ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart09c01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK104076.1| Oryza sativa (japonica cultivar-group) cDNA clon... 256 5e-65
2dbj|AK103551.1| Oryza sativa (japonica cultivar-group) cDNA clon... 256 5e-65
3dbj|AK061835.1| Oryza sativa (japonica cultivar-group) cDNA clon... 256 5e-65
4dbj|AB037150.1| Oryza sativa (japonica cultivar-group) OsRPN8 mR... 256 5e-65
5gb|AY111094.1| Zea mays CL9802_1 mRNA sequence 208 1e-50
6gb|AY109022.1| Zea mays PCO082032 mRNA sequence 208 1e-50
7gb|DQ222517.1| Solanum tuberosum clone 119G03 unknown mRNA 139 8e-30
8emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4,... 109 8e-21
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 109 8e-21
10ref|NM_111962.3| Arabidopsis thaliana unknown protein AT3G11270 ... 101 2e-18
11gb|AY258412.1| Arabidopsis thaliana 26S proteasome subunit RPN8b... 101 2e-18
12gb|AY639600.1| Lycopersicon pimpinellifolium orion Hcr9 gene clu... 101 2e-18
13gb|AY230839.1| Arabidopsis thaliana 26S proteasome subunit RPN8a... 94 4e-16
14gb|AY087393.1| Arabidopsis thaliana clone 34868 mRNA, complete s... 94 4e-16
15gb|U54560.1|ATU54560 Arabidopsis thaliana putative 26S proteasom... 94 4e-16
16gb|AC073395.6|AC073395 Arabidopsis thaliana chromosome 3 BAC F11... 90 7e-15
17ref|NM_120660.2| Arabidopsis thaliana ATHMOV34 AT5G05780 (ATHMOV... 82 2e-12
18gb|AY230840.1| Arabidopsis thaliana 26S proteasome subunit RPN8a... 82 2e-12
19dbj|AK222016.1| Arabidopsis thaliana mRNA for 26S proteasome reg... 82 2e-12
20gb|AF378878.1|AF378878 Arabidopsis thaliana AT5g05780/MJJ3_19 mR... 82 2e-12
21emb|BX830010.1|CNS0A09A Arabidopsis thaliana Full-length cDNA Co... 82 2e-12
22gb|BT002610.1| Arabidopsis thaliana At5g05780/MJJ3_19 mRNA, comp... 82 2e-12
23emb|BX833880.1|CNS09Z77 Arabidopsis thaliana Full-length cDNA Co... 78 3e-11
24dbj|AB005237.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 78 3e-11
25ref|XM_804367.1| Trypanosoma cruzi strain CL Brener hypothetical... 44 0.37
26ref|XM_811105.1| Trypanosoma cruzi strain CL Brener hypothetical... 44 0.37
27ref|XM_749538.1| Aspergillus fumigatus Af293 nuclear exosome com... 42 1.5
28ref|XM_638353.1| Dictyostelium discoideum hypothetical protein (... 40 5.8
29gb|AC007889.9| Drosophila melanogaster clone BACR48E12, complete... 40 5.8
30gb|AC007692.5| Drosophila melanogaster clone BACR06O05, complete... 40 5.8
31gb|AC138228.10| Mus musculus chromosome 17, clone RP23-304G12, c... 40 5.8
32gb|AC166654.1| Mus musculus BAC clone RP23-426B21 from chromosom... 40 5.8
33gb|AF038842.1| Drosophila melanogaster midline fasciclin precurs... 40 5.8
34ref|NM_176478.1| Drosophila melanogaster midline fasciclin CG335... 40 5.8
35ref|NM_176477.1| Drosophila melanogaster midline fasciclin CG335... 40 5.8
36ref|NM_176476.1| Drosophila melanogaster midline fasciclin CG335... 40 5.8
37ref|NM_176475.1| Drosophila melanogaster midline fasciclin CG335... 40 5.8
38ref|NM_176474.1| Drosophila melanogaster midline fasciclin CG335... 40 5.8
39ref|NM_176473.1| Drosophila melanogaster midline fasciclin CG335... 40 5.8
40ref|NM_176472.1| Drosophila melanogaster midline fasciclin CG335... 40 5.8
41ref|NM_176471.1| Drosophila melanogaster midline fasciclin CG335... 40 5.8
42ref|NM_176470.1| Drosophila melanogaster midline fasciclin CG335... 40 5.8
43ref|NM_176469.1| Drosophila melanogaster midline fasciclin CG335... 40 5.8
44ref|NM_176468.1| Drosophila melanogaster midline fasciclin CG335... 40 5.8
45ref|NM_176467.1| Drosophila melanogaster midline fasciclin CG335... 40 5.8
46ref|NM_176466.1| Drosophila melanogaster midline fasciclin CG335... 40 5.8
47ref|NM_169444.1| Drosophila melanogaster midline fasciclin CG335... 40 5.8
48gb|AC018509.6| Homo sapiens chromosome 10 clone RP11-307B23, com... 40 5.8
49ref|NM_079600.2| Drosophila melanogaster midline fasciclin CG335... 40 5.8
50gb|AY069094.1| Drosophila melanogaster GH11519 full length cDNA 40 5.8
51gb|AC084456.1|AC084456 Caenorhabditis briggsae cosmid CB029P18, ... 40 5.8
52gb|AC084447.1|AC084447 Caenorhabditis briggsae cosmid CB019G12, ... 40 5.8
53ref|XM_320392.2| Anopheles gambiae str. PEST ENSANGP00000013949 ... 40 5.8
54gb|AC005720.6|AC005720 Drosophila melanogaster, chromosome 3L, r... 40 5.8
55gb|AE003694.4| Drosophila melanogaster chromosome 3R, section 32... 40 5.8
56gb|AE003599.2| Drosophila melanogaster chromosome 3L, section 80... 40 5.8
57emb|AL732559.9| Mouse DNA sequence from clone RP23-9A5 on chromo... 40 5.8
58emb|AL731709.19| Mouse DNA sequence from clone RP23-316M14 on ch... 40 5.8 
>dbj|AK104076.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-C08, full
            insert sequence
          Length = 1325

