ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart09f06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|J01236.1|BLYAMYAA Barley alpha-amylase type A isozyme mRNA, c... 850 0.0
2gb|M17128.1|BLYAMY2 Barley (H.vulgare) alpha-amylase 2 mRNA, com... 850 0.0
3emb|Y11276.1|HVAA24AMY H.vulgare mRNA for alpha-amylase, clone aa24 337 2e-89
4emb|Y11277.1|HVAA40AMY H.vulgare mRNA for alph-amylase, clone aa40 323 3e-85
5emb|X05166.1|HVMY32B Barley gene for type A alpha-amylase (Amy32b) 293 3e-76
6gb|M15208.1|BLYAMYG Barley (type A) high pI isozyme of alpha-amy... 293 3e-76
7gb|DQ018998.1| Hordeum vulgare haplotype A alpha-amylase (Amy32b... 291 1e-75
8gb|M17127.1|BLYAMY2A Barley (H.vulgare) alpha-amylase 2 gene, co... 289 4e-75
9gb|DQ018997.1| Hordeum vulgare haplotype G alpha-amylase (Amy32b... 281 1e-72
10emb|AJ010728.1|AFA010728 Avena fatua alpha-Amy2A gene, exons 1-4 264 2e-67
11emb|AJ010729.1|AFA010729 Avena fatua alpha-Amy2D gene, exons 1-4 256 6e-65
12emb|X64619.1|OSAMYC2M O.sativa Amyc2 mRNA for alpha-amylase 125 1e-25
13dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
14dbj|AP004678.3| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
15dbj|AK101018.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 1e-25
16dbj|AK059671.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 1e-25
17gb|M74177.1|RICAMY2A Oryza sativa japonica alpha-amylase (amy2A)... 125 1e-25
18gb|L25805.1|MZEALAM Zea mays alpha-amylase mRNA, complete cds 56 1e-04
19gb|AC005248.1| Homo sapiens BAC clone GS1-83B20 from 7, complete... 42 1.6
20emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromo... 42 1.6
21gb|AC145931.4| Gallus gallus BAC clone CH261-32O1 from chromosom... 42 1.6
22gb|AC153630.1| Mus musculus 6 BAC RP23-289O16 (Roswell Park Canc... 40 6.2
23gb|AC159201.2| Mus musculus BAC clone RP23-340E6 from chromosome... 40 6.2
24ref|XM_482917.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.2
25ref|XM_507267.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 6.2
26gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 6.2
27gb|AC139884.8| Mus musculus chromosome 6, clone RP23-343E20, com... 40 6.2
28emb|AL591789.1|SME591789 Sinorhizobium meliloti 1021 complete ch... 40 6.2
29gb|AC130205.3| Mus musculus BAC clone RP24-430C1 from chromosome... 40 6.2
30emb|CR937051.2|RN394C12 Rattus norvegicus chromosome 1 BAC CH230... 40 6.2
31emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete ... 40 6.2
32dbj|AB229400.1| Aspergillus oryzae cDNA, contig sequence: AoEST6280 40 6.2
33gb|AC093418.2| Homo sapiens chromosome 3 clone RP11-1035L22, com... 40 6.2
34dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 40 6.2
35gb|AC093413.2| Homo sapiens chromosome 3 clone RP11-170K19, comp... 40 6.2
36gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 6.2
37gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.2
38ref|XM_394675.2| PREDICTED: Apis mellifera similar to Discoidin ... 40 6.2
39dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
40dbj|AP004399.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
41dbj|AP004457.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
42dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 6.2
43dbj|AK119761.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
44dbj|AK119561.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
45ref|XM_308342.2| Anopheles gambiae str. PEST ENSANGP00000019063 ... 40 6.2
46dbj|AK073487.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
47emb|AL591767.2|CNS07EGK Human chromosome 14 DNA sequence BAC R-8... 40 6.2
48gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.2
49gb|AC132363.3| Mus musculus BAC clone RP23-455N1 from 1, complet... 40 6.2
50gb|AC153867.3| Mus musculus 6 BAC RP23-400K22 (Roswell Park Canc... 40 6.2
51gb|AC153730.2| Mus musculus 6 BAC RP24-539M22 (Roswell Park Canc... 40 6.2
52gb|M59351.1|RICAMY3D Rice alpha-amylase (RAmy3D) gene, complete ... 40 6.2
53gb|M24287.1|RICAAMYB Rice alpha-amylase mRNA, complete cds, clon... 40 6.2 
>gb|J01236.1|BLYAMYAA Barley alpha-amylase type A isozyme mRNA, complete cds
          Length = 1588

 Score =  850 bits (429), Expect = 0.0
 Identities = 438/441 (99%)
 Strand = Plus / Minus

                                                                        
Query: 18   attaaacctcttcgtatcctcagtactttatttactacagtcgtgtgagcaattcgtata 77
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1588 attaaacctcttcgtatcctcagtactttatttactacagtcgtgtgagcaattcgtata 1529

                                                                        
Query: 78   gctcatcaattttgggtacaggtatacatagttaatcatatccgcgtgaataccagaagt 137
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1528 gctcatcaattttgggtacaggtatacatagttaatcatatccgcgtgaataccagaagt 1469

                                                                        
Query: 138  gaatcatgtacttcaggaaattcatgctcgatcgaatgacggatcagtgcagacttcagc 197
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1468 gaatcatgtacttcaggaaattcatgctcgatcgaatgacggatcagtgcagacttcagc 1409

                                                                        
Query: 198  tcccttgtagtgttgccgcggcaccgttcttctcccagacggcgtaatcgttgccgtgtg 257
            ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1408 tccgttgtagtgttgccgcggcaccgttcttctcccagacggcgtagtcgttgccgtgtg 1349

