ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart08h06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 72 2e-09
2dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
3gb|AC137070.2| Genomic sequence for Oryza sativa, Nipponbare str... 72 2e-09
4dbj|AK058426.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
5gb|AY106877.1| Zea mays PCO149877 mRNA sequence 50 0.007
6gb|BT018452.1| Zea mays clone EL01N0408A12.d mRNA sequence 44 0.40
7gb|AC019046.4|AC019046 Homo sapiens BAC clone RP11-71D23 from 2,... 44 0.40
8dbj|AB209681.1| Homo sapiens mRNA for RAP guanine-nucleotide-exc... 44 0.40
9ref|NM_102411.1| Arabidopsis thaliana GRF12; protein phosphoryla... 42 1.6
10gb|AY085338.1| Arabidopsis thaliana clone 146580 mRNA, complete ... 42 1.6
11gb|AC013427.3|T1K7 Sequence of BAC T1K7 from Arabidopsis thalian... 42 1.6
12dbj|AK117907.1| Arabidopsis thaliana At1g26480 mRNA for putative... 42 1.6
13gb|AF235103.5| Homo sapiens chromosome 8 multiple clones map q24... 40 6.3
14emb|AL157879.7| Human DNA sequence from clone RP11-110H4 on chro... 40 6.3
15gb|AC093243.2| Homo sapiens chromosome 5 clone RP11-110H4, compl... 40 6.3
16gb|AC104914.9| Mus musculus chromosome 9, clone RP23-108E20, com... 40 6.3
17gb|AC140139.2| Homo sapiens chromosome 5 clone RP11-1417I21, com... 40 6.3
18gb|AC139776.2| Homo sapiens chromosome 5 clone RP11-1005E12, com... 40 6.3
19gb|AC139495.2| Homo sapiens chromosome 5 clone RP11-848G14, comp... 40 6.3
20gb|AC139272.3| Homo sapiens chromosome 5 clone RP11-589F5, compl... 40 6.3
21gb|AC138959.2| Homo sapiens chromosome 5 clone RP11-880C13, comp... 40 6.3
22gb|AC138866.2| Homo sapiens chromosome 5 clone RP11-1415C14, com... 40 6.3
23gb|AC146949.1| Homo sapiens chromosome 5 clone RP11-1198D22, com... 40 6.3
24gb|AC145129.2| Homo sapiens chromosome 5 clone RP11-1080P5, comp... 40 6.3
25gb|AC145034.2| Homo sapiens chromosome 5 clone RP11-1414O21, com... 40 6.3
26gb|AC146944.1| Homo sapiens chromosome 5 clone RP11-497H16, comp... 40 6.3
27gb|AC138957.2| Homo sapiens chromosome 5 clone RP11-846E4, compl... 40 6.3
28gb|AC139505.2| Homo sapiens chromosome 5 clone RP11-910M8, compl... 40 6.3
29gb|AC138928.2| Homo sapiens chromosome 5 clone RP11-674O19, comp... 40 6.3
30gb|AC145144.2| Homo sapiens chromosome 5 clone RP11-1432L1, comp... 40 6.3
31gb|AC145102.2| Homo sapiens chromosome 5 clone RP11-696L12, comp... 40 6.3
32gb|AC139510.3| Homo sapiens chromosome 5 clone RP11-977J23, comp... 40 6.3
33gb|AC139507.2| Homo sapiens chromosome 5 clone RP11-937A6, compl... 40 6.3
34emb|AL158839.11| Human DNA sequence from clone RP11-180O5 on chr... 40 6.3
35gb|AC139463.2| Homo sapiens chromosome 5 clone RPCI-11_1264N5, c... 40 6.3
36gb|AC139277.2| Homo sapiens chromosome 5 clone RP11-619K7, compl... 40 6.3
37gb|AC138911.2| Homo sapiens chromosome 5 clone RP11-618O22, comp... 40 6.3
38emb|AL133255.14| Human DNA sequence from clone RP11-239L20 on ch... 40 6.3
39gb|AC139492.2| Homo sapiens chromosome 5 clone RP11-842C12, comp... 40 6.3
40gb|AC132802.2| Homo sapiens chromosome 5 clone CTC-273M15, compl... 40 6.3
41gb|AC139103.3| Homo sapiens chromosome 8, clone, complete sequence 40 6.3
42emb|AL009030.15|HS28I24 Human DNA sequence from clone RP1-28I24 ... 40 6.3
43gb|AC105449.8| Homo sapiens chromosome 8, clone RP11-152B5, comp... 40 6.3
44gb|AC182492.2| Pan troglodytes BAC clone CH251-294F23 from chrom... 40 6.3
45gb|AC108149.4| Homo sapiens BAC clone RP11-473D12 from 4, comple... 40 6.3
46gb|AC093247.3| Homo sapiens chromosome 5 clone RP11-138M1, compl... 40 6.3
47gb|AC139500.2| Homo sapiens chromosome 5 clone RP11-864E4, compl... 40 6.3
48gb|AC140175.2| Homo sapiens chromosome 5 clone RP11-833G1, compl... 40 6.3
49gb|AC108108.2| Homo sapiens chromosome 5 clone RP11-260M21, comp... 40 6.3
50gb|AC138951.2| Homo sapiens chromosome 5 clone RP11-823P9, compl... 40 6.3
51gb|AF327113.1|AF327113 Homo sapiens clone 8qtel_c9t7 sequence 40 6.3
52gb|AC138821.2| Homo sapiens chromosome 5 clone RP11-1104E16, com... 40 6.3
53gb|AC137781.2| Homo sapiens chromosome 5 clone RP11-1108I11, com... 40 6.3
54gb|AC138410.1| Homo sapiens chromosome 5 clone RP11-1124O10, com... 40 6.3
55gb|AC138409.1| Homo sapiens chromosome 5 clone RP11-1023L17, com... 40 6.3
56gb|AC131392.2| Homo sapiens chromosome 5 clone RP11-98J23, compl... 40 6.3
57gb|AC144461.33| Mus musculus strain C57BL/6J clone rp23-427m23, ... 40 6.3
58dbj|AP005976.2| Homo sapiens genomic DNA, chromosome 8qtel, clon... 40 6.3
59gb|AC150681.2| Mus musculus BAC clone RP24-490A22 from 7, comple... 40 6.3
60gb|AC132801.2| Homo sapiens chromosome 5 clone CTC-202O15, compl... 40 6.3 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Plus