 Score =  256 bits (129), Expect = 5e-65
 Identities = 176/192 (91%)
 Strand = Plus / Minus

                                                                        
Query: 240  taggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgt 299
            |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1057 taggtatggcggttggcttcgaatcctcggctttctcatgctccttgtttagcatcttgt 998

                                                                        
Query: 300  tgttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgacca 359
            | |||||||| || ||||| |||||||||||||||||||| ||||||| |||||||||||
Sbjct: 997  tattgatcaagttatggagtgcgatgacactccggataagagaagacaagtatatgacca 938

                                                                        
Query: 360  gcatcatatcatttgttttcactgcanaggccttaatgagctcatttacgttgagattgg 419
             ||||||||| |||||||| |||||| |||| ||||| ||||| ||||| ||||||||||
Sbjct: 937  acatcatatcgtttgttttaactgcaaaggctttaataagctcgtttacattgagattgg 878

                        
Query: 420  ggagcagattaa 431
            ||||||||||||
Sbjct: 877  ggagcagattaa 866



 Score = 46.1 bits (23), Expect = 0.094
 Identities = 48/55 (87%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                   
Query: 45   agctcacagaatgtaaggttttgtcgttgacctcgtcgcacatgaagtaaacatc 99
            |||||||||||||||| | |||| |||||||||  ||| ||||||| ||||||||
Sbjct: 1238 agctcacagaatgtaaag-tttgccgttgaccttatcgtacatgaaataaacatc 1185
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>dbj|AK103551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132F12, full
            insert sequence
          Length = 1431

 Score =  256 bits (129), Expect = 5e-65
 Identities = 176/192 (91%)
 Strand = Plus / Minus

                                                                        
Query: 240  taggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgt 299
            |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1130 taggtatggcggttggcttcgaatcctcggctttctcatgctccttgtttagcatcttgt 1071

                                                                        
Query: 300  tgttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgacca 359
            | |||||||| || ||||| |||||||||||||||||||| ||||||| |||||||||||
Sbjct: 1070 tattgatcaagttatggagtgcgatgacactccggataagagaagacaagtatatgacca 1011

                                                                        
Query: 360  gcatcatatcatttgttttcactgcanaggccttaatgagctcatttacgttgagattgg 419
             ||||||||| |||||||| |||||| |||| ||||| ||||| ||||| ||||||||||
Sbjct: 1010 acatcatatcgtttgttttaactgcaaaggctttaataagctcgtttacattgagattgg 951

                        
Query: 420  ggagcagattaa 431
            ||||||||||||
Sbjct: 950  ggagcagattaa 939



 Score = 46.1 bits (23), Expect = 0.094
 Identities = 48/55 (87%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                   
Query: 45   agctcacagaatgtaaggttttgtcgttgacctcgtcgcacatgaagtaaacatc 99
            |||||||||||||||| | |||| |||||||||  ||| ||||||| ||||||||
Sbjct: 1311 agctcacagaatgtaaag-tttgccgttgaccttatcgtacatgaaataaacatc 1258
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>dbj|AK061835.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-D07, full
            insert sequence
          Length = 1373

 Score =  256 bits (129), Expect = 5e-65
 Identities = 176/192 (91%)
 Strand = Plus / Minus

                                                                        
Query: 240  taggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgt 299
            |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1072 taggtatggcggttggcttcgaatcctcggctttctcatgctccttgtttagcatcttgt 1013

                                                                        
Query: 300  tgttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgacca 359
            | |||||||| || ||||| |||||||||||||||||||| ||||||| |||||||||||
Sbjct: 1012 tattgatcaagttatggagtgcgatgacactccggataagagaagacaagtatatgacca 953

                                                                        
Query: 360  gcatcatatcatttgttttcactgcanaggccttaatgagctcatttacgttgagattgg 419
             ||||||||| |||||||| |||||| |||| ||||| ||||| ||||| ||||||||||
Sbjct: 952  acatcatatcgtttgttttaactgcaaaggctttaataagctcgtttacattgagattgg 893

                        
Query: 420  ggagcagattaa 431
            ||||||||||||
Sbjct: 892  ggagcagattaa 881



 Score = 46.1 bits (23), Expect = 0.094
 Identities = 48/55 (87%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                   
Query: 45   agctcacagaatgtaaggttttgtcgttgacctcgtcgcacatgaagtaaacatc 99
            |||||||||||||||| | |||| |||||||||  ||| ||||||| ||||||||
Sbjct: 1253 agctcacagaatgtaaag-tttgccgttgaccttatcgtacatgaaataaacatc 1200
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>dbj|AB037150.1| Oryza sativa (japonica cultivar-group) OsRPN8 mRNA for 26S proteasome
            regulatory particle non-ATPase subunit8, complete cds
          Length = 1308

