Clone Name | rbart08g09 |
---|---|
Clone Library Name | barley_pub |
>emb|AJ310426.1|HVU310426 Hordeum vulgare mRNA for cathepsin B (cathB gene) Length = 1277 Score = 942 bits (475), Expect = 0.0 Identities = 475/475 (100%) Strand = Plus / Minus Query: 9 ctgcttcattgttattaacgggcacatccatagctagtgcacagaatacatagtcctgga 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1249 ctgcttcattgttattaacgggcacatccatagctagtgcacagaatacatagtcctgga 1190 Query: 69 accatcaatgctagtttgcccgcttaatttgacaggcaaatagctaattccagctgcatc 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1189 accatcaatgctagtttgcccgcttaatttgacaggcaaatagctaattccagctgcatc 1130 Query: 129 agaggacgaggcgctgctcaaacttcacattgcaaaggcgctaccggcgatgttcttcat 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1129 agaggacgaggcgctgctcaaacttcacattgcaaaggcgctaccggcgatgttcttcat 1070 Query: 189 cgagggcataccggctgtaacatcttcttcgatgccacattcattcttgccccttatgat 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1069 cgagggcataccggctgtaacatcttcttcgatgccacattcattcttgccccttatgat 1010 Query: 249 cttgaagtatccgtcatcaccccagcctctgttccactgatttgcaagaagccagtaatc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1009 cttgaagtatccgtcatcaccccagcctctgttccactgatttgcaagaagccagtaatc 950 Query: 309 ctcgccagcatcactggttccccaaccaatcaacttgacggcatgacctcccatgacgcc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 949 ctcgccagcatcactggttccccaaccaatcaacttgacggcatgacctcccatgacgcc 890 Query: 369 acctgtgatgtgcttgtacactcctgacttgtagtgtgcgaagtcctcataaactgtgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 889 acctgtgatgtgcttgtacactcctgacttgtagtgtgcgaagtcctcataaactgtgaa 830 Query: 429 agcaacttctacagggccattcttgtagacctctgccatgatgtcatgtggatca 483 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 829 agcaacttctacagggccattcttgtagacctctgccatgatgtcatgtggatca 775
>emb|X66012.1|TACATHBA T.aestivum mRNA 1 for cathepsin B (2529) Length = 1065 Score = 672 bits (339), Expect = 0.0 Identities = 433/463 (93%), Gaps = 1/463 (0%) Strand = Plus / Minus Query: 22 attaacgggcacatccatagctagtgcacagaatacatagtcctggaaccatcaatgcta 81 |||||||| ||||| ||||||||||||||||||||| | |||||| ||||||||||||| Sbjct: 1050 attaacggacacattaatagctagtgcacagaatacagattcctggtaccatcaatgcta 991 Query: 82 gtttgcccgcttaat-ttgacaggcaaatagctaattccagctgcatcagaggacgaggc 140 | ||||||||||| |||| ||||||||||||||||||| | ||||||||||| ||| Sbjct: 990 atctgcccgcttaaacttgaaaggcaaatagctaattccaacagcatcagaggagaaggg 931 Query: 141 gctgctcaaacttcacattgcaaaggcgctaccggcgatgttcttcatcgagggcatacc 200 || |||||||||| | ||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 930 gcagctcaaactttaaattgcgaaggcgctaccggcgatgttctttgtcgagggcatacc 871 Query: 201 ggctgtaacatcttcttcgatgccacattcattcttgccccttatgatcttgaagtatcc 260 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 870 ggcagtaacatcttcttcgatgccacattcattcttgccccttatgatcttgaagtaccc 811 Query: 261 gtcatcaccccagcctctgttccactgatttgcaagaagccagtaatcctcgccagcatc 320 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 810 gtcatcgccccagcctctgttccactgatttgcaagaagccagtaatcctcgccagcatc 751 Query: 321 actggttccccaaccaatcaacttgacggcatgacctcccatgacgccacctgtgatgtg 380 ||| |||||||||||||||||||||||||| |||||||||||||| ||||| |||||||| Sbjct: 750 actagttccccaaccaatcaacttgacggcgtgacctcccatgactccaccggtgatgtg 691 Query: 381 cttgtacactcctgacttgtagtgtgcgaagtcctcataaactgtgaaagcaacttctac 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 690 cttgtacactcctgacttgtagtgtgcgaagtcctcataaactgtgaaagcaacttctac 631 Query: 441 agggccattcttgtagacctctgccatgatgtcatgtggatca 483 ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 630 agggccattattgtagacctctgccatgatgtcatgtggatca 588
>dbj|AK101093.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024N03, full insert sequence Length = 1437 Score = 377 bits (190), Expect = e-101 Identities = 277/306 (90%) Strand = Plus / Minus Query: 178 atgttcttcatcgagggcataccggctgtaacatcttcttcgatgccacattcattcttg 237 ||||||||| ||||||||||||| || |||||||||||||||||||||||| || || Sbjct: 1220 atgttcttcgtcgagggcataccagcaacaacatcttcttcgatgccacattcgtttgtg 1161 Query: 238 ccccttatgatcttgaagtatccgtcatcaccccagcctctgttccactgatttgcaaga 297 |||||||||||||||||||| || ||||| ||||| |||||||||||||| |||||||| Sbjct: 1160 ccccttatgatcttgaagtacccatcatcgccccatcctctgttccactggtttgcaagc 1101 Query: 298 agccagtaatcctcgccagcatcactggttccccaaccaatcaacttgacggcatgacct 357 ||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| Sbjct: 1100 agccagtaatcctcgccagcatccgtggttccccatccaatcaacttgacagcatgacca 1041 Query: 358 cccatgacgccacctgtgatgtgcttgtacactcctgacttgtagtgtgcgaagtcctca 417 ||||| | ||||||||||||||||||||| |||||||| ||||||||||| || |||||| Sbjct: 1040 cccatcatgccacctgtgatgtgcttgtatactcctgatttgtagtgtgcaaaatcctca 981 Query: 418 taaactgtgaaagcaacttctacagggccattcttgtagacctctgccatgatgtcatgt 477 ||||| |||||||||||||||||||||||||| | ||||||||||||||| ||||||||| Sbjct: 980 taaacggtgaaagcaacttctacagggccattttggtagacctctgccattatgtcatgt 921 Query: 478 ggatca 483 |||||| Sbjct: 920 ggatca 915
>dbj|AK100225.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047M19, full insert sequence Length = 1436 Score = 377 bits (190), Expect = e-101 Identities = 277/306 (90%) Strand = Plus / Minus Query: 178 atgttcttcatcgagggcataccggctgtaacatcttcttcgatgccacattcattcttg 237 ||||||||| ||||||||||||| || |||||||||||||||||||||||| || || Sbjct: 1218 atgttcttcgtcgagggcataccagcaacaacatcttcttcgatgccacattcgtttgtg 1159 Query: 238 ccccttatgatcttgaagtatccgtcatcaccccagcctctgttccactgatttgcaaga 297 |||||||||||||||||||| || ||||| ||||| |||||||||||||| |||||||| Sbjct: 1158 ccccttatgatcttgaagtacccatcatcgccccatcctctgttccactggtttgcaagc 1099 Query: 298 agccagtaatcctcgccagcatcactggttccccaaccaatcaacttgacggcatgacct 357 ||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| Sbjct: 1098 agccagtaatcctcgccagcatccgtggttccccatccaatcaacttgacagcatgacca 1039 Query: 358 cccatgacgccacctgtgatgtgcttgtacactcctgacttgtagtgtgcgaagtcctca 417 ||||| | ||||||||||||||||||||| |||||||| ||||||||||| || |||||| Sbjct: 1038 cccatcatgccacctgtgatgtgcttgtatactcctgatttgtagtgtgcaaaatcctca 979 Query: 418 taaactgtgaaagcaacttctacagggccattcttgtagacctctgccatgatgtcatgt 477 ||||| |||||||||||||||||||||||||| | ||||||||||||||| ||||||||| Sbjct: 978 taaacggtgaaagcaacttctacagggccattttggtagacctctgccattatgtcatgt 919 Query: 478 ggatca 483 |||||| Sbjct: 918 ggatca 913
>dbj|AK068459.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151C17, full insert sequence Length = 3464 Score = 377 bits (190), Expect = e-101 Identities = 277/306 (90%) Strand = Plus / Minus Query: 178 atgttcttcatcgagggcataccggctgtaacatcttcttcgatgccacattcattcttg 237 ||||||||| ||||||||||||| || |||||||||||||||||||||||| || || Sbjct: 1349 atgttcttcgtcgagggcataccagcaacaacatcttcttcgatgccacattcgtttgtg 1290 Query: 238 ccccttatgatcttgaagtatccgtcatcaccccagcctctgttccactgatttgcaaga 297 |||||||||||||||||||| || ||||| ||||| |||||||||||||| |||||||| Sbjct: 1289 ccccttatgatcttgaagtacccatcatcgccccatcctctgttccactggtttgcaagc 1230 Query: 298 agccagtaatcctcgccagcatcactggttccccaaccaatcaacttgacggcatgacct 357 ||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| Sbjct: 1229 agccagtaatcctcgccagcatccgtggttccccatccaatcaacttgacagcatgacca 1170 Query: 358 cccatgacgccacctgtgatgtgcttgtacactcctgacttgtagtgtgcgaagtcctca 417 ||||| | ||||||||||||||||||||| |||||||| ||||||||||| || |||||| Sbjct: 1169 cccatcatgccacctgtgatgtgcttgtatactcctgatttgtagtgtgcaaaatcctca 1110 Query: 418 taaactgtgaaagcaacttctacagggccattcttgtagacctctgccatgatgtcatgt 477 ||||| |||||||||||||||||||||||||| | ||||||||||||||| ||||||||| Sbjct: 1109 taaacggtgaaagcaacttctacagggccattttggtagacctctgccattatgtcatgt 1050 Query: 478 ggatca 483 |||||| Sbjct: 1049 ggatca 1044
