>RECA_MYCTH (Q9F407) Protein recA (Recombinase A) [Contains: Mth recA intein]|
           (Fragment)
          Length = 424

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 160 GTSDQAPQGKQNALLGLGHGADQVD 234
           GT    P+G+      +GHGAD+VD
Sbjct: 132 GTLSPDPRGRNGVRFRMGHGADRVD 156

>SFMA_ECOLI (P0ABW5) Sfm fimbrial protein, A chain precursor (Type-1A pilin)|
          Length = 180

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 79  KTNGNSCPTNMNQASSDPIHIYSHKQRGTSDQAPQGKQNA 198
           K +GNS  TN N      +  +S + +GT   A  G+ NA
Sbjct: 132 KPDGNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQANA 171

>SFMA_ECO57 (P0ABW6) Sfm fimbrial protein, A chain precursor (Type-1A pilin)|
          Length = 180

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 79  KTNGNSCPTNMNQASSDPIHIYSHKQRGTSDQAPQGKQNA 198
           K +GNS  TN N      +  +S + +GT   A  G+ NA
Sbjct: 132 KPDGNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQANA 171


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,223,419
Number of Sequences: 219361
Number of extensions: 720323
Number of successful extensions: 1593
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1593
length of database: 80,573,946
effective HSP length: 54
effective length of database: 68,728,452
effective search space used: 1649482848
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)