                                                                            
Query: 296      atctcatcttcctgatgagaccaaggtcctctctccggaaccctgccgaaccaatggttt 355
                ||||||||| |||||||||||||||| ||||||| | || ||||||   |||||||||||
Sbjct: 11892726 atctcatctgcctgatgagaccaaggacctctcttcagagccctgcttgaccaatggttt 11892785

                                
Query: 356      tgcaggtggaggaagc 371
                ||| ||||||| ||||
Sbjct: 11892786 tgcgggtggagaaagc 11892801



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                         
Query: 212      acaacctgtacacaccaacaacaatcgagaaactgtacaga 252
                |||||||||||||| ||| ||||||| ||||||||||||||
Sbjct: 11892642 acaacctgtacacatcaagaacaatcaagaaactgtacaga 11892682



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                               
Query: 418      gttctggctgcttcgtgtatgtgaactgcaggtccttgttcgcagcc 464
                ||||||| | ||| |||||  |||||||||| |||||||||||||||
Sbjct: 11892857 gttctggtttcttggtgtagttgaactgcagatccttgttcgcagcc 11892903
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Plus

                                                                            
Query: 296      atctcatcttcctgatgagaccaaggtcctctctccggaaccctgccgaaccaatggttt 355
                ||||||||| |||||||||||||||| ||||||| | || ||||||   |||||||||||
Sbjct: 11889489 atctcatctgcctgatgagaccaaggacctctcttcagagccctgcttgaccaatggttt 11889548

                                
Query: 356      tgcaggtggaggaagc 371
                ||| ||||||| ||||
Sbjct: 11889549 tgcgggtggagaaagc 11889564



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                         
Query: 212      acaacctgtacacaccaacaacaatcgagaaactgtacaga 252
                |||||||||||||| ||| ||||||| ||||||||||||||
Sbjct: 11889405 acaacctgtacacatcaagaacaatcaagaaactgtacaga 11889445



