>gb|AC154566.2| Mus musculus BAC clone RP23-407A17 from chromosome 17, complete
             sequence
          Length = 204306

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 281   tttcttccagtttccttcctt 301
             |||||||||||||||||||||
Sbjct: 32699 tttcttccagtttccttcctt 32679

>gb|AC160652.2| Pan troglodytes BAC clone CH251-490H15 from chromosome 6, complete
              sequence
          Length = 169342

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 6      gtaaggatatacaaatgaaaacata 30
              |||| ||||||||||||||||||||
Sbjct: 136654 gtaaagatatacaaatgaaaacata 136630

>gb|AC122189.4| Mus musculus BAC clone RP23-36C8 from 1, complete sequence
          Length = 247309

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 120    aatccagaaagcatgaaaaagagag 144
              ||||||||||| |||||||||||||
Sbjct: 196823 aatccagaaagtatgaaaaagagag 196847

>gb|AC122812.4| Mus musculus BAC clone RP23-285M9 from 1, complete sequence
          Length = 208430

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 120   aatccagaaagcatgaaaaagagag 144
             ||||||||||| |||||||||||||
Sbjct: 53920 aatccagaaagtatgaaaaagagag 53944

>gb|AC161366.6| Mus musculus BAC clone RP24-230D17 from chromosome 9, complete sequence
          Length = 155733

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 305    ttatttcccattttgttctcc 325
              |||||||||||||||||||||
Sbjct: 111072 ttatttcccattttgttctcc 111092

>ref|XM_963457.1| PREDICTED: Tribolium castaneum similar to RIKEN cDNA G430041M01
           (LOC656964), mRNA
          Length = 641

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 92  agacgctcaatccgaaaacgc 112
           |||||||||||||||||||||
Sbjct: 384 agacgctcaatccgaaaacgc 364

>gb|AC112162.8| Mus Musculus chromosome 9 BAC clone MGS1-296M6 ES cell line, complete
             sequence
          Length = 116580

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 305   ttatttcccattttgttctcc 325
             |||||||||||||||||||||
Sbjct: 84853 ttatttcccattttgttctcc 84873

>gb|AC108159.5| Homo sapiens chromosome 4 clone RP11-603B8, complete sequence
          Length = 74025

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 303   cattatttcccattttgttct 323
             |||||||||||||||||||||
Sbjct: 27853 cattatttcccattttgttct 27833

>gb|AC058823.4| Homo sapiens BAC clone RP11-810D13 from 4, complete sequence
          Length = 144277

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 303    cattatttcccattttgttct 323
              |||||||||||||||||||||
Sbjct: 129878 cattatttcccattttgttct 129858

>gb|AC161823.4| Pan troglodytes BAC clone CH251-142M23 from chromosome unknown, complete
              sequence
          Length = 163179

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 6      gtaaggatatacaaatgaaaacata 30
              |||| ||||||||||||||||||||
Sbjct: 110187 gtaaagatatacaaatgaaaacata 110163

>gb|AC122463.4| Mus musculus BAC clone RP24-296C19 from 9, complete sequence
          Length = 162528

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 305    ttatttcccattttgttctcc 325
              |||||||||||||||||||||
Sbjct: 104502 ttatttcccattttgttctcc 104482

>gb|AC138221.23| Mus musculus chromosome 15, clone RP23-204C16, complete sequence
          Length = 239740

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 202    tcctcctgttaccataaacag 222
              |||||||||||||||||||||
Sbjct: 156771 tcctcctgttaccataaacag 156791

>gb|AC101728.10| Mus musculus chromosome 19, clone RP23-328I5, complete sequence
          Length = 184577

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 292   ttccttcctttcattatttc 311
             ||||||||||||||||||||
Sbjct: 79539 ttccttcctttcattatttc 79520

>ref|XM_416737.1| PREDICTED: Gallus gallus similar to transmembrane protease, serine
           2 (LOC418528), mRNA
          Length = 1747

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 332 gcattccagtagcacctcca 351
           ||||||||||||||||||||
Sbjct: 362 gcattccagtagcacctcca 381

>emb|AL590546.7| Human DNA sequence from clone RP11-402O5 on chromosome 6, complete
             sequence
          Length = 72962

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 283   tcttccagtttccttcctttcattattt 310
             |||||||||||||||||| |||| ||||
Sbjct: 40412 tcttccagtttccttcctctcatcattt 40385

>gb|AC018977.9| Homo sapiens chromosome 10 clone RP11-386C23, complete sequence
          Length = 222810

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 309   ttcccattttgttctcccaa 328
             ||||||||||||||||||||
Sbjct: 40819 ttcccattttgttctcccaa 40838

>emb|AL139117.11| Human DNA sequence from clone RP1-52N12 on chromosome 19, complete
             sequence
          Length = 148497

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 279   tatttcttccagtttccttc 298
             ||||||||||||||||||||
Sbjct: 64663 tatttcttccagtttccttc 64644

>gb|DQ455139.1| Medicago truncatula cDNA-AFLP fragment BC22M43_68 sequence
          Length = 231

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 293 tccttcctttcattatttcc 312
           ||||||||||||||||||||
Sbjct: 197 tccttcctttcattatttcc 178

>emb|AL451020.1|NC15E11 Neurospora crassa DNA linkage group V Cosmid contig 15E11
          Length = 79133

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 289   agtttccttcctttcattatttcc 312
             ||||||||||||| ||||||||||
Sbjct: 18606 agtttccttccttccattatttcc 18629

>emb|CR759950.3| Gorilla DNA sequence from clone CH255-431H18, complete sequence
          Length = 177306