                                                                        
Query: 258  ccgaggtcacgaacccggccgggatcaccgccccgacgtcgtacctggacccgatcttca 317
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1348 ccgaggtcacgaacccggccgggatcaccgccccgacgtcgtacctggacccgatcttca 1289

                                                                        
Query: 318  ccaccaccttgccgtctatctcggcgacgtaagcatctccttcgtgcatgaggatcttca 377
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1288 ccaccaccttgccgtctatctcggcgacgtaggcatctccttcgtgcatgaggatcttca 1229

                                                                        
Query: 378  gagcgctcgtcgccgtgatgccgttgcgcttcctgatcgccaccagcgccgcgatctggt 437
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1228 gagcgctcgtcgccgtgatgccgttgcgcttcctgatcgccaccagcgccgcgatctggt 1169

                                 
Query: 438  ccttaaacccccagttgaaga 458
            |||||||||||||||||||||
Sbjct: 1168 ccttaaacccccagttgaaga 1148
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>gb|M17128.1|BLYAMY2 Barley (H.vulgare) alpha-amylase 2 mRNA, complete cds
          Length = 1588

 Score =  850 bits (429), Expect = 0.0
 Identities = 438/441 (99%)
 Strand = Plus / Minus

                                                                        
Query: 18   attaaacctcttcgtatcctcagtactttatttactacagtcgtgtgagcaattcgtata 77
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1588 attaaacctcttcgtatcctcagtactttatttactacagtcgtgtgagcaattcgtata 1529

                                                                        
Query: 78   gctcatcaattttgggtacaggtatacatagttaatcatatccgcgtgaataccagaagt 137
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1528 gctcatcaattttgggtacaggtatacatagttaatcatatccgcgtgaataccagaagt 1469

                                                                        
Query: 138  gaatcatgtacttcaggaaattcatgctcgatcgaatgacggatcagtgcagacttcagc 197
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1468 gaatcatgtacttcaggaaattcatgctcgatcgaatgacggatcagtgcagacttcagc 1409

                                                                        
Query: 198  tcccttgtagtgttgccgcggcaccgttcttctcccagacggcgtaatcgttgccgtgtg 257
            ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1408 tccgttgtagtgttgccgcggcaccgttcttctcccagacggcgtagtcgttgccgtgtg 1349

                                                                        
Query: 258  ccgaggtcacgaacccggccgggatcaccgccccgacgtcgtacctggacccgatcttca 317
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1348 ccgaggtcacgaacccggccgggatcaccgccccgacgtcgtacctggacccgatcttca 1289

                                                                        
Query: 318  ccaccaccttgccgtctatctcggcgacgtaagcatctccttcgtgcatgaggatcttca 377
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1288 ccaccaccttgccgtctatctcggcgacgtaggcatctccttcgtgcatgaggatcttca 1229

                                                                        
Query: 378  gagcgctcgtcgccgtgatgccgttgcgcttcctgatcgccaccagcgccgcgatctggt 437
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1228 gagcgctcgtcgccgtgatgccgttgcgcttcctgatcgccaccagcgccgcgatctggt 1169

                                 
Query: 438  ccttaaacccccagttgaaga 458
            |||||||||||||||||||||
Sbjct: 1168 ccttaaacccccagttgaaga 1148
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>emb|Y11276.1|HVAA24AMY H.vulgare mRNA for alpha-amylase, clone aa24
          Length = 1507

 Score =  337 bits (170), Expect = 2e-89
 Identities = 230/250 (92%)
 Strand = Plus / Minus

                                                                        
Query: 192  ttcagctcccttgtagtgttgccgcggcaccgttcttctcccagacggcgtaatcgttgc 251
            ||||||||| ||||||||| ||||| ||| || ||||||||||||||||||| || ||||
Sbjct: 1344 ttcagctccgttgtagtgtggccgccgcagcgatcttctcccagacggcgtagtccttgc 1285

                                                                        
Query: 252  cgtgtgccgaggtcacgaacccggccgggatcaccgccccgacgtcgtacctggacccga 311
            |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1284 cgtgcgccgaggtcacgaacccggccgggatcacagccccgacgtcgtacctggacccga 1225

                                                                        
Query: 312  tcttcaccaccaccttgccgtctatctcggcgacgtaagcatctccttcgtgcatgagga 371
            |||||||||||||||||| ||| ||||| ||||| || || ||||| |||||||||||||
Sbjct: 1224 tcttcaccaccaccttgctgtcgatctctgcgacatatgcgtctccgtcgtgcatgagga 1165

                                                                        
Query: 372  tcttcagagcgctcgtcgccgtgatgccgttgcgcttcctgatcgccaccagcgccgcga 431
            |||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 1164 tcttcagagcactcgtcgccgtgatgccgttgcgcttcctgatcgccacaagcgctgcga 1105

                      
Query: 432  tctggtcctt 441
            ||| ||||||
Sbjct: 1104 tctcgtcctt 1095



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 52/60 (86%), Gaps = 3/60 (5%)
 Strand = Plus / Minus

                                                                        
Query: 28   ttcgtatcctcagtactttatt---tactacagtcgtgtgagcaattcgtatagctcatc 84
            |||||||||||| |||||||||   || |||| |||||||||| ||||||| ||||||||
Sbjct: 1506 ttcgtatcctcaatactttatttagtagtacaatcgtgtgagccattcgtacagctcatc 1447
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>emb|Y11277.1|HVAA40AMY H.vulgare mRNA for alph-amylase, clone aa40
          Length = 1615

 Score =  323 bits (163), Expect = 3e-85
 Identities = 265/299 (88%)
 Strand = Plus / Minus

