>dbj|AK120636.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153K01, full
            insert sequence
          Length = 1754

 Score =  224 bits (113), Expect = 2e-55
 Identities = 226/260 (86%), Gaps = 8/260 (3%)
 Strand = Plus / Minus

                                                                        
Query: 141  aagtacatgtctagtgaagagttcccataaaagactaatctagcttcatttatctcttaa 200
            ||||||||||||| ||||||| || || |||| ||||| ||||||| | ||||||  |||
Sbjct: 1606 aagtacatgtctaatgaagagatctcagaaaacactaagctagcttgaattatcttgtaa 1547

                                                                        
Query: 201  cagcgaaaactcagagcaaaa--ctgatttccagatcagaggtagccagaatatgcaaga 258
            |||  |||| | |||||||||  |||||||||| |||||||| |||||||||||||||||
Sbjct: 1546 caga-aaaattgagagcaaaaaactgatttccatatcagaggcagccagaatatgcaaga 1488

                                                                        
Query: 259  catccatgcatgcagacnacacttctgaattcagcacaaccattcaaagcatatgctccc 318
            |||||||| | |||||| ||  ||||||||||||||||||||||||||||||||||||||
Sbjct: 1487 catccatgtaagcagacaac--ttctgaattcagcacaaccattcaaagcatatgctccc 1430

                                                                        
Query: 319  aagagttgtcaacaaccttagaaataaggtggcacattggggtacattggaggagccctg 378
            |||||||||||   |||| |||||||||| |||||||||||||||||   |||||| || 
Sbjct: 1429 aagagttgtcacacacctcagaaataaggaggcacattggggtacat---aggagctcta 1373

                                
Query: 379  ccacctggtcctggtgacat 398
            ||||||||||| ||||||||
Sbjct: 1372 ccacctggtccaggtgacat 1353

>gb|AY107610.1| Zea mays PCO082984 mRNA sequence
          Length = 697

 Score =  210 bits (106), Expect = 3e-51
 Identities = 148/161 (91%), Gaps = 1/161 (0%)
 Strand = Plus / Minus

                                                                       
Query: 227 ttccagatcagaggtagccagaatatgcaagacatccatgcatgcagacnacacttctga 286
           |||||||||||| |||||||||||||||||| |||||||| | |||||| ||||||||||
Sbjct: 422 ttccagatcagaagtagccagaatatgcaaggcatccatgtaagcagacaacacttctga 363

                                                                       
Query: 287 attcagcacaaccatt-caaagcatatgctcccaagagttgtcaacaaccttagaaataa 345
           |||||||||||||||| ||||| |||||||||||||||||||||   |||||||||||||
Sbjct: 362 attcagcacaaccatttcaaaggatatgctcccaagagttgtcacacaccttagaaataa 303

                                                    
Query: 346 ggtggcacattggggtacattggaggagccctgccacctgg 386
           |||||||| ||||| ||||| ||||||||||||||||||||
Sbjct: 302 ggtggcacgttgggatacataggaggagccctgccacctgg 262

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  178 bits (90), Expect = 1e-41
 Identities = 168/191 (87%), Gaps = 5/191 (2%)
 Strand = Plus / Plus

                                                                            
Query: 141      aagtacatgtctagtgaagagttcccataaaagactaatctagcttcatttatctcttaa 200
                ||||||||||||| ||||||| || || |||| ||||| ||||||| | ||||||  |||
Sbjct: 24365362 aagtacatgtctaatgaagagatctcagaaaacactaagctagcttgaattatcttgtaa 24365421

                                                                            
Query: 201      cagcgaaaactcagagcaaaa--ctgatttccagatcagaggtagccagaatatgcaaga 258
                |||  |||| | |||||||||  |||||||||| |||||||| |||||||||||||||||
Sbjct: 24365422 caga-aaaattgagagcaaaaaactgatttccatatcagaggcagccagaatatgcaaga 24365480

                                                                            
Query: 259      catccatgcatgcagacnacacttctgaattcagcacaaccattcaaagcatatgctccc 318
                |||||||| | |||||| ||  ||||||||||||||||||||||||||||||||||||||
Sbjct: 24365481 catccatgtaagcagacaac--ttctgaattcagcacaaccattcaaagcatatgctccc 24365538

                           
Query: 319      aagagttgtca 329
                |||||||||||
Sbjct: 24365539 aagagttgtca 24365549



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 58/66 (87%), Gaps = 3/66 (4%)
 Strand = Plus / Plus

                                                                            
Query: 333      accttagaaataaggtggcacattggggtacattggaggagccctgccacctggtcctgg 392
                |||| |||||||||| |||||||||||||||||   |||||| || ||||||||||| ||
Sbjct: 24366854 acctcagaaataaggaggcacattggggtacat---aggagctctaccacctggtccagg 24366910

