Clone Name | rbart08g08 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_476301.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1348 Score = 387 bits (195), Expect = e-104 Identities = 267/291 (91%) Strand = Plus / Minus Query: 206 tggtcgagcgcgttggggccggagcagtagctgcggtaggggtcccagacccactgcacc 265 ||||||||||||||||||||||||||||||||| || ||||| ||| |||||||||||| Sbjct: 1138 tggtcgagcgcgttggggccggagcagtagctgaggatggggttccacacccactgcacc 1079 Query: 266 aggaaccggcgcccgccgacgccgttcaggttgtaggacgcgccggaccggccgtcggtg 325 | |||| ||| |||||||||||||| | |||||| ||||||||||| |||||||||||| Sbjct: 1078 aagaacttgcggccgccgacgccgttgacgttgtacgacgcgccggagcggccgtcggtg 1019 Query: 326 agcagctgccccgtgtacgcgccgccgccgccggtgccgtaaatgccctcgcagaggtcg 385 |||||||| || ||||||||||||||||||||||||||||| || |||||||| |||||| Sbjct: 1018 agcagctggccggtgtacgcgccgccgccgccggtgccgtagatcccctcgcacaggtcg 959 Query: 386 gcgatctccgtcgggaaagacgggtccccgccggcgtaccacgcgttggccagcgggttg 445 ||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||| Sbjct: 958 gcgatctccgtcgggaacgacgggtcctcgccggcgtaccacgcgttggcgagcgggttc 899 Query: 446 gacgccatctcggccagctcgtgcgcgatgacgctcaccatgccgtccacg 496 ||||||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 898 gacgccagctcggccagctcgtgcgcgatgacgctcaccatcccgtccacg 848
>gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete sequence Length = 136866 Score = 387 bits (195), Expect = e-104 Identities = 267/291 (91%) Strand = Plus / Minus Query: 206 tggtcgagcgcgttggggccggagcagtagctgcggtaggggtcccagacccactgcacc 265 ||||||||||||||||||||||||||||||||| || ||||| ||| |||||||||||| Sbjct: 110289 tggtcgagcgcgttggggccggagcagtagctgaggatggggttccacacccactgcacc 110230 Query: 266 aggaaccggcgcccgccgacgccgttcaggttgtaggacgcgccggaccggccgtcggtg 325 | |||| ||| |||||||||||||| | |||||| ||||||||||| |||||||||||| Sbjct: 110229 aagaacttgcggccgccgacgccgttgacgttgtacgacgcgccggagcggccgtcggtg 110170 Query: 326 agcagctgccccgtgtacgcgccgccgccgccggtgccgtaaatgccctcgcagaggtcg 385 |||||||| || ||||||||||||||||||||||||||||| || |||||||| |||||| Sbjct: 110169 agcagctggccggtgtacgcgccgccgccgccggtgccgtagatcccctcgcacaggtcg 110110 Query: 386 gcgatctccgtcgggaaagacgggtccccgccggcgtaccacgcgttggccagcgggttg 445 ||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||| Sbjct: 110109 gcgatctccgtcgggaacgacgggtcctcgccggcgtaccacgcgttggcgagcgggttc 110050 Query: 446 gacgccatctcggccagctcgtgcgcgatgacgctcaccatgccgtccacg 496 ||||||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 110049 gacgccagctcggccagctcgtgcgcgatgacgctcaccatcccgtccacg 109999
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 387 bits (195), Expect = e-104 Identities = 267/291 (91%) Strand = Plus / Minus Query: 206 tggtcgagcgcgttggggccggagcagtagctgcggtaggggtcccagacccactgcacc 265 ||||||||||||||||||||||||||||||||| || ||||| ||| |||||||||||| Sbjct: 1790073 tggtcgagcgcgttggggccggagcagtagctgaggatggggttccacacccactgcacc 1790014 Query: 266 aggaaccggcgcccgccgacgccgttcaggttgtaggacgcgccggaccggccgtcggtg 325 | |||| ||| |||||||||||||| | |||||| ||||||||||| |||||||||||| Sbjct: 1790013 aagaacttgcggccgccgacgccgttgacgttgtacgacgcgccggagcggccgtcggtg 1789954 Query: 326 agcagctgccccgtgtacgcgccgccgccgccggtgccgtaaatgccctcgcagaggtcg 385 |||||||| || ||||||||||||||||||||||||||||| || |||||||| |||||| Sbjct: 1789953 agcagctggccggtgtacgcgccgccgccgccggtgccgtagatcccctcgcacaggtcg 1789894 Query: 386 gcgatctccgtcgggaaagacgggtccccgccggcgtaccacgcgttggccagcgggttg 445 ||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||| Sbjct: 1789893 gcgatctccgtcgggaacgacgggtcctcgccggcgtaccacgcgttggcgagcgggttc 1789834 Query: 446 gacgccatctcggccagctcgtgcgcgatgacgctcaccatgccgtccacg 496 ||||||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1789833 gacgccagctcggccagctcgtgcgcgatgacgctcaccatcccgtccacg 1789783 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 337 cgtgtacgcgccgccgccgccg 358 |||||||||||||||||||||| Sbjct: 8290000 cgtgtacgcgccgccgccgccg 8290021 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 22718319 cgccgccgccgccggtgccg 22718300
>dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0679C08 Length = 156266 Score = 387 bits (195), Expect = e-104 Identities = 267/291 (91%) Strand = Plus / Minus Query: 206 tggtcgagcgcgttggggccggagcagtagctgcggtaggggtcccagacccactgcacc 265 ||||||||||||||||||||||||||||||||| || ||||| ||| |||||||||||| Sbjct: 115222 tggtcgagcgcgttggggccggagcagtagctgaggatggggttccacacccactgcacc 115163 Query: 266 aggaaccggcgcccgccgacgccgttcaggttgtaggacgcgccggaccggccgtcggtg 325 | |||| ||| |||||||||||||| | |||||| ||||||||||| |||||||||||| Sbjct: 115162 aagaacttgcggccgccgacgccgttgacgttgtacgacgcgccggagcggccgtcggtg 115103 Query: 326 agcagctgccccgtgtacgcgccgccgccgccggtgccgtaaatgccctcgcagaggtcg 385 |||||||| || ||||||||||||||||||||||||||||| || |||||||| |||||| Sbjct: 115102 agcagctggccggtgtacgcgccgccgccgccggtgccgtagatcccctcgcacaggtcg 115043 Query: 386 gcgatctccgtcgggaaagacgggtccccgccggcgtaccacgcgttggccagcgggttg 445 ||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||| Sbjct: 115042 gcgatctccgtcgggaacgacgggtcctcgccggcgtaccacgcgttggcgagcgggttc 114983 Query: 446 gacgccatctcggccagctcgtgcgcgatgacgctcaccatgccgtccacg 496 ||||||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 114982 gacgccagctcggccagctcgtgcgcgatgacgctcaccatcccgtccacg 114932
