2096 accacctcagacatcggcggtctgaactccggctcaggctggacacacagcgcaatgacg 2037

                                                                        
Query: 331  tcggcgaatcgtgaaagagacttggcagggtacagacccttgagcgcaggatcgaccatc 390
            || ||||| || || || || |||||||||||||| ||||||||||| || |||||||||
Sbjct: 2036 tctgcgaaacgggacagggatttggcagggtacaggcccttgagcgctgggtcgaccatc 1977

                                            
Query: 391  ctgtccaacgcatcgatgtcgtggagctgggg 422
            | |||||||||||||||||| || ||||||||
Sbjct: 1976 cggtccaacgcatcgatgtcatgcagctgggg 1945
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>dbj|AK111516.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F24, full
            insert sequence
          Length = 2433

 Score =  176 bits (89), Expect = 4e-41
 Identities = 181/212 (85%)
 Strand = Plus / Minus

                                                                        
Query: 211  tcgccntcgagcattttcttcgtcatgttagccctctgcacgagacggaccagcgcctgc 270
            ||||| |||| |||| || | |||||||| |||||||| || || ||||||||||| |||
Sbjct: 2175 tcgccgtcgatcattctcctagtcatgttggccctctgaacaaggcggaccagcgcttgc 2116

                                                                        
Query: 271  accacctccgacatcggtggcctgaattccggctcagcctggacacacaaggcaagcacg 330
            |||||||| |||||||| || ||||| |||||||||| |||||||||||  ||||  |||
Sbjct: 2115 accacctcagacatcggcggtctgaactccggctcaggctggacacacagcgcaatgacg 2056

                                                                        
Query: 331  tcggcgaatcgtgaaagagacttggcagggtacagacccttgagcgcaggatcgaccatc 390
            || ||||| || || || || |||||||||||||| ||||||||||| || |||||||||
Sbjct: 2055 tctgcgaaacgggacagggatttggcagggtacaggcccttgagcgctgggtcgaccatc 1996

                                            
Query: 391  ctgtccaacgcatcgatgtcgtggagctgggg 422
            | |||||||||||||||||| || ||||||||
Sbjct: 1995 cggtccaacgcatcgatgtcatgcagctgggg 1964
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>gb|AY109511.1| Zea mays CL1762_1 mRNA sequence
          Length = 2393

 Score =  161 bits (81), Expect = 2e-36
 Identities = 165/193 (85%)
 Strand = Plus / Minus

                                                                        
Query: 227  tcttcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacctccgacatcg 286
            ||||||||||||| ||||||||||| || || ||||  || ||||||||||| ||||| |
Sbjct: 2220 tcttcgtcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattg 2161

                                                                        
Query: 287  gtggcctgaattccggctcagcctggacacacaaggcaagcacgtcggcgaatcgtgaaa 346
            ||||||||||||| || |||| ||||||||||| ||| || || || || ||||| || |
Sbjct: 2160 gtggcctgaattctggttcaggctggacacacagggcgaggacatcagcaaatcgggata 2101

                                                                        
Query: 347  gagacttggcagggtacagacccttgagcgcaggatcgaccatcctgtccaacgcatcga 406
            |||| ||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||||
Sbjct: 2100 gagatttggctgggtatagacccttgagtgcaggatcgaccattctgtccaatgcatcga 2041

                         
Query: 407  tgtcgtggagctg 419
            |||| || |||||
Sbjct: 2040 tgtcatgcagctg 2028
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>gb|AF023165.1|AF023165 Zea mays leucine-rich repeat transmembrane protein kinase 2 (ltk2)
            mRNA, complete cds
          Length = 2388

 Score =  161 bits (81), Expect = 2e-36
 Identities = 165/193 (85%)
 Strand = Plus / Minus

                                                                        
Query: 227  tcttcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacctccgacatcg 286
            ||||||||||||| ||||||||||| || || ||||  || ||||||||||| ||||| |
Sbjct: 2215 tcttcgtcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattg 2156

                                                                        
Query: 287  gtggcctgaattccggctcagcctggacacacaaggcaagcacgtcggcgaatcgtgaaa 346
            ||||||||||||| || |||| ||||||||||| ||| || || || || ||||| || |
Sbjct: 2155 gtggcctgaattctggttcaggctggacacacagggcgaggacatcagcaaatcgggata 2096

                                                                        
Query: 347  gagacttggcagggtacagacccttgagcgcaggatcgaccatcctgtccaacgcatcga 406
            |||| ||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||||
Sbjct: 2095 gagatttggctgggtatagacccttgagtgcaggatcgaccattctgtccaatgcatcga 2036

                         
Query: 407  tgtcgtggagctg 419
            |||| || |||||
Sbjct: 2035 tgtcatgcagctg 2023
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  145 bits (73), Expect = 1e-31
 Identities = 106/117 (90%)
 Strand = Plus / Minus

