ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart09b09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT017943.1| Zea mays clone EL01N0521C09.c mRNA sequence 44 0.18
2emb|AL928651.13| Mouse DNA sequence from clone RP23-167A19 on ch... 44 0.18
3gb|AC109205.12| Mus musculus chromosome 7, clone RP23-137A4, com... 42 0.72
4gb|AC141898.3| Mus musculus BAC clone RP23-155I18 from chromosom... 42 0.72
5gb|AC100708.10| Mus musculus chromosome 10, clone RP23-169I18, c... 42 0.72
6gb|AC115940.11| Mus musculus chromosome 5, clone RP24-553D12, co... 42 0.72
7gb|AC116593.4| Mus musculus BAC clone RP24-91C7 from chromosome ... 42 0.72
8gb|AC118009.7| Mus musculus chromosome 8, clone RP23-442H2, comp... 42 0.72
9gb|AC127275.4| Mus musculus BAC clone RP24-207I8 from chromosome... 42 0.72
10gb|AC164623.4| Mus musculus 10 BAC RP24-401L24 (Roswell Park Can... 42 0.72
11dbj|AK140018.1| Mus musculus adult male corpora quadrigemina cDN... 42 0.72
12dbj|AK043209.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 42 0.72
13gb|AC008491.6|AC008491 Homo sapiens chromosome 5 clone CTC-426L2... 42 0.72
14gb|AC006717.1| Caenorhabditis elegans cosmid Y14H12A, complete s... 42 0.72
15gb|AC010315.6|AC010315 Homo sapiens chromosome 5 clone CTB-84H20... 42 0.72
16gb|AC162176.2| Mus musculus BAC clone RP24-446P15 from chromosom... 40 2.8
17gb|AC166051.5| Mus musculus BAC clone RP24-166B2 from chromosome... 40 2.8
18gb|AC115818.9| Mus musculus chromosome 1, clone RP23-433A12, com... 40 2.8
19gb|AC125221.4| Mus musculus BAC clone RP23-74N13 from chromosome... 40 2.8
20ref|XM_717305.1| Candida albicans SC5314 hypothetical protein (C... 40 2.8
21emb|CT025610.7| Mouse DNA sequence from clone RP23-430J15 on chr... 40 2.8
22gb|AC129179.3| Mus musculus BAC clone RP23-240C24 from chromosom... 40 2.8
23gb|AC123926.4| Mus musculus BAC clone RP24-326N11 from chromosom... 40 2.8
24gb|AC124403.3| Mus musculus BAC clone RP24-369I6 from chromosome... 40 2.8
25gb|AC126796.4| Mus musculus BAC clone RP23-384F19 from chromosom... 40 2.8
26ref|XM_947837.1| Theileria annulata strain Ankara hypothetical p... 40 2.8
27gb|AC153663.6| Mus musculus BAC clone RP23-12J8 from chromosome ... 40 2.8
28gb|CP000107.1| Ehrlichia canis str. Jake, complete genome 40 2.8
29emb|AL392083.17| Human DNA sequence from clone RP11-29A19 on chr... 40 2.8
30emb|AL445255.8| Human DNA sequence from clone RP11-89A14 on chro... 40 2.8
31emb|AL360083.27| Human DNA sequence from clone RP11-2K17 on chro... 40 2.8
32emb|AL162419.34| Human DNA sequence from clone RP11-358M14 on ch... 40 2.8
33emb|AL162400.11| Human DNA sequence from clone RP11-5P4 on chrom... 40 2.8