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                               
Query: 418      gttctggctgcttcgtgtatgtgaactgcaggtccttgttcgcagcc 464
                ||||||| | ||| |||||  |||||||||| |||||||||||||||
Sbjct: 11889620 gttctggtttcttggtgtagttgaactgcagatccttgttcgcagcc 11889666
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>gb|AC137070.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0035J18, from chromsome 3, complete sequence
          Length = 162711

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Minus

                                                                         
Query: 296   atctcatcttcctgatgagaccaaggtcctctctccggaaccctgccgaaccaatggttt 355
             ||||||||| |||||||||||||||| ||||||| | || ||||||   |||||||||||
Sbjct: 17927 atctcatctgcctgatgagaccaaggacctctcttcagagccctgcttgaccaatggttt 17868

                             
Query: 356   tgcaggtggaggaagc 371
             ||| ||||||| ||||
Sbjct: 17867 tgcgggtggagaaagc 17852



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                      
Query: 212   acaacctgtacacaccaacaacaatcgagaaactgtacaga 252
             |||||||||||||| ||| ||||||| ||||||||||||||
Sbjct: 18011 acaacctgtacacatcaagaacaatcaagaaactgtacaga 17971



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 418   gttctggctgcttcgtgtatgtgaactgcaggtccttgttcgcagcc 464
             ||||||| | ||| |||||  |||||||||| |||||||||||||||
Sbjct: 17796 gttctggtttcttggtgtagttgaactgcagatccttgttcgcagcc 17750
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>dbj|AK058426.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-E02, full
           insert sequence
          Length = 607

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Minus

                                                                       
Query: 296 atctcatcttcctgatgagaccaaggtcctctctccggaaccctgccgaaccaatggttt 355
           ||||||||| |||||||||||||||| ||||||| | || ||||||   |||||||||||
Sbjct: 338 atctcatctgcctgatgagaccaaggacctctcttcagagccctgcttgaccaatggttt 279

                           
Query: 356 tgcaggtggaggaagc 371
           ||| ||||||| ||||
Sbjct: 278 tgcgggtggagaaagc 263



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 212 acaacctgtacacaccaacaacaatcgagaaactgtacaga 252
           |||||||||||||| ||| ||||||| ||||||||||||||
Sbjct: 422 acaacctgtacacatcaagaacaatcaagaaactgtacaga 382



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 418 gttctggctgcttcgtgtatgtgaactgcaggtccttgttcgcagcc 464
           ||||||| | ||| |||||  |||||||||| |||||||||||||||
Sbjct: 207 gttctggtttcttggtgtagttgaactgcagatccttgttcgcagcc 161
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>gb|AY106877.1| Zea mays PCO149877 mRNA sequence
          Length = 743

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 425 ctgcttcgtgtatgtgaactgcaggtccttgtt 457
           |||||||| ||| ||||||||||||||||||||
Sbjct: 211 ctgcttcgcgtaggtgaactgcaggtccttgtt 179
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>gb|BT018452.1| Zea mays clone EL01N0408A12.d mRNA sequence
          Length = 1457

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 428 cttcgtgtatgtgaactgcaggtccttgtt 457
           ||||| ||| ||||||||||||||||||||
Sbjct: 771 cttcgcgtaggtgaactgcaggtccttgtt 742
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>gb|AC019046.4|AC019046 Homo sapiens BAC clone RP11-71D23 from 2, complete sequence
          Length = 177703

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 87     acccacaacacttgctggtact 108
              ||||||||||||||||||||||
Sbjct: 165964 acccacaacacttgctggtact 165985
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>dbj|AB209681.1| Homo sapiens mRNA for RAP guanine-nucleotide-exchange factor 4
            variant protein
          Length = 6400

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 87   acccacaacacttgctggtact 108
            ||||||||||||||||||||||
Sbjct: 1492 acccacaacacttgctggtact 1471
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>ref|NM_102411.1| Arabidopsis thaliana GRF12; protein phosphorylated amino acid binding
            AT1G26480 (GRF12) mRNA, complete cds
          Length = 1153

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 296  atctcatcttcctgatgagaccaag 320
            |||||||||||||||||| ||||||
Sbjct: 1013 atctcatcttcctgatgaaaccaag 989
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>gb|AY085338.1| Arabidopsis thaliana clone 146580 mRNA, complete sequence
          Length = 1153