                                                                           
Query: 308     cctggacacacaaggcaagcacgtcggcgaatcgtgaaagagacttggcagggtacagac 367
               ||||||||||||| || ||||||||||| || || || ||||||||||||||||||||||
Sbjct: 4384120 cctggacacacaaagcgagcacgtcggcaaaccgggagagagacttggcagggtacagac 4384061

                                                                        
Query: 368     ccttgagcgcaggatcgaccatcctgtccaacgcatcgatgtcgtggagctggggag 424
               |||| ||||||||||||||||| |||||||| ||||||||||| |||||||| ||||
Sbjct: 4384060 ccttcagcgcaggatcgaccattctgtccaatgcatcgatgtcatggagctgtggag 4384004



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                           
Query: 217     tcgagcattttcttcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacc 276
               ||||||||| ||||||||||||| |||||||| || ||||| ||||  || |||||||||
Sbjct: 4384310 tcgagcattctcttcgtcatgttggccctctggacaagacgaaccaatgcttgcaccacc 4384251

                                      
Query: 277     tccgacatcggtggcctgaattc 299
               || ||||| ||||||||||||||
Sbjct: 4384250 tctgacattggtggcctgaattc 4384228



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                            
Query: 243      cctctgcacgagacggaccagcgcctgcaccacctccgacatcggtggcctgaattccgg 302
                |||||||||||| ||||| |  | ||| || |||||||||||||||||||||||||||||
Sbjct: 15911391 cctctgcacgagccggactaaggactggacgacctccgacatcggtggcctgaattccgg 15911450

                     
Query: 303      ctcag 307
                |||||
Sbjct: 15911451 ctcag 15911455



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 78/97 (80%)
 Strand = Plus / Plus

                                                                            
Query: 329      cgtcggcgaatcgtgaaagagacttggcagggtacagacccttgagcgcaggatcgacca 388
                ||||||||||||| || || || || ||||||||||| || |  || || ||||| ||||
Sbjct: 15911574 cgtcggcgaatcgagagagggattttgcagggtacagtccttccagtgctggatctacca 15911633

                                                     
Query: 389      tcctgtccaacgcatcgatgtcgtggagctggggaga 425
                ||   || |||||||||||||| || ||||| |||||
Sbjct: 15911634 tctgatctaacgcatcgatgtcatgaagctgcggaga 15911670
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>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0032G08, from Chromosome 3, complete sequence
          Length = 122052

 Score =  145 bits (73), Expect = 1e-31
 Identities = 106/117 (90%)
 Strand = Plus / Plus

                                                                         
Query: 308   cctggacacacaaggcaagcacgtcggcgaatcgtgaaagagacttggcagggtacagac 367
             ||||||||||||| || ||||||||||| || || || ||||||||||||||||||||||
Sbjct: 42377 cctggacacacaaagcgagcacgtcggcaaaccgggagagagacttggcagggtacagac 42436

                                                                      
Query: 368   ccttgagcgcaggatcgaccatcctgtccaacgcatcgatgtcgtggagctggggag 424
             |||| ||||||||||||||||| |||||||| ||||||||||| |||||||| ||||
Sbjct: 42437 ccttcagcgcaggatcgaccattctgtccaatgcatcgatgtcatggagctgtggag 42493



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                         
Query: 217   tcgagcattttcttcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacc 276
             ||||||||| ||||||||||||| |||||||| || ||||| ||||  || |||||||||
Sbjct: 42187 tcgagcattctcttcgtcatgttggccctctggacaagacgaaccaatgcttgcaccacc 42246

                                    
Query: 277   tccgacatcggtggcctgaattc 299
             || ||||| ||||||||||||||
Sbjct: 42247 tctgacattggtggcctgaattc 42269
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  145 bits (73), Expect = 1e-31
 Identities = 106/117 (90%)
 Strand = Plus / Minus

                                                                           
Query: 308     cctggacacacaaggcaagcacgtcggcgaatcgtgaaagagacttggcagggtacagac 367
               ||||||||||||| || ||||||||||| || || || ||||||||||||||||||||||
Sbjct: 4384235 cctggacacacaaagcgagcacgtcggcaaaccgggagagagacttggcagggtacagac 4384176

                                                                        
Query: 368     ccttgagcgcaggatcgaccatcctgtccaacgcatcgatgtcgtggagctggggag 424
               |||| ||||||||||||||||| |||||||| ||||||||||| |||||||| ||||
Sbjct: 4384175 ccttcagcgcaggatcgaccattctgtccaatgcatcgatgtcatggagctgtggag 4384119



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                           
Query: 217     tcgagcattttcttcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacc 276
               ||||||||| ||||||||||||| |||||||| || ||||| ||||  || |||||||||
Sbjct: 4384425 tcgagcattctcttcgtcatgttggccctctggacaagacgaaccaatgcttgcaccacc 4384366