 Score =  256 bits (129), Expect = 5e-65
 Identities = 176/192 (91%)
 Strand = Plus / Minus

                                                                        
Query: 240  taggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgt 299
            |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1042 taggtatggcggttggcttcgaatcctcggctttctcatgctccttgtttagcatcttgt 983

                                                                        
Query: 300  tgttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgacca 359
            | |||||||| || ||||| |||||||||||||||||||| ||||||| |||||||||||
Sbjct: 982  tattgatcaagttatggagtgcgatgacactccggataagagaagacaagtatatgacca 923

                                                                        
Query: 360  gcatcatatcatttgttttcactgcanaggccttaatgagctcatttacgttgagattgg 419
             ||||||||| |||||||| |||||| |||| ||||| ||||| ||||| ||||||||||
Sbjct: 922  acatcatatcgtttgttttaactgcaaaggctttaataagctcgtttacattgagattgg 863

                        
Query: 420  ggagcagattaa 431
            ||||||||||||
Sbjct: 862  ggagcagattaa 851



 Score = 46.1 bits (23), Expect = 0.094
 Identities = 48/55 (87%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                   
Query: 45   agctcacagaatgtaaggttttgtcgttgacctcgtcgcacatgaagtaaacatc 99
            |||||||||||||||| | |||| |||||||||  ||| ||||||| ||||||||
Sbjct: 1223 agctcacagaatgtaaag-tttgccgttgaccttatcgtacatgaaataaacatc 1170
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>gb|AY111094.1| Zea mays CL9802_1 mRNA sequence
          Length = 747

 Score =  208 bits (105), Expect = 1e-50
 Identities = 170/192 (88%)
 Strand = Plus / Plus

                                                                       
Query: 220 cgtttagctcccggctgccgtaggtatggcggctggcttcgaatcctcggccttctcatg 279
           ||||||||| ||||| || ||||| ||||||| ||| |||||||||||||||||||| ||
Sbjct: 323 cgtttagcttccggcagcagtaggaatggcggttggtttcgaatcctcggccttctcgtg 382

                                                                       
Query: 280 ctccttgtttagcatcttgttgttgatcaaattgtggagagcgatgacactccggataag 339
           |||||||||||||||||| |||||||| |||||||| || || ||||| |||||||| ||
Sbjct: 383 ctccttgtttagcatcttattgttgattaaattgtgaagcgcaatgacgctccggatcag 442

                                                                       
Query: 340 ggaagacaggtatatgaccagcatcatatcatttgttttcactgcanaggccttaatgag 399
            |||||||||||||| |||| |||||| || ||||||||||||||| |||| ||||| ||
Sbjct: 443 agaagacaggtatatcaccaacatcatgtcgtttgttttcactgcaaaggctttaattag 502

                       
Query: 400 ctcatttacgtt 411
           ||||||||||||
Sbjct: 503 ctcatttacgtt 514
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>gb|AY109022.1| Zea mays PCO082032 mRNA sequence
          Length = 1409

 Score =  208 bits (105), Expect = 1e-50
 Identities = 170/192 (88%)
 Strand = Plus / Minus

                                                                        
Query: 220  cgtttagctcccggctgccgtaggtatggcggctggcttcgaatcctcggccttctcatg 279
            ||||||||| ||||| || ||||| ||||||| ||| |||||||||||||||||||| ||
Sbjct: 1069 cgtttagcttccggcagcagtaggaatggcggttggtttcgaatcctcggccttctcgtg 1010

                                                                        
Query: 280  ctccttgtttagcatcttgttgttgatcaaattgtggagagcgatgacactccggataag 339
            |||||||||||||||||| |||||||| |||||||| || || ||||| |||||||| ||
Sbjct: 1009 ctccttgtttagcatcttattgttgattaaattgtgaagcgcaatgacgctccggatcag 950

                                                                        
Query: 340  ggaagacaggtatatgaccagcatcatatcatttgttttcactgcanaggccttaatgag 399
             |||||||||||||| |||| |||||| || ||||||||||||||| |||| ||||| ||
Sbjct: 949  agaagacaggtatatcaccaacatcatgtcgtttgttttcactgcaaaggctttaattag 890

                        
Query: 400  ctcatttacgtt 411
            ||||||||||||
Sbjct: 889  ctcatttacgtt 878
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>gb|DQ222517.1| Solanum tuberosum clone 119G03 unknown mRNA
          Length = 1191

 Score =  139 bits (70), Expect = 8e-30
 Identities = 115/130 (88%)
 Strand = Plus / Minus

                                                                       
Query: 254 ggcttcgaatcctcggccttctcatgctccttgtttagcatcttgttgttgatcaaattg 313
           |||||||||||||| ||||| || || |||||||| |||||||||||||||||||| || 
Sbjct: 902 ggcttcgaatcctcagccttttcgtgttccttgttaagcatcttgttgttgatcaagtta 843

                                                                       
Query: 314 tggagagcgatgacactccggataagggaagacaggtatatgaccagcatcatatcattt 373
           |||||||| || ||||| |||||||| ||||| || |||||||||| |||||||||||| 
Sbjct: 842 tggagagcaattacacttcggataagtgaagatagatatatgaccaacatcatatcattc 783