                                                                        
Query: 160  catgctcgatcgaatgacggatcagtgcagacttcagctcccttgtagtgttgccgcggc 219
            |||||||||| |||||  |||| |||| || |||||||||| ||||||||| ||||||||
Sbjct: 1383 catgctcgattgaatggtggatgagtggaggcttcagctccgttgtagtgtcgccgcggc 1324

                                                                        
Query: 220  accgttcttctcccagacggcgtaatcgttgccgtgtgccgaggtcacgaacccggccgg 279
            | || |||||||||| |||||||| || |||||||| ||||| ||  ||||||| |||||
Sbjct: 1323 agcggtcttctcccatacggcgtagtccttgccgtgcgccgacgttgcgaacccagccgg 1264

                                                                        
Query: 280  gatcaccgccccgacgtcgtacctggacccgatcttcaccaccaccttgccgtctatctc 339
            ||||||||||||||||||||| |||| |||||| |||||||||||||||||||| |||||
Sbjct: 1263 gatcaccgccccgacgtcgtatctggtcccgattttcaccaccaccttgccgtcgatctc 1204

                                                                        
Query: 340  ggcgacgtaagcatctccttcgtgcatgaggatcttcagagcgctcgtcgccgtgatgcc 399
             |||||||| || ||||||||||||||||||||||  || || |||||||||||||||||
Sbjct: 1203 cgcgacgtaggcgtctccttcgtgcatgaggatctcgagcgcactcgtcgccgtgatgcc 1144

                                                                       
Query: 400  gttgcgcttcctgatcgccaccagcgccgcgatctggtccttaaacccccagttgaaga 458
            ||| |||||||||||||||||||||||||||||||  ||||| ||||||||||| ||||
Sbjct: 1143 gtttcgcttcctgatcgccaccagcgccgcgatctcatccttgaacccccagttaaaga 1085



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                             
Query: 23   acctcttcgtatcctcagtactttatttactacagtcgtgtgagcaatt 71
            |||||||| ||||||||||| |||||||||| |||||||||||||||||
Sbjct: 1514 acctcttcatatcctcagtaatttatttactccagtcgtgtgagcaatt 1466
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>emb|X05166.1|HVMY32B Barley gene for type A alpha-amylase (Amy32b)
          Length = 2717

 Score =  293 bits (148), Expect = 3e-76
 Identities = 264/300 (88%), Gaps = 2/300 (0%)
 Strand = Plus / Minus

                                                                        
Query: 160  catgctcgatcgaatgacggatcagtgcagacttcagctcccttgtagtgttgccgcggc 219
            |||||||||| |||||  |||| |||| || |||||||||| ||||||||| ||||||||
Sbjct: 2484 catgctcgattgaatggtggatgagtggaggcttcagctccgttgtagtgtcgccgcggc 2425

                                                                        
Query: 220  accgttcttctcccagacggcgtaa-tcgttgccgtgtgccgaggtcacgaacccggccg 278
            | | | ||||||| | ||||||| | || |||||||| ||||| ||  ||||||| ||||
Sbjct: 2424 agc-tgcttctccgatacggcgttagtccttgccgtgcgccgacgttgcgaacccagccg 2366

                                                                        
Query: 279  ggatcaccgccccgacgtcgtacctggacccgatcttcaccaccaccttgccgtctatct 338
            ||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||
Sbjct: 2365 ggatcaccgccccgacgtcgtacctggtcccgattttcaccaccaccttgccgtcgatct 2306

                                                                        
Query: 339  cggcgacgtaagcatctccttcgtgcatgaggatcttcagagcgctcgtcgccgtgatgc 398
            | |||||||| || ||||||||||||||||||||||  || || ||||||||||||||||
Sbjct: 2305 ccgcgacgtaggcgtctccttcgtgcatgaggatctcgagcgcactcgtcgccgtgatgc 2246

                                                                        
Query: 399  cgttgcgcttcctgatcgccaccagcgccgcgatctggtccttaaacccccagttgaaga 458
            |||| |||||||||||||||||||||||||||||||  ||||| ||||||||||| ||||
Sbjct: 2245 cgtttcgcttcctgatcgccaccagcgccgcgatctcatccttgaacccccagttaaaga 2186



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                             
Query: 23   acctcttcgtatcctcagtactttatttactacagtcgtgtgagcaatt 71
            |||||||| ||||||||||| |||||||||| |||||||||||||||||
Sbjct: 2615 acctcttcatatcctcagtaatttatttactccagtcgtgtgagcaatt 2567
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>gb|M15208.1|BLYAMYG Barley (type A) high pI isozyme of alpha-amylase gene, complete cds
          Length = 2717

 Score =  293 bits (148), Expect = 3e-76
 Identities = 264/300 (88%), Gaps = 2/300 (0%)
 Strand = Plus / Minus

                                                                        
Query: 160  catgctcgatcgaatgacggatcagtgcagacttcagctcccttgtagtgttgccgcggc 219
            |||||||||| |||||  |||| |||| || |||||||||| ||||||||| ||||||||
Sbjct: 2484 catgctcgattgaatggtggatgagtggaggcttcagctccgttgtagtgtcgccgcggc 2425

                                                                        
Query: 220  accgttcttctcccagacggcgtaa-tcgttgccgtgtgccgaggtcacgaacccggccg 278
            | | | ||||||| | ||||||| | || |||||||| ||||| ||  ||||||| ||||
Sbjct: 2424 agc-tgcttctccgatacggcgttagtccttgccgtgcgccgacgttgcgaacccagccg 2366

                                                                        
Query: 279  ggatcaccgccccgacgtcgtacctggacccgatcttcaccaccaccttgccgtctatct 338
            ||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||
Sbjct: 2365 ggatcaccgccccgacgtcgtacctggtcccgattttcaccaccaccttgccgtcgatct 2306