>dbj|AK064820.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E23, full insert sequence Length = 1369 Score = 377 bits (190), Expect = e-101 Identities = 277/306 (90%) Strand = Plus / Minus Query: 178 atgttcttcatcgagggcataccggctgtaacatcttcttcgatgccacattcattcttg 237 ||||||||| ||||||||||||| || |||||||||||||||||||||||| || || Sbjct: 1151 atgttcttcgtcgagggcataccagcaacaacatcttcttcgatgccacattcgtttgtg 1092 Query: 238 ccccttatgatcttgaagtatccgtcatcaccccagcctctgttccactgatttgcaaga 297 |||||||||||||||||||| || ||||| ||||| |||||||||||||| |||||||| Sbjct: 1091 ccccttatgatcttgaagtacccatcatcgccccatcctctgttccactggtttgcaagc 1032 Query: 298 agccagtaatcctcgccagcatcactggttccccaaccaatcaacttgacggcatgacct 357 ||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| Sbjct: 1031 agccagtaatcctcgccagcatccgtggttccccatccaatcaacttgacagcatgacca 972 Query: 358 cccatgacgccacctgtgatgtgcttgtacactcctgacttgtagtgtgcgaagtcctca 417 ||||| | ||||||||||||||||||||| |||||||| ||||||||||| || |||||| Sbjct: 971 cccatcatgccacctgtgatgtgcttgtatactcctgatttgtagtgtgcaaaatcctca 912 Query: 418 taaactgtgaaagcaacttctacagggccattcttgtagacctctgccatgatgtcatgt 477 ||||| |||||||||||||||||||||||||| | ||||||||||||||| ||||||||| Sbjct: 911 taaacggtgaaagcaacttctacagggccattttggtagacctctgccattatgtcatgt 852 Query: 478 ggatca 483 |||||| Sbjct: 851 ggatca 846
>dbj|AK059697.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-C04, full insert sequence Length = 1565 Score = 377 bits (190), Expect = e-101 Identities = 277/306 (90%) Strand = Plus / Minus Query: 178 atgttcttcatcgagggcataccggctgtaacatcttcttcgatgccacattcattcttg 237 ||||||||| ||||||||||||| || |||||||||||||||||||||||| || || Sbjct: 1150 atgttcttcgtcgagggcataccagcaacaacatcttcttcgatgccacattcgtttgtg 1091 Query: 238 ccccttatgatcttgaagtatccgtcatcaccccagcctctgttccactgatttgcaaga 297 |||||||||||||||||||| || ||||| ||||| |||||||||||||| |||||||| Sbjct: 1090 ccccttatgatcttgaagtacccatcatcgccccatcctctgttccactggtttgcaagc 1031 Query: 298 agccagtaatcctcgccagcatcactggttccccaaccaatcaacttgacggcatgacct 357 ||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| Sbjct: 1030 agccagtaatcctcgccagcatccgtggttccccatccaatcaacttgacagcatgacca 971 Query: 358 cccatgacgccacctgtgatgtgcttgtacactcctgacttgtagtgtgcgaagtcctca 417 ||||| | ||||||||||||||||||||| |||||||| ||||||||||| || |||||| Sbjct: 970 cccatcatgccacctgtgatgtgcttgtatactcctgatttgtagtgtgcaaaatcctca 911 Query: 418 taaactgtgaaagcaacttctacagggccattcttgtagacctctgccatgatgtcatgt 477 ||||| |||||||||||||||||||||||||| | ||||||||||||||| ||||||||| Sbjct: 910 taaacggtgaaagcaacttctacagggccattttggtagacctctgccattatgtcatgt 851 Query: 478 ggatca 483 |||||| Sbjct: 850 ggatca 845
>gb|AY916493.1| Oryza sativa (japonica cultivar-group) cathepsin B-like cysteine protease mRNA, complete cds Length = 1475 Score = 377 bits (190), Expect = e-101 Identities = 277/306 (90%) Strand = Plus / Minus Query: 178 atgttcttcatcgagggcataccggctgtaacatcttcttcgatgccacattcattcttg 237 ||||||||| ||||||||||||| || |||||||||||||||||||||||| || || Sbjct: 1172 atgttcttcgtcgagggcataccagcaacaacatcttcttcgatgccacattcgtttgtg 1113 Query: 238 ccccttatgatcttgaagtatccgtcatcaccccagcctctgttccactgatttgcaaga 297 |||||||||||||||||||| || ||||| ||||| |||||||||||||| |||||||| Sbjct: 1112 ccccttatgatcttgaagtacccatcatcgccccatcctctgttccactggtttgcaagc 1053 Query: 298 agccagtaatcctcgccagcatcactggttccccaaccaatcaacttgacggcatgacct 357 ||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| Sbjct: 1052 agccagtaatcctcgccagcatccgtggttccccatccaatcaacttgacagcatgacca 993 Query: 358 cccatgacgccacctgtgatgtgcttgtacactcctgacttgtagtgtgcgaagtcctca 417 ||||| | ||||||||||||||||||||| |||||||| ||||||||||| || |||||| Sbjct: 992 cccatcatgccacctgtgatgtgcttgtatactcctgatttgtagtgtgcaaaatcctca 933 Query: 418 taaactgtgaaagcaacttctacagggccattcttgtagacctctgccatgatgtcatgt 477 ||||| |||||||||||||||||||||||||| | ||||||||||||||| ||||||||| Sbjct: 932 taaacggtgaaagcaacttctacagggccattttggtagacctctgccattatgtcatgt 873 Query: 478 ggatca 483 |||||| Sbjct: 872 ggatca 867
>gb|BT016464.1| Zea mays clone Contig297 mRNA sequence Length = 1136 Score = 361 bits (182), Expect = 1e-96 Identities = 245/266 (92%) Strand = Plus / Minus Query: 217 tcgatgccacattcattcttgccccttatgatcttgaagtatccgtcatcaccccagcct 276 ||||||||||||||||| |||||||||||||||||||||||||| || || ||||||||| Sbjct: 820 tcgatgccacattcatttttgccccttatgatcttgaagtatccatcgtcgccccagcct 761 Query: 277 ctgttccactgatttgcaagaagccagtaatcctcgccagcatcactggttccccaacca 336 || |||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 760 ctattccactgatttgccagaagccagtaatcctctccagcatcactggttccccatcca 701 Query: 337 atcaacttgacggcatgacctcccatgacgccacctgtgatgtgcttgtacactcctgac 396 ||||||||||||||||| || ||||| | |||||| |||||||||||||||||||| || Sbjct: 700 atcaacttgacggcatggccgcccataatgccaccggtgatgtgcttgtacactccagat 641 Query: 397 ttgtagtgtgcgaagtcctcataaactgtgaaagcaacttctacagggccattcttgtag 456 |||||||||||||| ||||| |||||||||||||||||||||||||| || || |||||| Sbjct: 640 ttgtagtgtgcgaaatcctcgtaaactgtgaaagcaacttctacaggaccgtttttgtag 581 Query: 457 acctctgccatgatgtcatgtggatc 482 ||||||||||| |||||||||||||| Sbjct: 580 acctctgccattatgtcatgtggatc 555
>gb|AY112465.1| Zea mays CL31697_1 mRNA sequence Length = 1472 Score = 325 bits (164), Expect = 8e-86 Identities = 238/266 (89%) Strand = Plus / Plus Query: 217 tcgatgccacattcattcttgccccttatgatcttgaagtatccgtcatcaccccagcct 276 ||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||| Sbjct: 269 tcgatgccacattcannnnngccccttatgatcttgaagtatccatcatcgccccagcct 328 Query: 277 ctgttccactgatttgcaagaagccagtaatcctcgccagcatcactggttccccaacca 336 || |||||||||||||| |||||||||||||| || |||||||||||||||||||| ||| Sbjct: 329 ctattccactgatttgccagaagccagtaatcttctccagcatcactggttccccatcca 388 Query: 337 atcaacttgacggcatgacctcccatgacgccacctgtgatgtgcttgtacactcctgac 396 ||||||||||||||||| || ||||| | |||||| |||||||||||||||||||| || Sbjct: 389 atcaacttgacggcatggccacccataatgccaccggtgatgtgcttgtacactccagat 448 Query: 397 ttgtagtgtgcgaagtcctcataaactgtgaaagcaacttctacagggccattcttgtag 456 |||||||||||||| ||||| |||||||||||||||||||||||||| ||| |||| Sbjct: 449 ttgtagtgtgcgaaatcctcgtaaactgtgaaagcaacttctacaggaccannnnngtag 508 Query: 457 acctctgccatgatgtcatgtggatc 482 ||||||||||| |||||||||||||| Sbjct: 509 acctctgccattatgtcatgtggatc 534
>emb|X66014.1|TACATHBB T.aestivum mRNA 2 for cathepsin B (2077) Length = 1216 Score = 260 bits (131), Expect = 4e-66 Identities = 143/147 (97%) Strand = Plus / Minus Query: 268 ccccagcctctgttccactgatttgcaagaagccagtaatcctcgccagcatcactggtt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1216 ccccagcctctgttccactgatttgcaagaagccagtaatcctcgccagcatcactggtt 1157 Query: 328 ccccaaccaatcaacttgacggcatgacctcccatgacgccacctgtgatgtgcttgtac 387 |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1156 ccccaaccgatcaacttgacggcatgacctcccatcacgccacctgtgatgtgcttgtat 1097 Query: 388 actcctgacttgtagtgtgcgaagtcc 414 |||||||| |||||||||||||||||| Sbjct: 1096 actcctgatttgtagtgtgcgaagtcc 1070 Score = 111 bits (56), Expect = 2e-21 Identities = 65/68 (95%) Strand = Plus / Minus Query: 414 ctcataaactgtgaaagcaacttctacagggccattcttgtagacctctgccatgatgtc 473 ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 832 ctcataaacggtgaaagcaacttctacagggccatttttgtagacctctgccatgatgtc 773 Query: 474 atgtggat 481 ||| |||| Sbjct: 772 atggggat 765
