>NU5M_PAPHA (Q95885) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 603

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
 Frame = +2

Query: 101 PYQSETVYQTHPVFYNMLHVCVSSMLYE-RRKQHLH----LIFTLPSTSRTELVVHLLIT 265
           PY +     TH  F  ML +C  S+++    +Q +     L  T+P TS + ++ +L +T
Sbjct: 322 PYLAFLHICTHAFFKAMLFICSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSLIIGNLALT 381

Query: 266 RVLFTHALVGRRAVV 310
            + F      +  ++
Sbjct: 382 GIPFLTGFYSKDLII 396


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,412,803
Number of Sequences: 219361
Number of extensions: 860914
Number of successful extensions: 1454
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1454
length of database: 80,573,946
effective HSP length: 93
effective length of database: 60,173,373
effective search space used: 1444160952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)