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 279    tatttcttccagtttccttc 298
              ||||||||||||||||||||
Sbjct: 118064 tatttcttccagtttccttc 118045

>gb|AC020903.7| Homo sapiens chromosome 5 clone CTB-40D4, complete sequence
          Length = 127321

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     taaggatatacaaatgaaaa 26
             ||||||||||||||||||||
Sbjct: 37666 taaggatatacaaatgaaaa 37685

>gb|AC051654.9| Homo sapiens chromosome 8, clone RP11-35O14, complete sequence
          Length = 176393

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   ttcccattttgttctcccaa 328
             ||||||||||||||||||||
Sbjct: 56707 ttcccattttgttctcccaa 56688

>gb|AC012558.9| Homo sapiens chromosome 10 clone RP11-174J11, complete sequence
          Length = 179391

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 309    ttcccattttgttctcccaa 328
              ||||||||||||||||||||
Sbjct: 134334 ttcccattttgttctcccaa 134353

>gb|AC160648.3| Pan troglodytes BAC clone CH251-568C23 from chromosome unknown,
             complete sequence
          Length = 205923

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 279   tatttcttccagtttccttc 298
             ||||||||||||||||||||
Sbjct: 78742 tatttcttccagtttccttc 78723

>gb|AC091948.3| Homo sapiens chromosome 5 clone RP11-373N22, complete sequence
          Length = 172162

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 312    ccattttgttctcccaagatgcat 335
              |||||||||| |||||||||||||
Sbjct: 99991  ccattttgttttcccaagatgcat 100014

>gb|AC175823.2| Pan troglodytes BAC clone CH251-175P6 from chromosome unknown, complete
              sequence
          Length = 176244

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 279    tatttcttccagtttccttc 298
              ||||||||||||||||||||
Sbjct: 111169 tatttcttccagtttccttc 111150

>gb|AC112969.12| Mus musculus chromosome 8, clone RP24-331K7, complete sequence
          Length = 164201

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   tccagaaagcatgaaaaaga 141
             ||||||||||||||||||||
Sbjct: 89477 tccagaaagcatgaaaaaga 89458

>ref|XM_340847.2| PREDICTED: Rattus norvegicus similar to myosin XVIIIa (LOC360570),
            mRNA
          Length = 9534

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 292  ttccttcctttcattatttcccat 315
            ||||||||| ||||||||||||||
Sbjct: 1296 ttccttcctgtcattatttcccat 1273

>gb|AC009892.5|AC009892 Homo sapiens chromosome 19 clone CTB-83J4, complete sequence
          Length = 134008

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 279    tatttcttccagtttccttc 298
              ||||||||||||||||||||
Sbjct: 115203 tatttcttccagtttccttc 115184

>gb|AC159033.2| Pan troglodytes BAC clone CH251-339G2 from chromosome unknown, complete
              sequence
          Length = 152653

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 279    tatttcttccagtttccttc 298
              ||||||||||||||||||||
Sbjct: 149690 tatttcttccagtttccttc 149671

>gb|AF363578.1| Homo sapiens ATPase H+ transporting lysosomal protein (ATP6C) gene,
             complete cds; BAALC (BAALC) gene, complete cds,
             alternatively spliced; and frizzled-like protein 6 (FZD6)
             gene, complete cds
          Length = 347253

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 309   ttcccattttgttctcccaa 328
             ||||||||||||||||||||
Sbjct: 21587 ttcccattttgttctcccaa 21606

>gb|AC154406.2| Mus musculus BAC clone RP24-251M20 from 9, complete sequence
          Length = 169877

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 292   ttccttcctttcattatttc 311
             ||||||||||||||||||||
Sbjct: 89458 ttccttcctttcattatttc 89439

>dbj|AP001011.6| Homo sapiens genomic DNA, chromosome 18 clone:RP11-703M24, complete
              sequence
          Length = 204777

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 280    atttcttccagtttccttcc 299
              ||||||||||||||||||||
Sbjct: 145092 atttcttccagtttccttcc 145073

>emb|AL355172.8| Human DNA sequence from clone RP4-598H20 on chromosome 19, complete
             sequence
          Length = 84808

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 279   tatttcttccagtttccttc 298
             ||||||||||||||||||||
Sbjct: 46637 tatttcttccagtttccttc 46618

>emb|AL713863.7| Mouse DNA sequence from clone RP23-330I16 on chromosome X, complete
              sequence
          Length = 203422

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 197    gctaatcctcctgttaccat 216
              ||||||||||||||||||||
Sbjct: 125633 gctaatcctcctgttaccat 125652

>emb|AL844561.5| Mouse DNA sequence from clone RP23-214D2 on chromosome 2, complete
              sequence
          Length = 203361

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 24     aaacatagttcagaagcagttctt 47
              ||||| ||||||||||||||||||
Sbjct: 110867 aaacagagttcagaagcagttctt 110844

>gb|AC010518.7| Homo sapiens chromosome 19 clone LLNLR-260H6, complete sequence
          Length = 34674

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 279  tatttcttccagtttccttc 298
            ||||||||||||||||||||
Sbjct: 2975 tatttcttccagtttccttc 2994

>dbj|AP003550.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1639H6, complete
            sequence
          Length = 140609

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 309  ttcccattttgttctcccaa 328
            ||||||||||||||||||||
Sbjct: 5639 ttcccattttgttctcccaa 5658


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,424,792
Number of Sequences: 3902068
Number of extensions: 4424792
Number of successful extensions: 89592
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89524
Number of HSP's gapped (non-prelim): 68
length of query: 435
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 413
effective length of database: 17,147,199,772
effective search space: 7081793505836
effective search space used: 7081793505836
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)