34gb|AC157787.6| Mus musculus chromosome 1, clone RP23-158A6, comp... 40 2.8
35gb|AC165148.2| Mus musculus BAC clone RP24-278K24 from chromosom... 40 2.8
36emb|AL161501.2|ATCHRIV13 Arabidopsis thaliana DNA chromosome 4, ... 40 2.8
37emb|BX569794.8| Zebrafish DNA sequence from clone DKEYP-15B2 in ... 40 2.8
38gb|BC090822.1| Danio rerio zgc:101633, mRNA (cDNA clone MGC:1016... 40 2.8
39emb|BX571792.9| Zebrafish DNA sequence from clone CH211-177D9 in... 40 2.8
40dbj|AP003707.4| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
41gb|AC092993.3| Homo sapiens 3 BAC RP11-649C16 (Roswell Park Canc... 40 2.8
42gb|AC010310.5| Homo sapiens chromosome 5 clone CTB-55B8, complet... 40 2.8
43emb|BX005461.8| Zebrafish DNA sequence from clone DKEY-192L18 in... 40 2.8
44gb|AC010607.8| Homo sapiens chromosome 5 clone CTB-28D11, comple... 40 2.8
45gb|AC156021.2| Mus musculus BAC clone RP23-256A5 from chromosome... 40 2.8
46gb|AC154693.2| Mus musculus BAC clone RP24-340P22 from chromosom... 40 2.8
47ref|NM_001013539.1| Danio rerio zgc:101633 (zgc:101633), mRNA 40 2.8
48dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
49gb|AC109614.9| Mus musculus chromosome 5, clone RP23-107M21, com... 40 2.8
50gb|AC155644.7| Mus musculus 10 BAC RP24-435P22 (Roswell Park Can... 40 2.8
51gb|AC017020.4|AC017020 Homo sapiens BAC clone RP11-185K15 from Y... 40 2.8
52dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
53gb|AC092093.34| Mus musculus strain C57BL/6J chromosome 10 clone... 40 2.8
54gb|AC138974.2| Homo sapiens 3 BAC RP11-54A6 (Roswell Park Cancer... 40 2.8
55emb|AL840630.16| Zebrafish DNA sequence from clone CH211-279L11 ... 40 2.8
56dbj|AP006165.2| Oryza sativa (japonica cultivar-group) genomic D... 40 2.8
57emb|BX890562.8| Zebrafish DNA sequence from clone CH211-222H17 i... 40 2.8
58emb|BX088722.8| Zebrafish DNA sequence from clone CH211-253P18 i... 40 2.8
59gb|AF149414.1|T19J18 Arabidopsis thaliana BAC T19J18 40 2.8
60gb|AC132587.5| Mus musculus BAC clone RP24-372N16 from 12, compl... 40 2.8
61gb|AC122504.4| Mus musculus BAC clone RP24-419J13 from 9, comple... 40 2.8
62emb|CT010501.6| Mouse DNA sequence from clone RP23-333D13 on chr... 40 2.8
63emb|AL772353.9| Mouse DNA sequence from clone RP23-390I8 on chro... 40 2.8
64dbj|AP007295.1| Lotus japonicus genomic DNA, clone:LjT33A04, TM0... 40 2.8
65emb|AL390254.6|CNS06C7M Human chromosome 14 DNA sequence BAC R-9... 40 2.8
66emb|AL354805.23| Mouse DNA sequence from clone RP21-544J17 on ch... 40 2.8
67emb|AL669982.10| Mouse DNA sequence from clone RP23-297N24 on ch... 40 2.8 
>gb|BT017943.1| Zea mays clone EL01N0521C09.c mRNA sequence
          Length = 1203

