ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart09f04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT016269.1| Zea mays clone Contig102 mRNA sequence 186 4e-44
2gb|AY103919.1| Zea mays PCO099246 mRNA sequence 186 4e-44
3gb|BT017990.1| Zea mays clone EL01N0526B03.c mRNA sequence 178 1e-41
4gb|BT016705.1| Zea mays clone Contig538 mRNA sequence 172 6e-40
5ref|XM_475866.1| Oryza sativa (japonica cultivar-group), predic... 161 2e-36
6dbj|AK121567.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 2e-36
7dbj|AK065272.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 2e-36
8dbj|AK062179.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 2e-36
9ref|NM_192099.1| Oryza sativa (japonica cultivar-group), predic... 145 1e-31
10dbj|AK121587.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 1e-31
11dbj|AK098893.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 1e-31
12dbj|AK060428.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 1e-31
13dbj|D38231.1|RICGPBSLP Oryza sativa (japonica cultivar-group) RW... 145 1e-31
14dbj|AK098877.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 3e-29
15gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome... 84 4e-13
16gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome... 84 4e-13
17dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
18dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
19dbj|AP003452.3| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
20dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
21ref|NM_101670.2| Arabidopsis thaliana ATARCA; nucleotide binding... 62 2e-06
22gb|AY063016.1| Arabidopsis thaliana putative WD-40 repeat protei... 62 2e-06
23gb|AY035007.1| Arabidopsis thaliana putative WD-40 repeat protei... 62 2e-06
24emb|BX816078.1|CNS0ABTL Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
25emb|BX814524.1|CNS0AC6T Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
26emb|BX816944.1|CNS0ABM9 Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
27emb|BX815413.1|CNS0ABK1 Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
28emb|BX815215.1|CNS0ABGT Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
29emb|BX815043.1|CNS0ABBL Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
30gb|AY088480.1| Arabidopsis thaliana clone 7026 mRNA, complete se... 62 2e-06
31gb|AC034107.5|T10F20 Sequence of BAC T10F20 from Arabidopsis tha... 62 2e-06
32gb|AC069551.4|AC069551 Genomic sequence for Arabidopsis thaliana... 62 2e-06
33gb|U77381.1|ATU77381 Arabidopsis thaliana WD-40 repeat protein (... 62 2e-06
34emb|BX815631.1|CNS0ABFU Arabidopsis thaliana Full-length cDNA Co... 54 4e-04
35emb|BX814194.1|CNS0AC6D Arabidopsis thaliana Full-length cDNA Co... 54 4e-04
36ref|XM_501306.1| Yarrowia lipolytica CLIB122, YALI0C00913g predi... 44 0.36
37emb|BX816233.1|CNS0ABX9 Arabidopsis thaliana Full-length cDNA Co... 44 0.36
38dbj|AK108888.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.36
39emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 44 0.36
40emb|X53574.1|CRGPLP C. reinhardtii Cblp gene for a G protein bet... 42 1.4
41gb|DQ122897.1| Chlamydomonas incerta G protein beta subunit-like... 42 1.4
42gb|AC011037.8| Homo sapiens chromosome 8, clone RP11-7F18, compl... 42 1.4
43gb|AY393848.1| Gallus gallus guanine nucleotide-binding protein ... 40 5.7
44gb|AC153919.8| Mus musculus 10 BAC RP23-91E23 (Roswell Park Canc... 40 5.7
45gb|AC131706.4| Mus musculus BAC clone RP24-136E12 from chromosom... 40 5.7
46gb|AC159474.9| Mus musculus 10 BAC RP23-28P17 (Roswell Park Canc... 40 5.7
47emb|AL365335.11| Human DNA sequence from clone RP11-278E14 on ch... 40 5.7
48gb|AC099573.15| Mus musculus chromosome 7, clone RP23-28E6, comp... 40 5.7
49gb|AC113054.14| Mus musculus chromosome 15, clone RP23-251L21, c... 40 5.7
50emb|BX255878.13| Mouse DNA sequence from clone RP23-444O21 on ch... 40 5.7
51emb|AL590503.11| Mouse DNA sequence from clone RP23-128M23 on ch... 40 5.7
52ref|NM_001004378.1| Gallus gallus guanine nucleotide binding pro... 40 5.7
53emb|CR386189.1| Gallus gallus finished cDNA, clone ChEST9g24 40 5.7
54gb|M24193.1|CHKMHB123A Chicken MHC B complex protein (C12-3) mRN... 40 5.7
55emb|AL732623.7| Mouse DNA sequence from clone RP23-276F7 on chro... 40 5.7 
>gb|BT016269.1| Zea mays clone Contig102 mRNA sequence
          Length = 1254

 Score =  186 bits (94), Expect = 4e-44
 Identities = 139/154 (90%)
 Strand = Plus / Minus

                                                                        
Query: 254  agaccctgatagttccatcggtgtacccggtgtagagggtgcttccgtccgcgctccagc 313
            ||||||||||||  ||||||||||| || ||||||||||||||||| || ||||||||||
Sbjct: 1039 agaccctgatagacccatcggtgtagccagtgtagagggtgcttccatcggcgctccagc 980

                                                                        
Query: 314  tcaggcttgtgcagtacagcatctggttcttggagacctggacttcaggcttaaggtcct 373
            ||| ||||||||||||||| |||||||||||||||| |||||  |||||||| |||||||
Sbjct: 979  tcaagcttgtgcagtacaggatctggttcttggagatctggatgtcaggcttgaggtcct 920