                                      
Query: 277     tccgacatcggtggcctgaattc 299
               || ||||| ||||||||||||||
Sbjct: 4384365 tctgacattggtggcctgaattc 4384343



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                            
Query: 243      cctctgcacgagacggaccagcgcctgcaccacctccgacatcggtggcctgaattccgg 302
                |||||||||||| ||||| |  | ||| || |||||||||||||||||||||||||||||
Sbjct: 15905925 cctctgcacgagccggactaaggactggacgacctccgacatcggtggcctgaattccgg 15905984

                     
Query: 303      ctcag 307
                |||||
Sbjct: 15905985 ctcag 15905989



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 78/97 (80%)
 Strand = Plus / Plus

                                                                            
Query: 329      cgtcggcgaatcgtgaaagagacttggcagggtacagacccttgagcgcaggatcgacca 388
                ||||||||||||| || || || || ||||||||||| || |  || || ||||| ||||
Sbjct: 15906108 cgtcggcgaatcgagagagggattttgcagggtacagtccttccagtgctggatctacca 15906167

                                                     
Query: 389      tcctgtccaacgcatcgatgtcgtggagctggggaga 425
                ||   || |||||||||||||| || ||||| |||||
Sbjct: 15906168 tctgatctaacgcatcgatgtcatgaagctgcggaga 15906204
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>gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome X clone
             OSJNBb0061I18, complete sequence
          Length = 143163

 Score =  101 bits (51), Expect = 2e-18
 Identities = 99/115 (86%)
 Strand = Plus / Minus

                                                                         
Query: 308   cctggacacacaaggcaagcacgtcggcgaatcgtgaaagagacttggcagggtacagac 367
             ||||||||||||  ||||  ||||| ||||| || || || || |||||||||||||| |
Sbjct: 97164 cctggacacacagcgcaatgacgtctgcgaaacgggacagggatttggcagggtacaggc 97105

                                                                    
Query: 368   ccttgagcgcaggatcgaccatcctgtccaacgcatcgatgtcgtggagctgggg 422
             |||||||||| || |||||||||| |||||||||||||||||| || ||||||||
Sbjct: 97104 ccttgagcgctgggtcgaccatccggtccaacgcatcgatgtcatgcagctgggg 97050



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                         
Query: 211   tcgccntcgagcattttcttcgtcatgttagccctctgcacgagacggaccagcgcctgc 270
             ||||| |||| |||| || | |||||||| |||||||| || || ||||||||||| |||
Sbjct: 97361 tcgccgtcgatcattctcctagtcatgttggccctctgaacaaggcggaccagcgcttgc 97302

                                                  
Query: 271   accacctccgacatcggtggcctgaattccggctcag 307
             |||||||| |||||||| || ||||| ||||||||||
Sbjct: 97301 accacctcagacatcggcggtctgaactccggctcag 97265
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  101 bits (51), Expect = 2e-18
 Identities = 99/115 (86%)
 Strand = Plus / Plus

                                                                            
Query: 308      cctggacacacaaggcaagcacgtcggcgaatcgtgaaagagacttggcagggtacagac 367
                ||||||||||||  ||||  ||||| ||||| || || || || |||||||||||||| |
Sbjct: 12407011 cctggacacacagcgcaatgacgtctgcgaaacgggacagggatttggcagggtacaggc 12407070

                                                                       
Query: 368      ccttgagcgcaggatcgaccatcctgtccaacgcatcgatgtcgtggagctgggg 422
                |||||||||| || |||||||||| |||||||||||||||||| || ||||||||
Sbjct: 12407071 ccttgagcgctgggtcgaccatccggtccaacgcatcgatgtcatgcagctgggg 12407125



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 83/97 (85%)
 Strand = Plus / Plus

                                                                            
Query: 211      tcgccntcgagcattttcttcgtcatgttagccctctgcacgagacggaccagcgcctgc 270
                ||||| |||| |||| || | |||||||| |||||||| || || ||||||||||| |||
Sbjct: 12406814 tcgccgtcgatcattctcctagtcatgttggccctctgaacaaggcggaccagcgcttgc 12406873

                                                     
Query: 271      accacctccgacatcggtggcctgaattccggctcag 307
                |||||||| |||||||| || ||||| ||||||||||
Sbjct: 12406874 accacctcagacatcggcggtctgaactccggctcag 12406910
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  101 bits (51), Expect = 2e-18
 Identities = 99/115 (86%)
 Strand = Plus / Plus

                                                                            
Query: 308      cctggacacacaaggcaagcacgtcggcgaatcgtgaaagagacttggcagggtacagac 367
                ||||||||||||  ||||  ||||| ||||| || || || || |||||||||||||| |
Sbjct: 12414351 cctggacacacagcgcaatgacgtctgcgaaacgggacagggatttggcagggtacaggc 12414410

