Clone Name | rbart08g10 |
---|---|
Clone Library Name | barley_pub |
>RLA0_ORYSA (P41095) 60S acidic ribosomal protein P0| Length = 318 Score = 113 bits (283), Expect = 2e-25 Identities = 55/62 (88%), Positives = 60/62 (96%) Frame = -1 Query: 491 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 312 DLM+KFASGVSMVAS+SLAISYPT+AAAPHMFLN YKNVLAVA+ET+YSY HADKIKEYL Sbjct: 212 DLMEKFASGVSMVASVSLAISYPTIAAAPHMFLNGYKNVLAVAVETEYSYPHADKIKEYL 271 Query: 311 KD 306 KD Sbjct: 272 KD 273
>RLA0_MAIZE (O24573) 60S acidic ribosomal protein P0| Length = 318 Score = 113 bits (282), Expect = 3e-25 Identities = 62/108 (57%), Positives = 68/108 (62%) Frame = -1 Query: 491 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 312 DL++KFA+GVSMVASLSLAISYPT+AA PHMF+N YKNVLAVA+ETDYSY HADKIKEYL Sbjct: 212 DLIEKFATGVSMVASLSLAISYPTLAAVPHMFINGYKNVLAVAVETDYSYPHADKIKEYL 271 Query: 311 KDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMGFSLFDD 168 KD EMGFSLFDD Sbjct: 272 KD-PSKFAVAAPVAAGDSGASAAPKEEEKAAEPEEESDEEMGFSLFDD 318
>RLA0_SOYBN (P50346) 60S acidic ribosomal protein P0| Length = 320 Score = 107 bits (266), Expect = 2e-23 Identities = 58/108 (53%), Positives = 66/108 (61%), Gaps = 1/108 (0%) Frame = -1 Query: 491 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 312 DL+ KFA+GVSMV SLSLAISYPT+AAAPHMF+NAYKNVLAVA+ETDYS+ ADK+KEYL Sbjct: 213 DLIGKFAAGVSMVTSLSLAISYPTLAAAPHMFVNAYKNVLAVAVETDYSFPEADKVKEYL 272 Query: 311 KD-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMGFSLFD 171 KD +MGFSLFD Sbjct: 273 KDPSKFAVAAVAAPAAASGAPAAAAKEEEKKEEPAEESDDDMGFSLFD 320
>RLA0A_ARATH (O04204) 60S acidic ribosomal protein P0-A| Length = 317 Score = 99.4 bits (246), Expect = 5e-21 Identities = 46/62 (74%), Positives = 57/62 (91%) Frame = -1 Query: 491 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 312 DL++KFA+GVSM+ +LSLAISYPT+AAAPHMFLNAYKNVLAVAL T+YS+ A+ +KE+L Sbjct: 213 DLVEKFAAGVSMITALSLAISYPTVAAAPHMFLNAYKNVLAVALATEYSFPQAENVKEFL 272 Query: 311 KD 306 KD Sbjct: 273 KD 274
>RLA0B_ARATH (Q42112) 60S acidic ribosomal protein P0-B| Length = 320 Score = 96.7 bits (239), Expect = 3e-20 Identities = 42/61 (68%), Positives = 56/61 (91%) Frame = -1 Query: 488 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 309 L++KFASG+SMV SL+LA+SYPT+AAAPHMF+NAYKN LA+A+ T+Y++ A+K+KEYLK Sbjct: 213 LVEKFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVATEYTFPQAEKVKEYLK 272 Query: 308 D 306 D Sbjct: 273 D 273
>RLA0C_ARATH (P57691) 60S acidic ribosomal protein P0-C| Length = 323 Score = 96.7 bits (239), Expect = 3e-20 Identities = 42/61 (68%), Positives = 56/61 (91%) Frame = -1 Query: 488 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 309 L++KFASG+SMV SL+LA+SYPT+AAAPHMF+NAYKN LA+A+ TDY++ A+K+KE+LK Sbjct: 213 LVEKFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVATDYTFPQAEKVKEFLK 272 Query: 308 D 306 D Sbjct: 273 D 273