                                              
Query: 374  gcacgacatgcttggactccaggtcccagatctt 407
            ||||||| ||||| ||||| ||||||||||||||
Sbjct: 919  gcacgacgtgcttcgactcaaggtcccagatctt 886
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>gb|AY103919.1| Zea mays PCO099246 mRNA sequence
          Length = 1461

 Score =  186 bits (94), Expect = 4e-44
 Identities = 139/154 (90%)
 Strand = Plus / Minus

                                                                        
Query: 254  agaccctgatagttccatcggtgtacccggtgtagagggtgcttccgtccgcgctccagc 313
            ||||||||||||  ||||||||||| || ||||||||||||||||| || ||||||||||
Sbjct: 1196 agaccctgatagacccatcggtgtagccagtgtagagggtgcttccatcggcgctccagc 1137

                                                                        
Query: 314  tcaggcttgtgcagtacagcatctggttcttggagacctggacttcaggcttaaggtcct 373
            ||| ||||||||||||||| |||||||||||||||| |||||  |||||||| |||||||
Sbjct: 1136 tcaagcttgtgcagtacaggatctggttcttggagatctggatgtcaggcttgaggtcct 1077

                                              
Query: 374  gcacgacatgcttggactccaggtcccagatctt 407
            ||||||| ||||| ||||| ||||||||||||||
Sbjct: 1076 gcacgacgtgcttcgactcaaggtcccagatctt 1043
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>gb|BT017990.1| Zea mays clone EL01N0526B03.c mRNA sequence
          Length = 1281

 Score =  178 bits (90), Expect = 1e-41
 Identities = 138/154 (89%)
 Strand = Plus / Minus

                                                                        
Query: 254  agaccctgatagttccatcggtgtacccggtgtagagggtgcttccgtccgcgctccagc 313
            ||||||||||||  ||||||||||| || |||||||||| |||||| || ||||||||||
Sbjct: 1048 agaccctgatagacccatcggtgtagccagtgtagagggggcttccatcggcgctccagc 989

                                                                        
Query: 314  tcaggcttgtgcagtacagcatctggttcttggagacctggacttcaggcttaaggtcct 373
            ||| ||||||||||||||| |||||||||||||||| |||||  |||||||| |||||||
Sbjct: 988  tcaagcttgtgcagtacaggatctggttcttggagatctggatgtcaggcttgaggtcct 929

                                              
Query: 374  gcacgacatgcttggactccaggtcccagatctt 407
            ||||||| ||||| ||||| ||||||||||||||
Sbjct: 928  gcacgacgtgcttcgactcaaggtcccagatctt 895
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>gb|BT016705.1| Zea mays clone Contig538 mRNA sequence
          Length = 1265

 Score =  172 bits (87), Expect = 6e-40
 Identities = 135/151 (89%)
 Strand = Plus / Minus

                                                                        
Query: 268  ccatcggtgtacccggtgtagagggtgcttccgtccgcgctccagctcaggcttgtgcag 327
            ||||||||||| || ||||||||||||||||||||||| |||||||||| |||||| |||
Sbjct: 1025 ccatcggtgtagccagtgtagagggtgcttccgtccgcactccagctcaagcttgtacag 966

                                                                        
Query: 328  tacagcatctggttcttggagacctggacttcaggcttaaggtcctgcacgacatgcttg 387
            ||||| ||||||||||||||||||||||  || ||||| ||||||||||| || ||||| 
Sbjct: 965  tacaggatctggttcttggagacctggatgtcgggcttgaggtcctgcacaacgtgcttc 906

                                           
Query: 388  gactccaggtcccagatcttgatagactcct 418
            ||||| |||||||||||||||| ||| ||||
Sbjct: 905  gactcgaggtcccagatcttgacagagtcct 875
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>ref|XM_475866.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1011

 Score =  161 bits (81), Expect = 2e-36
 Identities = 147/169 (86%)
 Strand = Plus / Minus

                                                                       
Query: 256 accctgatagttccatcggtgtacccggtgtagagggtgcttccgtccgcgctccagctc 315
           ||||||||||||||||| ||||| || | | |||||||||| || || ||||||||||||
Sbjct: 974 accctgatagttccatcagtgtagccagcgaagagggtgctgccatcagcgctccagctc 915

                                                                       
Query: 316 aggcttgtgcagtacagcatctggttcttggagacctggacttcaggcttaaggtcctgc 375
           |  ||||||||||||||||||||| ||||| || |||||||||| ||||| |||||||||
Sbjct: 914 aaacttgtgcagtacagcatctggctcttgaaggcctggacttctggcttgaggtcctgc 855

                                                            
Query: 376 acgacatgcttggactccaggtcccagatcttgatagactcctctgtcg 424
           | |||  |||||||||| ||||||||||||||||  || ||||||||||
Sbjct: 854 atgacgagcttggactcgaggtcccagatcttgacggagtcctctgtcg 806
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>dbj|AK121567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034P13, full
            insert sequence
          Length = 1385

 Score =  161 bits (81), Expect = 2e-36
 Identities = 147/169 (86%)
 Strand = Plus / Minus