                                                                       
Query: 368      ccttgagcgcaggatcgaccatcctgtccaacgcatcgatgtcgtggagctgggg 422
                |||||||||| || |||||||||| |||||||||||||||||| || ||||||||
Sbjct: 12414411 ccttgagcgctgggtcgaccatccggtccaacgcatcgatgtcatgcagctgggg 12414465



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 83/97 (85%)
 Strand = Plus / Plus

                                                                            
Query: 211      tcgccntcgagcattttcttcgtcatgttagccctctgcacgagacggaccagcgcctgc 270
                ||||| |||| |||| || | |||||||| |||||||| || || ||||||||||| |||
Sbjct: 12414154 tcgccgtcgatcattctcctagtcatgttggccctctgaacaaggcggaccagcgcttgc 12414213

                                                     
Query: 271      accacctccgacatcggtggcctgaattccggctcag 307
                |||||||| |||||||| || ||||| ||||||||||
Sbjct: 12414214 accacctcagacatcggcggtctgaactccggctcag 12414250
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>ref|XM_470876.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2272

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 149/183 (81%)
 Strand = Plus / Minus

                                                                        
Query: 243  cctctgcacgagacggaccagcgcctgcaccacctccgacatcggtggcctgaattccgg 302
            |||||||||||| ||||| |  | ||| || |||||||||||||||||||||||||||||
Sbjct: 2184 cctctgcacgagccggactaaggactggacgacctccgacatcggtggcctgaattccgg 2125

                                                                        
Query: 303  ctcagcctggacacacaaggcaagcacgtcggcgaatcgtgaaagagacttggcagggta 362
            ||||| ||||||||| |  || |   ||||||||||||| || || || || ||||||||
Sbjct: 2124 ctcaggctggacacagagcgcgattgcgtcggcgaatcgagagagggattttgcagggta 2065

                                                                        
Query: 363  cagacccttgagcgcaggatcgaccatcctgtccaacgcatcgatgtcgtggagctgggg 422
            ||| || |  || || ||||| ||||||   || |||||||||||||| || ||||| ||
Sbjct: 2064 cagtccttccagtgctggatctaccatctgatctaacgcatcgatgtcatgaagctgcgg 2005

               
Query: 423  aga 425
            |||
Sbjct: 2004 aga 2002
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>dbj|AK111995.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-G05, full
            insert sequence
          Length = 1758

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 149/183 (81%)
 Strand = Plus / Minus

                                                                        
Query: 243  cctctgcacgagacggaccagcgcctgcaccacctccgacatcggtggcctgaattccgg 302
            |||||||||||| ||||| |  | ||| || |||||||||||||||||||||||||||||
Sbjct: 1461 cctctgcacgagccggactaaggactggacgacctccgacatcggtggcctgaattccgg 1402

                                                                        
Query: 303  ctcagcctggacacacaaggcaagcacgtcggcgaatcgtgaaagagacttggcagggta 362
            ||||| ||||||||| |  || |   ||||||||||||| || || || || ||||||||
Sbjct: 1401 ctcaggctggacacagagcgcgattgcgtcggcgaatcgagagagggattttgcagggta 1342

                                                                        
Query: 363  cagacccttgagcgcaggatcgaccatcctgtccaacgcatcgatgtcgtggagctgggg 422
            ||| || |  || || ||||| ||||||   || |||||||||||||| || ||||| ||
Sbjct: 1341 cagtccttccagtgctggatctaccatctgatctaacgcatcgatgtcatgaagctgcgg 1282

               
Query: 423  aga 425
            |||
Sbjct: 1281 aga 1279
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>dbj|AK111635.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119H22, full
            insert sequence
          Length = 2638

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 149/183 (81%)
 Strand = Plus / Minus

                                                                        
Query: 243  cctctgcacgagacggaccagcgcctgcaccacctccgacatcggtggcctgaattccgg 302
            |||||||||||| ||||| |  | ||| || |||||||||||||||||||||||||||||
Sbjct: 2265 cctctgcacgagccggactaaggactggacgacctccgacatcggtggcctgaattccgg 2206

                                                                        
Query: 303  ctcagcctggacacacaaggcaagcacgtcggcgaatcgtgaaagagacttggcagggta 362
            ||||| ||||||||| |  || |   ||||||||||||| || || || || ||||||||
Sbjct: 2205 ctcaggctggacacagagcgcgattgcgtcggcgaatcgagagagggattttgcagggta 2146

                                                                        
Query: 363  cagacccttgagcgcaggatcgaccatcctgtccaacgcatcgatgtcgtggagctgggg 422
            ||| || |  || || ||||| ||||||   || |||||||||||||| || ||||| ||
Sbjct: 2145 cagtccttccagtgctggatctaccatctgatctaacgcatcgatgtcatgaagctgcgg 2086