>dbj|AK105690.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C03, full insert sequence Length = 1482 Score = 387 bits (195), Expect = e-104 Identities = 267/291 (91%) Strand = Plus / Minus Query: 206 tggtcgagcgcgttggggccggagcagtagctgcggtaggggtcccagacccactgcacc 265 ||||||||||||||||||||||||||||||||| || ||||| ||| |||||||||||| Sbjct: 1166 tggtcgagcgcgttggggccggagcagtagctgaggatggggttccacacccactgcacc 1107 Query: 266 aggaaccggcgcccgccgacgccgttcaggttgtaggacgcgccggaccggccgtcggtg 325 | |||| ||| |||||||||||||| | |||||| ||||||||||| |||||||||||| Sbjct: 1106 aagaacttgcggccgccgacgccgttgacgttgtacgacgcgccggagcggccgtcggtg 1047 Query: 326 agcagctgccccgtgtacgcgccgccgccgccggtgccgtaaatgccctcgcagaggtcg 385 |||||||| || ||||||||||||||||||||||||||||| || |||||||| |||||| Sbjct: 1046 agcagctggccggtgtacgcgccgccgccgccggtgccgtagatcccctcgcacaggtcg 987 Query: 386 gcgatctccgtcgggaaagacgggtccccgccggcgtaccacgcgttggccagcgggttg 445 ||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||| Sbjct: 986 gcgatctccgtcgggaacgacgggtcctcgccggcgtaccacgcgttggcgagcgggttc 927 Query: 446 gacgccatctcggccagctcgtgcgcgatgacgctcaccatgccgtccacg 496 ||||||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 926 gacgccagctcggccagctcgtgcgcgatgacgctcaccatcccgtccacg 876
>dbj|AK068474.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155H19, full insert sequence Length = 1351 Score = 387 bits (195), Expect = e-104 Identities = 267/291 (91%) Strand = Plus / Minus Query: 206 tggtcgagcgcgttggggccggagcagtagctgcggtaggggtcccagacccactgcacc 265 ||||||||||||||||||||||||||||||||| || ||||| ||| |||||||||||| Sbjct: 1140 tggtcgagcgcgttggggccggagcagtagctgaggatggggttccacacccactgcacc 1081 Query: 266 aggaaccggcgcccgccgacgccgttcaggttgtaggacgcgccggaccggccgtcggtg 325 | |||| ||| |||||||||||||| | |||||| ||||||||||| |||||||||||| Sbjct: 1080 aagaacttgcggccgccgacgccgttgacgttgtacgacgcgccggagcggccgtcggtg 1021 Query: 326 agcagctgccccgtgtacgcgccgccgccgccggtgccgtaaatgccctcgcagaggtcg 385 |||||||| || ||||||||||||||||||||||||||||| || |||||||| |||||| Sbjct: 1020 agcagctggccggtgtacgcgccgccgccgccggtgccgtagatcccctcgcacaggtcg 961 Query: 386 gcgatctccgtcgggaaagacgggtccccgccggcgtaccacgcgttggccagcgggttg 445 ||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||| Sbjct: 960 gcgatctccgtcgggaacgacgggtcctcgccggcgtaccacgcgttggcgagcgggttc 901 Query: 446 gacgccatctcggccagctcgtgcgcgatgacgctcaccatgccgtccacg 496 ||||||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 900 gacgccagctcggccagctcgtgcgcgatgacgctcaccatcccgtccacg 850
>gb|AF488412.1| Sorghum bicolor BAC 131L1, complete sequence Length = 130987 Score = 260 bits (131), Expect = 4e-66 Identities = 251/291 (86%) Strand = Plus / Minus Query: 206 tggtcgagcgcgttggggccggagcagtagctgcggtaggggtcccagacccactgcacc 265 ||||||||||||||||||||||||||||||||| | ||||| ||| ||||||||||| Sbjct: 102697 tggtcgagcgcgttggggccggagcagtagctgagcacggggttccaaacccactgcacg 102638 Query: 266 aggaaccggcgcccgccgacgccgttcaggttgtaggacgcgccggaccggccgtcggtg 325 ||||||| || || |||||||| || | ||| || | ||||||||| || | || ||| Sbjct: 102637 aggaacctccggccaccgacgccattaacgttatacgccgcgccggagcgcgcatccgtg 102578 Query: 326 agcagctgccccgtgtacgcgccgccgccgccggtgccgtaaatgccctcgcagaggtcg 385 || |||||||| ||||||||||| ||||||||||||||||| || |||||||||||||| Sbjct: 102577 aggagctgcccggtgtacgcgccaccgccgccggtgccgtagatcccctcgcagaggtca 102518 Query: 386 gcgatctccgtcgggaaagacgggtccccgccggcgtaccacgcgttggccagcgggttg 445 |||||||| |||||||| || ||||| | || ||||||||||||||||| ||||||||| Sbjct: 102517 gcgatctcggtcgggaacgaggggtcactcccagcgtaccacgcgttggcgagcgggttg 102458 Query: 446 gacgccatctcggccagctcgtgcgcgatgacgctcaccatgccgtccacg 496 ||||| | ||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 102457 gacgcgagctcggccagctcgtgcgcgatgacgctgaccatcccgtccacg 102407
>gb|AY105178.1| Zea mays PCO152151 mRNA sequence Length = 505 Score = 182 bits (92), Expect = 7e-43 Identities = 119/128 (92%) Strand = Plus / Minus Query: 368 atgccctcgcagaggtcggcgatctccgtcgggaaagacgggtccccgccggcgtaccac 427 ||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 504 atgccctcgcagaggtctgcgatctccgtggggaacgacgggtcgccgccggcgtaccag 445 Query: 428 gcgttggccagcgggttggacgccatctcggccagctcgtgcgcgatgacgctcaccatg 487 |||||||| |||||||||||||||||||| || |||||||||||||||||||| |||||| Sbjct: 444 gcgttggcgagcgggttggacgccatctccgcgagctcgtgcgcgatgacgctgaccatg 385 Query: 488 ccgtccac 495 |||||||| Sbjct: 384 ccgtccac 377