>emb|X66013.1|TACATHBG T.aestivum gene for cathepsin B (Al16) Length = 4792 Score = 196 bits (99), Expect = 5e-47 Identities = 111/115 (96%) Strand = Plus / Minus Query: 300 ccagtaatcctcgccagcatcactggttccccaaccaatcaacttgacggcatgacctcc 359 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 4031 ccagtaatcctcgccagcatcactggttccccaaccgatcaacttgacggcatgacctcc 3972 Query: 360 catgacgccacctgtgatgtgcttgtacactcctgacttgtagtgtgcgaagtcc 414 ||| ||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 3971 catcacgccacctgtgatgtgcttgtatactcctgatttgtagtgtgcgaagtcc 3917 Score = 121 bits (61), Expect = 2e-24 Identities = 79/85 (92%) Strand = Plus / Minus Query: 179 tgttcttcatcgagggcataccggctgtaacatcttcttcgatgccacattcattcttgc 238 ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||| || Sbjct: 4324 tgttctttgtcgagggcataccggcagtaacatcgccttcgatgccacattcattctcgc 4265 Query: 239 cccttatgatcttgaagtatccgtc 263 ||||||||||||||||||||||||| Sbjct: 4264 cccttatgatcttgaagtatccgtc 4240 Score = 113 bits (57), Expect = 5e-22 Identities = 66/69 (95%) Strand = Plus / Minus Query: 413 cctcataaactgtgaaagcaacttctacagggccattcttgtagacctctgccatgatgt 472 |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 3615 cctcataaacggtgaaagcaacttctacagggccatttttgtagacctctgccatgatgt 3556 Query: 473 catgtggat 481 |||| |||| Sbjct: 3555 catggggat 3547 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 263 catcaccccagcctctgttccactgatttgcaagaagc 300 |||||||||||||||||||||||||||||||||||||| Sbjct: 4151 catcaccccagcctctgttccactgatttgcaagaagc 4114
>gb|AC132490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0570A02, complete sequence Length = 146541 Score = 143 bits (72), Expect = 6e-31 Identities = 99/108 (91%) Strand = Plus / Minus Query: 300 ccagtaatcctcgccagcatcactggttccccaaccaatcaacttgacggcatgacctcc 359 ||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| || Sbjct: 111483 ccagtaatcctcgccagcatccgtggttccccatccaatcaacttgacagcatgaccacc 111424 Query: 360 catgacgccacctgtgatgtgcttgtacactcctgacttgtagtgtgc 407 ||| | ||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 111423 catcatgccacctgtgatgtgcttgtatactcctgatttgtagtgtgc 111376 Score = 109 bits (55), Expect = 8e-21 Identities = 67/71 (94%) Strand = Plus / Minus Query: 413 cctcataaactgtgaaagcaacttctacagggccattcttgtagacctctgccatgatgt 472 |||||||||| |||||||||||||||||||||||||| | ||||||||||||||| |||| Sbjct: 110900 cctcataaacggtgaaagcaacttctacagggccattttggtagacctctgccattatgt 110841 Query: 473 catgtggatca 483 ||||||||||| Sbjct: 110840 catgtggatca 110830 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 178 atgttcttcatcgagggcataccggctgtaacatcttcttcgatgccacattcattcttg 237 ||||||||| ||||||||||||| || |||||||||||||||||||||||| || || Sbjct: 111792 atgttcttcgtcgagggcataccagcaacaacatcttcttcgatgccacattcgtttgtg 111733 Query: 238 ccccttatgatcttgaagta 257 |||||||||||||||||||| Sbjct: 111732 ccccttatgatcttgaagta 111713 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 263 catcaccccagcctctgttccactgatttgcaag 296 |||| ||||| |||||||||||||| |||||||| Sbjct: 111611 catcgccccatcctctgttccactggtttgcaag 111578
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 143 bits (72), Expect = 6e-31 Identities = 99/108 (91%) Strand = Plus / Minus Query: 300 ccagtaatcctcgccagcatcactggttccccaaccaatcaacttgacggcatgacctcc 359 ||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| || Sbjct: 14031406 ccagtaatcctcgccagcatccgtggttccccatccaatcaacttgacagcatgaccacc 14031347 Query: 360 catgacgccacctgtgatgtgcttgtacactcctgacttgtagtgtgc 407 ||| | ||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 14031346 catcatgccacctgtgatgtgcttgtatactcctgatttgtagtgtgc 14031299 Score = 109 bits (55), Expect = 8e-21 Identities = 67/71 (94%) Strand = Plus / Minus Query: 413 cctcataaactgtgaaagcaacttctacagggccattcttgtagacctctgccatgatgt 472 |||||||||| |||||||||||||||||||||||||| | ||||||||||||||| |||| Sbjct: 14030823 cctcataaacggtgaaagcaacttctacagggccattttggtagacctctgccattatgt 14030764 Query: 473 catgtggatca 483 ||||||||||| Sbjct: 14030763 catgtggatca 14030753 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 178 atgttcttcatcgagggcataccggctgtaacatcttcttcgatgccacattcattcttg 237 ||||||||| ||||||||||||| || |||||||||||||||||||||||| || || Sbjct: 14031715 atgttcttcgtcgagggcataccagcaacaacatcttcttcgatgccacattcgtttgtg 14031656 Query: 238 ccccttatgatcttgaagta 257 |||||||||||||||||||| Sbjct: 14031655 ccccttatgatcttgaagta 14031636 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 263 catcaccccagcctctgttccactgatttgcaag 296 |||| ||||| |||||||||||||| |||||||| Sbjct: 14031534 catcgccccatcctctgttccactggtttgcaag 14031501
>gb|AY662990.1| Petunia x hybrida cysteine proteinase (CP4) mRNA, partial cds Length = 630 Score = 137 bits (69), Expect = 4e-29 Identities = 210/257 (81%) Strand = Plus / Minus Query: 214 tcttcgatgccacattcattcttgccccttatgatcttgaagtatccgtcatcaccccag 273 ||||| ||| ||||||| ||| | || ||| ||||||| ||||| || |||||||||||| Sbjct: 284 tcttctatgtcacattcgttcgttcctcttctgatcttaaagtacccatcatcaccccag 225 Query: 274 cctctgttccactgatttgcaagaagccagtaatcctcgccagcatcactggttccccaa 333 ||||||||||||||||| ||||||||||| || ||||| ||| | ||| ||||||||| Sbjct: 224 cctctgttccactgattggcaagaagccaatagtcctctccatcctcagaggttccccat 165 Query: 334 ccaatcaacttgacggcatgacctcccatgacgccacctgtgatgtgcttgtacactcct 393 ||||| | ||| || ||||| ||||||| | |||| || | |||||||| ||||| Sbjct: 164 ccaatgagcttaacagcatggcctcccaattcatcaccagttacatgcttgtaaactcca 105 Query: 394 gacttgtagtgtgcgaagtcctcataaactgtgaaagcaacttctacagggccattcttg 453 ||||||||||| ||||| ||||||||||| || ||||| || || || || ||||||||| Sbjct: 104 gacttgtagtgagcgaaatcctcataaacagtaaaagcgacctcaactggtccattcttg 45 Query: 454 tagacctctgccatgat 470 || || |||| |||||| Sbjct: 44 taaacttctgtcatgat 28
>ref|NM_100110.2| Arabidopsis thaliana cysteine-type endopeptidase/ cysteine-type peptidase AT1G02300 mRNA, complete cds Length = 1227 Score = 123 bits (62), Expect = 6e-25 Identities = 206/254 (81%) Strand = Plus / Minus Query: 220 atgccacattcattcttgccccttatgatcttgaagtatccgtcatcaccccagcctctg 279 ||||||||||| ||| | || || ||||||||||||| || ||||||||||||| || | Sbjct: 1049 atgccacattcgttcgttcctctcctgatcttgaagtaaccatcatcaccccagcttcgg 990 Query: 280 ttccactgatttgcaagaagccagtaatcctcgccagcatcactggttccccaaccaatc 339 ||||| ||||||||||| | ||| ||||| ||||| ||||| |||||||| ||||| Sbjct: 989 ttccattgatttgcaagcaaccaataatcttcgccgtcatcagaagttccccagccaatg 930 Query: 340 aacttgacggcatgacctcccatgacgccacctgtgatgtgcttgtacactcctgacttg 399 | ||| || ||||||||||| || ||| || |||| |||||| |||||||| ||| Sbjct: 929 agcttaactgcatgacctccaatcttagtacccgttatgtacttgtatactcctgatttg 870 Query: 400 tagtgtgcgaagtcctcataaactgtgaaagcaacttctacagggccattcttgtagacc 459 || ||||| |||||||| ||||| || |||||||| || ||||| ||||||||||| ||| Sbjct: 869 taatgtgcaaagtcctcgtaaacggtaaaagcaacctcgacaggtccattcttgtaaacc 810 Query: 460 tctgccatgatgtc 473 || ||||| ||||| Sbjct: 809 tcagccataatgtc 796
>dbj|AK221536.1| Arabidopsis thaliana mRNA for cathepsin B-like cysteine proteinase like protein, complete cds, clone: RAFL07-69-N22 Length = 1520 Score = 123 bits (62), Expect = 6e-25 Identities = 206/254 (81%) Strand = Plus / Minus Query: 220 atgccacattcattcttgccccttatgatcttgaagtatccgtcatcaccccagcctctg 279 ||||||||||| ||| | || || ||||||||||||| || ||||||||||||| || | Sbjct: 1285 atgccacattcgttcgttcctctcctgatcttgaagtaaccatcatcaccccagcttcgg 1226 Query: 280 ttccactgatttgcaagaagccagtaatcctcgccagcatcactggttccccaaccaatc 339 ||||| ||||||||||| | ||| ||||| ||||| ||||| |||||||| ||||| Sbjct: 1225 ttccattgatttgcaagcaaccaataatcttcgccgtcatcagaagttccccagccaatg 1166 Query: 340 aacttgacggcatgacctcccatgacgccacctgtgatgtgcttgtacactcctgacttg 399 | ||| || ||||||||||| || ||| || |||| |||||| |||||||| ||| Sbjct: 1165 agcttaactgcatgacctccaatcttagtacccgttatgtacttgtatactcctgatttg 1106 Query: 400 tagtgtgcgaagtcctcataaactgtgaaagcaacttctacagggccattcttgtagacc 459 || ||||| |||||||| ||||| || |||||||| || ||||| ||||||||||| ||| Sbjct: 1105 taatgtgcaaagtcctcgtaaacggtaaaagcaacctcgacaggtccattcttgtaaacc 1046 Query: 460 tctgccatgatgtc 473 || ||||| ||||| Sbjct: 1045 tcagccataatgtc 1032