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 123  aggtacaaaatggaactagtctactt 148
            |||||||||| |||||||||||||||
Sbjct: 1031 aggtacaaaaaggaactagtctactt 1006
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>emb|AL928651.13| Mouse DNA sequence from clone RP23-167A19 on chromosome 4 Contains a
             3-hydroxyisobutyrate dehydrogenase, mitochondrial
             precursor (Hibadh) pseudogene and a CpG island, complete
             sequence
          Length = 157883

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 40    gtttgtttgtttgtttaccgcaggtgaaat 69
             ||||||||||||||||| | ||||||||||
Sbjct: 31919 gtttgtttgtttgtttaacacaggtgaaat 31890
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>gb|AC109205.12| Mus musculus chromosome 7, clone RP23-137A4, complete sequence
          Length = 225302

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 35     gcatcgtttgtttgtttgttt 55
              |||||||||||||||||||||
Sbjct: 151589 gcatcgtttgtttgtttgttt 151609
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>gb|AC141898.3| Mus musculus BAC clone RP23-155I18 from chromosome 5, complete sequence
          Length = 232201

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 35     gcatcgtttgtttgtttgttt 55
              |||||||||||||||||||||
Sbjct: 206381 gcatcgtttgtttgtttgttt 206401
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>gb|AC100708.10| Mus musculus chromosome 10, clone RP23-169I18, complete sequence
          Length = 196776

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 35     gcatcgtttgtttgtttgttt 55
              |||||||||||||||||||||
Sbjct: 129681 gcatcgtttgtttgtttgttt 129661
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>gb|AC115940.11| Mus musculus chromosome 5, clone RP24-553D12, complete sequence
          Length = 189685

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 35     gcatcgtttgtttgtttgttt 55
              |||||||||||||||||||||
Sbjct: 102055 gcatcgtttgtttgtttgttt 102035
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>gb|AC116593.4| Mus musculus BAC clone RP24-91C7 from chromosome 8, complete sequence
          Length = 174603

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 35     gcatcgtttgtttgtttgttt 55
              |||||||||||||||||||||
Sbjct: 151740 gcatcgtttgtttgtttgttt 151720
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>gb|AC118009.7| Mus musculus chromosome 8, clone RP23-442H2, complete sequence
          Length = 208458

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 35     gcatcgtttgtttgtttgttt 55
              |||||||||||||||||||||
Sbjct: 177494 gcatcgtttgtttgtttgttt 177514
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>gb|AC127275.4| Mus musculus BAC clone RP24-207I8 from chromosome 5, complete sequence
          Length = 180919

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 35     gcatcgtttgtttgtttgttt 55
              |||||||||||||||||||||
Sbjct: 176987 gcatcgtttgtttgtttgttt 176967
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>gb|AC164623.4| Mus musculus 10 BAC RP24-401L24 (Roswell Park Cancer Institute
            (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 172657

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 35   gcatcgtttgtttgtttgttt 55
            |||||||||||||||||||||
Sbjct: 8239 gcatcgtttgtttgtttgttt 8219
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>dbj|AK140018.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length
            enriched library, clone:B230039L10 product:gene model
            169, (NCBI), full insert sequence
          Length = 2136

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 35   gcatcgtttgtttgtttgttt 55
            |||||||||||||||||||||
Sbjct: 1395 gcatcgtttgtttgtttgttt 1415
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>dbj|AK043209.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:A730070N12
            product:unclassifiable, full insert sequence
          Length = 1890

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 35   gcatcgtttgtttgtttgttt 55
            |||||||||||||||||||||
Sbjct: 1833 gcatcgtttgtttgtttgttt 1853
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>gb|AC008491.6|AC008491 Homo sapiens chromosome 5 clone CTC-426L22, complete sequence
          Length = 143661

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 35    gcatcgtttgtttgtttgttt 55
             |||||||||||||||||||||
Sbjct: 88662 gcatcgtttgtttgtttgttt 88642
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>gb|AC006717.1| Caenorhabditis elegans cosmid Y14H12A, complete sequence
          Length = 27722

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 36    catcgtttgtttgtttgttta 56
             |||||||||||||||||||||
Sbjct: 12872 catcgtttgtttgtttgttta 12892
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>gb|AC010315.6|AC010315 Homo sapiens chromosome 5 clone CTB-84H20, complete sequence
          Length = 65705

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 35    gcatcgtttgtttgtttgttt 55
             |||||||||||||||||||||
Sbjct: 30655 gcatcgtttgtttgtttgttt 30635
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>gb|AC162176.2| Mus musculus BAC clone RP24-446P15 from chromosome 9, complete sequence
          Length = 204098

