>gb|AC025773.7| Homo sapiens chromosome 5 clone CTD-2287N17, complete sequence
          Length = 145876

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 107   agaaactgaaatttcacatacaactt 132
             |||||||||||| |||||||||||||
Sbjct: 96654 agaaactgaaatctcacatacaactt 96679

>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 22      tctgatttttcttgcttgtt 41
               ||||||||||||||||||||
Sbjct: 1294406 tctgatttttcttgcttgtt 1294387

>ref|XM_616223.2| PREDICTED: Bos taurus similar to voltage gated channel like 1,
            transcript variant 1 (LOC536103), mRNA
          Length = 6898

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 40   tttcttatgtacaaaaagga 59
            ||||||||||||||||||||
Sbjct: 6882 tttcttatgtacaaaaagga 6863

>gb|AC130609.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0048F12,
             complete sequence
          Length = 139627

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    atttttcttgcttgtttctt 45
             ||||||||||||||||||||
Sbjct: 90296 atttttcttgcttgtttctt 90277

>emb|AL160391.13| Human DNA sequence from clone RP11-121J6 on chromosome 13, complete
              sequence
          Length = 166757

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    aaactgaaatttcacataca 128
              ||||||||||||||||||||
Sbjct: 150686 aaactgaaatttcacataca 150705

>emb|CR936538.5| Wallaby DNA sequence from clone MEKBa-43B7, complete sequence
          Length = 115930

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    ttttcttgcttgtttcttat 47
             ||||||||||||||||||||
Sbjct: 18686 ttttcttgcttgtttcttat 18705

>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 22      tctgatttttcttgcttgtt 41
               ||||||||||||||||||||
Sbjct: 1544055 tctgatttttcttgcttgtt 1544036

>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 22      tctgatttttcttgcttgtt 41
               ||||||||||||||||||||
Sbjct: 1373998 tctgatttttcttgcttgtt 1373979

>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 22      tctgatttttcttgcttgtt 41
               ||||||||||||||||||||
Sbjct: 1298152 tctgatttttcttgcttgtt 1298133

>emb|AL159156.15| Human DNA sequence from clone RP11-524F1 on chromosome 13, complete
             sequence
          Length = 166436

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    gatttttcttgcttgtttct 44
             ||||||||||||||||||||
Sbjct: 24443 gatttttcttgcttgtttct 24424

>emb|X59501.1|ECADHGENE Escherichia coli oppA & ychE genes
          Length = 2023

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 22   tctgatttttcttgcttgtt 41
            ||||||||||||||||||||
Sbjct: 1213 tctgatttttcttgcttgtt 1232

>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 22      tctgatttttcttgcttgtt 41
               ||||||||||||||||||||
Sbjct: 1300506 tctgatttttcttgcttgtt 1300487

>gb|AC016773.8| Homo sapiens BAC clone RP11-572O17 from 4, complete sequence
          Length = 189223

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    ctgatttttcttgcttgttt 42
             ||||||||||||||||||||
Sbjct: 21989 ctgatttttcttgcttgttt 21970

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 26       atttttcttgcttgtttctt 45
                ||||||||||||||||||||
Sbjct: 11645861 atttttcttgcttgtttctt 11645842

>gb|AC147067.4| Homo sapiens BAC clone RP13-1016M1 from 4, complete sequence
          Length = 167744

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     ctgatttttcttgcttgttt 42
              ||||||||||||||||||||
Sbjct: 152699 ctgatttttcttgcttgttt 152680

>gb|AC016945.22| Homo sapiens 3 BAC RP11-31L6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 96001

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    tttttcttgcttgtttctta 46
             ||||||||||||||||||||
Sbjct: 58946 tttttcttgcttgtttctta 58965

>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 22      tctgatttttcttgcttgtt 41
               ||||||||||||||||||||
Sbjct: 1294299 tctgatttttcttgcttgtt 1294280

>dbj|AB022214.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K5F14
          Length = 31178

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    tttttcttgcttgtttctta 46
             ||||||||||||||||||||
Sbjct: 23867 tttttcttgcttgtttctta 23886

>emb|X59263.1|ECADHEG E.coli adhE gene for alcohol dehydrogenase
          Length = 4766

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 22   tctgatttttcttgcttgtt 41
            ||||||||||||||||||||
Sbjct: 1213 tctgatttttcttgcttgtt 1232

>gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence
          Length = 317137

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 109    aaactgaaatttcacatacaactt 132
              |||||||||||| |||||||||||
Sbjct: 287131 aaactgaaattttacatacaactt 287154

>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 22      tctgatttttcttgcttgtt 41
               ||||||||||||||||||||
Sbjct: 1834908 tctgatttttcttgcttgtt 1834889

>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 22      tctgatttttcttgcttgtt 41
               ||||||||||||||||||||
Sbjct: 1742972 tctgatttttcttgcttgtt 1742953

>gb|M60918.1|ECOOPPAA Escherichia coli periplasmic oligopeptide binding protein (oppA)
          gene, complete cds
          Length = 2829

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 22 tctgatttttcttgcttgtt 41
          ||||||||||||||||||||
Sbjct: 41 tctgatttttcttgcttgtt 22

>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 22      tctgatttttcttgcttgtt 41
               ||||||||||||||||||||
Sbjct: 1804912 tctgatttttcttgcttgtt 1804931

>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 22      tctgatttttcttgcttgtt 41
               ||||||||||||||||||||
Sbjct: 2036161 tctgatttttcttgcttgtt 2036180


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,401,728
Number of Sequences: 3902068
Number of extensions: 2401728
Number of successful extensions: 49136
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49061
Number of HSP's gapped (non-prelim): 75
length of query: 249
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 227
effective length of database: 17,147,199,772
effective search space: 3892414348244
effective search space used: 3892414348244
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)