               
Query: 423  aga 425
            |||
Sbjct: 2085 aga 2083
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>ref|NM_189831.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2163

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 157/195 (80%)
 Strand = Plus / Minus

                                                                        
Query: 230  tcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacctccgacatcggtg 289
            |||||||||| || |||||||| || |||||||||  ||| || |||||||||||||| |
Sbjct: 2095 tcgtcatgttggctctctgcacaaggcggaccagcaactggacgacctccgacatcggcg 2036

                                                                        
Query: 290  gcctgaattccggctcagcctggacacacaaggcaagcacgtcggcgaatcgtgaaagag 349
            ||||||| ||||| || | ||| || || |  || | | |||| ||||| || || || |
Sbjct: 2035 gcctgaactccggttcggactgaacgcagagcgcgatcgcgtcagcgaagcgggagagcg 1976

                                                                        
Query: 350  acttggcagggtacagacccttgagcgcaggatcgaccatcctgtccaacgcatcgatgt 409
            | || | ||||||||| |||| ||| ||||| |||||||||  |||||| || |||||||
Sbjct: 1975 atttcgaagggtacagcccctggagtgcagggtcgaccatctggtccaaagcgtcgatgt 1916

                           
Query: 410  cgtggagctggggag 424
            |||| ||||||||||
Sbjct: 1915 cgtgcagctggggag 1901
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>dbj|AK111826.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061M23, full
            insert sequence
          Length = 3008

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 157/195 (80%)
 Strand = Plus / Minus

                                                                        
Query: 230  tcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacctccgacatcggtg 289
            |||||||||| || |||||||| || |||||||||  ||| || |||||||||||||| |
Sbjct: 2698 tcgtcatgttggctctctgcacaaggcggaccagcaactggacgacctccgacatcggcg 2639

                                                                        
Query: 290  gcctgaattccggctcagcctggacacacaaggcaagcacgtcggcgaatcgtgaaagag 349
            ||||||| ||||| || | ||| || || |  || | | |||| ||||| || || || |
Sbjct: 2638 gcctgaactccggttcggactgaacgcagagcgcgatcgcgtcagcgaagcgggagagcg 2579

                                                                        
Query: 350  acttggcagggtacagacccttgagcgcaggatcgaccatcctgtccaacgcatcgatgt 409
            | || | ||||||||| |||| ||| ||||| |||||||||  |||||| || |||||||
Sbjct: 2578 atttcgaagggtacagcccctggagtgcagggtcgaccatctggtccaaagcgtcgatgt 2519

                           
Query: 410  cgtggagctggggag 424
            |||| ||||||||||
Sbjct: 2518 cgtgcagctggggag 2504
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>dbj|AK111671.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154F15, full
            insert sequence
          Length = 2732

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 157/195 (80%)
 Strand = Plus / Minus

                                                                        
Query: 230  tcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacctccgacatcggtg 289
            |||||||||| || |||||||| || |||||||||  ||| || |||||||||||||| |
Sbjct: 2393 tcgtcatgttggctctctgcacaaggcggaccagcaactggacgacctccgacatcggcg 2334

                                                                        
Query: 290  gcctgaattccggctcagcctggacacacaaggcaagcacgtcggcgaatcgtgaaagag 349
            ||||||| ||||| || | ||| || || |  || | | |||| ||||| || || || |
Sbjct: 2333 gcctgaactccggttcggactgaacgcagagcgcgatcgcgtcagcgaagcgggagagcg 2274

                                                                        
Query: 350  acttggcagggtacagacccttgagcgcaggatcgaccatcctgtccaacgcatcgatgt 409
            | || | ||||||||| |||| ||| ||||| |||||||||  |||||| || |||||||
Sbjct: 2273 atttcgaagggtacagcccctggagtgcagggtcgaccatctggtccaaagcgtcgatgt 2214

                           
Query: 410  cgtggagctggggag 424
            |||| ||||||||||
Sbjct: 2213 cgtgcagctggggag 2199
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>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence
          Length = 405672

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                          
Query: 230    tcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacctccgacatcggtg 289
              |||||||||| ||||||||||| || || ||||||| |||||| |||||||||||||| |
Sbjct: 173478 tcgtcatgttcgccctctgcaccaggcgcaccagcgactgcacgacctccgacatcggcg 173419

                                
Query: 290    gcctgaattccggctcag 307
              |||  || ||||||||||
Sbjct: 173418 gccgaaactccggctcag 173401



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                  
Query: 373    agcgcaggatcgaccatcctgtccaacgcatcgatgtcgtggagctggggag 424
              ||||| || |||||||||  ||||| ||| ||||||||||| ||||| ||||
Sbjct: 173249 agcgcggggtcgaccatctggtccagcgcgtcgatgtcgtgcagctgcggag 173198
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>gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence
          Length = 323584