>ref|NM_100111.1| Arabidopsis thaliana cysteine-type endopeptidase/ cysteine-type peptidase AT1G02305 mRNA, complete cds Length = 1277 Score = 117 bits (59), Expect = 3e-23 Identities = 188/231 (81%) Strand = Plus / Minus Query: 245 tgatcttgaagtatccgtcatcaccccagcctctgttccactgatttgcaagaagccagt 304 ||||||||||||| || ||||||||||||| || |||||| ||||||||||| | ||| | Sbjct: 1011 tgatcttgaagtacccatcatcaccccagcttcggttccattgatttgcaagcaaccaat 952 Query: 305 aatcctcgccagcatcactggttccccaaccaatcaacttgacggcatgacctcccatga 364 |||| || || ||||| |||||||| ||||| | || || ||||||||||| ||| Sbjct: 951 aatcttcaccgtcatcagaagttccccagccaataagtttaacagcatgacctccaatgt 892 Query: 365 cgccacctgtgatgtgcttgtacactcctgacttgtagtgtgcgaagtcctcataaactg 424 |||||| ||||||||||||||||| || ||||| || || |||||||| ||||| | Sbjct: 891 tagtacctgttatgtgcttgtacactccagatttgtaatgcgcaaagtcctcgtaaacag 832 Query: 425 tgaaagcaacttctacagggccattcttgtagacctctgccatgatgtcat 475 |||| ||||| || ||||| ||||| ||||| || |||||||| ||||||| Sbjct: 831 tgaaggcaacctcaacaggtccatttttgtaaacttctgccataatgtcat 781
>gb|AF428337.1|AF428337 Arabidopsis thaliana At1g02300/T6A9_10 mRNA, complete cds Length = 1277 Score = 117 bits (59), Expect = 3e-23 Identities = 188/231 (81%) Strand = Plus / Minus Query: 245 tgatcttgaagtatccgtcatcaccccagcctctgttccactgatttgcaagaagccagt 304 ||||||||||||| || ||||||||||||| || |||||| ||||||||||| | ||| | Sbjct: 1079 tgatcttgaagtacccatcatcaccccagcttcggttccattgatttgcaagcaaccaat 1020 Query: 305 aatcctcgccagcatcactggttccccaaccaatcaacttgacggcatgacctcccatga 364 |||| || || ||||| |||||||| ||||| | || || ||||||||||| ||| Sbjct: 1019 aatcttcaccgtcatcagaagttccccagccaataagtttaacagcatgacctccaatgt 960 Query: 365 cgccacctgtgatgtgcttgtacactcctgacttgtagtgtgcgaagtcctcataaactg 424 |||||| ||||||||||||||||| || ||||| || || |||||||| ||||| | Sbjct: 959 tagtacctgttatgtgcttgtacactccagatttgtaatgcgcaaagtcctcgtaaacag 900 Query: 425 tgaaagcaacttctacagggccattcttgtagacctctgccatgatgtcat 475 |||| ||||| || ||||| ||||| ||||| || |||||||| ||||||| Sbjct: 899 tgaaggcaacctcaacaggtccatttttgtaaacttctgccataatgtcat 849
>gb|AY039887.1| Arabidopsis thaliana At1g02300/T6A9_10 mRNA, complete cds Length = 1277 Score = 117 bits (59), Expect = 3e-23 Identities = 188/231 (81%) Strand = Plus / Minus Query: 245 tgatcttgaagtatccgtcatcaccccagcctctgttccactgatttgcaagaagccagt 304 ||||||||||||| || ||||||||||||| || |||||| ||||||||||| | ||| | Sbjct: 1011 tgatcttgaagtacccatcatcaccccagcttcggttccattgatttgcaagcaaccaat 952 Query: 305 aatcctcgccagcatcactggttccccaaccaatcaacttgacggcatgacctcccatga 364 |||| || || ||||| |||||||| ||||| | || || ||||||||||| ||| Sbjct: 951 aatcttcaccgtcatcagaagttccccagccaataagtttaacagcatgacctccaatgt 892 Query: 365 cgccacctgtgatgtgcttgtacactcctgacttgtagtgtgcgaagtcctcataaactg 424 |||||| ||||||||||||||||| || ||||| || || |||||||| ||||| | Sbjct: 891 tagtacctgttatgtgcttgtacactccagatttgtaatgcgcaaagtcctcgtaaacag 832 Query: 425 tgaaagcaacttctacagggccattcttgtagacctctgccatgatgtcat 475 |||| ||||| || ||||| ||||| ||||| || |||||||| ||||||| Sbjct: 831 tgaaggcaacctcaacaggtccatttttgtaaacttctgccataatgtcat 781
>gb|BT002227.1| Arabidopsis thaliana At1g02300/T6A9_10 mRNA, complete cds Length = 1089 Score = 117 bits (59), Expect = 3e-23 Identities = 188/231 (81%) Strand = Plus / Minus Query: 245 tgatcttgaagtatccgtcatcaccccagcctctgttccactgatttgcaagaagccagt 304 ||||||||||||| || ||||||||||||| || |||||| ||||||||||| | ||| | Sbjct: 973 tgatcttgaagtacccatcatcaccccagcttcggttccattgatttgcaagcaaccaat 914 Query: 305 aatcctcgccagcatcactggttccccaaccaatcaacttgacggcatgacctcccatga 364 |||| || || ||||| |||||||| ||||| | || || ||||||||||| ||| Sbjct: 913 aatcttcaccgtcatcagaagttccccagccaataagtttaacagcatgacctccaatgt 854 Query: 365 cgccacctgtgatgtgcttgtacactcctgacttgtagtgtgcgaagtcctcataaactg 424 |||||| ||||||||||||||||| || ||||| || || |||||||| ||||| | Sbjct: 853 tagtacctgttatgtgcttgtacactccagatttgtaatgcgcaaagtcctcgtaaacag 794 Query: 425 tgaaagcaacttctacagggccattcttgtagacctctgccatgatgtcat 475 |||| ||||| || ||||| ||||| ||||| || |||||||| ||||||| Sbjct: 793 tgaaggcaacctcaacaggtccatttttgtaaacttctgccataatgtcat 743
>emb|AJ251536.1|PSA251536 Pisum sativum partial mRNA for putative cathepsin B-like protease (cat1 gene) clone PsCat1 Length = 705 Score = 109 bits (55), Expect = 8e-21 Identities = 217/271 (80%) Strand = Plus / Minus Query: 200 cggctgtaacatcttcttcgatgccacattcattcttgccccttatgatcttgaagtatc 259 ||||||||||||| ||||| || ||||||||||| | || || ||||||||||||| | Sbjct: 499 cggctgtaacatcctcttcaatcccacattcatttgtccctctcttgatcttgaagtaac 440 Query: 260 cgtcatcaccccagcctctgttccactgatttgcaagaagccagtaatcctcgccagcat 319 | ||||| ||||| | | ||||||||||||||||||||||| || ||||| || ||| Sbjct: 439 catcatctccccaatttgtattccactgatttgcaagaagccaatagtcctccccttcat 380 Query: 320 cactggttccccaaccaatcaacttgacggcatgacctcccatgacgccacctgtgatgt 379 |||| |||||||| ||| ||| ||| || || ||||| || | | ||||||||||| Sbjct: 379 cacttgttccccacccattcagctttactgcgtgaccgcctagtgcagaacctgtgatgt 320 Query: 380 gcttgtacactcctgacttgtagtgtgcgaagtcctcataaactgtgaaagcaacttcta 439 | ||||| |||||||| |||||||| || || ||||||||||| |||| |||||||| | Sbjct: 319 gtttgtaaactcctgatttgtagtgagcaaaatcctcataaacactgaatgcaacttcaa 260 Query: 440 cagggccattcttgtagacctctgccatgat 470 | || || ||||| || || ||| ||||||| Sbjct: 259 ccggcccgttcttataaacttcttccatgat 229
>emb|X81995.1|NRCATHB N.rustica mRNA for cathepsin B-like cysteine proteinase Length = 1331 Score = 99.6 bits (50), Expect = 8e-18 Identities = 182/226 (80%) Strand = Plus / Minus Query: 245 tgatcttgaagtatccgtcatcaccccagcctctgttccactgatttgcaagaagccagt 304 ||||||| ||||| || ||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 970 tgatcttaaagtaaccatcatcaccccagcctctgttccactgattggcaagaagccaat 911 Query: 305 aatcctcgccagcatcactggttccccaaccaatcaacttgacggcatgacctcccatga 364 | ||||| ||| | || ||||||||| || || | || || ||||| |||||||| | Sbjct: 910 agtcctctccatcctcggaggttccccatccgatgagtttaacagcatggcctcccatta 851 Query: 365 cgccacctgtgatgtgcttgtacactcctgacttgtagtgtgcgaagtcctcataaactg 424 |||| || | |||||||| ||||| ||||||||||| ||||| ||||| ||||| | Sbjct: 850 tatcaccagttacatgcttgtaaactccagacttgtagtgagcgaaatcctcgtaaacag 791 Query: 425 tgaaagcaacttctacagggccattcttgtagacctctgccatgat 470 | |||| || || || || ||||||||||| || |||| |||||| Sbjct: 790 taaaagagacctcaactggtccattcttgtacacttctgtcatgat 745
>emb|BX815386.1|CNS0AAL6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZE10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1305 Score = 95.6 bits (48), Expect = 1e-16 Identities = 187/232 (80%), Gaps = 1/232 (0%) Strand = Plus / Minus Query: 245 tgatcttgaagtatccgtcatcaccccagcctctgttccactgatttgcaagaagccagt 304 ||||||||||||| || ||||||||||||| || |||||| ||||||||||| | ||| | Sbjct: 1034 tgatcttgaagtacccatcatcaccccagcttcggttccattgatttgcaagcaaccaat 975 Query: 305 aatcctcgccagcatcactggttccccaaccaatcaacttgacggcatgacctcccatga 364 |||| || || ||||| |||||||| ||| | | || || ||||||||||| ||| Sbjct: 974 aatcttcaccgtcatcagaagttccccagccagtaagtttaacagcatgacctccaatgt 915 Query: 365 cgccacctgtgatgtgc-ttgtacactcctgacttgtagtgtgcgaagtcctcataaact 423 |||||| |||||| ||||||||||| || ||||| || || |||||||| ||||| Sbjct: 914 tagtacctgttatgtgcattgtacactccagatttgtaatgcgcaaagtcctcgtaaaca 855 Query: 424 gtgaaagcaacttctacagggccattcttgtagacctctgccatgatgtcat 475 ||||| ||||| || ||||| ||||| ||||| || |||||||| ||||||| Sbjct: 854 gtgaaggcaacctcaacaggtccatttttgtaaacttctgccataatgtcat 803
>gb|AY086034.1| Arabidopsis thaliana clone 20761 mRNA, complete sequence Length = 1429 Score = 95.6 bits (48), Expect = 1e-16 Identities = 177/220 (80%) Strand = Plus / Minus Query: 262 tcatcaccccagcctctgttccactgatttgcaagaagccagtaatcctcgccagcatca 321 ||||||||||||||||||||||| |||||||| | | ||| ||||| || || || Sbjct: 1109 tcatcaccccagcctctgttccattgatttgccatcaaccaataatcttctccttcactg 1050 Query: 322 ctggttccccaaccaatcaacttgacggcatgacctcccatgacgccacctgtgatgtgc 381 ||||||||||||||||| | || || ||||||||||| ||| |||||| |||||| Sbjct: 1049 ctggttccccaaccaataagtttaacagcatgacctccaatgttagaacctgttatgtgc 990 Query: 382 ttgtacactcctgacttgtagtgtgcgaagtcctcataaactgtgaaagcaacttctaca 441 || || ||||| || ||||| || || || ||||||||||| || |||| ||||| ||| Sbjct: 989 ttatagactccagatttgtaatgagcaaaatcctcataaacggtaaaagagacttcaaca 930 Query: 442 gggccattcttgtagacctctgccatgatgtcatgtggat 481 || |||||||| || |||||||||||||| || ||||||| Sbjct: 929 ggtccattcttataaacctctgccatgatatcttgtggat 890