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    catcgtttgtttgtttgttt 55
             ||||||||||||||||||||
Sbjct: 21930 catcgtttgtttgtttgttt 21949
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>gb|AC166051.5| Mus musculus BAC clone RP24-166B2 from chromosome 9, complete sequence
          Length = 152610

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    catcgtttgtttgtttgttt 55
             ||||||||||||||||||||
Sbjct: 55492 catcgtttgtttgtttgttt 55511
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>gb|AC115818.9| Mus musculus chromosome 1, clone RP23-433A12, complete sequence
          Length = 186895

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     catcgtttgtttgtttgttt 55
              ||||||||||||||||||||
Sbjct: 102162 catcgtttgtttgtttgttt 102143
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>gb|AC125221.4| Mus musculus BAC clone RP23-74N13 from chromosome 7, complete sequence
          Length = 215384

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    cgtttgtttgtttgtttacc 58
             ||||||||||||||||||||
Sbjct: 43117 cgtttgtttgtttgtttacc 43136
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>ref|XM_717305.1| Candida albicans SC5314 hypothetical protein (CaO19_9063), mRNA
          Length = 330

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 38 tcgtttgtttgtttgtttac 57
          ||||||||||||||||||||
Sbjct: 74 tcgtttgtttgtttgtttac 93
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>emb|CT025610.7| Mouse DNA sequence from clone RP23-430J15 on chromosome 13, complete
              sequence
          Length = 210718

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     tttgtttgtttgtttaccgc 60
              ||||||||||||||||||||
Sbjct: 112128 tttgtttgtttgtttaccgc 112109
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>gb|AC129179.3| Mus musculus BAC clone RP23-240C24 from chromosome 18, complete
             sequence
          Length = 208462

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    catcgtttgtttgtttgttt 55
             ||||||||||||||||||||
Sbjct: 40518 catcgtttgtttgtttgttt 40537
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>gb|AC123926.4| Mus musculus BAC clone RP24-326N11 from chromosome 16, complete
             sequence
          Length = 148820

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    catcgtttgtttgtttgttt 55
             ||||||||||||||||||||
Sbjct: 41006 catcgtttgtttgtttgttt 40987
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>gb|AC124403.3| Mus musculus BAC clone RP24-369I6 from chromosome 16, complete sequence
          Length = 159138

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     catcgtttgtttgtttgttt 55
              ||||||||||||||||||||
Sbjct: 150247 catcgtttgtttgtttgttt 150228
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>gb|AC126796.4| Mus musculus BAC clone RP23-384F19 from chromosome 10, complete
             sequence
          Length = 211025

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    tcgtttgtttgtttgtttac 57
             ||||||||||||||||||||
Sbjct: 71997 tcgtttgtttgtttgtttac 71978
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>ref|XM_947837.1| Theileria annulata strain Ankara hypothetical protein (TA07500)
            partial mRNA
          Length = 2493

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   ttggacttgctgaacctcct 118
            ||||||||||||||||||||
Sbjct: 2430 ttggacttgctgaacctcct 2411
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>gb|AC153663.6| Mus musculus BAC clone RP23-12J8 from chromosome 12, complete
            sequence
          Length = 248166

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 36   catcgtttgtttgtttgttt 55
            ||||||||||||||||||||
Sbjct: 9554 catcgtttgtttgtttgttt 9573
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>gb|CP000107.1| Ehrlichia canis str. Jake, complete genome
          Length = 1315030

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     aaacaacataccaaatgaat 98
              ||||||||||||||||||||
Sbjct: 784476 aaacaacataccaaatgaat 784495
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>emb|AL392083.17| Human DNA sequence from clone RP11-29A19 on chromosome 10 Contains the 3'
              end of the gene for double-stranded RNA specific adenosine
              deaminase (ADAR3) (FLJ30545 FLJ25034 FLJ36975) and three
              CpG islands, complete sequence
          Length = 164741