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                          
Query: 230    tcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacctccgacatcggtg 289
              |||||||||| ||||||||||| || || ||||||| |||||| |||||||||||||| |
Sbjct: 161580 tcgtcatgttcgccctctgcaccaggcgcaccagcgactgcacgacctccgacatcggcg 161521

                                
Query: 290    gcctgaattccggctcag 307
              |||  || ||||||||||
Sbjct: 161520 gccgaaactccggctcag 161503



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                  
Query: 373    agcgcaggatcgaccatcctgtccaacgcatcgatgtcgtggagctggggag 424
              ||||| || |||||||||  ||||| ||| ||||||||||| ||||| ||||
Sbjct: 161351 agcgcggggtcgaccatctggtccagcgcgtcgatgtcgtgcagctgcggag 161300
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>gb|AC091787.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0087G11,
              complete sequence
          Length = 169728

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                          
Query: 243    cctctgcacgagacggaccagcgcctgcaccacctccgacatcggtggcctgaattccgg 302
              |||||||||||| ||||| |  | ||| || |||||||||||||||||||||||||||||
Sbjct: 139026 cctctgcacgagccggactaaggactggacgacctccgacatcggtggcctgaattccgg 138967

                   
Query: 303    ctcag 307
              |||||
Sbjct: 138966 ctcag 138962



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 78/97 (80%)
 Strand = Plus / Minus

                                                                          
Query: 329    cgtcggcgaatcgtgaaagagacttggcagggtacagacccttgagcgcaggatcgacca 388
              ||||||||||||| || || || || ||||||||||| || |  || || ||||| ||||
Sbjct: 138843 cgtcggcgaatcgagagagggattttgcagggtacagtccttccagtgctggatctacca 138784

                                                   
Query: 389    tcctgtccaacgcatcgatgtcgtggagctggggaga 425
              ||   || |||||||||||||| || ||||| |||||
Sbjct: 138783 tctgatctaacgcatcgatgtcatgaagctgcggaga 138747
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                            
Query: 230      tcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacctccgacatcggtg 289
                |||||||||| || |||||||| || |||||||||  ||| || |||||||||||||| |
Sbjct: 25469263 tcgtcatgttggctctctgcacaaggcggaccagcaactggacgacctccgacatcggcg 25469204

                             
Query: 290      gcctgaattccgg 302
                ||||||| |||||
Sbjct: 25469203 gcctgaactccgg 25469191



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                            
Query: 357      agggtacagacccttgagcgcaggatcgaccatcctgtccaacgcatcgatgtcgtggag 416
                ||||||||| |||| ||| ||||| |||||||||  |||||| || ||||||||||| ||
Sbjct: 25468998 agggtacagcccctggagtgcagggtcgaccatctggtccaaagcgtcgatgtcgtgcag 25468939

                        
Query: 417      ctggggag 424
                ||||||||
Sbjct: 25468938 ctggggag 25468931
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>dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1056G08
          Length = 168173

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                          
Query: 230    tcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacctccgacatcggtg 289
              |||||||||| || |||||||| || |||||||||  ||| || |||||||||||||| |
Sbjct: 162353 tcgtcatgttggctctctgcacaaggcggaccagcaactggacgacctccgacatcggcg 162294

                           
Query: 290    gcctgaattccgg 302
              ||||||| |||||
Sbjct: 162293 gcctgaactccgg 162281



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                          
Query: 357    agggtacagacccttgagcgcaggatcgaccatcctgtccaacgcatcgatgtcgtggag 416
              ||||||||| |||| ||| ||||| |||||||||  |||||| || ||||||||||| ||
Sbjct: 162088 agggtacagcccctggagtgcagggtcgaccatctggtccaaagcgtcgatgtcgtgcag 162029

                      
Query: 417    ctggggag 424
              ||||||||
Sbjct: 162028 ctggggag 162021
to top
>dbj|AP004309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0560B08
          Length = 128098

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                        
Query: 230  tcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacctccgacatcggtg 289
            |||||||||| || |||||||| || |||||||||  ||| || |||||||||||||| |
Sbjct: 6533 tcgtcatgttggctctctgcacaaggcggaccagcaactggacgacctccgacatcggcg 6474

                         
Query: 290  gcctgaattccgg 302
            ||||||| |||||
Sbjct: 6473 gcctgaactccgg 6461



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                        
Query: 357  agggtacagacccttgagcgcaggatcgaccatcctgtccaacgcatcgatgtcgtggag 416
            ||||||||| |||| ||| ||||| |||||||||  |||||| || ||||||||||| ||
Sbjct: 6268 agggtacagcccctggagtgcagggtcgaccatctggtccaaagcgtcgatgtcgtgcag 6209

                    
Query: 417  ctggggag 424
            ||||||||
Sbjct: 6208 ctggggag 6201
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>dbj|AP004308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0552F09
          Length = 134659