                                                                        
Query: 339  cggcgacgtaagcatctccttcgtgcatgaggatcttcagagcgctcgtcgccgtgatgc 398
            | |||||||| || ||||||||||||||||||||||  || || ||||||||||||||||
Sbjct: 2305 ccgcgacgtaggcgtctccttcgtgcatgaggatctcgagcgcactcgtcgccgtgatgc 2246

                                                                        
Query: 399  cgttgcgcttcctgatcgccaccagcgccgcgatctggtccttaaacccccagttgaaga 458
            |||| |||||||||||||||||||||||||||||||  ||||| ||||||||||| ||||
Sbjct: 2245 cgtttcgcttcctgatcgccaccagcgccgcgatctcatccttgaacccccagttaaaga 2186



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                             
Query: 23   acctcttcgtatcctcagtactttatttactacagtcgtgtgagcaatt 71
            |||||||| ||||||||||| |||||||||| |||||||||||||||||
Sbjct: 2615 acctcttcatatcctcagtaatttatttactccagtcgtgtgagcaatt 2567
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>gb|DQ018998.1| Hordeum vulgare haplotype A alpha-amylase (Amy32b) gene, partial
           cds
          Length = 619

 Score =  291 bits (147), Expect = 1e-75
 Identities = 222/247 (89%)
 Strand = Plus / Minus

                                                                       
Query: 212 gccgcggcaccgttcttctcccagacggcgtaatcgttgccgtgtgccgaggtcacgaac 271
           ||||||||| || |||||||||| |||||||| || |||||||| ||||| ||  |||||
Sbjct: 618 gccgcggcagcggtcttctcccatacggcgtagtccttgccgtgcgccgacgttgcgaac 559

                                                                       
Query: 272 ccggccgggatcaccgccccgacgtcgtacctggacccgatcttcaccaccaccttgccg 331
           || |||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||
Sbjct: 558 ccagccgggatcaccgccccgacgtcgtatctggtcccgattttcaccaccaccttgccg 499

                                                                       
Query: 332 tctatctcggcgacgtaagcatctccttcgtgcatgaggatcttcagagcgctcgtcgcc 391
           || ||||| |||||||| || ||||||||||||||||||||||| || || |||||||||
Sbjct: 498 tcgatctccgcgacgtaggcgtctccttcgtgcatgaggatcttgagcgcactcgtcgcc 439

                                                                       
Query: 392 gtgatgccgttgcgcttcctgatcgccaccagcgccgcgatctggtccttaaacccccag 451
           ||||||||||| |||||||||||||||||||||||||||||||  ||||| |||||||||
Sbjct: 438 gtgatgccgtttcgcttcctgatcgccaccagcgccgcgatctcatccttgaacccccag 379

                  
Query: 452 ttgaaga 458
           || ||||
Sbjct: 378 ttaaaga 372
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>gb|M17127.1|BLYAMY2A Barley (H.vulgare) alpha-amylase 2 gene, complete cds
          Length = 2337

 Score =  289 bits (146), Expect = 4e-75
 Identities = 224/250 (89%)
 Strand = Plus / Minus

                                                                        
Query: 192  ttcagctcccttgtagtgttgccgcggcaccgttcttctcccagacggcgtaatcgttgc 251
            ||||||||| |||||||||||   | ||| || ||||||||||||||||||| || ||||
Sbjct: 2044 ttcagctccgttgtagtgttggtcccgcagcgatcttctcccagacggcgtagtccttgc 1985

                                                                        
Query: 252  cgtgtgccgaggtcacgaacccggccgggatcaccgccccgacgtcgtacctggacccga 311
            |||  |||||||||||||||| |||||||||||| |||||||  ||||||||||||||||
Sbjct: 1984 cgttcgccgaggtcacgaaccgggccgggatcacagccccgagctcgtacctggacccga 1925

                                                                        
Query: 312  tcttcaccaccaccttgccgtctatctcggcgacgtaagcatctccttcgtgcatgagga 371
            |||||||||||||||||| ||| ||||| ||||| || || ||||| |||||||||||||
Sbjct: 1924 tcttcaccaccaccttgctgtcgatctctgcgacatatgcgtctccgtcgtgcatgagga 1865

                                                                        
Query: 372  tcttcagagcgctcgtcgccgtgatgccgttgcgcttcctgatcgccaccagcgccgcga 431
            |||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 1864 tcttcagagcactcgtcgccgtgatgccgttgcgcttcctgatcgccacaagcgctgcga 1805

                      
Query: 432  tctggtcctt 441
            ||| ||||||
Sbjct: 1804 tctcgtcctt 1795



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 57/65 (87%), Gaps = 3/65 (4%)
 Strand = Plus / Minus

                                                                        
Query: 23   acctcttcgtatcctcagtactttatt---tactacagtcgtgtgagcaattcgtatagc 79
            ||||||||||||||||| |||||||||   || |||| |||||||||| ||||||| |||
Sbjct: 2211 acctcttcgtatcctcaatactttatttagtagtacaatcgtgtgagccattcgtacagc 2152

                 
Query: 80   tcatc 84
            |||||
Sbjct: 2151 tcatc 2147
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>gb|DQ018997.1| Hordeum vulgare haplotype G alpha-amylase (Amy32b) gene, partial
           cds
          Length = 616

 Score =  281 bits (142), Expect = 1e-72
 Identities = 220/246 (89%)
 Strand = Plus / Minus

                                                                       
Query: 213 ccgcggcaccgttcttctcccagacggcgtaatcgttgccgtgtgccgaggtcacgaacc 272
           |||||||| || |||||||||| |||||||| || |||||||| ||||| ||  ||||||
Sbjct: 616 ccgcggcagcggtcttctcccatacggcgtagtccttgccgtgcgccgacgttgcgaacc 557