>RLA0_LUPLU (P50345) 60S acidic ribosomal protein P0| Length = 322 Score = 74.3 bits (181), Expect = 2e-13 Identities = 42/110 (38%), Positives = 54/110 (49%), Gaps = 2/110 (1%) Frame = -1 Query: 491 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 312 DL++KFA GVS + P +AAPH+F+NAYKNVLAVA+ T+YS+ AD++KEYL Sbjct: 213 DLLEKFAIGVSQCYFSDTSHFIPNPSAAPHVFINAYKNVLAVAVATEYSFPQADEVKEYL 272 Query: 311 KDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXEMGFSLFDD 168 KD EMGF LFD+ Sbjct: 273 KDPSKFAAVAAAAAPAADSGAAPAAAAKAEKEEEPAEESDDEMGFGLFDE 322
>RLA0_BRARE (Q9PV90) 60S acidic ribosomal protein P0 (L10E)| Length = 319 Score = 71.6 bits (174), Expect = 1e-12 Identities = 37/106 (34%), Positives = 49/106 (46%) Frame = -1 Query: 488 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 309 L +F GV +AS+ L I YPT+A+ PH +N YK VLAV +ETDY++ A+K+K YL Sbjct: 214 LHKRFLKGVRNIASVCLQIGYPTLASIPHTIINGYKRVLAVTVETDYTFPLAEKVKAYLA 273 Query: 308 DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMGFSLFD 171 D +MGF LFD Sbjct: 274 DPTAFAVAAPVAAATEQKSAAPAAKEEAPKEDSEESDEDMGFGLFD 319
>RLA0_CHICK (P47826) 60S acidic ribosomal protein P0 (L10E)| Length = 316 Score = 71.2 bits (173), Expect = 1e-12 Identities = 38/106 (35%), Positives = 50/106 (47%) Frame = -1 Query: 488 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 309 L +F GV VAS+ L I YPT+A+ PH +N YK VLAVA+ETDY++ A+K+K +L Sbjct: 211 LHKRFLEGVRNVASVCLQIGYPTIASVPHSIVNGYKRVLAVAVETDYTFPLAEKVKAFLA 270 Query: 308 DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMGFSLFD 171 D +MGF LFD Sbjct: 271 DPSAFVAAAPVVVETAAPAAAAAPAKEAPKEESEESDEDMGFGLFD 316
>RLA0_ICTPU (Q90YX1) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 69.7 bits (169), Expect = 4e-12 Identities = 32/61 (52%), Positives = 42/61 (68%) Frame = -1 Query: 488 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 309 L +F GV +AS+ L I YPT+A+ PH +N YK VL VA+ETDYS+ ADK+K +L Sbjct: 211 LHKRFLEGVRNIASVCLQIGYPTLASIPHSIINGYKRVLRVAVETDYSFPMADKVKAFLA 270 Query: 308 D 306 D Sbjct: 271 D 271
>RLA0_RANSY (Q9DG68) 60S acidic ribosomal protein P0 (L10E)| Length = 315 Score = 69.3 bits (168), Expect = 5e-12 Identities = 32/61 (52%), Positives = 43/61 (70%) Frame = -1 Query: 488 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 309 L +F GV +AS+ L I YPT+A+ PH +N YK VLA+A+ETDYS+ ADK+K +L Sbjct: 211 LRARFLEGVRNIASVCLQIGYPTVASVPHSVVNGYKRVLALAVETDYSFPLADKVKAFLA 270 Query: 308 D 306 D Sbjct: 271 D 271
>RLA0_DICDI (P22685) 60S acidic ribosomal protein P0| Length = 305 Score = 68.2 bits (165), Expect = 1e-11 Identities = 28/57 (49%), Positives = 44/57 (77%) Frame = -1 Query: 491 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 321 DL++KF G+ +A++SL I YPT+A+ PH +NA+KN+LA++ ET Y++D A+K K Sbjct: 206 DLINKFKQGIFNIAAISLEIGYPTVASIPHSVMNAFKNLLAISFETSYTFDAAEKFK 262