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                         
Query: 230   tcgtcatgttagccctctgcacgagacggaccagcgcctgcaccacctccgacatcggtg 289
             |||||||||| || |||||||| || |||||||||  ||| || |||||||||||||| |
Sbjct: 92980 tcgtcatgttggctctctgcacaaggcggaccagcaactggacgacctccgacatcggcg 92921

                          
Query: 290   gcctgaattccgg 302
             ||||||| |||||
Sbjct: 92920 gcctgaactccgg 92908



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                         
Query: 357   agggtacagacccttgagcgcaggatcgaccatcctgtccaacgcatcgatgtcgtggag 416
             ||||||||| |||| ||| ||||| |||||||||  |||||| || ||||||||||| ||
Sbjct: 92715 agggtacagcccctggagtgcagggtcgaccatctggtccaaagcgtcgatgtcgtgcag 92656

                     
Query: 417   ctggggag 424
             ||||||||
Sbjct: 92655 ctggggag 92648
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>gb|AC135796.25| Medicago truncatula clone mth2-28b18, complete sequence
          Length = 118959

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 331   tcggcgaatcgtgaaagagacttggcagggtaca 364
             ||||||||||| |||||||||||| |||||||||
Sbjct: 52829 tcggcgaatcgagaaagagacttgacagggtaca 52796
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>dbj|AP006733.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02K14, TM0918b,
             complete sequence
          Length = 41851

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                         
Query: 233   tcatgttagccctctgcacgagacggaccagcgcctgcaccacctccgacatcggtggcc 292
             |||||||||| | |||||| |  || ||||||||||| ||||| || ||||| ||||| |
Sbjct: 38113 tcatgttagctcgctgcactaatcgtaccagcgcctgaaccacttctgacatgggtggtc 38054

                           
Query: 293   tgaattccggctca 306
              |||||| ||||||
Sbjct: 38053 ggaattcgggctca 38040
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>ref|XM_463595.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 4884

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 99   gaagaaataaacgaataccat 119
            |||||||||||||||||||||
Sbjct: 1171 gaagaaataaacgaataccat 1191
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>gb|AC006267.1| Arabidopsis thaliana BAC F9M13 from chromosome IV near 21.5 cM,
             complete sequence
          Length = 101644

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 217   tcgagcattttcttcgtcatg 237
             |||||||||||||||||||||
Sbjct: 77696 tcgagcattttcttcgtcatg 77676
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>emb|AL161510.2|ATCHRIV22 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 22
          Length = 198131

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 217   tcgagcattttcttcgtcatg 237
             |||||||||||||||||||||
Sbjct: 51343 tcgagcattttcttcgtcatg 51363
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 99       gaagaaataaacgaataccat 119
                |||||||||||||||||||||
Sbjct: 39594775 gaagaaataaacgaataccat 39594755
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>emb|BX828431.1|CNS0A3VU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH89ZH03 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1909

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 217  tcgagcattttcttcgtcatg 237
            |||||||||||||||||||||
Sbjct: 1478 tcgagcattttcttcgtcatg 1458
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>emb|BX827626.1|CNS0A3N0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS87ZB03 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1910

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 217  tcgagcattttcttcgtcatg 237
            |||||||||||||||||||||
Sbjct: 1456 tcgagcattttcttcgtcatg 1436
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>dbj|AP003416.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0456E05
          Length = 173699

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 99    gaagaaataaacgaataccat 119
             |||||||||||||||||||||
Sbjct: 75731 gaagaaataaacgaataccat 75711
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>dbj|AK120075.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013008L07, full
            insert sequence
          Length = 5516

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 99   gaagaaataaacgaataccat 119
            |||||||||||||||||||||
Sbjct: 1858 gaagaaataaacgaataccat 1878
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>dbj|AK111551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050P20, full
            insert sequence
          Length = 2844

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 69/85 (81%)
 Strand = Plus / Minus

                                                                        
Query: 241  gccctctgcacgagacggaccagcgcctgcaccacctccgacatcggtggcctgaattcc 300
            ||||||||||| || || |||||   ||| || ||||| ||||||||||| | ||| |||
Sbjct: 2356 gccctctgcaccaggcgcaccagttgctggacaacctcggacatcggtggacggaactcc 2297

                                     
Query: 301  ggctcagcctggacacacaaggcaa 325
            || || | |||||||||||| ||||
Sbjct: 2296 ggttcgggctggacacacaatgcaa 2272
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>gb|AC022682.16| Mus musculus chromosome 13, clone RP23-476E21, complete sequence
          Length = 183905

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     gctaggcgctagaagaaata 107
              ||||||||||||||||||||
Sbjct: 146233 gctaggcgctagaagaaata 146252
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>gb|AC133653.4| Mus musculus BAC clone RP24-320J12 from chromosome 7, complete sequence
          Length = 144233