                                                                       
Query: 273 cggccgggatcaccgccccgacgtcgtacctggacccgatcttcaccaccaccttgccgt 332
           | |||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||
Sbjct: 556 cagccgggatcaccgccccgacgtcgtatctggtcccgattttcaccaccaccttgccgt 497

                                                                       
Query: 333 ctatctcggcgacgtaagcatctccttcgtgcatgaggatcttcagagcgctcgtcgccg 392
           | ||||| |||||||| || ||||||||||||||||||||||  || || ||||||||||
Sbjct: 496 cgatctccgcgacgtaggcgtctccttcgtgcatgaggatctcgagcgcactcgtcgccg 437

                                                                       
Query: 393 tgatgccgttgcgcttcctgatcgccaccagcgccgcgatctggtccttaaacccccagt 452
           |||||||||| |||||||||||||||||||||||||||||||  ||||| ||||||||||
Sbjct: 436 tgatgccgtttcgcttcctgatcgccaccagcgccgcgatctcatccttgaacccccagt 377

                 
Query: 453 tgaaga 458
           | ||||
Sbjct: 376 taaaga 371
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>emb|AJ010728.1|AFA010728 Avena fatua alpha-Amy2A gene, exons 1-4
          Length = 3694

 Score =  264 bits (133), Expect = 2e-67
 Identities = 205/229 (89%)
 Strand = Plus / Minus

                                                                        
Query: 230  tcccagacggcgtaatcgttgccgtgtgccgaggtcacgaacccggccgggatcaccgcc 289
            |||||||||||||| ||| |||||||||| ||||| |||||||| |||||||| || | |
Sbjct: 3161 tcccagacggcgtagtcgctgccgtgtgcagaggtgacgaacccagccgggatgacggac 3102

                                                                        
Query: 290  ccgacgtcgtacctggacccgatcttcaccaccaccttgccgtctatctcggcgacgtaa 349
            ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| 
Sbjct: 3101 ccgacgtcgtacctggagccgatcttcaccaccaccttgccgtcgatctcggcgacgtag 3042

                                                                        
Query: 350  gcatctccttcgtgcatgaggatcttcagagcgctcgtcgccgtgatgccgttgcgcttc 409
            || || || ||||||||||||||||| ||  |||||||||| ||||||||||||||||||
Sbjct: 3041 gcgtcgccgtcgtgcatgaggatcttgagctcgctcgtcgctgtgatgccgttgcgcttc 2982

                                                             
Query: 410  ctgatcgccaccagcgccgcgatctggtccttaaacccccagttgaaga 458
            || | ||||||||||||||||||||  ||||| || |||||||||||||
Sbjct: 2981 ctcaccgccaccagcgccgcgatctcttccttgaatccccagttgaaga 2933
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>emb|AJ010729.1|AFA010729 Avena fatua alpha-Amy2D gene, exons 1-4
          Length = 2701

 Score =  256 bits (129), Expect = 6e-65
 Identities = 207/233 (88%)
 Strand = Plus / Minus

                                                                        
Query: 226  cttctcccagacggcgtaatcgttgccgtgtgccgaggtcacgaacccggccgggatcac 285
            |||||||||||||||||| ||| |||||||||| ||| |||||||||| || ||||||||
Sbjct: 2141 cttctcccagacggcgtagtcgctgccgtgtgcggagttcacgaacccagctgggatcac 2082

                                                                        
Query: 286  cgccccgacgtcgtacctggacccgatcttcaccaccaccttgccgtctatctcggcgac 345
              |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 2081 gtccccgacgtcgtacctggacccgatcttcaccaccaccttgccgtcaatctcggcaac 2022

                                                                        
Query: 346  gtaagcatctccttcgtgcatgaggatcttcagagcgctcgtcgccgtgatgccgttgcg 405
             || || || || ||||||||||||||||| ||  ||||||||| |||||||| ||||||
Sbjct: 2021 ataggcgtcgccgtcgtgcatgaggatcttgagctcgctcgtcgacgtgatgctgttgcg 1962

                                                                 
Query: 406  cttcctgatcgccaccagcgccgcgatctggtccttaaacccccagttgaaga 458
            |||||| | ||||||||||||||||||||  ||||| || |||||||||||||
Sbjct: 1961 cttcctcaccgccaccagcgccgcgatctcctccttgaatccccagttgaaga 1909



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 36   ctcagtactttatttactacagtcgtgtgagcaattcgtatagctcat 83
            ||||||| ||||||||||||||| |||||| ||||||||  |||||||
Sbjct: 2312 ctcagtaatttatttactacagtagtgtgaacaattcgttgagctcat 2265
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>emb|X64619.1|OSAMYC2M O.sativa Amyc2 mRNA for alpha-amylase
          Length = 1659

 Score =  125 bits (63), Expect = 1e-25
 Identities = 135/159 (84%)
 Strand = Plus / Minus

                                                                        
Query: 292  gacgtcgtacctggacccgatcttcaccaccaccttgccgtctatctcggcgacgtaagc 351
            ||||||||| | ||| |||||||||| ||||||||||||||| |||||||||||||| ||
Sbjct: 1304 gacgtcgtagcgggagccgatcttcatcaccaccttgccgtcgatctcggcgacgtaggc 1245

                                                                        
Query: 352  atctccttcgtgcatgaggatcttcagagcgctcgtcgccgtgatgccgttgcgcttcct 411
             ||  | |||||||  | |||||| || | |||||||||||| | |||||| |||| |||
Sbjct: 1244 gtcggcgtcgtgcagcatgatcttgagcgagctcgtcgccgtcacgccgttccgctgcct 1185

                                                   
Query: 412  gatcgccaccagcgccgcgatctggtccttaaaccccca 450
             | ||||||||||||||||||||| ||||| ||||||||
Sbjct: 1184 caccgccaccagcgccgcgatctgctcctttaaccccca 1146
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  125 bits (63), Expect = 1e-25
 Identities = 135/159 (84%)
 Strand = Plus / Minus