                     
Query: 374 gttttcactg 383
           ||||||||||
Sbjct: 782 gttttcactg 773
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>emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K01,
             complete sequence
          Length = 163448

 Score =  109 bits (55), Expect = 8e-21
 Identities = 82/91 (90%)
 Strand = Plus / Minus

                                                                         
Query: 295   cttgttgttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatat 354
             |||||| |||||||| || ||||| |||||||||||||||||||| ||||||| ||||||
Sbjct: 26367 cttgttattgatcaagttatggagtgcgatgacactccggataagagaagacaagtatat 26308

                                            
Query: 355   gaccagcatcatatcatttgttttcactgca 385
             ||||| ||||||||| |||||||| ||||||
Sbjct: 26307 gaccaacatcatatcgtttgttttaactgca 26277



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 55/57 (96%)
 Strand = Plus / Minus

                                                                      
Query: 240   taggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatct 296
             |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 26517 taggtatggcggttggcttcgaatcctcggctttctcatgctccttgtttagcatct 26461



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                
Query: 381   ctgcanaggccttaatgagctcatttacgttgagattggggagcagattaa 431
             ||||| |||| ||||| ||||| ||||| ||||||||||||||||||||||
Sbjct: 26181 ctgcaaaggctttaataagctcgtttacattgagattggggagcagattaa 26131



 Score = 46.1 bits (23), Expect = 0.094
 Identities = 48/55 (87%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                    
Query: 45    agctcacagaatgtaaggttttgtcgttgacctcgtcgcacatgaagtaaacatc 99
             |||||||||||||||| | |||| |||||||||  ||| ||||||| ||||||||
Sbjct: 26698 agctcacagaatgtaaag-tttgccgttgaccttatcgtacatgaaataaacatc 26645
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  109 bits (55), Expect = 8e-21
 Identities = 82/91 (90%)
 Strand = Plus / Minus

                                                                            
Query: 295      cttgttgttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatat 354
                |||||| |||||||| || ||||| |||||||||||||||||||| ||||||| ||||||
Sbjct: 33814468 cttgttattgatcaagttatggagtgcgatgacactccggataagagaagacaagtatat 33814409

                                               
Query: 355      gaccagcatcatatcatttgttttcactgca 385
                ||||| ||||||||| |||||||| ||||||
Sbjct: 33814408 gaccaacatcatatcgtttgttttaactgca 33814378



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 55/57 (96%)
 Strand = Plus / Minus

                                                                         
Query: 240      taggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatct 296
                |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 33814618 taggtatggcggttggcttcgaatcctcggctttctcatgctccttgtttagcatct 33814562



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                   
Query: 381      ctgcanaggccttaatgagctcatttacgttgagattggggagcagattaa 431
                ||||| |||| ||||| ||||| ||||| ||||||||||||||||||||||
Sbjct: 33814282 ctgcaaaggctttaataagctcgtttacattgagattggggagcagattaa 33814232



 Score = 46.1 bits (23), Expect = 0.094
 Identities = 48/55 (87%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                       
Query: 45       agctcacagaatgtaaggttttgtcgttgacctcgtcgcacatgaagtaaacatc 99
                |||||||||||||||| | |||| |||||||||  ||| ||||||| ||||||||
Sbjct: 33814799 agctcacagaatgtaaag-tttgccgttgaccttatcgtacatgaaataaacatc 33814746
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>ref|NM_111962.3| Arabidopsis thaliana unknown protein AT3G11270 mRNA, complete cds
          Length = 1417

 Score =  101 bits (51), Expect = 2e-18
 Identities = 119/142 (83%)
 Strand = Plus / Minus

                                                                        
Query: 254  ggcttcgaatcctcggccttctcatgctccttgtttagcatcttgttgttgatcaaattg 313
            ||||| || ||||| || || ||||| ||||| || | || |||||||||||||||| ||
Sbjct: 1001 ggctttgagtcctctgctttttcatgttccttattcaacaacttgttgttgatcaaactg 942

                                                                        
Query: 314  tggagagcgatgacactccggataagggaagacaggtatatgaccagcatcatatcattt 373
            ||||| ||||| ||||| |||||||| ||||| ||||| || || |||||||| ||||||
Sbjct: 941  tggagggcgattacacttcggataagcgaagaaaggtagattacgagcatcatgtcattt 882

                                  
Query: 374  gttttcactgcanaggccttaa 395
            ||||| |||||| |||| ||||
Sbjct: 881  gtttttactgcaaaggctttaa 860
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>gb|AY258412.1| Arabidopsis thaliana 26S proteasome subunit RPN8b (RPN8b) mRNA,
           partial cds
          Length = 930

 Score =  101 bits (51), Expect = 2e-18
 Identities = 119/142 (83%)
 Strand = Plus / Minus

                                                                       
Query: 254 ggcttcgaatcctcggccttctcatgctccttgtttagcatcttgttgttgatcaaattg 313
           ||||| || ||||| || || ||||| ||||| || | || |||||||||||||||| ||
Sbjct: 902 ggctttgagtcctctgctttttcatgttccttattcaacaacttgttgttgatcaaactg 843

                                                                       
Query: 314 tggagagcgatgacactccggataagggaagacaggtatatgaccagcatcatatcattt 373
           ||||| ||||| ||||| |||||||| ||||| ||||| || || |||||||| ||||||
Sbjct: 842 tggagggcgattacacttcggataagcgaagaaaggtagattacgagcatcatgtcattt 783

