ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart09e04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TRPD_GLUOX (Q5FNM7) Anthranilate phosphoribosyltransferase (EC 2... 28 9.6
2MET31_YEAST (Q03081) Transcriptional regulator MET31 (Methionine... 28 9.6
3FCGR2_BOVIN (Q28110) Low affinity immunoglobulin gamma Fc region... 28 9.6

>TRPD_GLUOX (Q5FNM7) Anthranilate phosphoribosyltransferase (EC 2.4.2.18)|
          Length = 363

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 20/65 (30%), Positives = 28/65 (43%)
 Frame = +2

Query: 29  PTQKTKNKETXTASKASDPITSLTVGPGTPLTHY*SQLRTTHIPLLARPCTQLRDVHCAP 208
           P  K  N+   +AS A+D +  L + P   L     +LR   +  LA P       H AP
Sbjct: 110 PVAKHGNRALSSASGATDVLEVLGIPPTDDLELQGRRLREDGLVFLAAPQHHPAMRHAAP 169

Query: 209 TRRQL 223
            R+ L
Sbjct: 170 VRKAL 174



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>MET31_YEAST (Q03081) Transcriptional regulator MET31 (Methionine-requiring|
           protein 31)
          Length = 177

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +1

Query: 235 NTPTHTDPIINELRYR 282
           ++PTHTDPII EL +R
Sbjct: 26  SSPTHTDPIIRELLHR 41



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>FCGR2_BOVIN (Q28110) Low affinity immunoglobulin gamma Fc region receptor II|
           precursor (Fc-gamma RII) (FcRII) (IgG Fc receptor II)
           (CD32 antigen)
          Length = 296

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 26/76 (34%), Positives = 31/76 (40%)
 Frame = -3

Query: 331 LAFAWLRRARAVALPWHGTLVRLLWDPYVWAYFVSG*LSSRGCAMYVT*LRTWSS*QWYV 152
           LAF   RR RA   PWH     LLW   ++   VSG          VT    W +    V
Sbjct: 7   LAFPAARRNRAHCTPWHPWGHMLLWTALLFLAPVSG--KPDLPKAVVTIQPAWIN----V 60

Query: 151 CRSQLASIMCQGRSGS 104
            R    ++ CQG S S
Sbjct: 61  LREDHVTLTCQGTSFS 76


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,788,982
Number of Sequences: 219361
Number of extensions: 991033
Number of successful extensions: 2384
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2384
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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