>ref|NM_116392.2| Arabidopsis thaliana cysteine-type endopeptidase/ cysteine-type peptidase AT4G01610 transcript variant AT4G01610.1 mRNA, complete cds Length = 1431 Score = 87.7 bits (44), Expect = 3e-14 Identities = 176/220 (80%) Strand = Plus / Minus Query: 262 tcatcaccccagcctctgttccactgatttgcaagaagccagtaatcctcgccagcatca 321 ||||||||||||||||||||||| |||||||| | | ||| ||||| || || || Sbjct: 1109 tcatcaccccagcctctgttccattgatttgccatcaaccaataatcttctccttcactg 1050 Query: 322 ctggttccccaaccaatcaacttgacggcatgacctcccatgacgccacctgtgatgtgc 381 || |||||||||||||| | || || ||||||||||| ||| |||||| |||||| Sbjct: 1049 ctagttccccaaccaataagtttaacagcatgacctccaatgttagaacctgttatgtgc 990 Query: 382 ttgtacactcctgacttgtagtgtgcgaagtcctcataaactgtgaaagcaacttctaca 441 || || ||||| || ||||| || || || ||||||||||| || |||| ||||| ||| Sbjct: 989 ttatagactccagatttgtaatgagcaaaatcctcataaacggtaaaagagacttcaaca 930 Query: 442 gggccattcttgtagacctctgccatgatgtcatgtggat 481 || |||||||| || |||||||||||||| || ||||||| Sbjct: 929 ggtccattcttataaacctctgccatgatatcttgtggat 890
>ref|NM_178950.1| Arabidopsis thaliana cysteine-type endopeptidase/ cysteine-type peptidase AT4G01610 transcript variant AT4G01610.2 mRNA, complete cds Length = 1431 Score = 87.7 bits (44), Expect = 3e-14 Identities = 176/220 (80%) Strand = Plus / Minus Query: 262 tcatcaccccagcctctgttccactgatttgcaagaagccagtaatcctcgccagcatca 321 ||||||||||||||||||||||| |||||||| | | ||| ||||| || || || Sbjct: 1109 tcatcaccccagcctctgttccattgatttgccatcaaccaataatcttctccttcactg 1050 Query: 322 ctggttccccaaccaatcaacttgacggcatgacctcccatgacgccacctgtgatgtgc 381 || |||||||||||||| | || || ||||||||||| ||| |||||| |||||| Sbjct: 1049 ctagttccccaaccaataagtttaacagcatgacctccaatgttagaacctgttatgtgc 990 Query: 382 ttgtacactcctgacttgtagtgtgcgaagtcctcataaactgtgaaagcaacttctaca 441 || || ||||| || ||||| || || || ||||||||||| || |||| ||||| ||| Sbjct: 989 ttatagactccagatttgtaatgagcaaaatcctcataaacggtaaaagagacttcaaca 930 Query: 442 gggccattcttgtagacctctgccatgatgtcatgtggat 481 || |||||||| || |||||||||||||| || ||||||| Sbjct: 929 ggtccattcttataaacctctgccatgatatcttgtggat 890
>gb|AF083797.1| Arabidopsis thaliana clone sps897 unknown mRNA Length = 1318 Score = 87.7 bits (44), Expect = 3e-14 Identities = 176/220 (80%) Strand = Plus / Minus Query: 262 tcatcaccccagcctctgttccactgatttgcaagaagccagtaatcctcgccagcatca 321 ||||||||||||||||||||||| |||||||| | | ||| ||||| || || || Sbjct: 989 tcatcaccccagcctctgttccattgatttgccatcaaccaataatcttctccttcactg 930 Query: 322 ctggttccccaaccaatcaacttgacggcatgacctcccatgacgccacctgtgatgtgc 381 || |||||||||||||| | || || ||||||||||| ||| |||||| |||||| Sbjct: 929 ctagttccccaaccaataagtttaacagcatgacctccaatgttagaacctgttatgtgc 870 Query: 382 ttgtacactcctgacttgtagtgtgcgaagtcctcataaactgtgaaagcaacttctaca 441 || || ||||| || ||||| || || || ||||||||||| || |||| ||||| ||| Sbjct: 869 ttatagactccagatttgtaatgagcaaaatcctcataaacggtaaaagagacttcaaca 810 Query: 442 gggccattcttgtagacctctgccatgatgtcatgtggat 481 || |||||||| || |||||||||||||| || ||||||| Sbjct: 809 ggtccattcttataaacctctgccatgatatcttgtggat 770
>gb|AY114015.1| Arabidopsis thaliana putative cathepsin B cysteine protease (At4g01610) mRNA, complete cds Length = 1111 Score = 87.7 bits (44), Expect = 3e-14 Identities = 176/220 (80%) Strand = Plus / Minus Query: 262 tcatcaccccagcctctgttccactgatttgcaagaagccagtaatcctcgccagcatca 321 ||||||||||||||||||||||| |||||||| | | ||| ||||| || || || Sbjct: 947 tcatcaccccagcctctgttccattgatttgccatcaaccaataatcttctccttcactg 888 Query: 322 ctggttccccaaccaatcaacttgacggcatgacctcccatgacgccacctgtgatgtgc 381 || |||||||||||||| | || || ||||||||||| ||| |||||| |||||| Sbjct: 887 ctagttccccaaccaataagtttaacagcatgacctccaatgttagaacctgttatgtgc 828 Query: 382 ttgtacactcctgacttgtagtgtgcgaagtcctcataaactgtgaaagcaacttctaca 441 || || ||||| || ||||| || || || ||||||||||| || |||| ||||| ||| Sbjct: 827 ttatagactccagatttgtaatgagcaaaatcctcataaacggtaaaagagacttcaaca 768 Query: 442 gggccattcttgtagacctctgccatgatgtcatgtggat 481 || |||||||| || |||||||||||||| || ||||||| Sbjct: 767 ggtccattcttataaacctctgccatgatatcttgtggat 728
>gb|AF370193.1| Arabidopsis thaliana putative cathepsin B cysteine protease (At4g01610) mRNA, complete cds Length = 1391 Score = 87.7 bits (44), Expect = 3e-14 Identities = 176/220 (80%) Strand = Plus / Minus Query: 262 tcatcaccccagcctctgttccactgatttgcaagaagccagtaatcctcgccagcatca 321 ||||||||||||||||||||||| |||||||| | | ||| ||||| || || || Sbjct: 1059 tcatcaccccagcctctgttccattgatttgccatcaaccaataatcttctccttcactg 1000 Query: 322 ctggttccccaaccaatcaacttgacggcatgacctcccatgacgccacctgtgatgtgc 381 || |||||||||||||| | || || ||||||||||| ||| |||||| |||||| Sbjct: 999 ctagttccccaaccaataagtttaacagcatgacctccaatgttagaacctgttatgtgc 940 Query: 382 ttgtacactcctgacttgtagtgtgcgaagtcctcataaactgtgaaagcaacttctaca 441 || || ||||| || ||||| || || || ||||||||||| || |||| ||||| ||| Sbjct: 939 ttatagactccagatttgtaatgagcaaaatcctcataaacggtaaaagagacttcaaca 880 Query: 442 gggccattcttgtagacctctgccatgatgtcatgtggat 481 || |||||||| || |||||||||||||| || ||||||| Sbjct: 879 ggtccattcttataaacctctgccatgatatcttgtggat 840
>gb|AY065167.1| Arabidopsis thaliana unknown protein (T15B16.17a:T15B16.17b) mRNA, complete cds Length = 1337 Score = 87.7 bits (44), Expect = 3e-14 Identities = 176/220 (80%) Strand = Plus / Minus Query: 262 tcatcaccccagcctctgttccactgatttgcaagaagccagtaatcctcgccagcatca 321 ||||||||||||||||||||||| |||||||| | | ||| ||||| || || || Sbjct: 1046 tcatcaccccagcctctgttccattgatttgccatcaaccaataatcttctccttcactg 987 Query: 322 ctggttccccaaccaatcaacttgacggcatgacctcccatgacgccacctgtgatgtgc 381 || |||||||||||||| | || || ||||||||||| ||| |||||| |||||| Sbjct: 986 ctagttccccaaccaataagtttaacagcatgacctccaatgttagaacctgttatgtgc 927 Query: 382 ttgtacactcctgacttgtagtgtgcgaagtcctcataaactgtgaaagcaacttctaca 441 || || ||||| || ||||| || || || ||||||||||| || |||| ||||| ||| Sbjct: 926 ttatagactccagatttgtaatgagcaaaatcctcataaacggtaaaagagacttcaaca 867 Query: 442 gggccattcttgtagacctctgccatgatgtcatgtggat 481 || |||||||| || |||||||||||||| || ||||||| Sbjct: 866 ggtccattcttataaacctctgccatgatatcttgtggat 827
>dbj|AK221398.1| Arabidopsis thaliana mRNA for cathepsin B-like cysteine protease, complete cds, clone: RAFL25-46-G18 Length = 1336 Score = 87.7 bits (44), Expect = 3e-14 Identities = 176/220 (80%) Strand = Plus / Minus Query: 262 tcatcaccccagcctctgttccactgatttgcaagaagccagtaatcctcgccagcatca 321 ||||||||||||||||||||||| |||||||| | | ||| ||||| || || || Sbjct: 1013 tcatcaccccagcctctgttccattgatttgccatcaaccaataatcttctccttcactg 954 Query: 322 ctggttccccaaccaatcaacttgacggcatgacctcccatgacgccacctgtgatgtgc 381 || |||||||||||||| | || || ||||||||||| ||| |||||| |||||| Sbjct: 953 ctagttccccaaccaataagtttaacagcatgacctccaatgttagaacctgttatgtgc 894 Query: 382 ttgtacactcctgacttgtagtgtgcgaagtcctcataaactgtgaaagcaacttctaca 441 || || ||||| || ||||| || || || ||||||||||| || |||| ||||| ||| Sbjct: 893 ttatagactccagatttgtaatgagcaaaatcctcataaacggtaaaagagacttcaaca 834 Query: 442 gggccattcttgtagacctctgccatgatgtcatgtggat 481 || |||||||| || |||||||||||||| || ||||||| Sbjct: 833 ggtccattcttataaacctctgccatgatatcttgtggat 794