>ref|XM_478215.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1361 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 416 ccggcgtaccacgcgttggccagcgggttggacgccatctcggccagctcgtgcgcgatg 475 ||||||||||||||||| |||||||||| | ||||| ||| |||||||||||| ||| Sbjct: 794 ccggcgtaccacgcgttcaccagcgggttcgtcgccagctccgccagctcgtgcccgagc 735 Query: 476 acgctcaccatgccgtccac 495 ||| ||||||| |||||||| Sbjct: 734 acgatcaccatcccgtccac 715 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 244 ggggtcccagacccactgcaccaggaaccggcgcccgccgacgccgttcaggttgtagga 303 ||||| ||||| ||||||||||| |||||| || ||| ||||||||| | ||||||||| Sbjct: 966 ggggttccagagccactgcaccatgaaccgccggccgttgacgccgttgacgttgtagga 907 Query: 304 cgcgccg 310 |||||| Sbjct: 906 ggcgccg 900 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 376 gcagaggtcggcgatctccgtcgg 399 |||||||||||||||||||||||| Sbjct: 834 gcagaggtcggcgatctccgtcgg 811
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 416 ccggcgtaccacgcgttggccagcgggttggacgccatctcggccagctcgtgcgcgatg 475 ||||||||||||||||| |||||||||| | ||||| ||| |||||||||||| ||| Sbjct: 18565505 ccggcgtaccacgcgttcaccagcgggttcgtcgccagctccgccagctcgtgcccgagc 18565446 Query: 476 acgctcaccatgccgtccac 495 ||| ||||||| |||||||| Sbjct: 18565445 acgatcaccatcccgtccac 18565426 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 244 ggggtcccagacccactgcaccaggaaccggcgcccgccgacgccgttcaggttgtagga 303 ||||| ||||| ||||||||||| |||||| || ||| ||||||||| | ||||||||| Sbjct: 18565677 ggggttccagagccactgcaccatgaaccgccggccgttgacgccgttgacgttgtagga 18565618 Query: 304 cgcgccg 310 |||||| Sbjct: 18565617 ggcgccg 18565611 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 376 gcagaggtcggcgatctccgtcgg 399 |||||||||||||||||||||||| Sbjct: 18565545 gcagaggtcggcgatctccgtcgg 18565522 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 9046926 cgccgccgccgccggtgccg 9046907
>dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0005E02 Length = 89380 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 416 ccggcgtaccacgcgttggccagcgggttggacgccatctcggccagctcgtgcgcgatg 475 ||||||||||||||||| |||||||||| | ||||| ||| |||||||||||| ||| Sbjct: 18047 ccggcgtaccacgcgttcaccagcgggttcgtcgccagctccgccagctcgtgcccgagc 17988 Query: 476 acgctcaccatgccgtccac 495 ||| ||||||| |||||||| Sbjct: 17987 acgatcaccatcccgtccac 17968 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 244 ggggtcccagacccactgcaccaggaaccggcgcccgccgacgccgttcaggttgtagga 303 ||||| ||||| ||||||||||| |||||| || ||| ||||||||| | ||||||||| Sbjct: 18219 ggggttccagagccactgcaccatgaaccgccggccgttgacgccgttgacgttgtagga 18160 Query: 304 cgcgccg 310 |||||| Sbjct: 18159 ggcgccg 18153 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 376 gcagaggtcggcgatctccgtcgg 399 |||||||||||||||||||||||| Sbjct: 18087 gcagaggtcggcgatctccgtcgg 18064
>dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1457_D07 Length = 103688 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 416 ccggcgtaccacgcgttggccagcgggttggacgccatctcggccagctcgtgcgcgatg 475 ||||||||||||||||| |||||||||| | ||||| ||| |||||||||||| ||| Sbjct: 94261 ccggcgtaccacgcgttcaccagcgggttcgtcgccagctccgccagctcgtgcccgagc 94202 Query: 476 acgctcaccatgccgtccac 495 ||| ||||||| |||||||| Sbjct: 94201 acgatcaccatcccgtccac 94182 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 244 ggggtcccagacccactgcaccaggaaccggcgcccgccgacgccgttcaggttgtagga 303 ||||| ||||| ||||||||||| |||||| || ||| ||||||||| | ||||||||| Sbjct: 94433 ggggttccagagccactgcaccatgaaccgccggccgttgacgccgttgacgttgtagga 94374 Query: 304 cgcgccg 310 |||||| Sbjct: 94373 ggcgccg 94367 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 376 gcagaggtcggcgatctccgtcgg 399 |||||||||||||||||||||||| Sbjct: 94301 gcagaggtcggcgatctccgtcgg 94278
>dbj|AK064235.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-H11, full insert sequence Length = 1361 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 416 ccggcgtaccacgcgttggccagcgggttggacgccatctcggccagctcgtgcgcgatg 475 ||||||||||||||||| |||||||||| | ||||| ||| |||||||||||| ||| Sbjct: 794 ccggcgtaccacgcgttcaccagcgggttcgtcgccagctccgccagctcgtgcccgagc 735 Query: 476 acgctcaccatgccgtccac 495 ||| ||||||| |||||||| Sbjct: 734 acgatcaccatcccgtccac 715 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 244 ggggtcccagacccactgcaccaggaaccggcgcccgccgacgccgttcaggttgtagga 303 ||||| ||||| ||||||||||| |||||| || ||| ||||||||| | ||||||||| Sbjct: 966 ggggttccagagccactgcaccatgaaccgccggccgttgacgccgttgacgttgtagga 907 Query: 304 cgcgccg 310 |||||| Sbjct: 906 ggcgccg 900 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 376 gcagaggtcggcgatctccgtcgg 399 |||||||||||||||||||||||| Sbjct: 834 gcagaggtcggcgatctccgtcgg 811