                                                                        
Query: 256  accctgatagttccatcggtgtacccggtgtagagggtgcttccgtccgcgctccagctc 315
            ||||||||||||||||| ||||| || | | |||||||||| || || ||||||||||||
Sbjct: 1049 accctgatagttccatcagtgtagccagcgaagagggtgctgccatcagcgctccagctc 990

                                                                        
Query: 316  aggcttgtgcagtacagcatctggttcttggagacctggacttcaggcttaaggtcctgc 375
            |  ||||||||||||||||||||| ||||| || |||||||||| ||||| |||||||||
Sbjct: 989  aaacttgtgcagtacagcatctggctcttgaaggcctggacttctggcttgaggtcctgc 930

                                                             
Query: 376  acgacatgcttggactccaggtcccagatcttgatagactcctctgtcg 424
            | |||  |||||||||| ||||||||||||||||  || ||||||||||
Sbjct: 929  atgacgagcttggactcgaggtcccagatcttgacggagtcctctgtcg 881
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>dbj|AK065272.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002L07, full
            insert sequence
          Length = 1227

 Score =  161 bits (81), Expect = 2e-36
 Identities = 147/169 (86%)
 Strand = Plus / Minus

                                                                        
Query: 256  accctgatagttccatcggtgtacccggtgtagagggtgcttccgtccgcgctccagctc 315
            ||||||||||||||||| ||||| || | | |||||||||| || || ||||||||||||
Sbjct: 1042 accctgatagttccatcagtgtagccagcgaagagggtgctgccatcagcgctccagctc 983

                                                                        
Query: 316  aggcttgtgcagtacagcatctggttcttggagacctggacttcaggcttaaggtcctgc 375
            |  ||||||||||||||||||||| ||||| || |||||||||| ||||| |||||||||
Sbjct: 982  aaacttgtgcagtacagcatctggctcttgaaggcctggacttctggcttgaggtcctgc 923

                                                             
Query: 376  acgacatgcttggactccaggtcccagatcttgatagactcctctgtcg 424
            | |||  |||||||||| ||||||||||||||||  || ||||||||||
Sbjct: 922  atgacgagcttggactcgaggtcccagatcttgacggagtcctctgtcg 874
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>dbj|AK062179.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-D07, full
            insert sequence
          Length = 1412

 Score =  161 bits (81), Expect = 2e-36
 Identities = 147/169 (86%)
 Strand = Plus / Minus

                                                                        
Query: 256  accctgatagttccatcggtgtacccggtgtagagggtgcttccgtccgcgctccagctc 315
            ||||||||||||||||| ||||| || | | |||||||||| || || ||||||||||||
Sbjct: 1051 accctgatagttccatcagtgtagccagcgaagagggtgctgccatcagcgctccagctc 992

                                                                        
Query: 316  aggcttgtgcagtacagcatctggttcttggagacctggacttcaggcttaaggtcctgc 375
            |  ||||||||||||||||||||| ||||| || |||||||||| ||||| |||||||||
Sbjct: 991  aaacttgtgcagtacagcatctggctcttgaaggcctggacttctggcttgaggtcctgc 932

                                                             
Query: 376  acgacatgcttggactccaggtcccagatcttgatagactcctctgtcg 424
            | |||  |||||||||| ||||||||||||||||  || ||||||||||
Sbjct: 931  atgacgagcttggactcgaggtcccagatcttgacggagtcctctgtcg 883
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>ref|NM_192099.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1005

 Score =  145 bits (73), Expect = 1e-31
 Identities = 148/173 (85%)
 Strand = Plus / Minus

                                                                       
Query: 246 gatcttgaagaccctgatagttccatcggtgtacccggtgtagagggtgcttccgtccgc 305
           ||||||| ||| |||||| |||||||| ||||| || |  |||||||||||||| || ||
Sbjct: 981 gatcttgtagatcctgatggttccatctgtgtaaccagcatagagggtgcttccatctgc 922

                                                                       
Query: 306 gctccagctcaggcttgtgcagtacagcatctggttcttggagacctggacttcaggctt 365
           ||||||| ||| |||||||||||| ||||||||||||||||||||  |||  || |||||
Sbjct: 921 gctccagttcaagcttgtgcagtagagcatctggttcttggagacagggatctcgggctt 862

                                                                
Query: 366 aaggtcctgcacgacatgcttggactccaggtcccagatcttgatagactcct 418
           |||||||||||| |  ||||| ||||| || ||||||||||||||||| ||||
Sbjct: 861 aaggtcctgcacaatgtgctttgactcaagatcccagatcttgatagagtcct 809
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>dbj|AK121587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037K24, full
            insert sequence
          Length = 1358

 Score =  145 bits (73), Expect = 1e-31
 Identities = 148/173 (85%)
 Strand = Plus / Minus

                                                                        
Query: 246  gatcttgaagaccctgatagttccatcggtgtacccggtgtagagggtgcttccgtccgc 305
            ||||||| ||| |||||| |||||||| ||||| || |  |||||||||||||| || ||
Sbjct: 1079 gatcttgtagatcctgatggttccatctgtgtaaccagcatagagggtgcttccatctgc 1020

                                                                        
Query: 306  gctccagctcaggcttgtgcagtacagcatctggttcttggagacctggacttcaggctt 365
            ||||||| ||| |||||||||||| ||||||||||||||||||||  |||  || |||||
Sbjct: 1019 gctccagttcaagcttgtgcagtagagcatctggttcttggagacagggatctcgggctt 960