>dbj|AK176487.1| Arabidopsis thaliana mRNA for cathepsin B-like cysteine protease, complete cds, clone: RAFL24-30-A18 Length = 1399 Score = 87.7 bits (44), Expect = 3e-14 Identities = 176/220 (80%) Strand = Plus / Minus Query: 262 tcatcaccccagcctctgttccactgatttgcaagaagccagtaatcctcgccagcatca 321 ||||||||||||||||||||||| |||||||| | | ||| ||||| || || || Sbjct: 1090 tcatcaccccagcctctgttccattgatttgccatcaaccaataatcttctccttcactg 1031 Query: 322 ctggttccccaaccaatcaacttgacggcatgacctcccatgacgccacctgtgatgtgc 381 || |||||||||||||| | || || ||||||||||| ||| |||||| |||||| Sbjct: 1030 ctagttccccaaccaataagtttaacagcatgacctccaatgttagaacctgttatgtgc 971 Query: 382 ttgtacactcctgacttgtagtgtgcgaagtcctcataaactgtgaaagcaacttctaca 441 || || ||||| || ||||| || || || ||||||||||| || |||| ||||| ||| Sbjct: 970 ttatagactccagatttgtaatgagcaaaatcctcataaacggtaaaagagacttcaaca 911 Query: 442 gggccattcttgtagacctctgccatgatgtcatgtggat 481 || |||||||| || |||||||||||||| || ||||||| Sbjct: 910 ggtccattcttataaacctctgccatgatatcttgtggat 871
>dbj|AK176433.1| Arabidopsis thaliana mRNA for cathepsin B-like cysteine protease, complete cds, clone: RAFL24-18-F01 Length = 1332 Score = 87.7 bits (44), Expect = 3e-14 Identities = 176/220 (80%) Strand = Plus / Minus Query: 262 tcatcaccccagcctctgttccactgatttgcaagaagccagtaatcctcgccagcatca 321 ||||||||||||||||||||||| |||||||| | | ||| ||||| || || || Sbjct: 1006 tcatcaccccagcctctgttccattgatttgccatcaaccaataatcttctccttcactg 947 Query: 322 ctggttccccaaccaatcaacttgacggcatgacctcccatgacgccacctgtgatgtgc 381 || |||||||||||||| | || || ||||||||||| ||| |||||| |||||| Sbjct: 946 ctagttccccaaccaataagtttaacagcatgacctccaatgttagaacctgttatgtgc 887 Query: 382 ttgtacactcctgacttgtagtgtgcgaagtcctcataaactgtgaaagcaacttctaca 441 || || ||||| || ||||| || || || ||||||||||| || |||| ||||| ||| Sbjct: 886 ttatagactccagatttgtaatgagcaaaatcctcataaacggtaaaagagacttcaaca 827 Query: 442 gggccattcttgtagacctctgccatgatgtcatgtggat 481 || |||||||| || |||||||||||||| || ||||||| Sbjct: 826 ggtccattcttataaacctctgccatgatatcttgtggat 787
>dbj|AK176416.1| Arabidopsis thaliana mRNA for cathepsin B-like cysteine protease, complete cds, clone: RAFL24-14-K07 Length = 1432 Score = 87.7 bits (44), Expect = 3e-14 Identities = 176/220 (80%) Strand = Plus / Minus Query: 262 tcatcaccccagcctctgttccactgatttgcaagaagccagtaatcctcgccagcatca 321 ||||||||||||||||||||||| |||||||| | | ||| ||||| || || || Sbjct: 1102 tcatcaccccagcctctgttccattgatttgccatcaaccaataatcttctccttcactg 1043 Query: 322 ctggttccccaaccaatcaacttgacggcatgacctcccatgacgccacctgtgatgtgc 381 || |||||||||||||| | || || ||||||||||| ||| |||||| |||||| Sbjct: 1042 ctagttccccaaccaataagtttaacagcatgacctccaatgttagaacctgttatgtgc 983 Query: 382 ttgtacactcctgacttgtagtgtgcgaagtcctcataaactgtgaaagcaacttctaca 441 || || ||||| || ||||| || || || ||||||||||| || |||| ||||| ||| Sbjct: 982 ttatagactccagatttgtaatgagcaaaatcctcataaacggtaaaagagacttcaaca 923 Query: 442 gggccattcttgtagacctctgccatgatgtcatgtggat 481 || |||||||| || |||||||||||||| || ||||||| Sbjct: 922 ggtccattcttataaacctctgccatgatatcttgtggat 883
>dbj|AK176330.1| Arabidopsis thaliana mRNA for cathepsin B-like cysteine protease, complete cds, clone: RAFL23-32-C20 Length = 1340 Score = 87.7 bits (44), Expect = 3e-14 Identities = 176/220 (80%) Strand = Plus / Minus Query: 262 tcatcaccccagcctctgttccactgatttgcaagaagccagtaatcctcgccagcatca 321 ||||||||||||||||||||||| |||||||| | | ||| ||||| || || || Sbjct: 1013 tcatcaccccagcctctgttccattgatttgccatcaaccaataatcttctccttcactg 954 Query: 322 ctggttccccaaccaatcaacttgacggcatgacctcccatgacgccacctgtgatgtgc 381 || |||||||||||||| | || || ||||||||||| ||| |||||| |||||| Sbjct: 953 ctagttccccaaccaataagtttaacagcatgacctccaatgttagaacctgttatgtgc 894 Query: 382 ttgtacactcctgacttgtagtgtgcgaagtcctcataaactgtgaaagcaacttctaca 441 || || ||||| || ||||| || || || ||||||||||| || |||| ||||| ||| Sbjct: 893 ttatagactccagatttgtaatgagcaaaatcctcataaacggtaaaagagacttcaaca 834 Query: 442 gggccattcttgtagacctctgccatgatgtcatgtggat 481 || |||||||| || |||||||||||||| || ||||||| Sbjct: 833 ggtccattcttataaacctctgccatgatatcttgtggat 794
>dbj|AK176281.1| Arabidopsis thaliana mRNA for cathepsin B-like cysteine protease, complete cds, clone: RAFL23-21-C10 Length = 1290 Score = 87.7 bits (44), Expect = 3e-14 Identities = 176/220 (80%) Strand = Plus / Minus Query: 262 tcatcaccccagcctctgttccactgatttgcaagaagccagtaatcctcgccagcatca 321 ||||||||||||||||||||||| |||||||| | | ||| ||||| || || || Sbjct: 1006 tcatcaccccagcctctgttccattgatttgccatcaaccaataatcttctccttcactg 947 Query: 322 ctggttccccaaccaatcaacttgacggcatgacctcccatgacgccacctgtgatgtgc 381 || |||||||||||||| | || || ||||||||||| ||| |||||| |||||| Sbjct: 946 ctagttccccaaccaataagtttaacagcatgacctccaatgttagaacctgttatgtgc 887 Query: 382 ttgtacactcctgacttgtagtgtgcgaagtcctcataaactgtgaaagcaacttctaca 441 || || ||||| || ||||| || || || ||||||||||| || |||| ||||| ||| Sbjct: 886 ttatagactccagatttgtaatgagcaaaatcctcataaacggtaaaagagacttcaaca 827 Query: 442 gggccattcttgtagacctctgccatgatgtcatgtggat 481 || |||||||| || |||||||||||||| || ||||||| Sbjct: 826 ggtccattcttataaacctctgccatgatatcttgtggat 787
>dbj|AK176244.1| Arabidopsis thaliana mRNA for cathepsin B-like cysteine protease, complete cds, clone: RAFL23-13-K22 Length = 1340 Score = 87.7 bits (44), Expect = 3e-14 Identities = 176/220 (80%) Strand = Plus / Minus Query: 262 tcatcaccccagcctctgttccactgatttgcaagaagccagtaatcctcgccagcatca 321 ||||||||||||||||||||||| |||||||| | | ||| ||||| || || || Sbjct: 1013 tcatcaccccagcctctgttccattgatttgccatcaaccaataatcttctccttcactg 954 Query: 322 ctggttccccaaccaatcaacttgacggcatgacctcccatgacgccacctgtgatgtgc 381 || |||||||||||||| | || || ||||||||||| ||| |||||| |||||| Sbjct: 953 ctagttccccaaccaataagtttaacagcatgacctccaatgttagaacctgttatgtgc 894 Query: 382 ttgtacactcctgacttgtagtgtgcgaagtcctcataaactgtgaaagcaacttctaca 441 || || ||||| || ||||| || || || ||||||||||| || |||| ||||| ||| Sbjct: 893 ttatagactccagatttgtaatgagcaaaatcctcataaacggtaaaagagacttcaaca 834 Query: 442 gggccattcttgtagacctctgccatgatgtcatgtggat 481 || |||||||| || |||||||||||||| || ||||||| Sbjct: 833 ggtccattcttataaacctctgccatgatatcttgtggat 794
>dbj|AK176165.1| Arabidopsis thaliana mRNA for cathepsin B-like cysteine protease, complete cds, clone: RAFL23-01-L04 Length = 1340 Score = 87.7 bits (44), Expect = 3e-14 Identities = 176/220 (80%) Strand = Plus / Minus Query: 262 tcatcaccccagcctctgttccactgatttgcaagaagccagtaatcctcgccagcatca 321 ||||||||||||||||||||||| |||||||| | | ||| ||||| || || || Sbjct: 1013 tcatcaccccagcctctgttccattgatttgccatcaaccaataatcttctccttcactg 954 Query: 322 ctggttccccaaccaatcaacttgacggcatgacctcccatgacgccacctgtgatgtgc 381 || |||||||||||||| | || || ||||||||||| ||| |||||| |||||| Sbjct: 953 ctagttccccaaccaataagtttaacagcatgacctccaatgttagaacctgttatgtgc 894 Query: 382 ttgtacactcctgacttgtagtgtgcgaagtcctcataaactgtgaaagcaacttctaca 441 || || ||||| || ||||| || || || ||||||||||| || |||| ||||| ||| Sbjct: 893 ttatagactccagatttgtaatgagcaaaatcctcataaacggtaaaagagacttcaaca 834 Query: 442 gggccattcttgtagacctctgccatgatgtcatgtggat 481 || |||||||| || |||||||||||||| || ||||||| Sbjct: 833 ggtccattcttataaacctctgccatgatatcttgtggat 794
>dbj|AK175539.1| Arabidopsis thaliana mRNA for cathepsin B-like cysteine protease, complete cds, clone: RAFL21-96-A03 Length = 1342 Score = 87.7 bits (44), Expect = 3e-14 Identities = 176/220 (80%) Strand = Plus / Minus Query: 262 tcatcaccccagcctctgttccactgatttgcaagaagccagtaatcctcgccagcatca 321 ||||||||||||||||||||||| |||||||| | | ||| ||||| || || || Sbjct: 1016 tcatcaccccagcctctgttccattgatttgccatcaaccaataatcttctccttcactg 957 Query: 322 ctggttccccaaccaatcaacttgacggcatgacctcccatgacgccacctgtgatgtgc 381 || |||||||||||||| | || || ||||||||||| ||| |||||| |||||| Sbjct: 956 ctagttccccaaccaataagtttaacagcatgacctccaatgttagaacctgttatgtgc 897 Query: 382 ttgtacactcctgacttgtagtgtgcgaagtcctcataaactgtgaaagcaacttctaca 441 || || ||||| || ||||| || || || ||||||||||| || |||| ||||| ||| Sbjct: 896 ttatagactccagatttgtaatgagcaaaatcctcataaacggtaaaagagacttcaaca 837 Query: 442 gggccattcttgtagacctctgccatgatgtcatgtggat 481 || |||||||| || |||||||||||||| || ||||||| Sbjct: 836 ggtccattcttataaacctctgccatgatatcttgtggat 797