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 32     atggcatcgtttgtttgtttgttt 55
              |||||||| |||||||||||||||
Sbjct: 105468 atggcatcatttgtttgtttgttt 105491
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>emb|AL445255.8| Human DNA sequence from clone RP11-89A14 on chromosome 13, complete
              sequence
          Length = 165011

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     tttgtttgtttgtttaccgc 60
              ||||||||||||||||||||
Sbjct: 149038 tttgtttgtttgtttaccgc 149019
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>emb|AL360083.27| Human DNA sequence from clone RP11-2K17 on chromosome 10 Contains the
             3' end of the gene for suppressor of variegation 3-9
             (Drosophila) homolog 2; hypothetical protein FLJ23414
             (SUV39H2)(FLJ23414), the DCLRE1C gene for DNA cross-link
             repair 1C (PSO2 homolog, S.cerevisiae) (SCIDA, SNM1C,
             ARTEMIS, RS-SCID,DCLREC1C, FLJ11360), the gene for a novel
             protein similar to mouse Meig1 (Meg1)(meiosis expressed
             gene 1), a novel gene, a seven transmembrane receptor
             (Rhodopsin family) pseudogene and two CpG islands,
             complete sequence
          Length = 94963

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     aagttcaaacttgcattggt 22
             ||||||||||||||||||||
Sbjct: 68328 aagttcaaacttgcattggt 68347
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>emb|AL162419.34| Human DNA sequence from clone RP11-358M14 on chromosome 9 Contains the 5'
              end of a variant of a novel gene (FLJ90578) and a CpG
              island, complete sequence
          Length = 174535

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     gaatttggacttgctgaacc 114
              ||||||||||||||||||||
Sbjct: 148814 gaatttggacttgctgaacc 148833
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>emb|AL162400.11| Human DNA sequence from clone RP11-5P4 on chromosome 1p31.3-32.3
             Contains three novel genes, complete sequence
          Length = 117840

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    catcgtttgtttgtttgttt 55
             ||||||||||||||||||||
Sbjct: 62492 catcgtttgtttgtttgttt 62473
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>gb|AC157787.6| Mus musculus chromosome 1, clone RP23-158A6, complete sequence
          Length = 199981

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    catcgtttgtttgtttgttt 55
             ||||||||||||||||||||
Sbjct: 55913 catcgtttgtttgtttgttt 55932
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>gb|AC165148.2| Mus musculus BAC clone RP24-278K24 from chromosome 14, complete
             sequence
          Length = 197531

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    gtttgtttgtttgtttaccg 59
             ||||||||||||||||||||
Sbjct: 26631 gtttgtttgtttgtttaccg 26650
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>emb|AL161501.2|ATCHRIV13 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 13
          Length = 200001

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 40    gtttgtttgtttgtttaccgcagg 63
             ||||||||||||||| ||||||||
Sbjct: 76608 gtttgtttgtttgttcaccgcagg 76585
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>emb|BX569794.8| Zebrafish DNA sequence from clone DKEYP-15B2 in linkage group 6,
             complete sequence
          Length = 162388

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    catcgtttgtttgtttgttt 55
             ||||||||||||||||||||
Sbjct: 11196 catcgtttgtttgtttgttt 11215
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>gb|BC090822.1| Danio rerio zgc:101633, mRNA (cDNA clone MGC:101633 IMAGE:7225548),
            complete cds
          Length = 1676

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 40   gtttgtttgtttgtttaccg 59
            ||||||||||||||||||||
Sbjct: 1408 gtttgtttgtttgtttaccg 1427
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>emb|BX571792.9| Zebrafish DNA sequence from clone CH211-177D9 in linkage group 12,
             complete sequence
          Length = 141671

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    atcgtttgtttgtttgttta 56
             ||||||||||||||||||||
Sbjct: 69506 atcgtttgtttgtttgttta 69487
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>dbj|AP003707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1485_B09
          Length = 66599

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    gcatcgtttgtttgtttgtt 54
             ||||||||||||||||||||
Sbjct: 52865 gcatcgtttgtttgtttgtt 52846
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>gb|AC092993.3| Homo sapiens 3 BAC RP11-649C16 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 147859