>RLA0_RAT (P19945) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 67.4 bits (163), Expect = 2e-11 Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 1/107 (0%) Frame = -1 Query: 488 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 309 L +F GV VAS+ L I YPT+A+ PH +N YK VLA+++ETDY++ A+K+K +L Sbjct: 211 LHTRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLA 270 Query: 308 D-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMGFSLFD 171 D +MGF LFD Sbjct: 271 DPSAFAAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>RLA0_HUMAN (P05388) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 67.4 bits (163), Expect = 2e-11 Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 1/107 (0%) Frame = -1 Query: 488 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 309 L +F GV VAS+ L I YPT+A+ PH +N YK VLA+++ETDY++ A+K+K +L Sbjct: 211 LHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLA 270 Query: 308 D-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMGFSLFD 171 D +MGF LFD Sbjct: 271 DPSAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>RLA0_BOVIN (Q95140) 60S acidic ribosomal protein P0 (L10E) (Fragment)| Length = 309 Score = 67.0 bits (162), Expect = 3e-11 Identities = 30/61 (49%), Positives = 43/61 (70%) Frame = -1 Query: 488 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 309 L +F GV VAS+ L I YPT+A+ PH +N YK VLA+++ETDY++ A+K+K +L Sbjct: 202 LHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLA 261 Query: 308 D 306 D Sbjct: 262 D 262
>RLA0_CERCA (Q9U3U0) 60S acidic ribosomal protein P0 (CcP0)| Length = 317 Score = 66.6 bits (161), Expect = 3e-11 Identities = 30/62 (48%), Positives = 44/62 (70%) Frame = -1 Query: 491 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 312 DL KF +GV+ +A++SL I YPT+A+APH N +KN+LA+A T+ + A IKE++ Sbjct: 210 DLRAKFQAGVANLAAVSLQIGYPTIASAPHSIANGFKNLLAIAASTEVEFKQAATIKEFI 269 Query: 311 KD 306 KD Sbjct: 270 KD 271
>RLA0_DROME (P19889) 60S acidic ribosomal protein P0 (DNA-(apurinic or| apyrimidinic site) lyase) (EC 4.2.99.18) (Apurinic-apyrimidinic endonuclease) Length = 317 Score = 66.2 bits (160), Expect = 4e-11 Identities = 29/62 (46%), Positives = 43/62 (69%) Frame = -1 Query: 491 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 312 DL KF GV+ +A++ L++ YPT+A+APH N +KN+LA+A T+ + A IKEY+ Sbjct: 210 DLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYI 269 Query: 311 KD 306 KD Sbjct: 270 KD 271
>RLA0_MOUSE (P14869) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 65.5 bits (158), Expect = 8e-11 Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 1/107 (0%) Frame = -1 Query: 488 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 309 L +F GV VAS+ L I YPT+A+ PH +N YK VLA+++ET+Y++ +K+K +L Sbjct: 211 LHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETEYTFPLTEKVKAFLA 270 Query: 308 D-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMGFSLFD 171 D +MGF LFD Sbjct: 271 DPSAFAAAAPAAAATTAAPAAAAAPAKAEAKEESEESDEDMGFGLFD 317
>RLA0_CAEEL (Q93572) 60S acidic ribosomal protein P0| Length = 311 Score = 59.7 bits (143), Expect = 4e-09 Identities = 28/62 (45%), Positives = 41/62 (66%) Frame = -1 Query: 491 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 312 +L +F SGV VAS+SLA++YPT+A+ H N +N+L VA TD S+ A+ IK ++ Sbjct: 209 ELRKRFLSGVRNVASVSLAVNYPTLASVAHSLANGLQNMLGVAAVTDVSFKEAETIKAFI 268 Query: 311 KD 306 D Sbjct: 269 AD 270