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 296  atctcatcttcctgatgagaccaag 320
            |||||||||||||||||| ||||||
Sbjct: 1013 atctcatcttcctgatgaaaccaag 989
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>gb|AC013427.3|T1K7 Sequence of BAC T1K7 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 89473

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 296   atctcatcttcctgatgagaccaag 320
             |||||||||||||||||| ||||||
Sbjct: 43971 atctcatcttcctgatgaaaccaag 43947
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>dbj|AK117907.1| Arabidopsis thaliana At1g26480 mRNA for putative 14-3-3 protein
            epsilon, complete cds, clone: RAFL19-09-C10
          Length = 1152

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 296  atctcatcttcctgatgagaccaag 320
            |||||||||||||||||| ||||||
Sbjct: 1012 atctcatcttcctgatgaaaccaag 988
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>gb|AF235103.5| Homo sapiens chromosome 8 multiple clones map q24.3, complete sequence
          Length = 345524

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 374    tgggctcccaggagcaatga 393
              ||||||||||||||||||||
Sbjct: 237512 tgggctcccaggagcaatga 237531
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>emb|AL157879.7| Human DNA sequence from clone RP11-110H4 on chromosome 5, complete
              sequence
          Length = 161460

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 162    aagtagtaaaaaatctaccaagcc 185
              ||||| ||||||||||||||||||
Sbjct: 141676 aagtaataaaaaatctaccaagcc 141699
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>gb|AC093243.2| Homo sapiens chromosome 5 clone RP11-110H4, complete sequence
          Length = 161460

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 162    aagtagtaaaaaatctaccaagcc 185
              ||||| ||||||||||||||||||
Sbjct: 141676 aagtaataaaaaatctaccaagcc 141699
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>gb|AC104914.9| Mus musculus chromosome 9, clone RP23-108E20, complete sequence
          Length = 260181

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     catacaatttactggcagag 82
              ||||||||||||||||||||
Sbjct: 110280 catacaatttactggcagag 110261
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>gb|AC140139.2| Homo sapiens chromosome 5 clone RP11-1417I21, complete sequence
          Length = 216245

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 162   aagtagtaaaaaatctaccaagcc 185
             ||||| ||||||||||||||||||
Sbjct: 98159 aagtaataaaaaatctaccaagcc 98182
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>gb|AC139776.2| Homo sapiens chromosome 5 clone RP11-1005E12, complete sequence
          Length = 217545

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 162   aagtagtaaaaaatctaccaagcc 185
             ||||| ||||||||||||||||||
Sbjct: 85238 aagtaataaaaaatctaccaagcc 85261
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>gb|AC139495.2| Homo sapiens chromosome 5 clone RP11-848G14, complete sequence
          Length = 185911

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 162   aagtagtaaaaaatctaccaagcc 185
             ||||| ||||||||||||||||||
Sbjct: 96879 aagtaataaaaaatctaccaagcc 96902
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>gb|AC139272.3| Homo sapiens chromosome 5 clone RP11-589F5, complete sequence
          Length = 179723

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 162   aagtagtaaaaaatctaccaagcc 185
             ||||| ||||||||||||||||||
Sbjct: 69715 aagtaataaaaaatctaccaagcc 69738
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>gb|AC138959.2| Homo sapiens chromosome 5 clone RP11-880C13, complete sequence
          Length = 186787

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 162    aagtagtaaaaaatctaccaagcc 185
              ||||| ||||||||||||||||||
Sbjct: 149785 aagtaataaaaaatctaccaagcc 149808
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>gb|AC138866.2| Homo sapiens chromosome 5 clone RP11-1415C14, complete sequence
          Length = 213824

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 162    aagtagtaaaaaatctaccaagcc 185
              ||||| ||||||||||||||||||
Sbjct: 164922 aagtaataaaaaatctaccaagcc 164945
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>gb|AC146949.1| Homo sapiens chromosome 5 clone RP11-1198D22, complete sequence
          Length = 205574