                                                                 
Query: 366  aaggtcctgcacgacatgcttggactccaggtcccagatcttgatagactcct 418
            |||||||||||| |  ||||| ||||| || ||||||||||||||||| ||||
Sbjct: 959  aaggtcctgcacaatgtgctttgactcaagatcccagatcttgatagagtcct 907
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>dbj|AK098893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001N15, full
            insert sequence
          Length = 1256

 Score =  145 bits (73), Expect = 1e-31
 Identities = 148/173 (85%)
 Strand = Plus / Minus

                                                                        
Query: 246  gatcttgaagaccctgatagttccatcggtgtacccggtgtagagggtgcttccgtccgc 305
            ||||||| ||| |||||| |||||||| ||||| || |  |||||||||||||| || ||
Sbjct: 1050 gatcttgtagatcctgatggttccatctgtgtaaccagcatagagggtgcttccatctgc 991

                                                                        
Query: 306  gctccagctcaggcttgtgcagtacagcatctggttcttggagacctggacttcaggctt 365
            ||||||| ||| |||||||||||| ||||||||||||||||||||  |||  || |||||
Sbjct: 990  gctccagttcaagcttgtgcagtagagcatctggttcttggagacagggatctcgggctt 931

                                                                 
Query: 366  aaggtcctgcacgacatgcttggactccaggtcccagatcttgatagactcct 418
            |||||||||||| |  ||||| ||||| || ||||||||||||||||| ||||
Sbjct: 930  aaggtcctgcacaatgtgctttgactcaagatcccagatcttgatagagtcct 878
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>dbj|AK060428.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-A02, full
            insert sequence
          Length = 1351

 Score =  145 bits (73), Expect = 1e-31
 Identities = 148/173 (85%)
 Strand = Plus / Minus

                                                                        
Query: 246  gatcttgaagaccctgatagttccatcggtgtacccggtgtagagggtgcttccgtccgc 305
            ||||||| ||| |||||| |||||||| ||||| || |  |||||||||||||| || ||
Sbjct: 1073 gatcttgtagatcctgatggttccatctgtgtaaccagcatagagggtgcttccatctgc 1014

                                                                        
Query: 306  gctccagctcaggcttgtgcagtacagcatctggttcttggagacctggacttcaggctt 365
            ||||||| ||| |||||||||||| ||||||||||||||||||||  |||  || |||||
Sbjct: 1013 gctccagttcaagcttgtgcagtagagcatctggttcttggagacagggatctcgggctt 954

                                                                 
Query: 366  aaggtcctgcacgacatgcttggactccaggtcccagatcttgatagactcct 418
            |||||||||||| |  ||||| ||||| || ||||||||||||||||| ||||
Sbjct: 953  aaggtcctgcacaatgtgctttgactcaagatcccagatcttgatagagtcct 901
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>dbj|D38231.1|RICGPBSLP Oryza sativa (japonica cultivar-group) RWD mRNA for q group of
            receptor for activated C-kinase, complete cds
          Length = 1285

 Score =  145 bits (73), Expect = 1e-31
 Identities = 148/173 (85%)
 Strand = Plus / Minus

                                                                        
Query: 246  gatcttgaagaccctgatagttccatcggtgtacccggtgtagagggtgcttccgtccgc 305
            ||||||| ||| |||||| |||||||| ||||| || |  |||||||||||||| || ||
Sbjct: 1007 gatcttgtagatcctgatggttccatctgtgtaaccagcatagagggtgcttccatctgc 948

                                                                        
Query: 306  gctccagctcaggcttgtgcagtacagcatctggttcttggagacctggacttcaggctt 365
            ||||||| ||| |||||||||||| ||||||||||||||||||||  |||  || |||||
Sbjct: 947  gctccagttcaagcttgtgcagtagagcatctggttcttggagacagggatctcgggctt 888

                                                                 
Query: 366  aaggtcctgcacgacatgcttggactccaggtcccagatcttgatagactcct 418
            |||||||||||| |  ||||| ||||| || ||||||||||||||||| ||||
Sbjct: 887  aaggtcctgcacaatgtgctttgactcaagatcccagatcttgatagagtcct 835
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>dbj|AK098877.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E12, full
            insert sequence
          Length = 1326

 Score =  137 bits (69), Expect = 3e-29
 Identities = 147/173 (84%)
 Strand = Plus / Minus

                                                                        
Query: 246  gatcttgaagaccctgatagttccatcggtgtacccggtgtagagggtgcttccgtccgc 305
            ||||||| ||| |||||| |||||||| ||||| || |  |||||||||||||| || ||
Sbjct: 1067 gatcttgtagatcctgatggttccatctgtgtaaccagcatagagggtgcttccatctgc 1008

                                                                        
Query: 306  gctccagctcaggcttgtgcagtacagcatctggttcttggagacctggacttcaggctt 365
            ||||||| ||| |||||||||||| ||||||||||||||||||||  |||  || |||||
Sbjct: 1007 gctccagttcaagcttgtgcagtagagcatctggttcttggagacagggatctcgggctt 948

                                                                 
Query: 366  aaggtcctgcacgacatgcttggactccaggtcccagatcttgatagactcct 418
            |||||||||||| |  ||||| ||||| ||  |||||||||||||||| ||||
Sbjct: 947  aaggtcctgcacaatgtgctttgactcaagaccccagatcttgatagagtcct 895
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>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23,
              complete sequence
          Length = 191765

