>SECA_GUITH (O78441) Preprotein translocase secA subunit|
          Length = 877

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 26/65 (40%), Positives = 33/65 (50%)
 Frame = +3

Query: 6   NRDGPVLIRTTSDYQTKLLEKHSCPYNLPTLTNKLTHKPQW*CNVEYEAKIKVGNGRALH 185
           N   PVLI TTS  +++LL      Y +P   N L  KP+   NV+ EA+I    GR   
Sbjct: 424 NLGRPVLIGTTSVEKSELLSSLLKEYGVP--HNLLNAKPE---NVQREAEIVAQAGRLGA 478

Query: 186 VTHRT 200
           VT  T
Sbjct: 479 VTIAT 483

>YJA1_SCHPO (Q9USN4) Putative transporter C1529.01|
          Length = 462

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -2

Query: 205 CCVRCVTWSALPFPTFIFASYSTLHYHWGLCVSLFVRV 92
           CCVR +  +A  FP F    Y TL Y WG  +  F+ V
Sbjct: 426 CCVRSI--AAFAFPLFGQDMYDTLGYGWGNSLLAFMYV 461

>RBL2_RAT (O55081) Retinoblastoma-like protein 2 (130 kDa|
           retinoblastoma-associated protein) (PRB2) (P130) (RBR-2)
           (PPAR-alpha-interacting complex protein 128) (PRIC128)
          Length = 1135

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -2

Query: 214 LLICCVRCVTWSALP---FPTFIFASYSTLHYHWGLCVSLFVR 95
           LL CC+  V +S  P   FP FI   +   HYH+   + +F+R
Sbjct: 529 LLACCLEVVAFSYKPPGNFP-FIAEIFDVPHYHFYKVIEVFIR 570

>RBL2_MOUSE (Q64700) Retinoblastoma-like protein 2 (130 kDa|
           retinoblastoma-associated protein) (PRB2) (P130) (RBR-2)
          Length = 1135

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -2

Query: 214 LLICCVRCVTWSALP---FPTFIFASYSTLHYHWGLCVSLFVR 95
           LL CC+  V +S  P   FP FI   +   HYH+   + +F+R
Sbjct: 529 LLACCLEVVAFSHKPPGNFP-FIAEIFDVPHYHFYKVIEVFIR 570

>PALI_YARLI (Q7Z8R5) pH-response regulator protein palI/RIM9|
          Length = 728

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 13/79 (16%)
 Frame = -1

Query: 239 PAAG*FTLVINLLCAMRDVERSAIS--YLYFCFVFHITLPLGFMC*FICE---------- 96
           P A  FTL++ +L  +  ++  A S  YL FC VF +   L  +  F+ +          
Sbjct: 93  PIATGFTLILTVLAMLAHIQGPASSSRYLLFCLVFSLPTFLLVLLSFLVDILLFVPHLDW 152

Query: 95  -GWEIIRAAVFF**LGLVI 42
            GW ++ A +     G+V+
Sbjct: 153 GGWIVLAATILVAISGVVL 171

>MRGRE_MOUSE (Q91ZB7) Mas-related G-protein coupled receptor member E|
           (Evolutionary breakpoint transcript 3 protein)
          Length = 310

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 24/83 (28%), Positives = 30/83 (36%), Gaps = 21/83 (25%)
 Frame = -2

Query: 232 LVDLLWLLI-------CCVRCVTWSAL--------------PFPTFIFASYSTLHYHWGL 116
           L D+LWL++       CC  CVT   L               FPT +            L
Sbjct: 169 LCDMLWLVVAVLLAALCCTMCVTSLLLLLRVERGPERHQPRGFPTLVL-----------L 217

Query: 115 CVSLFVRVGRLYGQLCFSNNLVW 47
            V LF+  G  +G    S NL W
Sbjct: 218 AVLLFLFCGLPFGIFWLSKNLSW 240

>GPR88_HUMAN (Q9GZN0) Probable G-protein coupled receptor 88 (Striatum-specific|
           G-protein coupled receptor)
          Length = 384

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 20/53 (37%), Positives = 25/53 (47%)
 Frame = -2

Query: 274 PPEPILDRRTAGRRLVDLLWLLICCVRCVTWSALPFPTFIFASYSTLHYHWGL 116
           P  P L  R A RRL  L  LL+CCV  +  +  P      AS  +L   WG+
Sbjct: 267 PLPPALHPRRAQRRLSGLSVLLLCCVFLL--ATQPLVWVSLASGFSLPVPWGV 317


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,752,218
Number of Sequences: 219361
Number of extensions: 918473
Number of successful extensions: 3007
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2958
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)