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 183  ttgccaatacagaccatcattcat 206
            ||||||||| ||||||||||||||
Sbjct: 3697 ttgccaatatagaccatcattcat 3674
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>gb|AC010310.5| Homo sapiens chromosome 5 clone CTB-55B8, complete sequence
          Length = 243558

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 32     atggcatcgtttgtttgtttgttt 55
              |||||||| |||||||||||||||
Sbjct: 219550 atggcatcttttgtttgtttgttt 219527
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>emb|BX005461.8| Zebrafish DNA sequence from clone DKEY-192L18 in linkage group 24,
              complete sequence
          Length = 162216

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 38     tcgtttgtttgtttgtttaccgca 61
              ||||||||||||||||||| ||||
Sbjct: 126048 tcgtttgtttgtttgtttagcgca 126071
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>gb|AC010607.8| Homo sapiens chromosome 5 clone CTB-28D11, complete sequence
          Length = 131098

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 32    atggcatcgtttgtttgtttgttt 55
             |||||||| |||||||||||||||
Sbjct: 34249 atggcatcttttgtttgtttgttt 34226
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>gb|AC156021.2| Mus musculus BAC clone RP23-256A5 from chromosome 5, complete sequence
          Length = 217987

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     catcgtttgtttgtttgttt 55
              ||||||||||||||||||||
Sbjct: 183214 catcgtttgtttgtttgttt 183233
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>gb|AC154693.2| Mus musculus BAC clone RP24-340P22 from chromosome 14, complete
            sequence
          Length = 182996

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 40   gtttgtttgtttgtttaccg 59
            ||||||||||||||||||||
Sbjct: 5630 gtttgtttgtttgtttaccg 5611
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>ref|NM_001013539.1| Danio rerio zgc:101633 (zgc:101633), mRNA
          Length = 1676

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 40   gtttgtttgtttgtttaccg 59
            ||||||||||||||||||||
Sbjct: 1408 gtttgtttgtttgtttaccg 1427
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 35       gcatcgtttgtttgtttgtt 54
                ||||||||||||||||||||
Sbjct: 40253913 gcatcgtttgtttgtttgtt 40253894
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>gb|AC109614.9| Mus musculus chromosome 5, clone RP23-107M21, complete sequence
          Length = 194308

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    catcgtttgtttgtttgttt 55
             ||||||||||||||||||||
Sbjct: 44371 catcgtttgtttgtttgttt 44352
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>gb|AC155644.7| Mus musculus 10 BAC RP24-435P22 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 161533

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     catcgtttgtttgtttgttt 55
              ||||||||||||||||||||
Sbjct: 122968 catcgtttgtttgtttgttt 122987
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>gb|AC017020.4|AC017020 Homo sapiens BAC clone RP11-185K15 from Y, complete sequence
          Length = 166403

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 32     atggcatcgtttgtttgtttgttt 55
              ||||||| ||||||||||||||||
Sbjct: 139761 atggcattgtttgtttgtttgttt 139738
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>dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1793G04
          Length = 156714

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     gcatcgtttgtttgtttgtt 54
              ||||||||||||||||||||
Sbjct: 119691 gcatcgtttgtttgtttgtt 119672
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>gb|AC092093.34| Mus musculus strain C57BL/6J chromosome 10 clone rp23-168o8, complete
             sequence
          Length = 200124

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    catcgtttgtttgtttgttt 55
             ||||||||||||||||||||
Sbjct: 62459 catcgtttgtttgtttgttt 62478
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>gb|AC138974.2| Homo sapiens 3 BAC RP11-54A6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 30475

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    tcgtttgtttgtttgtttac 57
             ||||||||||||||||||||
Sbjct: 24602 tcgtttgtttgtttgtttac 24621
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>emb|AL840630.16| Zebrafish DNA sequence from clone CH211-279L11 in linkage group 17,
             complete sequence
          Length = 149164