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                          
Query: 256    accctgatagttccatcggtgtacccggtgtagagggtgcttccgtccgcgctccagctc 315
              ||||||||||||||||| ||||| || | | |||||||||| || || ||||||||||||
Sbjct: 114367 accctgatagttccatcagtgtagccagcgaagagggtgctgccatcagcgctccagctc 114426

                                    
Query: 316    aggcttgtgcagtacagcatct 337
              |  |||||||||||||||||||
Sbjct: 114427 aaacttgtgcagtacagcatct 114448



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                          
Query: 336    ctggttcttggagacctggacttcaggcttaaggtcctgcacgacatgcttggactccag 395
              |||| ||||| || |||||||||| ||||| |||||||||| |||  |||||||||| ||
Sbjct: 115538 ctggctcttgaaggcctggacttctggcttgaggtcctgcatgacgagcttggactcgag 115597

                                           
Query: 396    gtcccagatcttgatagactcctctgtcg 424
              ||||||||||||||  || ||||||||||
Sbjct: 115598 gtcccagatcttgacggagtcctctgtcg 115626
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>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03,
              complete sequence
          Length = 177861

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                          
Query: 256    accctgatagttccatcggtgtacccggtgtagagggtgcttccgtccgcgctccagctc 315
              ||||||||||||||||| ||||| || | | |||||||||| || || ||||||||||||
Sbjct: 170795 accctgatagttccatcagtgtagccagcgaagagggtgctgccatcagcgctccagctc 170854

                                    
Query: 316    aggcttgtgcagtacagcatct 337
              |  |||||||||||||||||||
Sbjct: 170855 aaacttgtgcagtacagcatct 170876



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                          
Query: 336    ctggttcttggagacctggacttcaggcttaaggtcctgcacgacatgcttggactccag 395
              |||| ||||| || |||||||||| ||||| |||||||||| |||  |||||||||| ||
Sbjct: 171966 ctggctcttgaaggcctggacttctggcttgaggtcctgcatgacgagcttggactcgag 172025

                                           
Query: 396    gtcccagatcttgatagactcctctgtcg 424
              ||||||||||||||  || ||||||||||
Sbjct: 172026 gtcccagatcttgacggagtcctctgtcg 172054
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                            
Query: 256      accctgatagttccatcggtgtacccggtgtagagggtgcttccgtccgcgctccagctc 315
                ||||||||||||||||| ||||| || | | |||||||||| || || ||||||||||||
Sbjct: 27239399 accctgatagttccatcagtgtagccagcgaagagggtgctgccatcagcgctccagctc 27239458

                                      
Query: 316      aggcttgtgcagtacagcatct 337
                |  |||||||||||||||||||
Sbjct: 27239459 aaacttgtgcagtacagcatct 27239480



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                            
Query: 336      ctggttcttggagacctggacttcaggcttaaggtcctgcacgacatgcttggactccag 395
                |||| ||||| || |||||||||| ||||| |||||||||| |||  |||||||||| ||
Sbjct: 27240570 ctggctcttgaaggcctggacttctggcttgaggtcctgcatgacgagcttggactcgag 27240629

                                             
Query: 396      gtcccagatcttgatagactcctctgtcg 424
                ||||||||||||||  || ||||||||||
Sbjct: 27240630 gtcccagatcttgacggagtcctctgtcg 27240658
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 80/93 (86%)
 Strand = Plus / Minus

                                                                            
Query: 246      gatcttgaagaccctgatagttccatcggtgtacccggtgtagagggtgcttccgtccgc 305
                ||||||| ||| |||||| |||||||| ||||| || |  |||||||||||||| || ||
Sbjct: 28326297 gatcttgtagatcctgatggttccatctgtgtaaccagcatagagggtgcttccatctgc 28326238

                                                 
Query: 306      gctccagctcaggcttgtgcagtacagcatctg 338
                ||||||| ||| |||||||||||| ||||||||
Sbjct: 28326237 gctccagttcaagcttgtgcagtagagcatctg 28326205



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                            
Query: 336      ctggttcttggagacctggacttcaggcttaaggtcctgcacgacatgcttggactccag 395
                |||||||||||||||  |||  || ||||||||||||||||| |  ||||| ||||| ||
Sbjct: 28325045 ctggttcttggagacagggatctcgggcttaaggtcctgcacaatgtgctttgactcaag 28324986

                                       
Query: 396      gtcccagatcttgatagactcct 418
                 ||||||||||||||||| ||||
Sbjct: 28324985 atcccagatcttgatagagtcct 28324963
to top
>dbj|AP003452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0478H03
          Length = 167560

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 80/93 (86%)
 Strand = Plus / Minus

                                                                          
Query: 246    gatcttgaagaccctgatagttccatcggtgtacccggtgtagagggtgcttccgtccgc 305
              ||||||| ||| |||||| |||||||| ||||| || |  |||||||||||||| || ||
Sbjct: 160804 gatcttgtagatcctgatggttccatctgtgtaaccagcatagagggtgcttccatctgc 160745

                                               
Query: 306    gctccagctcaggcttgtgcagtacagcatctg 338
              ||||||| ||| |||||||||||| ||||||||
Sbjct: 160744 gctccagttcaagcttgtgcagtagagcatctg 160712