>dbj|AK175481.1| Arabidopsis thaliana mRNA for cathepsin B-like cysteine protease, complete cds, clone: RAFL21-91-G20 Length = 1343 Score = 87.7 bits (44), Expect = 3e-14 Identities = 176/220 (80%) Strand = Plus / Minus Query: 262 tcatcaccccagcctctgttccactgatttgcaagaagccagtaatcctcgccagcatca 321 ||||||||||||||||||||||| |||||||| | | ||| ||||| || || || Sbjct: 1013 tcatcaccccagcctctgttccattgatttgccatcaaccaataatcttctccttcactg 954 Query: 322 ctggttccccaaccaatcaacttgacggcatgacctcccatgacgccacctgtgatgtgc 381 || |||||||||||||| | || || ||||||||||| ||| |||||| |||||| Sbjct: 953 ctagttccccaaccaataagtttaacagcatgacctccaatgttagaacctgttatgtgc 894 Query: 382 ttgtacactcctgacttgtagtgtgcgaagtcctcataaactgtgaaagcaacttctaca 441 || || ||||| || ||||| || || || ||||||||||| || |||| ||||| ||| Sbjct: 893 ttatagactccagatttgtaatgagcaaaatcctcataaacggtaaaagagacttcaaca 834 Query: 442 gggccattcttgtagacctctgccatgatgtcatgtggat 481 || |||||||| || |||||||||||||| || ||||||| Sbjct: 833 ggtccattcttataaacctctgccatgatatcttgtggat 794
>dbj|AK175280.1| Arabidopsis thaliana mRNA for cathepsin B-like cysteine protease, complete cds, clone: RAFL21-71-M19 Length = 1342 Score = 87.7 bits (44), Expect = 3e-14 Identities = 176/220 (80%) Strand = Plus / Minus Query: 262 tcatcaccccagcctctgttccactgatttgcaagaagccagtaatcctcgccagcatca 321 ||||||||||||||||||||||| |||||||| | | ||| ||||| || || || Sbjct: 1015 tcatcaccccagcctctgttccattgatttgccatcaaccaataatcttctccttcactg 956 Query: 322 ctggttccccaaccaatcaacttgacggcatgacctcccatgacgccacctgtgatgtgc 381 || |||||||||||||| | || || ||||||||||| ||| |||||| |||||| Sbjct: 955 ctagttccccaaccaataagtttaacagcatgacctccaatgttagaacctgttatgtgc 896 Query: 382 ttgtacactcctgacttgtagtgtgcgaagtcctcataaactgtgaaagcaacttctaca 441 || || ||||| || ||||| || || || ||||||||||| || |||| ||||| ||| Sbjct: 895 ttatagactccagatttgtaatgagcaaaatcctcataaacggtaaaagagacttcaaca 836 Query: 442 gggccattcttgtagacctctgccatgatgtcatgtggat 481 || |||||||| || |||||||||||||| || ||||||| Sbjct: 835 ggtccattcttataaacctctgccatgatatcttgtggat 796
>gb|BT001190.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 1207 Score = 87.7 bits (44), Expect = 3e-14 Identities = 176/220 (80%) Strand = Plus / Minus Query: 262 tcatcaccccagcctctgttccactgatttgcaagaagccagtaatcctcgccagcatca 321 ||||||||||||||||||||||| |||||||| | | ||| ||||| || || || Sbjct: 947 tcatcaccccagcctctgttccattgatttgccatcaaccaataatcttctccttcactg 888 Query: 322 ctggttccccaaccaatcaacttgacggcatgacctcccatgacgccacctgtgatgtgc 381 || |||||||||||||| | || || ||||||||||| ||| |||||| |||||| Sbjct: 887 ctagttccccaaccaataagtttaacagcatgacctccaatgttagaacctgttatgtgc 828 Query: 382 ttgtacactcctgacttgtagtgtgcgaagtcctcataaactgtgaaagcaacttctaca 441 || || ||||| || ||||| || || || ||||||||||| || |||| ||||| ||| Sbjct: 827 ttatagactccagatttgtaatgagcaaaatcctcataaacggtaaaagagacttcaaca 768 Query: 442 gggccattcttgtagacctctgccatgatgtcatgtggat 481 || |||||||| || |||||||||||||| || ||||||| Sbjct: 767 ggtccattcttataaacctctgccatgatatcttgtggat 728
>gb|DQ492287.1| Nicotiana benthamiana cathepsin B (CathB) mRNA, complete cds Length = 1353 Score = 85.7 bits (43), Expect = 1e-13 Identities = 169/211 (80%) Strand = Plus / Minus Query: 245 tgatcttgaagtatccgtcatcaccccagcctctgttccactgatttgcaagaagccagt 304 ||||||| ||||| |||||||||||||| ||||| ||||| ||||| ||||||||||| | Sbjct: 958 tgatcttaaagtaaccgtcatcaccccaacctctattccattgattggcaagaagccaat 899 Query: 305 aatcctcgccagcatcactggttccccaaccaatcaacttgacggcatgacctcccatga 364 | ||||| ||| | ||| ||||||||| || || | || || ||||| |||||||| | Sbjct: 898 agtcctctccatcctcagaggttccccatccgatgagtttaacagcatggcctcccatta 839 Query: 365 cgccacctgtgatgtgcttgtacactcctgacttgtagtgtgcgaagtcctcataaactg 424 | |||| || | |||||||| ||||| || |||||||| ||||| ||||| ||||| | Sbjct: 838 catcaccagttacatgcttgtaaactccagatttgtagtgagcgaaatcctcgtaaacag 779 Query: 425 tgaaagcaacttctacagggccattcttgta 455 | || | || ||||| || ||||||||||| Sbjct: 778 taaatgagacctctactggtccattcttgta 748
>emb|AL161492.2|ATCHRIV4 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 4 Length = 198697 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 413 cctcataaactgtgaaagcaacttctacagggccattcttgtagacctctgccatgatgt 472 |||||||||| || |||| ||||| ||||| |||||||| || |||||||||||||| | Sbjct: 118956 cctcataaacggtaaaagagacttcaacaggtccattcttataaacctctgccatgatat 118897 Query: 473 catgtggat 481 | ||||||| Sbjct: 118896 cttgtggat 118888 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 263 catcaccccagcctctgttccactgatttgc 293 |||||||||||||||||||||| |||||||| Sbjct: 119280 catcaccccagcctctgttccattgatttgc 119250
>gb|AF104919.1|T15B16 Arabidopsis thaliana BAC T15B16 Length = 90596 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 413 cctcataaactgtgaaagcaacttctacagggccattcttgtagacctctgccatgatgt 472 |||||||||| || |||| ||||| ||||| |||||||| || |||||||||||||| | Sbjct: 75017 cctcataaacggtaaaagagacttcaacaggtccattcttataaacctctgccatgatat 75076 Query: 473 catgtggat 481 | ||||||| Sbjct: 75077 cttgtggat 75085 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 263 catcaccccagcctctgttccactgatttgc 293 |||||||||||||||||||||| |||||||| Sbjct: 74693 catcaccccagcctctgttccattgatttgc 74723
>gb|AY450641.1| Solanum tuberosum cathepsin B-like cysteine proteinase mRNA, complete cds Length = 1262 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 245 tgatcttgaagtatccgtcatcaccccagcctctgttcca 284 |||||||||||||||| || |||||||||||||| ||||| Sbjct: 955 tgatcttgaagtatccatcttcaccccagcctctattcca 916
>dbj|AB215097.1| Cyprinus carpio CTSB mRNA for cathepsin B preproprotein, complete cds Length = 1470 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 408 gaagtcctcataaactgtgaaagcaacttctacagggccattcttgtagacctct 462 |||||||||||| || |||||||| | ||||| |||||||||||||||| |||| Sbjct: 854 gaagtcctcatagacagtgaaagctccctctactgggccattcttgtagagctct 800
>gb|AF101239.1|AF101239 Ipomoea batatas cathepsin B-like cysteine proteinase (CathB) mRNA, complete cds Length = 1248 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 244 atgatcttgaagtatccgtcatcaccccagcctctgttccactgatt 290 |||||||||||||| || ||| | ||||||| ||||||||||||||| Sbjct: 972 atgatcttgaagtacccatcaccgccccagcttctgttccactgatt 926
>gb|BT014624.1| Lycopersicon esculentum clone 134127R, mRNA sequence Length = 1263 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 247 atcttgaagtatccgtcatcaccccagcctctgttcca 284 |||||||||||||| || |||||||||||||| ||||| Sbjct: 992 atcttgaagtatccatcttcaccccagcctctattcca 955
>gb|AC064879.3|AC064879 Arabidopsis thaliana chromosome I BAC T6A9 genomic sequence, complete sequence Length = 109180 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Minus Query: 413 cctcataaactgtgaaagcaacttctacagggccattcttgtagacctctgccatgatgt 472 |||| ||||| || |||||||| || ||||| ||||||||||| ||||| ||||| |||| Sbjct: 49857 cctcgtaaacggtaaaagcaacctcgacaggtccattcttgtaaacctcagccataatgt 49798 Query: 473 c 473 | Sbjct: 49797 c 49797 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Minus Query: 369 acctgtgatgtgcttgtacactcctgacttgtagtgtgcgaagtcct 415 |||||| ||||||||||||||||| || ||||| || || ||||||| Sbjct: 52574 acctgttatgtgcttgtacactccagatttgtaatgcgcaaagtcct 52528 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 263 catcaccccagcctctgttccactgatttgcaag 296 |||||||||||| || |||||| ||||||||||| Sbjct: 52768 catcaccccagcttcggttccattgatttgcaag 52735 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 263 catcaccccagcctctgttccactgatttgcaag 296 |||||||||||| || |||||| ||||||||||| Sbjct: 50164 catcaccccagcttcggttccattgatttgcaag 50131
>emb|AJ538369.1|NTA538369 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-004 Length = 372 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Minus Query: 369 acctgtgatgtgcttgtacactcctgacttgtagtgtgcgaagtcctcataaactgt 425 |||||| | ||||||||| ||||||||||||||||| || || ||||| || ||||| Sbjct: 350 acctgttacgtgcttgtaaactcctgacttgtagtgagcaaaatcctcgtacactgt 294