>RLA0_NEUCR (Q96TJ5) 60S acidic ribosomal protein P0| Length = 313 Score = 57.4 bits (137), Expect = 2e-08 Identities = 24/57 (42%), Positives = 43/57 (75%) Frame = -1 Query: 488 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKE 318 L+ F++ ++ +ASLSLA+++PT+ + H +NAYK VLAVA+ET+ S+ +++K+ Sbjct: 209 LLKAFSTAITTIASLSLALNFPTLPSVIHSVVNAYKKVLAVAIETEISWPEIEELKD 265
>RLA0_SCHPO (O74864) 60S acidic ribosomal protein P0| Length = 312 Score = 56.2 bits (134), Expect = 5e-08 Identities = 23/62 (37%), Positives = 42/62 (67%) Frame = -1 Query: 491 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 312 DL+ S S++ ++SL +YPT+ + H +NAYKN++AV+L T+Y+++ ++ K +L Sbjct: 208 DLIGHLLSAASIITAISLGANYPTILSVMHSVVNAYKNLVAVSLATEYTFEGTEQTKAFL 267 Query: 311 KD 306 D Sbjct: 268 AD 269
>RLA0_PLAF8 (Q94660) 60S acidic ribosomal protein P0| Length = 316 Score = 55.5 bits (132), Expect = 8e-08 Identities = 28/107 (26%), Positives = 52/107 (48%) Frame = -1 Query: 491 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 312 D+++KF+ GVS VA+LS A T A+ PH+F+ A+KN++A+ +++DY++ +K+++ Sbjct: 210 DILEKFSKGVSNVAALSRATGVITEASYPHVFVEAFKNIVALIIDSDYTFPLMKILKKWV 269 Query: 311 KDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMGFSLFD 171 ++ MGF +FD Sbjct: 270 ENPEAFAAVAAPASAAKADEPKKEEAKKVEEEEEEEEDGFMGFGMFD 316
>RLA0_PODAN (Q9C3Z6) 60S acidic ribosomal protein P0| Length = 314 Score = 55.5 bits (132), Expect = 8e-08 Identities = 22/57 (38%), Positives = 43/57 (75%) Frame = -1 Query: 488 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKE 318 L+ F+S ++ +A++SLA+++PT+ + H +N+YK VLAVA+ET+ S+ +++K+ Sbjct: 209 LLKAFSSAITTIAAVSLALNFPTLPSVIHSLVNSYKKVLAVAIETEISWPEIEELKD 265
>RLA0_YEAST (P05317) 60S acidic ribosomal protein P0 (L10E)| Length = 312 Score = 55.1 bits (131), Expect = 1e-07 Identities = 24/62 (38%), Positives = 40/62 (64%) Frame = -1 Query: 491 DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 312 +L+ F S VS +AS+SLAI YPT+ + H +N YK++LAVA+ Y Y + + + + Sbjct: 208 ELVSHFVSAVSTIASISLAIGYPTLPSVGHTLINNYKDLLAVAIAASYHYPEIEDLVDRI 267 Query: 311 KD 306 ++ Sbjct: 268 EN 269
>RLA0_EIMTE (Q967Y7) 60S acidic ribosomal protein P0| Length = 314 Score = 52.4 bits (124), Expect = 7e-07 Identities = 28/106 (26%), Positives = 49/106 (46%) Frame = -1 Query: 488 LMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 309 +++ FA+G + VA++S A+ P+ AAAPH L A++N A+ L+T + + ++KE ++ Sbjct: 210 ILEAFAAGAANVAAVSRAVGLPSAAAAPHSILEAFRNCAALCLDTPFCFPQMQRLKEMVE 269 Query: 308 DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMGFSLFD 171 + +MGFSLFD Sbjct: 270 N-PAAFAAAAAPAAAAPAAAPAAAAKAPEPEEEEEEDGDMGFSLFD 314
>RLA0_CHERU (P29764) 60S acidic ribosomal protein P0 (Light-induced 34 kDa| protein) Length = 321 Score = 51.6 bits (122), Expect = 1e-06 Identities = 24/30 (80%), Positives = 28/30 (93%) Frame = -1 Query: 491 DLMDKFASGVSMVASLSLAISYPTMAAAPH 402 DL+ +FA+GVSMV SLSLAISYPT+AAAPH Sbjct: 213 DLLARFATGVSMVTSLSLAISYPTLAAAPH 242