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                          
Query: 336    ctggttcttggagacctggacttcaggcttaaggtcctgcacgacatgcttggactccag 395
              |||||||||||||||  |||  || ||||||||||||||||| |  ||||| ||||| ||
Sbjct: 159552 ctggttcttggagacagggatctcgggcttaaggtcctgcacaatgtgctttgactcaag 159493

                                     
Query: 396    gtcccagatcttgatagactcct 418
               ||||||||||||||||| ||||
Sbjct: 159492 atcccagatcttgatagagtcct 159470
to top
>dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0519D04
          Length = 193068

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 80/93 (86%)
 Strand = Plus / Minus

                                                                         
Query: 246   gatcttgaagaccctgatagttccatcggtgtacccggtgtagagggtgcttccgtccgc 305
             ||||||| ||| |||||| |||||||| ||||| || |  |||||||||||||| || ||
Sbjct: 41397 gatcttgtagatcctgatggttccatctgtgtaaccagcatagagggtgcttccatctgc 41338

                                              
Query: 306   gctccagctcaggcttgtgcagtacagcatctg 338
             ||||||| ||| |||||||||||| ||||||||
Sbjct: 41337 gctccagttcaagcttgtgcagtagagcatctg 41305



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                         
Query: 336   ctggttcttggagacctggacttcaggcttaaggtcctgcacgacatgcttggactccag 395
             |||||||||||||||  |||  || ||||||||||||||||| |  ||||| ||||| ||
Sbjct: 40145 ctggttcttggagacagggatctcgggcttaaggtcctgcacaatgtgctttgactcaag 40086

                                    
Query: 396   gtcccagatcttgatagactcct 418
              ||||||||||||||||| ||||
Sbjct: 40085 atcccagatcttgatagagtcct 40063
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>ref|NM_101670.2| Arabidopsis thaliana ATARCA; nucleotide binding AT1G18080 (ATARCA)
            mRNA, complete cds
          Length = 1358

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                        
Query: 267  tccatcggtgtacccggtgtagagggtgcttccgtccgcgctccagctcaggcttgtgca 326
            |||||||||||| ||  || ||||||||||||| || ||||||||| | |||||||||||
Sbjct: 1075 tccatcggtgtaaccactgaagagggtgcttccatcagcgctccagttaaggcttgtgca 1016

               
Query: 327  gta 329
            |||
Sbjct: 1015 gta 1013
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>gb|AY063016.1| Arabidopsis thaliana putative WD-40 repeat protein (At1g18080)
           mRNA, complete cds
          Length = 1015

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                       
Query: 267 tccatcggtgtacccggtgtagagggtgcttccgtccgcgctccagctcaggcttgtgca 326
           |||||||||||| ||  || ||||||||||||| || ||||||||| | |||||||||||
Sbjct: 951 tccatcggtgtaaccactgaagagggtgcttccatcagcgctccagttaaggcttgtgca 892

              
Query: 327 gta 329
           |||
Sbjct: 891 gta 889
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>gb|AY035007.1| Arabidopsis thaliana putative WD-40 repeat protein (At1g18080) mRNA,
            complete cds
          Length = 1259

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                        
Query: 267  tccatcggtgtacccggtgtagagggtgcttccgtccgcgctccagctcaggcttgtgca 326
            |||||||||||| ||  || ||||||||||||| || ||||||||| | |||||||||||
Sbjct: 1020 tccatcggtgtaaccactgaagagggtgcttccatcagcgctccagttaaggcttgtgca 961

               
Query: 327  gta 329
            |||
Sbjct: 960  gta 958
to top
>emb|BX816078.1|CNS0ABTL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH26ZH09 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1236

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                        
Query: 267  tccatcggtgtacccggtgtagagggtgcttccgtccgcgctccagctcaggcttgtgca 326
            |||||||||||| ||  || ||||||||||||| || ||||||||| | |||||||||||
Sbjct: 1023 tccatcggtgtaaccactgaagagggtgcttccatcagcgctccagttaaggcttgtgca 964

               
Query: 327  gta 329
            |||
Sbjct: 963  gta 961
to top
>emb|BX814524.1|CNS0AC6T Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB78ZH04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1223

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                       
Query: 267 tccatcggtgtacccggtgtagagggtgcttccgtccgcgctccagctcaggcttgtgca 326
           |||||||||||| ||  || ||||||||||||| || ||||||||| | |||||||||||
Sbjct: 990 tccatcggtgtaaccactgaagagggtgcttccatcagcgctccagttaaggcttgtgca 931

              
Query: 327 gta 329
           |||
Sbjct: 930 gta 928
to top
>emb|BX816944.1|CNS0ABM9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH78ZA12 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1238

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                       
Query: 267 tccatcggtgtacccggtgtagagggtgcttccgtccgcgctccagctcaggcttgtgca 326
           |||||||||||| ||  || ||||||||||||| || ||||||||| | |||||||||||
Sbjct: 997 tccatcggtgtaaccactgaagagggtgcttccatcagcgctccagttaaggcttgtgca 938

              
Query: 327 gta 329
           |||
Sbjct: 937 gta 935
to top
>emb|BX815413.1|CNS0ABK1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS59ZB04 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1131

