ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart09c12 |
|---|---|
| Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 232 bits (591), Expect = 4e-61 Identities = 104/113 (92%), Positives = 108/113 (95%) Frame = -3 Query: 468 VRCGYPPAAHVGRALATGIFERVHVRTYGSDNGCNQNFGWEGSWNEWTAAYPATRFYVGL 289 VRCGYPPAAHVGRALATGIFERVHVRTY SD CNQN GWEGSW++WTAAYPATRFYVGL Sbjct: 192 VRCGYPPAAHVGRALATGIFERVHVRTYESDKWCNQNLGWEGSWDKWTAAYPATRFYVGL 251 Query: 288 TADDKSYQWVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIKYYA 130 TADDKS+QWVHPKNVYY VAPV+QKKDNYGGIMLWDRYFDKQTNYSSLIKYYA Sbjct: 252 TADDKSHQWVHPKNVYYGVAPVAQKKDNYGGIMLWDRYFDKQTNYSSLIKYYA 304
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 101 bits (252), Expect = 8e-22 Identities = 54/119 (45%), Positives = 70/119 (58%), Gaps = 6/119 (5%) Frame = -3 Query: 468 VRCGYPPAAHVGRALATGIFERVHVRTYGSDNGCNQNF----GWEGSWNEWTAAYPATRF 301 VRC +P + +AL T +FER+HVR Y D C+ N G WN+WTA YP + Sbjct: 188 VRCAFPDP-RMKKALDTKLFERIHVRFY-DDATCSYNHAGLAGVMAQWNKWTARYPGSHV 245 Query: 300 YVGLTADDK--SYQWVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIKYYA 130 Y+GL A + V K +YY + P QK NYGGIMLWDR++DKQT Y +KY+A Sbjct: 246 YLGLAAANVPGKNDNVFIKQLYYDLLPNVQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 92.0 bits (227), Expect = 7e-19 Identities = 43/106 (40%), Positives = 67/106 (63%), Gaps = 1/106 (0%) Frame = -3 Query: 465 RCGYPPAAHVGRALATGIFERVHVRTYGSDNGCNQNFGWEGSWNEWTAAYPATRFYVGLT 286 RC YP + +ALATG+F R+HVR +G D C + + SW +W AA+P ++ Y+GL Sbjct: 186 RCSYPDH-RLEKALATGVFARIHVRMFG-DEQCTMSPRY--SWEKWAAAFPGSKVYIGLV 241 Query: 285 AD-DKSYQWVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYS 151 A ++ W+ K++YY + + NYGG+ ++DRYFDK+ NY+ Sbjct: 242 ASPEQDSAWMFQKDLYYEMLQFVRSLPNYGGLAIYDRYFDKKANYT 287
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 67.8 bits (164), Expect = 1e-11 Identities = 42/115 (36%), Positives = 63/115 (54%), Gaps = 6/115 (5%) Frame = -3 Query: 465 RCGYPPAAHVGRALATGIFERVHVRTYGSDNGCNQNFGWEG----SWNEWTAAYPATRFY 298 +C +P G AL TG+F+ V V+ Y + C + G SWN WT++ +T + Sbjct: 186 QCPFPDKVP-GTALNTGLFDYVWVQFYNNPP-CQYSSGNTNNLLNSWNRWTSSINSTGSF 243 Query: 297 VGLTADDKSY-QWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 139 +GL A + + P NV S + PV ++ YGG+MLW +Y+D Q+ YSS IK Sbjct: 244 MGLPASSAAAGRGFIPANVLTSQILPVIKRSPKYGGVMLWSKYYDDQSGYSSSIK 298
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 64.3 bits (155), Expect = 1e-10 Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 8/117 (6%) Frame = -3 Query: 465 RCGYPPAAHVGRALATGIFERVHVRTYGS-----DNGCNQNFGWEGSWNEWTAAYPATRF 301 +C YP A H+ A+ TG+F+ V V+ Y + NG N +WN+WT++ A + Sbjct: 178 QCPYPDA-HLDSAIQTGLFDYVWVQFYNNPQCQYSNGNINNL--VNAWNQWTSSQ-AKQV 233 Query: 300 YVGLTADDKSYQ--WVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 139 ++G+ A D + + P +V S V P + YGG+M+WDR+ D Q+ YS+ IK Sbjct: 234 FLGVPASDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGVMIWDRFNDAQSGYSNAIK 290
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 63.2 bits (152), Expect = 3e-10 Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 6/109 (5%) Frame = -3 Query: 450 PAAHVGRALATGIFERVHVRTYGSDNGCNQNFG----WEGSWNEWTAAYPATRFYVGLTA 283 P ++G AL TG+F+ V V+ Y + C + G SWN WT + A + ++GL A Sbjct: 188 PDRYLGTALNTGLFDYVWVQFYNNPP-CQYSSGNINNIINSWNRWTTSINAGKIFLGLPA 246 Query: 282 DDKSYQ--WVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYSSLI 142 ++ +V P + + P +K YGG+MLW +++D + YSS I Sbjct: 247 APEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSSSI 295