                                 
Query: 374 gttttcactgcanaggccttaa 395
           ||||| |||||| |||| ||||
Sbjct: 782 gtttttactgcaaaggctttaa 761
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>gb|AY639600.1| Lycopersicon pimpinellifolium orion Hcr9 gene cluster, complete
             sequence
          Length = 28951

 Score =  101 bits (51), Expect = 2e-18
 Identities = 81/91 (89%)
 Strand = Plus / Minus

                                                                         
Query: 295   cttgttgttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatat 354
             ||||||||||||||| || |||||||| || ||||| |||||||| ||||| || |||||
Sbjct: 28123 cttgttgttgatcaagttatggagagcaattacacttcggataagtgaagatagatatat 28064

                                            
Query: 355   gaccagcatcatatcatttgttttcactgca 385
             ||||| |||||||||||| ||||||||||||
Sbjct: 28063 gaccaacatcatatcattcgttttcactgca 28033
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>gb|AY230839.1| Arabidopsis thaliana 26S proteasome subunit RPN8a (RPN8a) mRNA,
           RPN8a-1 allele, complete cds
          Length = 1314

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 119/143 (83%)
 Strand = Plus / Minus

                                                                       
Query: 241 aggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgtt 300
           |||||||||  | ||||| || ||||| || || ||||| |||||||| || | ||||||
Sbjct: 975 aggtatggccacaggctttgagtcctctgctttttcatgttccttgttcagtaacttgtt 916

                                                                       
Query: 301 gttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgaccag 360
           ||||||||| |||||||| || || ||||||||||| ||||| || || || || || ||
Sbjct: 915 gttgatcaagttgtggagcgcaattacactccggatgagggatgatagatagataacgag 856

                                  
Query: 361 catcatatcatttgttttcactg 383
           |||||| ||||||||||||||||
Sbjct: 855 catcatgtcatttgttttcactg 833
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>gb|AY087393.1| Arabidopsis thaliana clone 34868 mRNA, complete sequence
          Length = 1368

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 119/143 (83%)
 Strand = Plus / Minus

                                                                        
Query: 241  aggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgtt 300
            |||||||||  | ||||| || ||||| || || ||||| |||||||| || | ||||||
Sbjct: 1044 aggtatggccacaggctttgagtcctctgctttttcatgttccttgttcagtaacttgtt 985

                                                                        
Query: 301  gttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgaccag 360
            ||||||||| |||||||| || || ||||||||||| ||||| || || || || || ||
Sbjct: 984  gttgatcaagttgtggagcgcaattacactccggatgagggatgatagatagataacgag 925

                                   
Query: 361  catcatatcatttgttttcactg 383
            |||||| ||||||||||||||||
Sbjct: 924  catcatgtcatttgttttcactg 902
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>gb|U54560.1|ATU54560 Arabidopsis thaliana putative 26S proteasome subunit athMOV34 mRNA,
            complete cds
          Length = 1357

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 119/143 (83%)
 Strand = Plus / Minus

                                                                        
Query: 241  aggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgtt 300
            |||||||||  | ||||| || ||||| || || ||||| |||||||| || | ||||||
Sbjct: 1006 aggtatggccacaggctttgagtcctctgctttttcatgttccttgttcagtaacttgtt 947

                                                                        
Query: 301  gttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgaccag 360
            ||||||||| |||||||| || || ||||||||||| ||||| || || || || || ||
Sbjct: 946  gttgatcaagttgtggagcgcaattacactccggatgagggatgatagatagataacgag 887

                                   
Query: 361  catcatatcatttgttttcactg 383
            |||||| ||||||||||||||||
Sbjct: 886  catcatgtcatttgttttcactg 864
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>gb|AC073395.6|AC073395 Arabidopsis thaliana chromosome 3 BAC F11B9 genomic sequence, complete
             sequence
          Length = 103517

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                         
Query: 295   cttgttgttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatat 354
             |||||||||||||||| ||||||| ||||| ||||| |||||||| ||||| ||||| ||
Sbjct: 68309 cttgttgttgatcaaactgtggagggcgattacacttcggataagcgaagaaaggtagat 68250

                                          
Query: 355   gaccagcatcatatcatttgttttcactg 383
              || |||||||| ||||||||||| ||||
Sbjct: 68249 tacgagcatcatgtcatttgtttttactg 68221
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>ref|NM_120660.2| Arabidopsis thaliana ATHMOV34 AT5G05780 (ATHMOV34) mRNA, complete cds
          Length = 1372

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 116/141 (82%)
 Strand = Plus / Minus

                                                                        
Query: 241  aggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgtt 300
            |||||||||  | ||||| || ||||| || || ||||| |||||||| || | ||||||
Sbjct: 1044 aggtatggccacaggctttgagtcctctgctttttcatgttccttgttcagtaacttgtt 985

                                                                        
Query: 301  gttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgaccag 360
            ||||||||| |||||||| || || |||||||| || ||||| || || || || || ||
Sbjct: 984  gttgatcaagttgtggagcgcaattacactccgaatgagggatgatagatagataacgag 925

                                 
Query: 361  catcatatcatttgttttcac 381
            |||||| ||||||||||||||
Sbjct: 924  catcatgtcatttgttttcac 904
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>gb|AY230840.1| Arabidopsis thaliana 26S proteasome subunit RPN8a (RPN8a) mRNA,
           RPN8a-2 allele, complete cds
          Length = 932