                                                                            
Query: 292      gacgtcgtacctggacccgatcttcaccaccaccttgccgtctatctcggcgacgtaagc 351
                ||||||||| | ||| |||||||||| ||||||||||||||| |||||||||||||| ||
Sbjct: 29750554 gacgtcgtagcgggagccgatcttcatcaccaccttgccgtcgatctcggcgacgtaggc 29750495

                                                                            
Query: 352      atctccttcgtgcatgaggatcttcagagcgctcgtcgccgtgatgccgttgcgcttcct 411
                 ||  | |||||||  | |||||| || | |||||||||||| | |||||| |||| |||
Sbjct: 29750494 gtcggcgtcgtgcagcatgatcttgagcgagctcgtcgccgtcacgccgttccgctgcct 29750435

                                                       
Query: 412      gatcgccaccagcgccgcgatctggtccttaaaccccca 450
                 | ||||||||||||||||||||| ||||| ||||||||
Sbjct: 29750434 caccgccaccagcgccgcgatctgctcctttaaccccca 29750396



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 227      ttctcccagacggcgtaatcgttgccgtg 255
                |||||||||||||||||  ||||||||||
Sbjct: 29750619 ttctcccagacggcgtagccgttgccgtg 29750591
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>dbj|AP004678.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1136_F03
          Length = 110783

 Score =  125 bits (63), Expect = 1e-25
 Identities = 135/159 (84%)
 Strand = Plus / Minus

                                                                         
Query: 292   gacgtcgtacctggacccgatcttcaccaccaccttgccgtctatctcggcgacgtaagc 351
             ||||||||| | ||| |||||||||| ||||||||||||||| |||||||||||||| ||
Sbjct: 48684 gacgtcgtagcgggagccgatcttcatcaccaccttgccgtcgatctcggcgacgtaggc 48625

                                                                         
Query: 352   atctccttcgtgcatgaggatcttcagagcgctcgtcgccgtgatgccgttgcgcttcct 411
              ||  | |||||||  | |||||| || | |||||||||||| | |||||| |||| |||
Sbjct: 48624 gtcggcgtcgtgcagcatgatcttgagcgagctcgtcgccgtcacgccgttccgctgcct 48565

                                                    
Query: 412   gatcgccaccagcgccgcgatctggtccttaaaccccca 450
              | ||||||||||||||||||||| ||||| ||||||||
Sbjct: 48564 caccgccaccagcgccgcgatctgctcctttaaccccca 48526



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 227   ttctcccagacggcgtaatcgttgccgtg 255
             |||||||||||||||||  ||||||||||
Sbjct: 48749 ttctcccagacggcgtagccgttgccgtg 48721
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>dbj|AK101018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149I23, full
            insert sequence
          Length = 1712

 Score =  125 bits (63), Expect = 1e-25
 Identities = 135/159 (84%)
 Strand = Plus / Minus

                                                                        
Query: 292  gacgtcgtacctggacccgatcttcaccaccaccttgccgtctatctcggcgacgtaagc 351
            ||||||||| | ||| |||||||||| ||||||||||||||| |||||||||||||| ||
Sbjct: 1333 gacgtcgtagcgggagccgatcttcatcaccaccttgccgtcgatctcggcgacgtaggc 1274

                                                                        
Query: 352  atctccttcgtgcatgaggatcttcagagcgctcgtcgccgtgatgccgttgcgcttcct 411
             ||  | |||||||  | |||||| || | |||||||||||| | |||||| |||| |||
Sbjct: 1273 gtcggcgtcgtgcagcatgatcttgagcgagctcgtcgccgtcacgccgttccgctgcct 1214

                                                   
Query: 412  gatcgccaccagcgccgcgatctggtccttaaaccccca 450
             | ||||||||||||||||||||| ||||| ||||||||
Sbjct: 1213 caccgccaccagcgccgcgatctgctcctttaaccccca 1175



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 227  ttctcccagacggcgtaatcgttgccgtg 255
            |||||||||||||||||  ||||||||||
Sbjct: 1398 ttctcccagacggcgtagccgttgccgtg 1370
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>dbj|AK059671.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-F08, full
            insert sequence
          Length = 1718

 Score =  125 bits (63), Expect = 1e-25
 Identities = 135/159 (84%)
 Strand = Plus / Minus

                                                                        
Query: 292  gacgtcgtacctggacccgatcttcaccaccaccttgccgtctatctcggcgacgtaagc 351
            ||||||||| | ||| |||||||||| ||||||||||||||| |||||||||||||| ||
Sbjct: 1332 gacgtcgtagcgggagccgatcttcatcaccaccttgccgtcgatctcggcgacgtaggc 1273

                                                                        
Query: 352  atctccttcgtgcatgaggatcttcagagcgctcgtcgccgtgatgccgttgcgcttcct 411
             ||  | |||||||  | |||||| || | |||||||||||| | |||||| |||| |||
Sbjct: 1272 gtcggcgtcgtgcagcatgatcttgagcgagctcgtcgccgtcacgccgttccgctgcct 1213

                                                   
Query: 412  gatcgccaccagcgccgcgatctggtccttaaaccccca 450
             | ||||||||||||||||||||| ||||| ||||||||
Sbjct: 1212 caccgccaccagcgccgcgatctgctcctttaaccccca 1174



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 227  ttctcccagacggcgtaatcgttgccgtg 255
            |||||||||||||||||  ||||||||||
Sbjct: 1397 ttctcccagacggcgtagccgttgccgtg 1369
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>gb|M74177.1|RICAMY2A Oryza sativa japonica alpha-amylase (amy2A) gene, complete cds
          Length = 4128