>gb|U89959.1| Arabidopsis thaliana BAC T7I23, complete sequence Length = 106973 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Minus Query: 413 cctcataaactgtgaaagcaacttctacagggccattcttgtagacctctgccatgatgt 472 |||| ||||| || |||||||| || ||||| ||||||||||| ||||| ||||| |||| Sbjct: 105229 cctcgtaaacggtaaaagcaacctcgacaggtccattcttgtaaacctcagccataatgt 105170 Query: 473 c 473 | Sbjct: 105169 c 105169 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 263 catcaccccagcctctgttccactgatttgcaag 296 |||||||||||| || |||||| ||||||||||| Sbjct: 105536 catcaccccagcttcggttccattgatttgcaag 105503
>gb|AC149038.2| Medicago truncatula chromosome 7 BAC clone mth2-29a5, complete sequence Length = 136566 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Plus Query: 317 catcactggttccccaaccaatcaacttgacggcatgacc 356 ||||||| |||||||| ||||||||||| || |||||||| Sbjct: 20715 catcacttgttccccacccaatcaactttactgcatgacc 20754 Score = 46.1 bits (23), Expect = 0.11 Identities = 59/71 (83%) Strand = Plus / Plus Query: 413 cctcataaactgtgaaagcaacttctacagggccattcttgtagacctctgccatgatgt 472 |||||||||| ||||| |||||||| || || || ||||| || || ||||||||||| | Sbjct: 15644 cctcataaacagtgaatgcaacttcaactggcccgttcttataaacttctgccatgatat 15703 Query: 473 catgtggatca 483 | || |||||| Sbjct: 15704 cttggggatca 15714 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 ttccactgatttgcaagaagc 300 ||||||||||||||||||||| Sbjct: 20567 ttccactgatttgcaagaagc 20587 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 369 acctgtgatgtgcttgtacactcctgacttgta 401 |||||||||||| ||||| |||||||| ||||| Sbjct: 13882 acctgtgatgtgtttgtaaactcctgatttgta 13914 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 ttccactgatttgcaagaagc 300 ||||||||||||||||||||| Sbjct: 13681 ttccactgatttgcaagaagc 13701
>gb|AY829838.1| Lonomia obliqua cysteine peptidase 2 cathepsin-B-like mRNA, complete cds Length = 1017 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 424 gtgaaagcaacttctacagggccattctt 452 |||||||| ||||||||||||||||||| Sbjct: 770 gtgaaagcgccttctacagggccattctt 742
>ref|XM_792861.1| PREDICTED: Strongylocentrotus purpuratus similar to CG3051-PA, isoform A (LOC593385), mRNA Length = 486 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 455 agacctctgccatgatgtcatgtgg 479 |||||||| |||||||||||||||| Sbjct: 136 agacctctcccatgatgtcatgtgg 112
>gb|BC102997.1| Bos taurus cathepsin B, mRNA (cDNA clone MGC:128239 IMAGE:7986891), complete cds Length = 1935 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 442 gggccattcttgtagacctctgccatgat 470 |||||||| ||||||| |||||||||||| Sbjct: 805 gggccatttttgtagatctctgccatgat 777
>gb|AC107065.5| Bos taurus clone rp42-513g13, complete sequence Length = 175949 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 442 gggccattcttgtagacctctgccatgat 470 |||||||| ||||||| |||||||||||| Sbjct: 65328 gggccatttttgtagatctctgccatgat 65356
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 167 cgctaccggcgatgttcttcatcgagggc 195 ||||| ||||| ||||||||||||||||| Sbjct: 2454057 cgctatcggcgttgttcttcatcgagggc 2454029
>ref|NM_174031.1| Bos taurus cathepsin B (CTSB), mRNA Length = 2491 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 442 gggccattcttgtagacctctgccatgat 470 |||||||| ||||||| |||||||||||| Sbjct: 743 gggccatttttgtagatctctgccatgat 715
>gb|U16342.1|BTCATHB6 Bos taurus cathepsin B gene, exon 8 Length = 382 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 442 gggccattcttgtagacctctgccatgat 470 |||||||| ||||||| |||||||||||| Sbjct: 229 gggccatttttgtagatctctgccatgat 201
>gb|M64620.1|BOVCATHBD B.tauris cathepsin B mRNA, 3' end Length = 370 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 442 gggccattcttgtagacctctgccatgat 470 |||||||| ||||||| |||||||||||| Sbjct: 105 gggccatttttgtagatctctgccatgat 77
>gb|L06075.1|BOVCATHB Bos taurus cathepsin B mRNA, complete cds Length = 1973 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 442 gggccattcttgtagacctctgccatgat 470 |||||||| ||||||| |||||||||||| Sbjct: 743 gggccatttttgtagatctctgccatgat 715
>ref|XM_457137.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0B03960g) partial mRNA Length = 3057 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tcttgaagtatccgtcatca 267 |||||||||||||||||||| Sbjct: 865 tcttgaagtatccgtcatca 846
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 tcaacttgacggcatgacct 357 |||||||||||||||||||| Sbjct: 2570248 tcaacttgacggcatgacct 2570229
>ref|XM_780892.1| PREDICTED: Strongylocentrotus purpuratus similar to cadherin-like 23 (LOC580862), mRNA Length = 2622 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 tatgatcttgaagtatccgt 262 |||||||||||||||||||| Sbjct: 2322 tatgatcttgaagtatccgt 2341
>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces hansenii Length = 1349926 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tcttgaagtatccgtcatca 267 |||||||||||||||||||| Sbjct: 327115 tcttgaagtatccgtcatca 327096
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 gaggacgaggcgctgctcaa 149 |||||||||||||||||||| Sbjct: 3657278 gaggacgaggcgctgctcaa 3657297
>dbj|AB169521.1| Macaca fascicularis brain cDNA, clone: QccE-13673, similar to human cathepsin B (CTSB), transcript variant 1, mRNA, RefSeq: NM_001908.2 Length = 2089 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 442 gggccattcttgtagacctctgccatgatgtc 473 ||||| |||||||||| ||| ||||||||||| Sbjct: 882 gggccgttcttgtagatctcggccatgatgtc 851
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome Length = 2174500 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 ataaactgtgaaagcaactt 436 |||||||||||||||||||| Sbjct: 371739 ataaactgtgaaagcaactt 371720
>gb|AF283476.1|AF283476 Ipomoea batatas cathepsin B-like cysteine proteinase gene, complete cds Length = 3334 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 263 catcaccccagcctctgttccactgatt 290 |||| ||||||| ||||||||||||||| Sbjct: 2832 catcgccccagcttctgttccactgatt 2805
>emb|AL113933.1|CNS01B91 Botrytis cinerea strain T4 cDNA library Length = 660 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 gacttgtagtgtgcgaagtc 413 |||||||||||||||||||| Sbjct: 88 gacttgtagtgtgcgaagtc 69
>emb|AL111992.1|CNS019R4 Botrytis cinerea strain T4 cDNA library Length = 660 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 gacttgtagtgtgcgaagtc 413 |||||||||||||||||||| Sbjct: 198 gacttgtagtgtgcgaagtc 179
>gb|AC141366.2| Homo sapiens fosmid clone XXFOS-87310E7 from 2, complete sequence Length = 22886 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 cctcataaactgtgaaagca 432 |||||||||||||||||||| Sbjct: 7343 cctcataaactgtgaaagca 7362
>emb|Z24605.1|HS356TE5 H. sapiens (D2S395) DNA segment containing (CA) repeat; clone AFM356te5; single read Length = 327 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 cctcataaactgtgaaagca 432 |||||||||||||||||||| Sbjct: 42 cctcataaactgtgaaagca 23
>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5) Length = 2199546 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 acggcatgacctcccatgac 365 |||||||||||||||||||| Sbjct: 38428 acggcatgacctcccatgac 38447 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,822,469 Number of Sequences: 3902068 Number of extensions: 3822469 Number of successful extensions: 87934 Number of sequences better than 10.0: 76 Number of HSP's better than 10.0 without gapping: 76 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 87703 Number of HSP's gapped (non-prelim): 225 length of query: 483 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 461 effective length of database: 17,147,199,772 effective search space: 7904859094892 effective search space used: 7904859094892 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)