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 116/141 (82%)
 Strand = Plus / Minus

                                                                       
Query: 241 aggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgtt 300
           |||||||||  | ||||| || ||||| || || ||||| |||||||| || | ||||||
Sbjct: 915 aggtatggccacaggctttgagtcctctgctttttcatgttccttgttcagtaacttgtt 856

                                                                       
Query: 301 gttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgaccag 360
           ||||||||| |||||||| || || |||||||| || ||||| || || || || || ||
Sbjct: 855 gttgatcaagttgtggagcgcaattacactccgaatgagggatgatagatagataacgag 796

                                
Query: 361 catcatatcatttgttttcac 381
           |||||| ||||||||||||||
Sbjct: 795 catcatgtcatttgttttcac 775
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>dbj|AK222016.1| Arabidopsis thaliana mRNA for 26S proteasome regulatory subunit
           S12, complete cds, clone: RAFL22-69-D21
          Length = 531

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 116/141 (82%)
 Strand = Plus / Minus

                                                                       
Query: 241 aggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgtt 300
           |||||||||  | ||||| || ||||| || || ||||| |||||||| || | ||||||
Sbjct: 322 aggtatggccacaggctttgagtcctctgctttttcatgttccttgttcagtaacttgtt 263

                                                                       
Query: 301 gttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgaccag 360
           ||||||||| |||||||| || || |||||||| || ||||| || || || || || ||
Sbjct: 262 gttgatcaagttgtggagcgcaattacactccgaatgagggatgatagatagataacgag 203

                                
Query: 361 catcatatcatttgttttcac 381
           |||||| ||||||||||||||
Sbjct: 202 catcatgtcatttgttttcac 182
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>gb|AF378878.1|AF378878 Arabidopsis thaliana AT5g05780/MJJ3_19 mRNA, complete cds
          Length = 1367

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 116/141 (82%)
 Strand = Plus / Minus

                                                                        
Query: 241  aggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgtt 300
            |||||||||  | ||||| || ||||| || || ||||| |||||||| || | ||||||
Sbjct: 1043 aggtatggccacaggctttgagtcctctgctttttcatgttccttgttcagtaacttgtt 984

                                                                        
Query: 301  gttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgaccag 360
            ||||||||| |||||||| || || |||||||| || ||||| || || || || || ||
Sbjct: 983  gttgatcaagttgtggagcgcaattacactccgaatgagggatgatagatagataacgag 924

                                 
Query: 361  catcatatcatttgttttcac 381
            |||||| ||||||||||||||
Sbjct: 923  catcatgtcatttgttttcac 903
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>emb|BX830010.1|CNS0A09A Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB52ZG12 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1302

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 116/141 (82%)
 Strand = Plus / Minus

                                                                        
Query: 241  aggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgtt 300
            |||||||||  | ||||| || ||||| || || ||||| |||||||| || | ||||||
Sbjct: 1023 aggtatggccacaggctttgagtcctctgctttttcatgttccttgttcagtaacttgtt 964

                                                                        
Query: 301  gttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgaccag 360
            ||||||||| |||||||| || || |||||||| || ||||| || || || || || ||
Sbjct: 963  gttgatcaagttgtggagcgcaattacactccgaatgagggatgatagatagataacgag 904

                                 
Query: 361  catcatatcatttgttttcac 381
            |||||| ||||||||||||||
Sbjct: 903  catcatgtcatttgttttcac 883
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>gb|BT002610.1| Arabidopsis thaliana At5g05780/MJJ3_19 mRNA, complete cds
          Length = 927

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 116/141 (82%)
 Strand = Plus / Minus

                                                                       
Query: 241 aggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgtt 300
           |||||||||  | ||||| || ||||| || || ||||| |||||||| || | ||||||
Sbjct: 915 aggtatggccacaggctttgagtcctctgctttttcatgttccttgttcagtaacttgtt 856

                                                                       
Query: 301 gttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgaccag 360
           ||||||||| |||||||| || || |||||||| || ||||| || || || || || ||
Sbjct: 855 gttgatcaagttgtggagcgcaattacactccgaatgagggatgatagatagataacgag 796

                                
Query: 361 catcatatcatttgttttcac 381
           |||||| ||||||||||||||
Sbjct: 795 catcatgtcatttgttttcac 775
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>emb|BX833880.1|CNS09Z77 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL81ZD09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1265

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 90/107 (84%)
 Strand = Plus / Minus

                                                                       
Query: 275 tcatgctccttgtttagcatcttgttgttgatcaaattgtggagagcgatgacactccgg 334
           ||||| |||||||| || | ||||||||||||||| |||||||| || || |||||||| 
Sbjct: 986 tcatgttccttgttcagtaacttgttgttgatcaagttgtggagcgcaattacactccga 927

                                                          
Query: 335 ataagggaagacaggtatatgaccagcatcatatcatttgttttcac 381
           || ||||| || || || || || |||||||| ||||||||||||||
Sbjct: 926 atgagggatgatagatagataacgagcatcatgtcatttgttttcac 880
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>dbj|AB005237.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJJ3
          Length = 87835

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 78/91 (85%)
 Strand = Plus / Minus

                                                                         
Query: 295   cttgttgttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatat 354
             ||||||||||||||| |||||||| || || |||||||| || ||||| || || || ||
Sbjct: 58752 cttgttgttgatcaagttgtggagcgcaattacactccgaatgagggatgatagatagat 58693