>emb|AL627281.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 17/20 Length = 265050 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 286 gccgttcaggttgtaggacgcgccggac 313 |||||||||||||| ||||||||||||| Sbjct: 223158 gccgttcaggttgttggacgcgccggac 223185
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 286 gccgttcaggttgtaggacgcgccggac 313 |||||||||||||| ||||||||||||| Sbjct: 4180805 gccgttcaggttgttggacgcgccggac 4180832
>gb|AF133185.1|AF133185 Salmonella typhi BigA and BigB genes, complete cds Length = 6928 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Minus Query: 286 gccgttcaggttgtaggacgcgccggac 313 |||||||||||||| ||||||||||||| Sbjct: 4856 gccgttcaggttgttggacgcgccggac 4829
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 343 cgcgccgccgccgccggtgccgt 365 ||||||||||||||||||||||| Sbjct: 15947833 cgcgccgccgccgccggtgccgt 15947811
>dbj|AP005565.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1238_G07 Length = 78304 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 343 cgcgccgccgccgccggtgccgt 365 ||||||||||||||||||||||| Sbjct: 18546 cgcgccgccgccgccggtgccgt 18524
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 335 cccgtgtacgcgccgccgccgccggtg 361 ||||||||||| ||||||||||||||| Sbjct: 3137892 cccgtgtacgccccgccgccgccggtg 3137918
>ref|XM_466887.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1293 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 335 cccgtgtacgcgccgccgccgccggtgccg 364 ||||||||| |||||||||||||| ||||| Sbjct: 113 cccgtgtactcgccgccgccgccgctgccg 142
>ref|XM_367642.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07553.4) partial mRNA Length = 1464 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 343 cgcgccgccgccgccggtgccg 364 |||||||||||||||||||||| Sbjct: 1176 cgcgccgccgccgccggtgccg 1155
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 343 cgcgccgccgccgccggtgccg 364 |||||||||||||||||||||| Sbjct: 350225 cgcgccgccgccgccggtgccg 350204
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 337 cgtgtacgcgccgccgccgccg 358 |||||||||||||||||||||| Sbjct: 25502250 cgtgtacgcgccgccgccgccg 25502271
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Minus Query: 335 cccgtgtacgcgccgccgccgccggtgccg 364 ||||||||| |||||||||||||| ||||| Sbjct: 25274297 cccgtgtactcgccgccgccgccgctgccg 25274268 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 9277211 cgccgccgccgccggtgccg 9277192 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 4274154 cgccgccgccgccggtgccg 4274173
>dbj|AP005527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0603C10 Length = 187620 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 337 cgtgtacgcgccgccgccgccg 358 |||||||||||||||||||||| Sbjct: 83505 cgtgtacgcgccgccgccgccg 83526
>dbj|AP006452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1250G12 Length = 144590 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Minus Query: 335 cccgtgtacgcgccgccgccgccggtgccg 364 ||||||||| |||||||||||||| ||||| Sbjct: 41448 cccgtgtactcgccgccgccgccgctgccg 41419
>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0711H09 Length = 185858 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 337 cgtgtacgcgccgccgccgccg 358 |||||||||||||||||||||| Sbjct: 133566 cgtgtacgcgccgccgccgccg 133587
>dbj|AK105924.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-A07, full insert sequence Length = 1293 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 335 cccgtgtacgcgccgccgccgccggtgccg 364 ||||||||| |||||||||||||| ||||| Sbjct: 113 cccgtgtactcgccgccgccgccgctgccg 142
>gb|DQ119665.1| Chlamydomonas reinhardtii central apparatus associated protein C1a-34 mRNA, complete cds Length = 921 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 cgccgccgccgccggtgccgt 365 ||||||||||||||||||||| Sbjct: 825 cgccgccgccgccggtgccgt 845
>ref|XM_953988.1| Neurospora crassa OR74A hypothetical protein (NCU09171.1) partial mRNA Length = 2043 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 344 gcgccgccgccgccggtgccg 364 ||||||||||||||||||||| Sbjct: 1642 gcgccgccgccgccggtgccg 1662
>ref|XM_331562.1| Neurospora crassa OR74A hypothetical protein (NCU09171.1) partial mRNA Length = 2043 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 344 gcgccgccgccgccggtgccg 364 ||||||||||||||||||||| Sbjct: 1642 gcgccgccgccgccggtgccg 1662
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 334 ccccgtgtacgcgccgccgccgccg 358 ||||||| ||||||||||||||||| Sbjct: 744698 ccccgtgaacgcgccgccgccgccg 744722
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 cgtgtacgcgccgccgccgcc 357 ||||||||||||||||||||| Sbjct: 4883475 cgtgtacgcgccgccgccgcc 4883455 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 cgtcagcaaatcatgagctca 40 ||||||||||||||||||||| Sbjct: 3469132 cgtcagcaaatcatgagctca 3469112 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 12739298 cgccgccgccgccggtgccg 12739279 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 2209755 cgccgccgccgccggtgccg 2209774
>gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0064E16, complete sequence Length = 159092 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 337 cgtgtacgcgccgccgccgcc 357 ||||||||||||||||||||| Sbjct: 112072 cgtgtacgcgccgccgccgcc 112092
>emb|AL031722.20|HS429E7 Human DNA sequence from clone LA16c-429E7 on chromosome 16 Contains the HAGH (hydroxyacyl glutathione hydrolase) gene, ESTs, STSs, GSSs and CpG Islands, complete sequence Length = 38080 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 cccagacccactgcaccagga 269 ||||||||||||||||||||| Sbjct: 12795 cccagacccactgcaccagga 12775
>gb|AC012180.6| Homo sapiens chromosome 16 clone RP11-31I10, complete sequence Length = 69437 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 cccagacccactgcaccagga 269 ||||||||||||||||||||| Sbjct: 57355 cccagacccactgcaccagga 57335
>gb|AE006639.1| Homo sapiens 16p13.3 sequence section 7 of 8 Length = 270150 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 cccagacccactgcaccagga 269 ||||||||||||||||||||| Sbjct: 211810 cccagacccactgcaccagga 211790
>ref|NM_204861.1| Gallus gallus alanyl (membrane) aminopeptidase (aminopeptidase N, aminopeptidase M, microsomal aminopeptidase, CD13, p150) (ANPEP), mRNA Length = 3181 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 457 ggccagctcgtgcgcgatgacgctcacca 485 |||||||||||| ||||||||| |||||| Sbjct: 1191 ggccagctcgtgggcgatgacggtcacca 1163
>emb|CR614453.1| full-length cDNA clone CS0DF007YH06 of Fetal brain of Homo sapiens (human) Length = 1630 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 cccagacccactgcaccagga 269 ||||||||||||||||||||| Sbjct: 530 cccagacccactgcaccagga 550
>gb|AC104428.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1123F12, complete sequence Length = 103330 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 cgtcagcaaatcatgagctca 40 ||||||||||||||||||||| Sbjct: 41243 cgtcagcaaatcatgagctca 41263
>emb|AJ577158.1|SCA577158 Struthio camelus partial mRNA for aminopeptidase (apn gene) Length = 1055 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 457 ggccagctcgtgcgcgatgacgctcacca 485 |||||||||||| ||||||||| |||||| Sbjct: 596 ggccagctcgtgggcgatgacggtcacca 568
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 cgtgtacgcgccgccgccgcc 357 ||||||||||||||||||||| Sbjct: 4882690 cgtgtacgcgccgccgccgcc 4882670 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 cgtcagcaaatcatgagctca 40 ||||||||||||||||||||| Sbjct: 3469243 cgtcagcaaatcatgagctca 3469223 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 12736061 cgccgccgccgccggtgccg 12736042 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 2209767 cgccgccgccgccggtgccg 2209786
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 343 cgcgccgccgccgccggtgcc 363 ||||||||||||||||||||| Sbjct: 2599966 cgcgccgccgccgccggtgcc 2599946
>dbj|D87992.1| Gallus gallus mRNA for aminopeptidase Ey, complete cds Length = 3181 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 457 ggccagctcgtgcgcgatgacgctcacca 485 |||||||||||| ||||||||| |||||| Sbjct: 1191 ggccagctcgtgggcgatgacggtcacca 1163
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 gccgccgccgccggtgccgt 365 |||||||||||||||||||| Sbjct: 269930 gccgccgccgccggtgccgt 269911
>ref|XM_472360.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 849 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 383 cgccgccgccgccggtgccg 402
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 451 catctcggccagctcgtgcgcgat 474 |||||||||||||||| ||||||| Sbjct: 229760 catctcggccagctcgcgcgcgat 229783
>gb|AF287967.1| Homo sapiens homeobox B7 (HOXB7) gene, partial cds; and homeobox B6 (HOXB6), homeobox B5 (HOXB5), homeobox B4 (HOXB4), and homeobox B3 (HOXB3) genes, complete cds Length = 59339 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 cgcgccgccgccgccggtgc 362 |||||||||||||||||||| Sbjct: 25680 cgcgccgccgccgccggtgc 25699
>gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074E19 map R1938, complete sequence Length = 160847 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 102669 cgccgccgccgccggtgccg 102688
>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10, complete sequence Length = 156772 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 53734 cgccgccgccgccggtgccg 53753
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 1191408 cgccgccgccgccggtgccg 1191427
>gb|AC135568.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078F08, complete sequence Length = 165440 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 71852 cgccgccgccgccggtgccg 71833