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                        
Query: 267  tccatcggtgtacccggtgtagagggtgcttccgtccgcgctccagctcaggcttgtgca 326
            |||||||||||| ||  || ||||||||||||| || ||||||||| | |||||||||||
Sbjct: 1000 tccatcggtgtaaccactgaagagggtgcttccatcagcgctccagttaaggcttgtgca 941

               
Query: 327  gta 329
            |||
Sbjct: 940  gta 938
to top
>emb|BX815215.1|CNS0ABGT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS42ZD07 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1253

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                       
Query: 267 tccatcggtgtacccggtgtagagggtgcttccgtccgcgctccagctcaggcttgtgca 326
           |||||||||||| ||  || ||||||||||||| || ||||||||| | |||||||||||
Sbjct: 998 tccatcggtgtaaccactgaagagggtgcttccatcagcgctccagttaaggcttgtgca 939

              
Query: 327 gta 329
           |||
Sbjct: 938 gta 936
to top
>emb|BX815043.1|CNS0ABBL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS27ZE09 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1198

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                       
Query: 267 tccatcggtgtacccggtgtagagggtgcttccgtccgcgctccagctcaggcttgtgca 326
           |||||||||||| ||  || ||||||||||||| || ||||||||| | |||||||||||
Sbjct: 997 tccatcggtgtaaccactgaagagggtgcttccatcagcgctccagttaaggcttgtgca 938

              
Query: 327 gta 329
           |||
Sbjct: 937 gta 935
to top
>gb|AY088480.1| Arabidopsis thaliana clone 7026 mRNA, complete sequence
          Length = 1234

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                        
Query: 267  tccatcggtgtacccggtgtagagggtgcttccgtccgcgctccagctcaggcttgtgca 326
            |||||||||||| ||  || ||||||||||||| || ||||||||| | |||||||||||
Sbjct: 1075 tccatcggtgtaaccactgaagagggtgcttccatcagcgctccagttaaggcttgtgca 1016

               
Query: 327  gta 329
            |||
Sbjct: 1015 gta 1013
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>gb|AC034107.5|T10F20 Sequence of BAC T10F20 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 81129

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                         
Query: 267   tccatcggtgtacccggtgtagagggtgcttccgtccgcgctccagctcaggcttgtgca 326
             |||||||||||| ||  || ||||||||||||| || ||||||||| | |||||||||||
Sbjct: 29946 tccatcggtgtaaccactgaagagggtgcttccatcagcgctccagttaaggcttgtgca 29887

                
Query: 327   gta 329
             |||
Sbjct: 29886 gta 29884
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>gb|AC069551.4|AC069551 Genomic sequence for Arabidopsis thaliana BAC T10O22 from chromosome I,
             complete sequence
          Length = 92948

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                         
Query: 267   tccatcggtgtacccggtgtagagggtgcttccgtccgcgctccagctcaggcttgtgca 326
             |||||||||||| ||  || ||||||||||||| || ||||||||| | |||||||||||
Sbjct: 15250 tccatcggtgtaaccactgaagagggtgcttccatcagcgctccagttaaggcttgtgca 15191

                
Query: 327   gta 329
             |||
Sbjct: 15190 gta 15188
to top
>gb|U77381.1|ATU77381 Arabidopsis thaliana WD-40 repeat protein (AtArcA) mRNA, complete
           cds
          Length = 984

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                       
Query: 267 tccatcggtgtacccggtgtagagggtgcttccgtccgcgctccagctcaggcttgtgca 326
           |||||||||||| ||  || ||||||||||||| || ||||||||| | |||||||||||
Sbjct: 951 tccatcggtgtaaccactgaagagggtgcttccatcagcgctccagttaaggcttgtgca 892

              
Query: 327 gta 329
           |||
Sbjct: 891 gta 889
to top
>emb|BX815631.1|CNS0ABFU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS79ZB07 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1146

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                       
Query: 267 tccatcggtgtacccggtgtagagggtgcttccgtccgcgctccagctcaggcttgtgca 326
           |||||||||||| ||  || ||||||||||||| || |||||||||   |||||||||||
Sbjct: 992 tccatcggtgtaaccactgaagagggtgcttccatcagcgctccagtcaaggcttgtgca 933

              
Query: 327 gta 329
           |||
Sbjct: 932 gta 930
to top
>emb|BX814194.1|CNS0AC6D Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB60ZC10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1110

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                       
Query: 267 tccatcggtgtacccggtgtagagggtgcttccgtccgcgctccagctcaggcttgtgca 326
           |||||||||||| ||  || ||||||||||||| || |||||||||   |||||||||||
Sbjct: 990 tccatcggtgtaaccactgaagagggtgcttccatcagcgctccagtaaaggcttgtgca 931

              
Query: 327 gta 329
           |||
Sbjct: 930 gta 928
to top
>ref|XM_501306.1| Yarrowia lipolytica CLIB122, YALI0C00913g predicted mRNA
          Length = 2739

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 388 gactccaggtcccagatcttga 409
           ||||||||||||||||||||||
Sbjct: 563 gactccaggtcccagatcttga 542
to top
>emb|BX816233.1|CNS0ABX9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH36ZC02 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1224

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 287 agagggtgcttccgtccgcgctccagctcaggcttgtgcagt 328
           ||||||||||| | || ||||||||| | |||||||||||||
Sbjct: 982 agagggtgctttcatcagcgctccagttaaggcttgtgcagt 941
to top
>dbj|AK108888.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-E02, full
           insert sequence
          Length = 1013