                                            
Query: 355   gaccagcatcatatcatttgttttcactgca 385
              || |||||||| ||||||||||||||||||
Sbjct: 58692 aacgagcatcatgtcatttgttttcactgca 58662
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>ref|XM_804367.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053503593.30) partial mRNA
          Length = 2574

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 269 gccttctcatgctccttgttta 290
           ||||||||||||||||||||||
Sbjct: 992 gccttctcatgctccttgttta 971
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>ref|XM_811105.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053506127.150) partial mRNA
          Length = 2574

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 269 gccttctcatgctccttgttta 290
           ||||||||||||||||||||||
Sbjct: 992 gccttctcatgctccttgttta 971
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>ref|XM_749538.1| Aspergillus fumigatus Af293 nuclear exosome complex 3'-5'
           exonuclease subunit (Afu3g09880) partial mRNA
          Length = 2295

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 63  ttttgtcgttgacctcgtcgc 83
           |||||||||||||||||||||
Sbjct: 161 ttttgtcgttgacctcgtcgc 181
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>ref|XM_638353.1| Dictyostelium discoideum hypothetical protein (DDB0202525), partial
            mRNA
          Length = 2580

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 284  ttgtttagcatcttgttgttgatc 307
            ||||||| ||||||||||||||||
Sbjct: 1212 ttgtttatcatcttgttgttgatc 1189
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>gb|AC007889.9| Drosophila melanogaster clone BACR48E12, complete sequence
          Length = 182182

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   tgtccacggtttcttctgcc 171
             ||||||||||||||||||||
Sbjct: 83054 tgtccacggtttcttctgcc 83073
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>gb|AC007692.5| Drosophila melanogaster clone BACR06O05, complete sequence
          Length = 184662

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 152 tgtccacggtttcttctgcc 171
           ||||||||||||||||||||
Sbjct: 517 tgtccacggtttcttctgcc 536
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>gb|AC138228.10| Mus musculus chromosome 17, clone RP23-304G12, complete sequence
          Length = 225739

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 161    tttcttctgcccgtgctggg 180
              ||||||||||||||||||||
Sbjct: 220053 tttcttctgcccgtgctggg 220072
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>gb|AC166654.1| Mus musculus BAC clone RP23-426B21 from chromosome 17, complete
             sequence
          Length = 185609

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   tttcttctgcccgtgctggg 180
             ||||||||||||||||||||
Sbjct: 77390 tttcttctgcccgtgctggg 77409
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>gb|AF038842.1| Drosophila melanogaster midline fasciclin precursor (mfas) mRNA,
           complete cds
          Length = 2967

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 152 tgtccacggtttcttctgcc 171
           ||||||||||||||||||||
Sbjct: 785 tgtccacggtttcttctgcc 766
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>ref|NM_176478.1| Drosophila melanogaster midline fasciclin CG3359-RJ, transcript
           variant J (mfas), mRNA
          Length = 2962

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 152 tgtccacggtttcttctgcc 171
           ||||||||||||||||||||
Sbjct: 780 tgtccacggtttcttctgcc 761
to top
>ref|NM_176477.1| Drosophila melanogaster midline fasciclin CG3359-RM, transcript
           variant M (mfas), mRNA
          Length = 2789

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 152 tgtccacggtttcttctgcc 171
           ||||||||||||||||||||
Sbjct: 607 tgtccacggtttcttctgcc 588
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>ref|NM_176476.1| Drosophila melanogaster midline fasciclin CG3359-RG, transcript
           variant G (mfas), mRNA
          Length = 2767

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 152 tgtccacggtttcttctgcc 171
           ||||||||||||||||||||
Sbjct: 585 tgtccacggtttcttctgcc 566
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>ref|NM_176475.1| Drosophila melanogaster midline fasciclin CG3359-RF, transcript
           variant F (mfas), mRNA
          Length = 3163

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 152 tgtccacggtttcttctgcc 171
           ||||||||||||||||||||
Sbjct: 981 tgtccacggtttcttctgcc 962
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>ref|NM_176474.1| Drosophila melanogaster midline fasciclin CG3359-RO, transcript
           variant O (mfas), mRNA
          Length = 2764

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 152 tgtccacggtttcttctgcc 171
           ||||||||||||||||||||
Sbjct: 582 tgtccacggtttcttctgcc 563
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>ref|NM_176473.1| Drosophila melanogaster midline fasciclin CG3359-RE, transcript
           variant E (mfas), mRNA
          Length = 2786

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 152 tgtccacggtttcttctgcc 171
           ||||||||||||||||||||
Sbjct: 604 tgtccacggtttcttctgcc 585
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>ref|NM_176472.1| Drosophila melanogaster midline fasciclin CG3359-RK, transcript
           variant K (mfas), mRNA
          Length = 2912

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 152 tgtccacggtttcttctgcc 171
           ||||||||||||||||||||
Sbjct: 730 tgtccacggtttcttctgcc 711
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>ref|NM_176471.1| Drosophila melanogaster midline fasciclin CG3359-RI, transcript
           variant I (mfas), mRNA
          Length = 2890

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 152 tgtccacggtttcttctgcc 171
           ||||||||||||||||||||
Sbjct: 708 tgtccacggtttcttctgcc 689
to top
>ref|NM_176470.1| Drosophila melanogaster midline fasciclin CG3359-RP, transcript
           variant P (mfas), mRNA
          Length = 2717