>gb|AY316747.1| Rhizobium sp. NGR234 megaplasmid 2 contig 1, complete sequence Length = 357655 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 gcaccaggaaccggcgcccg 280 |||||||||||||||||||| Sbjct: 75507 gcaccaggaaccggcgcccg 75526
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 1648909 cgccgccgccgccggtgccg 1648928
>gb|AF294681.2| Bucco capensis recombination activating protein 1 (RAG-1) gene, partial cds Length = 1914 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gatggtgaaagagaaacgaa 195 |||||||||||||||||||| Sbjct: 828 gatggtgaaagagaaacgaa 809
>ref|XM_449735.1| Candida glabrata CBS138 hypothetical protein (CAGL0M08954g) partial mRNA Length = 2553 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tggaggaatactacgacgac 153 |||||||||||||||||||| Sbjct: 347 tggaggaatactacgacgac 366
>gb|AF547430.1| Mycobacteriophage PG1, complete genome Length = 68999 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 31306 cgccgccgccgccggtgccg 31287
>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030C11, complete sequence Length = 156647 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 100049 cgccgccgccgccggtgccg 100068
>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence Length = 1400893 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tggaggaatactacgacgac 153 |||||||||||||||||||| Sbjct: 891110 tggaggaatactacgacgac 891129
>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13 Length = 349306 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 157575 cgccgccgccgccggtgccg 157594
>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16 Length = 346362 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 103867 cgccgccgccgccggtgccg 103886
>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12 Length = 348134 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 282078 cgccgccgccgccggtgccg 282097
>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14 Length = 327650 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 205530 cgccgccgccgccggtgccg 205549
>emb|AL731642.3|OSJN00289 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0014D23, complete sequence Length = 133759 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 124212 cgccgccgccgccggtgccg 124193
>gb|AC103702.3| Homo sapiens chromosome 17, clone RP11-357H14, complete sequence Length = 187386 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 cgcgccgccgccgccggtgc 362 |||||||||||||||||||| Sbjct: 107251 cgcgccgccgccgccggtgc 107270
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 342 acgcgccgccgccgccggtgccgt 365 ||||||||||| |||||||||||| Sbjct: 1531115 acgcgccgccggcgccggtgccgt 1531092
>gb|AE005877.1| Caulobacter crescentus CB15 section 203 of 359 of the complete genome Length = 12778 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 tcccagacccactgcaccaggaac 271 |||||||||||||||| ||||||| Sbjct: 9124 tcccagacccactgcagcaggaac 9147
>gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0016G17, complete sequence Length = 141041 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 acgcgccgccgccgccggtg 361 |||||||||||||||||||| Sbjct: 65517 acgcgccgccgccgccggtg 65498
>gb|AE012235.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 143 of 460 of the complete genome Length = 8650 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 6440 cgccgccgccgccggtgccg 6459
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 20743 cgccgccgccgccggtgccg 20762
>gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0081A17, from chromosome 3, complete sequence Length = 134821 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 116301 cgccgccgccgccggtgccg 116282
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 3457978 cgccgccgccgccggtgccg 3457959
>gb|BC042789.1| Mus musculus cDNA sequence BC049987, mRNA (cDNA clone IMAGE:4220695) Length = 943 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 ggtaggggtcccagacccac 259 |||||||||||||||||||| Sbjct: 84 ggtaggggtcccagacccac 103
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 cgcgccgccgccgccggtgc 362 |||||||||||||||||||| Sbjct: 23468373 cgcgccgccgccgccggtgc 23468392 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 19835750 cgccgccgccgccggtgccg 19835731 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 16685663 cgccgccgccgccggtgccg 16685682
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 27044639 cgccgccgccgccggtgccg 27044620 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 acgcgccgccgccgccggtgccgt 365 ||||||||||||||||| |||||| Sbjct: 19938169 acgcgccgccgccgccgttgccgt 19938192 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 acgcgccgccgccgccggtg 361 |||||||||||||||||||| Sbjct: 1799488 acgcgccgccgccgccggtg 1799469
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 18492537 cgccgccgccgccggtgccg 18492518 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 2326670 cgccgccgccgccggtgccg 2326689