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    gtttgtttgtttgtttaccg 59
             ||||||||||||||||||||
Sbjct: 61902 gtttgtttgtttgtttaccg 61883
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>dbj|AP006165.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1425D05, complete sequence
          Length = 66450

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    gcatcgtttgtttgtttgtt 54
             ||||||||||||||||||||
Sbjct: 45263 gcatcgtttgtttgtttgtt 45244
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>emb|BX890562.8| Zebrafish DNA sequence from clone CH211-222H17 in linkage group 4,
             complete sequence
          Length = 195554

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    catcgtttgtttgtttgttt 55
             ||||||||||||||||||||
Sbjct: 55286 catcgtttgtttgtttgttt 55267
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>emb|BX088722.8| Zebrafish DNA sequence from clone CH211-253P18 in linkage group 20,
             complete sequence
          Length = 195359

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    gtttgtttgtttgtttaccg 59
             ||||||||||||||||||||
Sbjct: 26039 gtttgtttgtttgtttaccg 26020
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>gb|AF149414.1|T19J18 Arabidopsis thaliana BAC T19J18
          Length = 43175

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 40   gtttgtttgtttgtttaccgcagg 63
            ||||||||||||||| ||||||||
Sbjct: 6305 gtttgtttgtttgttcaccgcagg 6282
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>gb|AC132587.5| Mus musculus BAC clone RP24-372N16 from 12, complete sequence
          Length = 181443

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    catcgtttgtttgtttgttt 55
             ||||||||||||||||||||
Sbjct: 86073 catcgtttgtttgtttgttt 86092
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>gb|AC122504.4| Mus musculus BAC clone RP24-419J13 from 9, complete sequence
          Length = 178896

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    catcgtttgtttgtttgttt 55
             ||||||||||||||||||||
Sbjct: 54599 catcgtttgtttgtttgttt 54580
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>emb|CT010501.6| Mouse DNA sequence from clone RP23-333D13 on chromosome 17, complete
             sequence
          Length = 207346

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    catcgtttgtttgtttgttt 55
             ||||||||||||||||||||
Sbjct: 82256 catcgtttgtttgtttgttt 82275
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>emb|AL772353.9| Mouse DNA sequence from clone RP23-390I8 on chromosome 4, complete
              sequence
          Length = 115141

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     catcgtttgtttgtttgttt 55
              ||||||||||||||||||||
Sbjct: 104272 catcgtttgtttgtttgttt 104291
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>dbj|AP007295.1| Lotus japonicus genomic DNA, clone:LjT33A04, TM0130, complete sequence
          Length = 122684

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    ggcgggcaaacaacatacca 91
             ||||||||||||||||||||
Sbjct: 22135 ggcgggcaaacaacatacca 22116
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>emb|AL390254.6|CNS06C7M Human chromosome 14 DNA sequence BAC R-991C1 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 177792

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    tcgtttgtttgtttgtttac 57
             ||||||||||||||||||||
Sbjct: 38941 tcgtttgtttgtttgtttac 38960
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>emb|AL354805.23| Mouse DNA sequence from clone RP21-544J17 on chromosome 5, complete
             sequence
          Length = 103922

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    catcgtttgtttgtttgttt 55
             ||||||||||||||||||||
Sbjct: 76864 catcgtttgtttgtttgttt 76845
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>emb|AL669982.10| Mouse DNA sequence from clone RP23-297N24 on chromosome 4, complete
             sequence
          Length = 240125

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    tcgtttgtttgtttgtttac 57
             ||||||||||||||||||||
Sbjct: 51677 tcgtttgtttgtttgtttac 51696


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,005,568
Number of Sequences: 3902068
Number of extensions: 4005568
Number of successful extensions: 936645
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 935454
Number of HSP's gapped (non-prelim): 1187
length of query: 223
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 201
effective length of database: 17,147,199,772
effective search space: 3446587154172
effective search space used: 3446587154172
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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