Clone Name | rbart09a11 |
---|---|
Clone Library Name | barley_pub |
>WRK65_ARATH (Q9LP56) Probable WRKY transcription factor 65 (WRKY DNA-binding| protein 65) Length = 259 Score = 37.4 bits (85), Expect = 0.020 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 9/65 (13%) Frame = -1 Query: 348 DFGWFEQYPTWPRTALYVPAFD------VAPPEDWEREL---QGEDALFAGLGELPECAI 196 +F WF + T T L P F V+ +D + +++LFA LGELPEC++ Sbjct: 184 EFAWFTEMETTSSTILESPIFSSEKKTAVSGADDVAVFFPMGEEDESLFADLGELPECSV 243 Query: 195 VFGRR 181 VF R Sbjct: 244 VFRHR 248
>CALX_PONPY (Q5R440) Calnexin precursor| Length = 592 Score = 30.8 bits (68), Expect = 1.9 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = -1 Query: 342 GWFEQYPTWPRTALYVPAFDVAPPEDWERELQGE 241 GW + P YVP D PEDW+ ++ GE Sbjct: 322 GWLDDEPE------YVPDPDAEKPEDWDEDMDGE 349
>CALX_HUMAN (P27824) Calnexin precursor (Major histocompatibility complex class| I antigen-binding protein p88) (p90) (IP90) Length = 592 Score = 30.8 bits (68), Expect = 1.9 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = -1 Query: 342 GWFEQYPTWPRTALYVPAFDVAPPEDWERELQGE 241 GW + P YVP D PEDW+ ++ GE Sbjct: 322 GWLDDEPE------YVPDPDAEKPEDWDEDMDGE 349
>CALX_CANFA (P24643) Calnexin precursor (pp90)| Length = 593 Score = 30.8 bits (68), Expect = 1.9 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = -1 Query: 342 GWFEQYPTWPRTALYVPAFDVAPPEDWERELQGE 241 GW + P YVP D PEDW+ ++ GE Sbjct: 323 GWLDDEPE------YVPDPDAEKPEDWDEDMDGE 350
>CALX_RAT (P35565) Calnexin precursor| Length = 591 Score = 30.4 bits (67), Expect = 2.5 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = -1 Query: 342 GWFEQYPTWPRTALYVPAFDVAPPEDWERELQGE 241 GW + P Y+P D PEDW+ ++ GE Sbjct: 323 GWLDDEPE------YIPDPDAEKPEDWDEDMDGE 350
>CALX_MOUSE (P35564) Calnexin precursor| Length = 591 Score = 30.4 bits (67), Expect = 2.5 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = -1 Query: 342 GWFEQYPTWPRTALYVPAFDVAPPEDWERELQGE 241 GW + P Y+P D PEDW+ ++ GE Sbjct: 323 GWLDDEPE------YIPDPDAEKPEDWDEDMDGE 350
>WRK69_ARATH (Q93WV5) Probable WRKY transcription factor 69 (WRKY DNA-binding| protein 69) Length = 271 Score = 29.6 bits (65), Expect = 4.2 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Frame = -1 Query: 348 DFGWFEQYPTWPRTALYVPAF-DVAPPEDWERELQGEDALFAGLGELPECAIVFGR 184 +FGWF Y ++ F DV + + +++LF LG+LP+CA VF R Sbjct: 194 EFGWF--YDASISSSSGSSNFLDVTLERGFSVGQEEDESLFGDLGDLPDCASVFRR 247
>EI2B2_PYRAB (Q9V281) Putative translation initiation factor eIF-2B subunit 2| (eIF-2B GDP-GTP exchange factor) Length = 324 Score = 28.9 bits (63), Expect = 7.2 Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%) Frame = -1 Query: 333 EQYPTWPRTA-LYVPAFDVAPPE 268 E+ TWP+ ++ PAFDV PPE Sbjct: 265 EELKTWPKNIEVWNPAFDVTPPE 287
>EI2B2_PYRHO (O57947) Putative translation initiation factor eIF-2B subunit 2| (eIF-2B GDP-GTP exchange factor) Length = 324 Score = 28.5 bits (62), Expect = 9.4 Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%) Frame = -1 Query: 333 EQYPTWPRTA-LYVPAFDVAPPE 268 E+ TWP+ ++ PAFDV PPE Sbjct: 265 EELRTWPKNIEVWNPAFDVTPPE 287 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,344,489 Number of Sequences: 219361 Number of extensions: 328086 Number of successful extensions: 1058 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1049 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1057 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)