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 acgcgccgccgccgccggtg 361 |||||||||||||||||||| Sbjct: 15211818 acgcgccgccgccgccggtg 15211799
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 4167255 cgccgccgccgccggtgccg 4167274
>gb|AC087547.2|AC087547 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0040I11, complete sequence Length = 129420 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 acgcgccgccgccgccggtg 361 |||||||||||||||||||| Sbjct: 120431 acgcgccgccgccgccggtg 120412
>gb|AC009789.21|AC009789 Homo sapiens chromosome 17, clone RP11-361K8, complete sequence Length = 168215 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 cgcgccgccgccgccggtgc 362 |||||||||||||||||||| Sbjct: 111120 cgcgccgccgccgccggtgc 111139
>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050D18, complete sequence Length = 126350 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 93751 cgccgccgccgccggtgccg 93732
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 cgtcggtgagcagctgcccc 337 |||||||||||||||||||| Sbjct: 2315733 cgtcggtgagcagctgcccc 2315752
>gb|AE004652.1| Pseudomonas aeruginosa PAO1, section 213 of 529 of the complete genome Length = 11558 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 6170 cgccgccgccgccggtgccg 6151
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 gccgccgccgccggtgccgt 365 |||||||||||||||||||| Sbjct: 2012800 gccgccgccgccggtgccgt 2012781
>dbj|AP004838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0504A05 Length = 148360 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 90968 cgccgccgccgccggtgccg 90987
>dbj|AP003622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0633E08 Length = 136471 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 5266 cgccgccgccgccggtgccg 5247
>dbj|AP005966.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1047H05 Length = 187273 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 183728 cgccgccgccgccggtgccg 183709
>dbj|AP003756.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1370_E02 Length = 128326 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 37333 cgccgccgccgccggtgccg 37314
>dbj|AP003755.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1354_H07 Length = 157974 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 98369 cgccgccgccgccggtgccg 98350
>dbj|AP005924.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0011J03 Length = 176461 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 37465 cgccgccgccgccggtgccg 37446
>emb|AJ583671.1| Vibrio fischeri fnr gene for FNR type regulator Length = 953 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 ccaaaacatcgtcagcaaatcatg 34 ||||||| |||||||||||||||| Sbjct: 559 ccaaaacttcgtcagcaaatcatg 582
>dbj|AK000839.1| Homo sapiens cDNA FLJ20832 fis, clone ADKA03033 Length = 1951 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 cgcgccgccgccgccggtgc 362 |||||||||||||||||||| Sbjct: 14 cgcgccgccgccgccggtgc 33
>dbj|AK110580.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-E08, full insert sequence Length = 1232 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 430 cgccgccgccgccggtgccg 449
>dbj|AK109914.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-B02, full insert sequence Length = 1371 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 330 cgccgccgccgccggtgccg 311
>dbj|AK106342.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-G10, full insert sequence Length = 1416 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 531 cgccgccgccgccggtgccg 512
>dbj|AK103197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122A02, full insert sequence Length = 1058 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 458 cgccgccgccgccggtgccg 439
>dbj|AK099395.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000J11, full insert sequence Length = 1857 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 342 acgcgccgccgccgccggtgccgt 365 ||||||||||||||||| |||||| Sbjct: 834 acgcgccgccgccgccgttgccgt 811
>dbj|AK099186.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101N09, full insert sequence Length = 700 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 427 cgccgccgccgccggtgccg 408
>dbj|AK071741.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110B12, full insert sequence Length = 1603 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 114 cgccgccgccgccggtgccg 133
>dbj|AK071009.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080L10, full insert sequence Length = 1010 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 489 cgccgccgccgccggtgccg 470
>dbj|AK062715.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-C07, full insert sequence Length = 509 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 43 cgccgccgccgccggtgccg 24