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 162   aagtagtaaaaaatctaccaagcc 185
             ||||| ||||||||||||||||||
Sbjct: 40929 aagtaataaaaaatctaccaagcc 40906
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>gb|AC145129.2| Homo sapiens chromosome 5 clone RP11-1080P5, complete sequence
          Length = 171363

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 162    aagtagtaaaaaatctaccaagcc 185
              ||||| ||||||||||||||||||
Sbjct: 166442 aagtaataaaaaatctaccaagcc 166465
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>gb|AC145034.2| Homo sapiens chromosome 5 clone RP11-1414O21, complete sequence
          Length = 210205

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 162    aagtagtaaaaaatctaccaagcc 185
              ||||| ||||||||||||||||||
Sbjct: 183934 aagtaataaaaaatctaccaagcc 183911



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 162   aagtagtaaaaaatctaccaagcc 185
             ||||| ||||||||||||||||||
Sbjct: 64302 aagtaataaaaaatctaccaagcc 64325
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>gb|AC146944.1| Homo sapiens chromosome 5 clone RP11-497H16, complete sequence
          Length = 196579

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 162    aagtagtaaaaaatctaccaagcc 185
              ||||| ||||||||||||||||||
Sbjct: 191658 aagtaataaaaaatctaccaagcc 191681



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 162   aagtagtaaaaaatctaccaagcc 185
             ||||| ||||||||||||||||||
Sbjct: 15715 aagtaataaaaaatctaccaagcc 15692
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>gb|AC138957.2| Homo sapiens chromosome 5 clone RP11-846E4, complete sequence
          Length = 177801

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 162    aagtagtaaaaaatctaccaagcc 185
              ||||| ||||||||||||||||||
Sbjct: 129617 aagtaataaaaaatctaccaagcc 129640
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>gb|AC139505.2| Homo sapiens chromosome 5 clone RP11-910M8, complete sequence
          Length = 202970

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 162   aagtagtaaaaaatctaccaagcc 185
             ||||| ||||||||||||||||||
Sbjct: 94408 aagtaataaaaaatctaccaagcc 94385
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>gb|AC138928.2| Homo sapiens chromosome 5 clone RP11-674O19, complete sequence
          Length = 166615

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 162    aagtagtaaaaaatctaccaagcc 185
              ||||| ||||||||||||||||||
Sbjct: 129616 aagtaataaaaaatctaccaagcc 129639
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>gb|AC145144.2| Homo sapiens chromosome 5 clone RP11-1432L1, complete sequence
          Length = 211638

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 162   aagtagtaaaaaatctaccaagcc 185
             ||||| ||||||||||||||||||
Sbjct: 65723 aagtaataaaaaatctaccaagcc 65700
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>gb|AC145102.2| Homo sapiens chromosome 5 clone RP11-696L12, complete sequence
          Length = 186481

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 162   aagtagtaaaaaatctaccaagcc 185
             ||||| ||||||||||||||||||
Sbjct: 37000 aagtaataaaaaatctaccaagcc 36977
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>gb|AC139510.3| Homo sapiens chromosome 5 clone RP11-977J23, complete sequence
          Length = 179309

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 162   aagtagtaaaaaatctaccaagcc 185
             ||||| ||||||||||||||||||
Sbjct: 32424 aagtaataaaaaatctaccaagcc 32401
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>gb|AC139507.2| Homo sapiens chromosome 5 clone RP11-937A6, complete sequence
          Length = 175073

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 162    aagtagtaaaaaatctaccaagcc 185
              ||||| ||||||||||||||||||
Sbjct: 121681 aagtaataaaaaatctaccaagcc 121704
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>emb|AL158839.11| Human DNA sequence from clone RP11-180O5 on chromosome 1 Contains the
             5' end of gene DKFZP566D1346, the HHLA3 gene for HERV-H
             LTR-associating 3 and a novel gene, complete sequence
          Length = 70110

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   gagaaagtacaacctgtaca 223
             ||||||||||||||||||||
Sbjct: 57240 gagaaagtacaacctgtaca 57221
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>gb|AC139463.2| Homo sapiens chromosome 5 clone RPCI-11_1264N5, complete sequence
          Length = 202179