 Score =  125 bits (63), Expect = 1e-25
 Identities = 135/159 (84%)
 Strand = Plus / Minus

                                                                        
Query: 292  gacgtcgtacctggacccgatcttcaccaccaccttgccgtctatctcggcgacgtaagc 351
            ||||||||| | ||| |||||||||| ||||||||||||||| |||||||||||||| ||
Sbjct: 3923 gacgtcgtagcgggagccgatcttcatcaccaccttgccgtcgatctcggcgacgtaggc 3864

                                                                        
Query: 352  atctccttcgtgcatgaggatcttcagagcgctcgtcgccgtgatgccgttgcgcttcct 411
             ||  | |||||||  | |||||| || | |||||||||||| | |||||| |||| |||
Sbjct: 3863 gtcggcgtcgtgcagcatgatcttgagcgagctcgtcgccgtcacgccgttccgctgcct 3804

                                                   
Query: 412  gatcgccaccagcgccgcgatctggtccttaaaccccca 450
             | ||||||||||||||||||||| ||||| ||||||||
Sbjct: 3803 caccgccaccagcgccgcgatctgctcctttaaccccca 3765



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 227  ttctcccagacggcgtaatcgttgccgtg 255
            |||||||||||||||||  ||||||||||
Sbjct: 3988 ttctcccagacggcgtagccgttgccgtg 3960
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>gb|L25805.1|MZEALAM Zea mays alpha-amylase mRNA, complete cds
          Length = 1627

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                        
Query: 289  cccgacgtcgtacctggacccgatcttcaccaccaccttgccgtctatctcggcgacgta 348
            ||||||||||||||  |||||||||||||| |  |||||| |||| |||| |||||||||
Sbjct: 1266 cccgacgtcgtaccgtgacccgatcttcacgatgaccttgtcgtcaatcttggcgacgta 1207
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>gb|AC005248.1| Homo sapiens BAC clone GS1-83B20 from 7, complete sequence
          Length = 68464

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 3     gacaaactcgaatttattaaa 23
             |||||||||||||||||||||
Sbjct: 12582 gacaaactcgaatttattaaa 12562
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>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib
          Length = 2013089

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 140     atcatgtacttcaggaaattc 160
               |||||||||||||||||||||
Sbjct: 1823067 atcatgtacttcaggaaattc 1823047
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>gb|AC145931.4| Gallus gallus BAC clone CH261-32O1 from chromosome unknown, complete
             sequence
          Length = 202356

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Plus

                                          
Query: 19    ttaaacctcttcgtatcctcagtacttta 47
             |||||||||||| ||||||||||||||||
Sbjct: 78612 ttaaacctcttc-tatcctcagtacttta 78639
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>gb|AC153630.1| Mus musculus 6 BAC RP23-289O16 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 217496

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   ctcccttgtagtgttgccgc 216
             ||||||||||||||||||||
Sbjct: 33371 ctcccttgtagtgttgccgc 33390
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>gb|AC159201.2| Mus musculus BAC clone RP23-340E6 from chromosome 13, complete sequence
          Length = 187967

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 302    ctggacccgatcttcaccac 321
              ||||||||||||||||||||
Sbjct: 114895 ctggacccgatcttcaccac 114876
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>ref|XM_482917.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1732

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 293  acgtcgtacctggacccgatcttcacca 320
            ||||||||||| | ||||||||||||||
Sbjct: 1301 acgtcgtacctcgtcccgatcttcacca 1274
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>ref|XM_507267.1| PREDICTED Oryza sativa (japonica cultivar-group), P0013B04.36 mRNA
          Length = 1774

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 293  acgtcgtacctggacccgatcttcacca 320
            ||||||||||| | ||||||||||||||
Sbjct: 1369 acgtcgtacctcgtcccgatcttcacca 1342
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 410     ctgatcgccaccagcgccgc 429
               ||||||||||||||||||||
Sbjct: 6312277 ctgatcgccaccagcgccgc 6312296
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>gb|AC139884.8| Mus musculus chromosome 6, clone RP23-343E20, complete sequence
          Length = 227769

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    aatcatgtacttcaggaaat 158
              ||||||||||||||||||||
Sbjct: 207759 aatcatgtacttcaggaaat 207778
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>emb|AL591789.1|SME591789 Sinorhizobium meliloti 1021 complete chromosome; segment 8/12
          Length = 294800

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 419    accagcgccgcgatctggtc 438
              ||||||||||||||||||||
Sbjct: 200972 accagcgccgcgatctggtc 200991
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>gb|AC130205.3| Mus musculus BAC clone RP24-430C1 from chromosome 1, complete sequence
          Length = 165927

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   catgtacttcaggaaattca 161
             ||||||||||||||||||||
Sbjct: 13053 catgtacttcaggaaattca 13034
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>emb|CR937051.2|RN394C12 Rattus norvegicus chromosome 1 BAC CH230-394C12, complete sequence
          Length = 130117

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    ttttgggtacaggtatacat 106
             ||||||||||||||||||||
Sbjct: 35915 ttttgggtacaggtatacat 35934
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>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29
          Length = 295150

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 412    gatcgccaccagcgccgcga 431
              ||||||||||||||||||||
Sbjct: 118483 gatcgccaccagcgccgcga 118464
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>dbj|AB229400.1| Aspergillus oryzae cDNA, contig sequence: AoEST6280
          Length = 493

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 125 gaataccagaagtgaatcatgtac 148
           |||||||| |||||||||||||||
Sbjct: 373 gaataccacaagtgaatcatgtac 396
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>gb|AC093418.2| Homo sapiens chromosome 3 clone RP11-1035L22, complete sequence
          Length = 206320