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 382 tgcttggactccaggtcccagatcttgatagact 415
           |||||||| |||| || |||||||||||||||||
Sbjct: 844 tgcttggattccaagttccagatcttgatagact 811
to top
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 388    gactccaggtcccagatcttga 409
              ||||||||||||||||||||||
Sbjct: 128398 gactccaggtcccagatcttga 128419
to top
>emb|X53574.1|CRGPLP C. reinhardtii Cblp gene for a G protein beta subunit-like
            polypeptide
          Length = 2314

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 390  ctccaggtcccagatcttgat 410
            |||||||||||||||||||||
Sbjct: 1643 ctccaggtcccagatcttgat 1623
to top
>gb|DQ122897.1| Chlamydomonas incerta G protein beta subunit-like polypeptide
           (cblP) mRNA, partial cds
          Length = 843

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 390 ctccaggtcccagatcttgat 410
           |||||||||||||||||||||
Sbjct: 801 ctccaggtcccagatcttgat 781
to top
>gb|AC011037.8| Homo sapiens chromosome 8, clone RP11-7F18, complete sequence
          Length = 175023

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 73    tccatagtactcataatgggc 93
             |||||||||||||||||||||
Sbjct: 52677 tccatagtactcataatgggc 52697
to top
>gb|AY393848.1| Gallus gallus guanine nucleotide-binding protein mRNA, complete cds
          Length = 954

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 391 tccaggtcccagatcttgat 410
           ||||||||||||||||||||
Sbjct: 785 tccaggtcccagatcttgat 766
to top
>gb|AC153919.8| Mus musculus 10 BAC RP23-91E23 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 264561

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 243    ctggatcttgaagaccctga 262
              ||||||||||||||||||||
Sbjct: 122243 ctggatcttgaagaccctga 122224
to top
>gb|AC131706.4| Mus musculus BAC clone RP24-136E12 from chromosome 7, complete sequence
          Length = 127581

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 343   ttggagacctggacttcagg 362
             ||||||||||||||||||||
Sbjct: 30846 ttggagacctggacttcagg 30865
to top
>gb|AC159474.9| Mus musculus 10 BAC RP23-28P17 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 230201

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 243   ctggatcttgaagaccctga 262
             ||||||||||||||||||||
Sbjct: 41391 ctggatcttgaagaccctga 41372
to top
>emb|AL365335.11| Human DNA sequence from clone RP11-278E14 on chromosome 6, complete
             sequence
          Length = 160889

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   caaatcacctaagcagaaag 120
             ||||||||||||||||||||
Sbjct: 65939 caaatcacctaagcagaaag 65920
to top
>gb|AC099573.15| Mus musculus chromosome 7, clone RP23-28E6, complete sequence
          Length = 212811

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 343    ttggagacctggacttcagg 362
              ||||||||||||||||||||
Sbjct: 199302 ttggagacctggacttcagg 199321
to top
>gb|AC113054.14| Mus musculus chromosome 15, clone RP23-251L21, complete sequence
          Length = 179314

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    aaagcagcagacaaaacaaagcct 52
             ||||| ||||||||||||||||||
Sbjct: 78677 aaagccgcagacaaaacaaagcct 78700
to top
>emb|BX255878.13| Mouse DNA sequence from clone RP23-444O21 on chromosome 11, complete
             sequence
          Length = 117480

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   tacaatgctgccttataaca 172
             ||||||||||||||||||||
Sbjct: 39416 tacaatgctgccttataaca 39397
to top
>emb|AL590503.11| Mouse DNA sequence from clone RP23-128M23 on chromosome 13, complete
              sequence
          Length = 169547

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 121    taaatagtaactcaagctgaaagtacca 148
              |||||||| || ||||||||||||||||
Sbjct: 152172 taaatagttacacaagctgaaagtacca 152145
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>ref|NM_001004378.1| Gallus gallus guanine nucleotide binding protein (G protein), beta
           polypeptide 2-like 1 (GNB2L1), mRNA
          Length = 1075

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 391 tccaggtcccagatcttgat 410
           ||||||||||||||||||||
Sbjct: 867 tccaggtcccagatcttgat 848
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>emb|CR386189.1| Gallus gallus finished cDNA, clone ChEST9g24
          Length = 1093

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 391 tccaggtcccagatcttgat 410
           ||||||||||||||||||||
Sbjct: 867 tccaggtcccagatcttgat 848
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>gb|M24193.1|CHKMHB123A Chicken MHC B complex protein (C12-3) mRNA, complete cds
          Length = 1075

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 391 tccaggtcccagatcttgat 410
           ||||||||||||||||||||
Sbjct: 867 tccaggtcccagatcttgat 848
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>emb|AL732623.7| Mouse DNA sequence from clone RP23-276F7 on chromosome 4, complete
            sequence
          Length = 82990

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 93   ctcatcaacaaatcacctaagcag 116
            ||||| ||||||||||||||||||
Sbjct: 4286 ctcatgaacaaatcacctaagcag 4309


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,271,931
Number of Sequences: 3902068
Number of extensions: 3271931
Number of successful extensions: 58006
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57900
Number of HSP's gapped (non-prelim): 106
length of query: 424
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 402
effective length of database: 17,147,199,772
effective search space: 6893174308344
effective search space used: 6893174308344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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