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 152 tgtccacggtttcttctgcc 171
           ||||||||||||||||||||
Sbjct: 535 tgtccacggtttcttctgcc 516
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>ref|NM_176469.1| Drosophila melanogaster midline fasciclin CG3359-RL, transcript
           variant L (mfas), mRNA
          Length = 2771

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 152 tgtccacggtttcttctgcc 171
           ||||||||||||||||||||
Sbjct: 589 tgtccacggtttcttctgcc 570
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>ref|NM_176468.1| Drosophila melanogaster midline fasciclin CG3359-RD, transcript
           variant D (mfas), mRNA
          Length = 3091

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 152 tgtccacggtttcttctgcc 171
           ||||||||||||||||||||
Sbjct: 909 tgtccacggtttcttctgcc 890
to top
>ref|NM_176467.1| Drosophila melanogaster midline fasciclin CG3359-RN, transcript
           variant N (mfas), mRNA
          Length = 2692

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 152 tgtccacggtttcttctgcc 171
           ||||||||||||||||||||
Sbjct: 510 tgtccacggtttcttctgcc 491
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>ref|NM_176466.1| Drosophila melanogaster midline fasciclin CG3359-RH, transcript
           variant H (mfas), mRNA
          Length = 2714

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 152 tgtccacggtttcttctgcc 171
           ||||||||||||||||||||
Sbjct: 532 tgtccacggtttcttctgcc 513
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>ref|NM_169444.1| Drosophila melanogaster midline fasciclin CG3359-RB, transcript
           variant B (mfas), mRNA
          Length = 2695

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 152 tgtccacggtttcttctgcc 171
           ||||||||||||||||||||
Sbjct: 513 tgtccacggtttcttctgcc 494
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>gb|AC018509.6| Homo sapiens chromosome 10 clone RP11-307B23, complete sequence
          Length = 162877

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 42     tagagctcacagaatgtaag 61
              ||||||||||||||||||||
Sbjct: 120164 tagagctcacagaatgtaag 120145
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>ref|NM_079600.2| Drosophila melanogaster midline fasciclin CG3359-RC, transcript
           variant C (mfas), mRNA
          Length = 2966

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 152 tgtccacggtttcttctgcc 171
           ||||||||||||||||||||
Sbjct: 784 tgtccacggtttcttctgcc 765
to top
>gb|AY069094.1| Drosophila melanogaster GH11519 full length cDNA
          Length = 2695

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 152 tgtccacggtttcttctgcc 171
           ||||||||||||||||||||
Sbjct: 495 tgtccacggtttcttctgcc 476
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>gb|AC084456.1|AC084456 Caenorhabditis briggsae cosmid CB029P18, complete sequence
          Length = 87408

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 354 tgaccagcatcatatcatttgttt 377
           |||| |||||||||||||||||||
Sbjct: 44  tgacgagcatcatatcatttgttt 21
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>gb|AC084447.1|AC084447 Caenorhabditis briggsae cosmid CB019G12, complete sequence
          Length = 88839

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 354   tgaccagcatcatatcatttgttt 377
             |||| |||||||||||||||||||
Sbjct: 88650 tgacgagcatcatatcatttgttt 88627
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>ref|XM_320392.2| Anopheles gambiae str. PEST ENSANGP00000013949
           (ENSANGG00000011460), partial mRNA
          Length = 977

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 295 cttgttgttgatcaaattgtggagagcgatga 326
           |||||||||||||| |||||| || |||||||
Sbjct: 968 cttgttgttgatcagattgtgcagcgcgatga 937
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>gb|AC005720.6|AC005720 Drosophila melanogaster, chromosome 3L, region 79F1-80A2, BAC clone
              BACR48E05, complete sequence
          Length = 190390

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 322    gatgacactccggataaggg 341
              ||||||||||||||||||||
Sbjct: 132453 gatgacactccggataaggg 132434
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>gb|AE003694.4| Drosophila melanogaster chromosome 3R, section 32 of 118 of the
            complete sequence
          Length = 226075

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 152  tgtccacggtttcttctgcc 171
            ||||||||||||||||||||
Sbjct: 9478 tgtccacggtttcttctgcc 9497
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>gb|AE003599.2| Drosophila melanogaster chromosome 3L, section 80 of 83 of the complete
              sequence
          Length = 250029

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 322    gatgacactccggataaggg 341
              ||||||||||||||||||||
Sbjct: 103841 gatgacactccggataaggg 103860
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>emb|AL732559.9| Mouse DNA sequence from clone RP23-9A5 on chromosome 2, complete
            sequence
          Length = 167364

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 280  ctccttgtttagcatcttgt 299
            ||||||||||||||||||||
Sbjct: 6980 ctccttgtttagcatcttgt 6999
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>emb|AL731709.19| Mouse DNA sequence from clone RP23-316M14 on chromosome 2, complete
             sequence
          Length = 211034

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 108   aattgaaggtcaagacacttggta 131
             ||||||| ||||||||||||||||
Sbjct: 51067 aattgaaagtcaagacacttggta 51044


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,051,041
Number of Sequences: 3902068
Number of extensions: 3051041
Number of successful extensions: 54356
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54252
Number of HSP's gapped (non-prelim): 104
length of query: 431
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 409
effective length of database: 17,147,199,772
effective search space: 7013204706748
effective search space used: 7013204706748
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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