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   tgtacttcaggaaattcatg 163
             ||||||||||||||||||||
Sbjct: 32070 tgtacttcaggaaattcatg 32089
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>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113
          Length = 1841713

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 125    gaataccagaagtgaatcatgtac 148
              |||||||| |||||||||||||||
Sbjct: 841925 gaataccacaagtgaatcatgtac 841948
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>gb|AC093413.2| Homo sapiens chromosome 3 clone RP11-170K19, complete sequence
          Length = 175699

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    tgtacttcaggaaattcatg 163
              ||||||||||||||||||||
Sbjct: 121094 tgtacttcaggaaattcatg 121075
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 420     ccagcgccgcgatctggtcc 439
               ||||||||||||||||||||
Sbjct: 1642137 ccagcgccgcgatctggtcc 1642156
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 411     tgatcgccaccagcgccgcg 430
               ||||||||||||||||||||
Sbjct: 4983973 tgatcgccaccagcgccgcg 4983954



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 418     caccagcgccgcgatctggt 437
               ||||||||||||||||||||
Sbjct: 1901610 caccagcgccgcgatctggt 1901591
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>ref|XM_394675.2| PREDICTED: Apis mellifera similar to Discoidin domain receptor 2
            precursor (Receptor protein-tyrosine kinase TKT)
            (Tyrosine-protein kinase TYRO 10) (Neurotrophic tyrosine
            kinase, receptor-related 3) (LOC411201), partial mRNA
          Length = 2779

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 213  ccgcggcaccgttcttctcc 232
            ||||||||||||||||||||
Sbjct: 1277 ccgcggcaccgttcttctcc 1258
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 293      acgtcgtacctggacccgatcttcacca 320
                ||||||||||| | ||||||||||||||
Sbjct: 23335627 acgtcgtacctcgtcccgatcttcacca 23335600
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>dbj|AP004399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0451G12
          Length = 142182

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 293   acgtcgtacctggacccgatcttcacca 320
             ||||||||||| | ||||||||||||||
Sbjct: 17464 acgtcgtacctcgtcccgatcttcacca 17437
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>dbj|AP004457.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0013B04
          Length = 141319

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 293    acgtcgtacctggacccgatcttcacca 320
              ||||||||||| | ||||||||||||||
Sbjct: 134978 acgtcgtacctcgtcccgatcttcacca 134951
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 415     cgccaccagcgccgcgatct 434
               ||||||||||||||||||||
Sbjct: 1606852 cgccaccagcgccgcgatct 1606871
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>dbj|AK119761.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-G03, full
            insert sequence
          Length = 1732

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 293  acgtcgtacctggacccgatcttcacca 320
            ||||||||||| | ||||||||||||||
Sbjct: 1301 acgtcgtacctcgtcccgatcttcacca 1274
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>dbj|AK119561.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-B09, full
            insert sequence
          Length = 1760

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 293  acgtcgtacctggacccgatcttcacca 320
            ||||||||||| | ||||||||||||||
Sbjct: 1388 acgtcgtacctcgtcccgatcttcacca 1361
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>ref|XM_308342.2| Anopheles gambiae str. PEST ENSANGP00000019063
           (ENSANGG00000016574), partial mRNA
          Length = 1371

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 389 gccgtgatgccgttgcgctt 408
           ||||||||||||||||||||
Sbjct: 815 gccgtgatgccgttgcgctt 796
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>dbj|AK073487.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041J03, full
            insert sequence
          Length = 1774

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 293  acgtcgtacctggacccgatcttcacca 320
            ||||||||||| | ||||||||||||||
Sbjct: 1369 acgtcgtacctcgtcccgatcttcacca 1342
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>emb|AL591767.2|CNS07EGK Human chromosome 14 DNA sequence BAC R-831F12 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 189410

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    atcctcagtactttatttac 52
             ||||||||||||||||||||
Sbjct: 61839 atcctcagtactttatttac 61858
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 421     cagcgccgcgatctggtcct 440
               ||||||||||||||||||||
Sbjct: 1343093 cagcgccgcgatctggtcct 1343074
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>gb|AC132363.3| Mus musculus BAC clone RP23-455N1 from 1, complete sequence
          Length = 180858

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 142  catgtacttcaggaaattca 161
            ||||||||||||||||||||
Sbjct: 2649 catgtacttcaggaaattca 2668
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>gb|AC153867.3| Mus musculus 6 BAC RP23-400K22 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse6 BAC Library) complete sequence
          Length = 196838

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   ctcccttgtagtgttgccgc 216
             ||||||||||||||||||||
Sbjct: 87063 ctcccttgtagtgttgccgc 87082
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>gb|AC153730.2| Mus musculus 6 BAC RP24-539M22 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 151428

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   aatcatgtacttcaggaaat 158
             ||||||||||||||||||||
Sbjct: 54594 aatcatgtacttcaggaaat 54613
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>gb|M59351.1|RICAMY3D Rice alpha-amylase (RAmy3D) gene, complete cds, clone lambda-OSg1A
          Length = 2938

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 293  acgtcgtacctggacccgatcttcacca 320
            ||||||||||| | ||||||||||||||
Sbjct: 2497 acgtcgtacctcgtcccgatcttcacca 2470
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>gb|M24287.1|RICAAMYB Rice alpha-amylase mRNA, complete cds, clone pOS137
          Length = 1682

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 293  acgtcgtacctggacccgatcttcacca 320
            ||||||||||| | ||||||||||||||
Sbjct: 1279 acgtcgtacctcgtcccgatcttcacca 1252


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,837,393
Number of Sequences: 3902068
Number of extensions: 2837393
Number of successful extensions: 53142
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 52588
Number of HSP's gapped (non-prelim): 554
length of query: 458
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 436
effective length of database: 17,147,199,772
effective search space: 7476179100592
effective search space used: 7476179100592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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