>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
            (Somatostatin receptor-interacting protein)
            (SSTR-interacting protein) (SSTRIP)
          Length = 2161

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 8/59 (13%)
 Frame = +1

Query: 193  HHQKPGDHQNHVAQHKAPCADDPARRTLGARIVTG--------STLAGARRVGHRLAPT 345
            HH  P  H   V +       DPARR LG R   G        S  A  R + HRL PT
Sbjct: 1393 HHHSPHAHHEPVLRLWGASPPDPARRELGYRAGLGSQEKSLPASPPAARRSLLHRLPPT 1451

>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
            (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon)
            (Somatostatin receptor-interacting protein)
            (SSTR-interacting protein) (SSTRIP)
          Length = 2167

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 10/62 (16%)
 Frame = +1

Query: 190  LHHQKPGDHQNHVAQHKAPCA--DDPARRTLGAR--------IVTGSTLAGARRVGHRLA 339
            LHH  P    +  A+H+       DPARR LG R         +T S  A  R + HRL 
Sbjct: 1396 LHHHSPHSPHSPHARHEPVLRLWGDPARRELGYRAGLGSQEKALTASPPAARRSLLHRLP 1455

Query: 340  PT 345
            PT
Sbjct: 1456 PT 1457

>ODPB_RAT (P49432) Pyruvate dehydrogenase E1 component subunit beta,|
           mitochondrial precursor (EC 1.2.4.1) (PDHE1-B)
          Length = 359

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -2

Query: 299 LPVTMRAPRVRRAGSSAQGALCWATWFWWSPG 204
           +P+  R P    AG +AQ + C+A W+   PG
Sbjct: 140 VPIVFRGPNGASAGVAAQHSQCFAAWYGHCPG 171

>ODPB_MOUSE (Q9D051) Pyruvate dehydrogenase E1 component subunit beta,|
           mitochondrial precursor (EC 1.2.4.1) (PDHE1-B)
          Length = 359

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -2

Query: 299 LPVTMRAPRVRRAGSSAQGALCWATWFWWSPG 204
           +P+  R P    AG +AQ + C+A W+   PG
Sbjct: 140 VPIVFRGPNGASAGVAAQHSQCFAAWYGHCPG 171

>ODPB_HUMAN (P11177) Pyruvate dehydrogenase E1 component subunit beta,|
           mitochondrial precursor (EC 1.2.4.1) (PDHE1-B)
          Length = 359

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -2

Query: 299 LPVTMRAPRVRRAGSSAQGALCWATWFWWSPG 204
           +P+  R P    AG +AQ + C+A W+   PG
Sbjct: 140 VPIVFRGPNGASAGVAAQHSQCFAAWYGHCPG 171

>RNFD_YERPE (Q8ZED2) Electron transport complex protein rnfD|
          Length = 351

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
 Frame = -2

Query: 245 GALCWATWFWWSPGF*WCSLIILY---MHWHEP*FFLFPSGKC 126
           G L    W W + GF    L++L+   +HWH P  FL   G C
Sbjct: 210 GVLAGLGWQWVNTGFLVGGLLLLWRKAIHWHIPVSFLLALGGC 252

>S6A19_HUMAN (Q695T7) Sodium-dependent neutral amino acid transporter B(0)|
           (System B(0) neutral amino acid transporter) (B(0)AT1)
           (Solute carrier family 6 member 19)
          Length = 634

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +1

Query: 172 MYRIIRLHHQKPGDHQNHVA 231
           +Y++IR H QKPGDHQ  V+
Sbjct: 602 IYKLIRNHCQKPGDHQGLVS 621

>ODPB_ARATH (Q38799) Pyruvate dehydrogenase E1 component subunit beta,|
           mitochondrial precursor (EC 1.2.4.1) (PDHE1-B)
          Length = 363

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 299 LPVTMRAPRVRRAGSSAQGALCWATWFWWSPG 204
           +P+  R P    AG  AQ + C+A W+   PG
Sbjct: 143 VPIVFRGPNGAAAGVGAQHSQCYAAWYASVPG 174

>FA9_CHICK (Q804X6) Coagulation factor IX precursor (EC 3.4.21.22) (Christmas|
           factor) [Contains: Coagulation factor IXa light chain;
           Coagulation factor IXa heavy chain]
          Length = 471

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 17/53 (32%), Positives = 23/53 (43%)
 Frame = -2

Query: 323 TRRAPASVLPVTMRAPRVRRAGSSAQGALCWATWFWWSPGF*WCSLIILYMHW 165
           T  APA ++P+T    RV     S +G L W      S G  +C   I+   W
Sbjct: 219 TSAAPAKIVPITKNDTRVVGGYDSVKGQLPWQVHLVDSRGLGFCGGSIINEKW 271

>SYST_LYCES (P27058) Systemin precursor|
          Length = 200

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 14/57 (24%), Positives = 27/57 (47%)
 Frame = +1

Query: 133 PEGNKKNHGSCQCMYRIIRLHHQKPGDHQNHVAQHKAPCADDPARRTLGARIVTGST 303
           P  + KN G        ++LHH+K GD +  + + + P  D   + T+ + ++   T
Sbjct: 4   PSYDIKNKGDDMQEEPKVKLHHEKGGDEKEKIIEKETPSQDINNKDTISSYVLRDDT 60

>AXN_CHICK (O42400) Axin (Axis inhibition protein)|
          Length = 841

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
 Frame = +3

Query: 171 HVQNYQTTPS-----KTRRPPEPRSPAQGSLRRRPGTTNSWRPHCHWQH 302
           HVQ    TP        R  P+PRSP  G L +  GT  +  P  H +H
Sbjct: 476 HVQRVMKTPGCQSPGPGRHSPKPRSPESGHLGKLSGTLGTIPPG-HGKH 523


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,526,150
Number of Sequences: 219361
Number of extensions: 1040568
Number of successful extensions: 3348
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3347
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)