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 362   acagacccttgagcgcagga 381
             ||||||||||||||||||||
Sbjct: 58255 acagacccttgagcgcagga 58236
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>emb|CT009713.8| Mouse DNA sequence from clone RP23-151C6 on chromosome 13, complete
             sequence
          Length = 217752

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    gctaggcgctagaagaaata 107
             ||||||||||||||||||||
Sbjct: 35567 gctaggcgctagaagaaata 35586
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>emb|CR656745.2|CNS0F5PR Tetraodon nigroviridis full-length cDNA
          Length = 949

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 177 atcctggtcctggtcatcgc 196
           ||||||||||||||||||||
Sbjct: 168 atcctggtcctggtcatcgc 187
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>emb|CR656179.2|CNS0F5A1 Tetraodon nigroviridis full-length cDNA
          Length = 951

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 177 atcctggtcctggtcatcgc 196
           ||||||||||||||||||||
Sbjct: 177 atcctggtcctggtcatcgc 196
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>emb|CR654462.2|CNS0F3YC Tetraodon nigroviridis full-length cDNA
          Length = 935

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 177 atcctggtcctggtcatcgc 196
           ||||||||||||||||||||
Sbjct: 154 atcctggtcctggtcatcgc 173
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>emb|CR654459.2|CNS0F3Y9 Tetraodon nigroviridis full-length cDNA
          Length = 948

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 177 atcctggtcctggtcatcgc 196
           ||||||||||||||||||||
Sbjct: 168 atcctggtcctggtcatcgc 187
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>emb|CR648125.2|CNS0EZ2B Tetraodon nigroviridis full-length cDNA
          Length = 925

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 177 atcctggtcctggtcatcgc 196
           ||||||||||||||||||||
Sbjct: 154 atcctggtcctggtcatcgc 173
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>emb|CR644110.2|CNS0EVYS Tetraodon nigroviridis full-length cDNA
          Length = 714

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 177 atcctggtcctggtcatcgc 196
           ||||||||||||||||||||
Sbjct: 169 atcctggtcctggtcatcgc 188
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>emb|CR641782.2|CNS0EU64 Tetraodon nigroviridis full-length cDNA
          Length = 927

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 177 atcctggtcctggtcatcgc 196
           ||||||||||||||||||||
Sbjct: 154 atcctggtcctggtcatcgc 173
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>emb|CR640513.2|CNS0ET6V Tetraodon nigroviridis full-length cDNA
          Length = 878

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 177 atcctggtcctggtcatcgc 196
           ||||||||||||||||||||
Sbjct: 166 atcctggtcctggtcatcgc 185
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>emb|CR640289.2|CNS0ET0N Tetraodon nigroviridis full-length cDNA
          Length = 951

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 177 atcctggtcctggtcatcgc 196
           ||||||||||||||||||||
Sbjct: 180 atcctggtcctggtcatcgc 199
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>emb|CR637383.2|CNS0EQRX Tetraodon nigroviridis full-length cDNA
          Length = 934

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 177 atcctggtcctggtcatcgc 196
           ||||||||||||||||||||
Sbjct: 156 atcctggtcctggtcatcgc 175
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>emb|CR637350.2|CNS0EQR0 Tetraodon nigroviridis full-length cDNA
          Length = 670

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 177 atcctggtcctggtcatcgc 196
           ||||||||||||||||||||
Sbjct: 165 atcctggtcctggtcatcgc 184
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>emb|CR633760.2|CNS0ENZA Tetraodon nigroviridis full-length cDNA
          Length = 925

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 177 atcctggtcctggtcatcgc 196
           ||||||||||||||||||||
Sbjct: 154 atcctggtcctggtcatcgc 173
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>emb|Z93931.1|HS438G17 Human DNA sequence from clone RP3-438G17 on chromosome 6q22 Contains a
             high mobility group protein pseudogene, complete sequence
          Length = 148198

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    tagaagaaataaacgaatac 116
             ||||||||||||||||||||
Sbjct: 42167 tagaagaaataaacgaatac 42148
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>gb|AC158781.4| Mus musculus chromosome 7, clone RP23-264H19, complete sequence
          Length = 208419

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 362    acagacccttgagcgcagga 381
              ||||||||||||||||||||
Sbjct: 101045 acagacccttgagcgcagga 101026
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>emb|BX828170.1|CNS0A2FW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH5ZC06 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1905

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 217  tcgagcattttcttcgtcat 236
            ||||||||||||||||||||
Sbjct: 1459 tcgagcattttcttcgtcat 1440


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,619,116
Number of Sequences: 3902068
Number of extensions: 2619116
Number of successful extensions: 43490
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43292
Number of HSP's gapped (non-prelim): 192
length of query: 428
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 406
effective length of database: 17,147,199,772
effective search space: 6961763107432
effective search space used: 6961763107432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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