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 162   aagtagtaaaaaatctaccaagcc 185
             ||||| ||||||||||||||||||
Sbjct: 45404 aagtaataaaaaatctaccaagcc 45427
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>gb|AC139277.2| Homo sapiens chromosome 5 clone RP11-619K7, complete sequence
          Length = 199996

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 162  aagtagtaaaaaatctaccaagcc 185
            ||||| ||||||||||||||||||
Sbjct: 4926 aagtaataaaaaatctaccaagcc 4903
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>gb|AC138911.2| Homo sapiens chromosome 5 clone RP11-618O22, complete sequence
          Length = 191992

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 162    aagtagtaaaaaatctaccaagcc 185
              ||||| ||||||||||||||||||
Sbjct: 125931 aagtaataaaaaatctaccaagcc 125954
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>emb|AL133255.14| Human DNA sequence from clone RP11-239L20 on chromosome 6 Contains the
             gene for a novel protein similar to spinal muscular
             atrophy region protein SMA3, a beta glucuronidase (GUSB)
             pseudogene, a pseudogene similar to nuclear envelope pore
             membrane protein POM121 (NUP121) ESTs, STSs, GSSs and a
             CpG island, complete sequence
          Length = 152782

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 162   aagtagtaaaaaatctaccaagcc 185
             ||||| ||||||||||||||||||
Sbjct: 93334 aagtaataaaaaatctaccaagcc 93357
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>gb|AC139492.2| Homo sapiens chromosome 5 clone RP11-842C12, complete sequence
          Length = 184826

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 162   aagtagtaaaaaatctaccaagcc 185
             ||||| ||||||||||||||||||
Sbjct: 17317 aagtaataaaaaatctaccaagcc 17340
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>gb|AC132802.2| Homo sapiens chromosome 5 clone CTC-273M15, complete sequence
          Length = 162703

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 162    aagtagtaaaaaatctaccaagcc 185
              ||||| ||||||||||||||||||
Sbjct: 134054 aagtaataaaaaatctaccaagcc 134077
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>gb|AC139103.3| Homo sapiens chromosome 8, clone, complete sequence
          Length = 166920

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 374    tgggctcccaggagcaatga 393
              ||||||||||||||||||||
Sbjct: 116710 tgggctcccaggagcaatga 116691
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>emb|AL009030.15|HS28I24 Human DNA sequence from clone RP1-28I24 on chromosome 5 Contains the 5'
             end of the spinal muscular dystrophy region gene (SMA3),
             two beta-glucuronidase pseudogenes and two novel
             pseudogenes containing four membrane protein-like protein
             repeats, one CpG islands, ESTs, GSSs and STSs, complete
             sequence
          Length = 222252

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 162   aagtagtaaaaaatctaccaagcc 185
             ||||| ||||||||||||||||||
Sbjct: 89256 aagtaataaaaaatctaccaagcc 89279
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>gb|AC105449.8| Homo sapiens chromosome 8, clone RP11-152B5, complete sequence
          Length = 159789

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 374   tgggctcccaggagcaatga 393
             ||||||||||||||||||||
Sbjct: 68540 tgggctcccaggagcaatga 68521
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>gb|AC182492.2| Pan troglodytes BAC clone CH251-294F23 from chromosome 5, complete
             sequence
          Length = 179551

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 162   aagtagtaaaaaatctaccaagcc 185
             ||||| ||||||||||||||||||
Sbjct: 82308 aagtaataaaaaatctaccaagcc 82285
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>gb|AC108149.4| Homo sapiens BAC clone RP11-473D12 from 4, complete sequence
          Length = 86324

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 295   aatctcatcttcctgatgag 314
             ||||||||||||||||||||
Sbjct: 36598 aatctcatcttcctgatgag 36579
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>gb|AC093247.3| Homo sapiens chromosome 5 clone RP11-138M1, complete sequence
          Length = 80828

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 162   aagtagtaaaaaatctaccaagcc 185
             ||||| ||||||||||||||||||
Sbjct: 32676 aagtaataaaaaatctaccaagcc 32653
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>gb|AC139500.2| Homo sapiens chromosome 5 clone RP11-864E4, complete sequence
          Length = 194350

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 162    aagtagtaaaaaatctaccaagcc 185
              ||||| ||||||||||||||||||
Sbjct: 105232 aagtaataaaaaatctaccaagcc 105255
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>gb|AC140175.2| Homo sapiens chromosome 5 clone RP11-833G1, complete sequence
          Length = 161671