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 62.8 bits (151), Expect = 4e-10 Identities = 45/118 (38%), Positives = 62/118 (52%), Gaps = 9/118 (7%) Frame = -3 Query: 465 RCGYPPAAHVGRALATGIFERVHVRTYGSDN----GCNQNFGWEGSWNEWTAAYPATRFY 298 +C +P G AL TG+F+ V V+ Y + ++NF + WN+WT+ PA + Y Sbjct: 181 QCPFPDKLLNG-ALQTGLFDYVWVQFYNNPECEFMSNSENF--KRRWNQWTSI-PAKKLY 236 Query: 297 VGL----TADDKSYQWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 139 +GL TA Y PK V S V P + YGG+MLW+R FD Q YSS I+ Sbjct: 237 IGLPAAKTAAGNGYI---PKQVLMSQVLPFLKGSSKYGGVMLWNRKFDVQCGYSSAIR 291
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 61.2 bits (147), Expect = 1e-09 Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 7/115 (6%) Frame = -3 Query: 465 RCGYPPAAHVGRALATGIFERVHVRTYGS-----DNGCNQNFGWEGSWNEWTAAYPATRF 301 +C +P +G AL T F+ V ++ Y + +G QN SWN+WT + A +F Sbjct: 187 QCPFPDRL-MGSALNTKRFDYVWIQFYNNPPCSYSSGNTQNLF--DSWNKWTTSIAAQKF 243 Query: 300 YVGLTADDKSYQ--WVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYSSLI 142 ++GL A ++ ++ P + + P +K YGG+MLW +++D + YSS I Sbjct: 244 FLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSSSI 298
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 61.2 bits (147), Expect = 1e-09 Identities = 42/113 (37%), Positives = 59/113 (52%), Gaps = 9/113 (7%) Frame = -3 Query: 450 PAAHVGRALATGIFERVHVRTYGS------DNGCNQNFGWEGSWNEWTAAYPATRFYVGL 289 P AH+ A+ TG+F+ V V+ Y + DN N SWN+WTA +P ++ Y+GL Sbjct: 183 PDAHLDAAIKTGLFDSVWVQFYNNPPCMFADNADNLL----SSWNQWTA-FPTSKLYMGL 237 Query: 288 TADDKSYQ--WVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 139 A ++ P +V S V P + NYGG+MLW + FD YS IK Sbjct: 238 PAAREAAPSGGFIPADVLISQVLPTIKASSNYGGVMLWSKAFD--NGYSDSIK 288
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 58.2 bits (139), Expect = 1e-08 Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 6/109 (5%) Frame = -3 Query: 450 PAAHVGRALATGIFERVHVRTYGSDNGCNQNFGWEG----SWNEWTAAYPATRFYVGLTA 283 P AH+ A+ TG+F+ V V+ Y + C + G SWN+WT++ A + ++G+ A Sbjct: 188 PDAHLDTAIKTGLFDIVWVQFYNNPP-CQYSSGNTNDLISSWNQWTSSQ-AKQLFLGVPA 245 Query: 282 DDKSY-QWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLI 142 + P +V S V P + YGG+MLWDR+ D Q+ YS I Sbjct: 246 STAAAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDGQSGYSGAI 294
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 52.0 bits (123), Expect = 8e-07 Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 5/109 (4%) Frame = -3 Query: 450 PAAHVGRALATGIFERVHVRTYGSDNGCNQNFGWEG---SWNEWTAAYPATRFYVGLTAD 280 P A + A+ATG+F+ V V+ Y + C + + SWN+WT A + ++GL A Sbjct: 186 PDASLSTAIATGLFDYVWVQFYNNPP-CQYDTSADNLLSSWNQWTTVQ-ANQIFLGLPAS 243 Query: 279 -DKSYQWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 139 D + P + S V P + YGG+MLW + +D + YSS IK Sbjct: 244 TDAAGSGFIPADALTSQVLPTIKGSAKYGGVMLWSKAYD--SGYSSAIK 290
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 49.3 bits (116), Expect = 5e-06 Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 6/110 (5%) Frame = -3 Query: 450 PAAHVGRALATGIFERVHVRTYGSDNGCNQNFG----WEGSWNEWTAAYPATRFYVGL-T 286 P + AL+TG+F+ V V+ Y + C + G + WN+W A A + ++GL Sbjct: 183 PDTWLNGALSTGLFDYVWVQFYNNPP-CQYSGGSADNLKNYWNQWNAIQ-AGKIFLGLPA 240 Query: 285 ADDKSYQWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 139 A + P +V S V P+ YGG+MLW +++D YSS IK Sbjct: 241 AQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVMLWSKFYD--NGYSSAIK 288