                      
Query: 393      tgacat 398
                ||||||
Sbjct: 24366911 tgacat 24366916

>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0410E01
          Length = 166753

 Score =  178 bits (90), Expect = 1e-41
 Identities = 168/191 (87%), Gaps = 5/191 (2%)
 Strand = Plus / Plus

                                                                          
Query: 141    aagtacatgtctagtgaagagttcccataaaagactaatctagcttcatttatctcttaa 200
              ||||||||||||| ||||||| || || |||| ||||| ||||||| | ||||||  |||
Sbjct: 111266 aagtacatgtctaatgaagagatctcagaaaacactaagctagcttgaattatcttgtaa 111325

                                                                          
Query: 201    cagcgaaaactcagagcaaaa--ctgatttccagatcagaggtagccagaatatgcaaga 258
              |||  |||| | |||||||||  |||||||||| |||||||| |||||||||||||||||
Sbjct: 111326 caga-aaaattgagagcaaaaaactgatttccatatcagaggcagccagaatatgcaaga 111384

                                                                          
Query: 259    catccatgcatgcagacnacacttctgaattcagcacaaccattcaaagcatatgctccc 318
              |||||||| | |||||| ||  ||||||||||||||||||||||||||||||||||||||
Sbjct: 111385 catccatgtaagcagacaac--ttctgaattcagcacaaccattcaaagcatatgctccc 111442

                         
Query: 319    aagagttgtca 329
              |||||||||||
Sbjct: 111443 aagagttgtca 111453



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 58/66 (87%), Gaps = 3/66 (4%)
 Strand = Plus / Plus

                                                                          
Query: 333    accttagaaataaggtggcacattggggtacattggaggagccctgccacctggtcctgg 392
              |||| |||||||||| |||||||||||||||||   |||||| || ||||||||||| ||
Sbjct: 112758 acctcagaaataaggaggcacattggggtacat---aggagctctaccacctggtccagg 112814

                    
Query: 393    tgacat 398
              ||||||
Sbjct: 112815 tgacat 112820

>gb|AC066614.8| Homo sapiens chromosome 15 clone RP11-80G8 map 15q21.3, complete
             sequence
          Length = 176626

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 217   caaaactgatttccagatcagagg 240
             ||||||||||||||||||||||||
Sbjct: 67722 caaaactgatttccagatcagagg 67699

>ref|XM_445274.1| Candida glabrata CBS138, CAGL0C02255g partial mRNA
          Length = 1947

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 58   acttggtatcacaagacaataca 80
            |||||||||||||||||||||||
Sbjct: 1231 acttggtatcacaagacaataca 1253

>emb|CR380949.1| Candida glabrata strain CBS138 chromosome C complete sequence
          Length = 558804

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 58     acttggtatcacaagacaataca 80
              |||||||||||||||||||||||
Sbjct: 228725 acttggtatcacaagacaataca 228703

>gb|AC127297.4| Mus musculus BAC clone RP23-395B13 from chromosome 3, complete sequence
          Length = 222889

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 224    gatttccagatcagaggtagcc 245
              ||||||||||||||||||||||
Sbjct: 128792 gatttccagatcagaggtagcc 128813

>gb|AC079630.18| Homo sapiens 12 BAC RP11-476D10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 178388

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 227   ttccagatcagaggtagccagaatatgca 255
             |||||||||| |||||||||||| |||||
Sbjct: 42507 ttccagatcaaaggtagccagaaaatgca 42535

>dbj|AB090307.1| Bombyx mori Bmfkbp13, Bmhepa, Bmhig, Bm6922, Bmlap, Bmprojectin,
              Bmkettin, Bmtitin1 genes, partial and complete cds
          Length = 160000

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 92     aaatgatgattcgggtattta 112
              |||||||||||||||||||||
Sbjct: 113123 aaatgatgattcgggtattta 113143

>dbj|AB079865.1| Bombyx mori gene for BMKETTIN, complete cds
          Length = 29280

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 92    aaatgatgattcgggtattta 112
             |||||||||||||||||||||
Sbjct: 19280 aaatgatgattcgggtattta 19300

>gb|L19936.1|HUMTCREC Human T cell receptor (TCRB) gene, V region, exons 1 and 2
          Length = 969

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 368 gaggagccctgccacctggtc 388
           |||||||||||||||||||||
Sbjct: 856 gaggagccctgccacctggtc 836

>gb|U48260.1|HSU48260 Human T cell receptor beta chain variable region (Vb17) gene,
           allele BV17S1*3, partial cds
          Length = 623

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 368 gaggagccctgccacctggtc 388
           |||||||||||||||||||||
Sbjct: 604 gaggagccctgccacctggtc 584

>gb|U48259.1|HSU48259 Human T cell receptor beta chain variable region (Vb17) gene,
           allele BV17S1*2, partial cds
          Length = 623