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 162   aagtagtaaaaaatctaccaagcc 185
             ||||| ||||||||||||||||||
Sbjct: 95600 aagtaataaaaaatctaccaagcc 95623
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>gb|AC108108.2| Homo sapiens chromosome 5 clone RP11-260M21, complete sequence
          Length = 173597

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 162   aagtagtaaaaaatctaccaagcc 185
             ||||| ||||||||||||||||||
Sbjct: 64746 aagtaataaaaaatctaccaagcc 64769
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>gb|AC138951.2| Homo sapiens chromosome 5 clone RP11-823P9, complete sequence
          Length = 223346

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 162    aagtagtaaaaaatctaccaagcc 185
              ||||| ||||||||||||||||||
Sbjct: 183429 aagtaataaaaaatctaccaagcc 183452
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>gb|AF327113.1|AF327113 Homo sapiens clone 8qtel_c9t7 sequence
          Length = 708

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 374 tgggctcccaggagcaatga 393
           ||||||||||||||||||||
Sbjct: 192 tgggctcccaggagcaatga 211
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>gb|AC138821.2| Homo sapiens chromosome 5 clone RP11-1104E16, complete sequence
          Length = 182236

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 162   aagtagtaaaaaatctaccaagcc 185
             ||||| ||||||||||||||||||
Sbjct: 48675 aagtaataaaaaatctaccaagcc 48698
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>gb|AC137781.2| Homo sapiens chromosome 5 clone RP11-1108I11, complete sequence
          Length = 161893

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 162   aagtagtaaaaaatctaccaagcc 185
             ||||| ||||||||||||||||||
Sbjct: 66723 aagtaataaaaaatctaccaagcc 66746
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>gb|AC138410.1| Homo sapiens chromosome 5 clone RP11-1124O10, complete sequence
          Length = 152445

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 162    aagtagtaaaaaatctaccaagcc 185
              ||||| ||||||||||||||||||
Sbjct: 140950 aagtaataaaaaatctaccaagcc 140973
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>gb|AC138409.1| Homo sapiens chromosome 5 clone RP11-1023L17, complete sequence
          Length = 187740

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 162    aagtagtaaaaaatctaccaagcc 185
              ||||| ||||||||||||||||||
Sbjct: 146387 aagtaataaaaaatctaccaagcc 146410
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>gb|AC131392.2| Homo sapiens chromosome 5 clone RP11-98J23, complete sequence
          Length = 154803

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 162   aagtagtaaaaaatctaccaagcc 185
             ||||| ||||||||||||||||||
Sbjct: 84175 aagtaataaaaaatctaccaagcc 84198
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>gb|AC144461.33| Mus musculus strain C57BL/6J clone rp23-427m23, complete sequence
          Length = 164848

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   aaaaaatctaccaagcctgc 188
             ||||||||||||||||||||
Sbjct: 71387 aaaaaatctaccaagcctgc 71406
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>dbj|AP005976.2| Homo sapiens genomic DNA, chromosome 8qtel, clone: KB1585H8, complete
             sequence
          Length = 226221

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 374   tgggctcccaggagcaatga 393
             ||||||||||||||||||||
Sbjct: 86922 tgggctcccaggagcaatga 86941
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>gb|AC150681.2| Mus musculus BAC clone RP24-490A22 from 7, complete sequence
          Length = 195652

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    gcagaggattacccacaaca 96
             ||||||||||||||||||||
Sbjct: 91513 gcagaggattacccacaaca 91532
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>gb|AC132801.2| Homo sapiens chromosome 5 clone CTC-202O15, complete sequence
          Length = 116702

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 162   aagtagtaaaaaatctaccaagcc 185
             ||||| ||||||||||||||||||
Sbjct: 99469 aagtaataaaaaatctaccaagcc 99492


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,575,831
Number of Sequences: 3902068
Number of extensions: 3575831
Number of successful extensions: 66551
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66422
Number of HSP's gapped (non-prelim): 129
length of query: 467
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 445
effective length of database: 17,147,199,772
effective search space: 7630503898540
effective search space used: 7630503898540
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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