>dbj|AK061613.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-B07, full insert sequence Length = 1729 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 342 acgcgccgccgccgccggtgccgt 365 ||||||||||||||||| |||||| Sbjct: 828 acgcgccgccgccgccgttgccgt 805
>dbj|AK059799.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-F05, full insert sequence Length = 1023 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 cgcgccgccgccgccggtgc 362 |||||||||||||||||||| Sbjct: 103 cgcgccgccgccgccggtgc 122
>dbj|AK058243.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-H08, full insert sequence Length = 712 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 429 cgccgccgccgccggtgccg 410
>gb|AF131156.1|AF131156 Mus musculus immunoglobulin kappa light chain variable region gene, partial cds Length = 297 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ggtcccagacccactgcacc 265 |||||||||||||||||||| Sbjct: 219 ggtcccagacccactgcacc 200
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 ccaaaacatcgtcagcaaatcatg 34 ||||||| |||||||||||||||| Sbjct: 1461176 ccaaaacttcgtcagcaaatcatg 1461199
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 ctcggccagctcgtgcgcga 473 |||||||||||||||||||| Sbjct: 715805 ctcggccagctcgtgcgcga 715824
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 acgcgccgccgccgccggtg 361 |||||||||||||||||||| Sbjct: 15220059 acgcgccgccgccgccggtg 15220040
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 18651938 cgccgccgccgccggtgccg 18651919 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 2334451 cgccgccgccgccggtgccg 2334470
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 26970228 cgccgccgccgccggtgccg 26970209 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 acgcgccgccgccgccggtgccgt 365 ||||||||||||||||| |||||| Sbjct: 19864383 acgcgccgccgccgccgttgccgt 19864406 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 acgcgccgccgccgccggtg 361 |||||||||||||||||||| Sbjct: 1799466 acgcgccgccgccgccggtg 1799447
>emb|AL713905.6|CNS07YQ5 Oryza sativa chromosome 12, . BAC OJ1584_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131300 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 111598 cgccgccgccgccggtgccg 111617
>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165433 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 342 acgcgccgccgccgccggtgccgt 365 ||||||||||||||||| |||||| Sbjct: 89091 acgcgccgccgccgccgttgccgt 89068
>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21, complete sequence Length = 139298 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 cgcgccgccgccgccggtgc 362 |||||||||||||||||||| Sbjct: 24276 cgcgccgccgccgccggtgc 24295
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 acgcgccgccgccgccggtg 361 |||||||||||||||||||| Sbjct: 40994 acgcgccgccgccgccggtg 41013
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 ggaaccggcgcccgccgacg 286 |||||||||||||||||||| Sbjct: 2143787 ggaaccggcgcccgccgacg 2143806 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cgccgccgccgccggtgccg 364 |||||||||||||||||||| Sbjct: 516617 cgccgccgccgccggtgccg 516636
>dbj|AB047645.1| Hepatitis C virus gene for polyprotein, complete cds, clone:JCH-6 Length = 9683 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 atggatgtcccgaggaagga 113 |||||||||||||||||||| Sbjct: 3570 atggatgtcccgaggaagga 3551
>gb|U11696.1|SBU11696 Sorghum bicolor dehydrin (DHN1) mRNA, complete cds Length = 748 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 gccgccgccgccggtgccgt 365 |||||||||||||||||||| Sbjct: 388 gccgccgccgccggtgccgt 369
>dbj|AB034704.1| Rubrivivax gelatinosus photosynthetic gene cluster, complete cds, stain:IL144 Length = 58996 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 cgcgccgccgccgccggtgc 362 |||||||||||||||||||| Sbjct: 7131 cgcgccgccgccgccggtgc 7150
>dbj|D25499.1|MUSIGKLCB Mouse mRNA for Ig kappa light chain, variable region (partial cds) Length = 316 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 aggggtcccagacccactgc 262 |||||||||||||||||||| Sbjct: 201 aggggtcccagacccactgc 182 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,597,732 Number of Sequences: 3902068 Number of extensions: 3597732 Number of successful extensions: 217692 Number of sequences better than 10.0: 120 Number of HSP's better than 10.0 without gapping: 134 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 201384 Number of HSP's gapped (non-prelim): 16308 length of query: 496 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 474 effective length of database: 17,147,199,772 effective search space: 8127772691928 effective search space used: 8127772691928 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)