>RLA0_TRYCR (P26796) 60S acidic ribosomal protein P0| Length = 323 Score = 49.7 bits (117), Expect = 4e-06 Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 1/55 (1%) Frame = -1 Query: 491 DLMDKFA-SGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHAD 330 D+++K+ G+S VA+LSL PT A PHM ++A+K +L ++ T+Y +D D Sbjct: 216 DVVEKYLLEGISNVAALSLGAGIPTAATLPHMIMDAFKTLLGASVATEYEFDEFD 270
>RLA0_LEIIN (P39097) 60S acidic ribosomal protein P0| Length = 323 Score = 38.9 bits (89), Expect = 0.008 Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 1/52 (1%) Frame = -1 Query: 491 DLMDKFA-SGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYD 339 D+++K G+S VA+++L PT + M ++A+KN+LAV++ T Y ++ Sbjct: 216 DMVEKMLMEGLSNVAAMALGAGIPTSSTIGPMLVDAFKNLLAVSVATSYEFE 267
>RLA0_LEICH (P39096) 60S acidic ribosomal protein P0| Length = 322 Score = 38.9 bits (89), Expect = 0.008 Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 1/52 (1%) Frame = -1 Query: 491 DLMDKFA-SGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYD 339 D+++K G+S VA+++L PT + M ++A+KN+LAV++ T Y ++ Sbjct: 215 DMVEKMLMEGLSNVAAMALGAGIPTSSTIGPMLVDAFKNLLAVSVATSYEFE 266
>O10A7_HUMAN (Q8NGE5) Olfactory receptor 10A7| Length = 316 Score = 29.3 bits (64), Expect = 6.0 Identities = 13/52 (25%), Positives = 26/52 (50%) Frame = -3 Query: 159 VLSFIKPCPVASFV*CSTLKFFKSYYYLEQELVMLFVSVYSNMLMLCHALIY 4 ++ + P + SFV C T +F +++ E +L + Y + +C+ L Y Sbjct: 82 LVDLVSPRKIISFVGCGTQMYF-FFFFGSSECFLLSMMAYDRFVAICNPLHY 132
>OR8BC_HUMAN (Q8NGG6) Olfactory receptor 8B12 (Olfactory receptor OR11-317)| Length = 310 Score = 29.3 bits (64), Expect = 6.0 Identities = 13/52 (25%), Positives = 26/52 (50%) Frame = -3 Query: 159 VLSFIKPCPVASFV*CSTLKFFKSYYYLEQELVMLFVSVYSNMLMLCHALIY 4 ++SF+ + SF C T FF ++ + + + L Y + +C+ L+Y Sbjct: 81 LMSFVSRKNIISFTGCMTQLFFFCFFVVSESFI-LSAMAYDRYVAICNPLLY 131
>CHRD_HUMAN (Q9H2X0) Chordin precursor| Length = 955 Score = 28.9 bits (63), Expect = 7.8 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +2 Query: 401 CAVQQPWWGMRSPGTVRQPWKHQKQTCPS 487 CA + P WG R+ G R K+ K CP+ Sbjct: 80 CACEAPQWGRRTRGPGRVSCKNIKPECPT 108
>AKA12_HUMAN (Q02952) A-kinase anchor protein 12 (A-kinase anchor protein 250| kDa) (AKAP 250) (Myasthenia gravis autoantigen gravin) Length = 1781 Score = 28.9 bits (63), Expect = 7.8 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +2 Query: 332 QHGHTSSLSPKRPQEHSCMH*GTCAVQQ 415 Q G +S+ SP+ P+E +C+ G VQQ Sbjct: 560 QKGESSASSPEEPEEITCLEKGLAEVQQ 587 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,312,803 Number of Sequences: 219361 Number of extensions: 918362 Number of successful extensions: 2551 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 2475 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2551 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3478785780 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)