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 368 gaggagccctgccacctggtc 388
           |||||||||||||||||||||
Sbjct: 604 gaggagccctgccacctggtc 584

>dbj|AB026191.1| Bombyx mori mRNA for BM KETTIN, partial cds
          Length = 1405

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  aaatgatgattcgggtattta 112
           |||||||||||||||||||||
Sbjct: 369 aaatgatgattcgggtattta 389

>emb|AL840642.7| Mouse DNA sequence from clone RP23-14P24 on chromosome X, complete
             sequence
          Length = 133498

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 213   agagcaaaactgatttccaga 233
             |||||||||||||||||||||
Sbjct: 67376 agagcaaaactgatttccaga 67396

>ref|XM_527924.1| PREDICTED: Pan troglodytes similar to T-cell receptor beta
            (LOC472549), mRNA
          Length = 1041

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  gaggagccctgccacctggt 387
            ||||||||||||||||||||
Sbjct: 1029 gaggagccctgccacctggt 1010

>gb|AC099631.6| Mus musculus chromosome 1, clone RP24-93F22, complete sequence
          Length = 185048

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 322    agttgtcaacaaccttagaaataa 345
              ||||||||||||| ||||||||||
Sbjct: 159549 agttgtcaacaacgttagaaataa 159572

>gb|AC134546.4| Mus musculus BAC clone RP24-471H17 from chromosome 18, complete
             sequence
          Length = 208921

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    aatacacaagaatataaaaa 94
             ||||||||||||||||||||
Sbjct: 96208 aatacacaagaatataaaaa 96189

>gb|AC099589.12| Mus musculus chromosome 1, clone RP23-337A19, complete sequence
          Length = 264062

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 322    agttgtcaacaaccttagaaataa 345
              ||||||||||||| ||||||||||
Sbjct: 211540 agttgtcaacaacgttagaaataa 211517

>gb|AC146433.3| Pan troglodytes BAC clone RP43-19C19 from 7, complete sequence
          Length = 180951

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 368 gaggagccctgccacctggt 387
           ||||||||||||||||||||
Sbjct: 927 gaggagccctgccacctggt 908

>gb|AC129190.3| Mus musculus BAC clone RP24-79D2 from chromosome 1, complete sequence
          Length = 236342

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 322    agttgtcaacaaccttagaaataa 345
              ||||||||||||| ||||||||||
Sbjct: 188279 agttgtcaacaacgttagaaataa 188256

>gb|AC006269.13| Homo sapiens chromosome , clone RP11-515E23, complete sequence
          Length = 167229

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 183   gcttcatttatctcttaaca 202
             ||||||||||||||||||||
Sbjct: 84026 gcttcatttatctcttaaca 84045

>gb|AC092392.2| Homo sapiens chromosome 1 clone RP4-544H6, complete sequence
          Length = 98286

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   gtctagtgaagagttcccat 168
             ||||||||||||||||||||
Sbjct: 61533 gtctagtgaagagttcccat 61552

>gb|AC120041.5| Homo sapiens chromosome 8, clone RP11-478M19, complete sequence
          Length = 134224

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   agagttgtcaacaaccttag 339
             ||||||||||||||||||||
Sbjct: 95964 agagttgtcaacaaccttag 95945

>gb|AC104257.12| Homo sapiens chromosome 8, clone CTD-2501M5, complete sequence
          Length = 167787

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   agagttgtcaacaaccttag 339
             ||||||||||||||||||||
Sbjct: 31263 agagttgtcaacaaccttag 31244

>gb|AC104838.3| Homo sapiens chromosome 1 clone RP4-671I22, complete sequence
          Length = 143280

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 149  gtctagtgaagagttcccat 168
            ||||||||||||||||||||
Sbjct: 4832 gtctagtgaagagttcccat 4851

>emb|BX629358.1|CNS09SBU Tetraodon nigroviridis BAC sequence
          Length = 157345

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 251    atgcaagacatccatgcatg 270
              ||||||||||||||||||||
Sbjct: 103126 atgcaagacatccatgcatg 103145

>emb|AL513143.3|CNS07EFO Human chromosome 14 DNA sequence BAC R-611H21 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 155584

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 281   ttctgaattcagcacaacca 300
             ||||||||||||||||||||
Sbjct: 23618 ttctgaattcagcacaacca 23637

>emb|AL157690.7|CNS01RG2 Human chromosome 14 DNA sequence BAC R-565E24 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 163398

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 281   ttctgaattcagcacaacca 300
             ||||||||||||||||||||
Sbjct: 97113 ttctgaattcagcacaacca 97094


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,022,050
Number of Sequences: 3902068
Number of extensions: 4022050
Number of successful extensions: 77224
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77134
Number of HSP's gapped (non-prelim): 80
length of query: 424
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 402
effective length of database: 17,147,199,772
effective search space: 6893174308344
effective search space used: 6893174308344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)