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 42.7 bits (99), Expect = 5e-04 Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 11/116 (9%) Frame = -3 Query: 450 PAAHVGRALATGIFERVHVRTYGSDNGCNQNFG----WEGSWNEWT-AAYPATR-FYVGL 289 P ++ A+ T F+ + VR Y +D C + G +W WT + YP + ++ L Sbjct: 193 PDEYLDNAIQTRHFDYIFVRFY-NDRSCQYSTGNIQRIRNAWLSWTKSVYPRDKNLFLEL 251 Query: 288 TADDKSYQ---WVHPKNVYYSVAP-VSQKKDNYGGIMLWDRYFDKQTNYS-SLIKY 136 A + ++ P + V P + + Y GI LW+R DK+T YS ++I+Y Sbjct: 252 PASQATAPGGGYIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNIIRY 307
>CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14)| Length = 542 Score = 32.0 bits (71), Expect = 0.82 Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 8/103 (7%) Frame = -3 Query: 465 RCGYPPAAHVGRALATGIFERVHVRTYG---SDNGCNQNFGWEGSWNEWTAAYPATRFYV 295 +C +P A +G L + F+ V+V+ Y S G + NF +W + T+ + Sbjct: 195 QCPFPDAI-LGSVLNSASFDYVNVQFYNNYCSATGSSFNFDTWDNWAKTTSPNKNVKIMF 253 Query: 294 GL----TADDKSYQWVHPKNVYYSVAP-VSQKKDNYGGIMLWD 181 + TA Y P + ++ P ++ K +YGG+ +WD Sbjct: 254 TVPGSSTAAGSGYV---PMSTLQTIVPSLASKYSSYGGVSVWD 293
>G6PI_ASHGO (Q758L0) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 555 Score = 31.2 bits (69), Expect = 1.4 Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 6/102 (5%) Frame = -3 Query: 444 AHVGRALATGIFERVHVRTYGSDNGCNQNFGWE----GSWNEWTAAYPATRFYVGLTADD 277 AH+ + A V +G D FG+E G ++ W+A + Y+G + Sbjct: 247 AHISKHFAALSTNETEVAKFGIDT--KNMFGFESWVGGRYSVWSAIGLSVALYIGFDQFE 304 Query: 276 KSYQWVHPKNVYYSVAPVSQKKDNYGGIM-LW-DRYFDKQTN 157 + + +++ P+ GG++ +W + +FD QT+ Sbjct: 305 DFLKGAEAVDKHFTSTPIEDNIPLLGGLLSVWYNNFFDAQTH 346
>CHI1_RHIOL (P29026) Chitinase 1 precursor (EC 3.2.1.14)| Length = 540 Score = 30.8 bits (68), Expect = 1.8 Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 8/103 (7%) Frame = -3 Query: 465 RCGYPPAAHVGRALATGIFERVHVRTYG---SDNGCNQNFGWEGSWNEWTAAYPATRFYV 295 +C +P A +G L + F+ V+V+ Y S G + NF +W + T+ + Sbjct: 195 QCPFPDAI-LGSVLNSASFDYVNVQFYNNYCSATGSSFNFDTWDNWAKTTSPNKNVKIMF 253 Query: 294 GL----TADDKSYQWVHPKNVYYSVAP-VSQKKDNYGGIMLWD 181 + TA Y P + ++ P ++ + +YGG+ +WD Sbjct: 254 TIPGSPTAAGSGYV---PMSTLQTIVPSLASEYSSYGGVSVWD 293
>NIRB_KLEOX (Q06458) Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)| Length = 957 Score = 30.4 bits (67), Expect = 2.4 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = -3 Query: 294 GLTADDKSYQWVH-PKNVYYSVAPVSQKKDNYGGIMLWD 181 G T +SYQW H P+ VY + + K+ GG+++ D Sbjct: 336 GRTPGCQSYQWTHGPQQVYKKIVVSADGKNLLGGVLVGD 374
>G6PI_NEUCR (Q7S986) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 561 Score = 28.9 bits (63), Expect = 6.9 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 6/73 (8%) Frame = -3 Query: 357 FGWE----GSWNEWTAAYPATRFYVGLTADDKSYQWVHPKNVYYSVAPVSQKKDNYGGIM 190 FG+E G ++ W+A + YVG K H + ++ AP+ + GGI+ Sbjct: 276 FGFESWVGGRYSVWSAIGLSVALYVGYENFHKFLAGAHAMDNHFRTAPLKENIPVLGGIL 335 Query: 189 -LW-DRYFDKQTN 157 +W +++ QT+ Sbjct: 336 SVWYSNFYNAQTH 348
>CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel alpha-1B subunit| (Voltage-gated calcium channel alpha subunit Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII) Length = 2339 Score = 28.5 bits (62), Expect = 9.1 Identities = 17/33 (51%), Positives = 17/33 (51%) Frame = +3 Query: 177 TGPRA*CRRSCPSSATPARRCSRRSWGVPTGRT 275 TGPRA C R SS PARR R PT T Sbjct: 968 TGPRA-CPREAESSEEPARRHRARHKAPPTQET 999 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,493,201 Number of Sequences: 219361 Number of extensions: 1048727 Number of successful extensions: 3108 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 3019 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3092 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
