ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart08g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467638.1| Oryza sativa (japonica cultivar-group), mRNA 174 1e-40
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 174 1e-40
3dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic D... 174 1e-40
4dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
5dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
6gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome... 121 2e-24
7dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
8gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 121 2e-24
9dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 113 5e-22
10dbj|AP005619.3| Oryza sativa (japonica cultivar-group) genomic D... 113 5e-22
11dbj|AP005527.3| Oryza sativa (japonica cultivar-group) genomic D... 113 5e-22
12dbj|AK108686.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 5e-22
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 107 3e-20
14dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 107 3e-20
15gb|AC107225.2| Oryza sativa (japonica cultivar-group) chromosome... 107 3e-20
16ref|NM_188691.1| Oryza sativa (japonica cultivar-group), predic... 105 1e-19
17dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
18dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
19dbj|AK062747.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 1e-19
20ref|XM_483067.1| Oryza sativa (japonica cultivar-group), mRNA 62 2e-06
21ref|NM_102707.2| Arabidopsis thaliana carboxylic ester hydrolase... 50 0.006
22ref|NM_102708.2| Arabidopsis thaliana unknown protein AT1G29680 ... 50 0.006
23gb|AY065046.1| Arabidopsis thaliana At1g29670/F15D2_22 mRNA, com... 50 0.006
24emb|BX815677.1|CNS0AE1G Arabidopsis thaliana Full-length cDNA Co... 50 0.006
25emb|BX816814.1|CNS0ABMA Arabidopsis thaliana Full-length cDNA Co... 50 0.006
26gb|AC068667.6|AC068667 Arabidopsis thaliana chromosome 1 BAC F15... 50 0.006
27gb|AY086296.1| Arabidopsis thaliana clone 23556 mRNA, complete s... 50 0.006
28dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.092
29ref|XM_469846.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.36
30gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genom... 44 0.36
31gb|CP000249.1| Frankia sp. CcI3, complete genome 44 0.36
32dbj|AB099524.1| Oryza sativa (japonica cultivar-group) ORC5 mRNA... 44 0.36
33dbj|AK063449.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.36
34ref|NM_196893.1| Oryza sativa (japonica cultivar-group) putative... 42 1.4
35gb|AF461424.2| Oryza sativa chromosome 3 clone OSJNBa0016B07, co... 42 1.4
36gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 gen... 42 1.4
37dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
38dbj|AK108201.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
39dbj|AK060625.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
40gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.4
41gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
42ref|NM_114900.2| Arabidopsis thaliana carboxylic ester hydrolase... 40 5.6
43ref|XM_323959.1| Neurospora crassa OR74A predicted protein (NCU0... 40 5.6
44ref|XM_953754.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.6
45ref|XM_546782.2| PREDICTED: Canis familiaris similar to Protein ... 40 5.6
46gb|AC124969.12| Medicago truncatula clone mth2-15o15, complete s... 40 5.6
47gb|AF508154.1| Pseudomonas aeruginosa UDP-GlcNAc C6 dehydratase ... 40 5.6
48emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.6
49emb|BX640432.1| Bordetella parapertussis strain 12822, complete ... 40 5.6
50emb|BX294012.1|NC80A10 Neurospora crassa DNA linkage group V Cos... 40 5.6
51emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete ... 40 5.6
52emb|AL132976.2|ATF11C1 Arabidopsis thaliana DNA chromosome 3, BA... 40 5.6
53gb|AF498420.1| Pseudomonas aeruginosa serotype 09 putative O-ant... 40 5.6
54gb|AF498417.1| Pseudomonas aeruginosa serotype 06 putative O-ant... 40 5.6
55gb|AF498416.1| Pseudomonas aeruginosa serotype 05 putative O-ant... 40 5.6
56gb|AF498415.1| Pseudomonas aeruginosa serotype 04 putative O-ant... 40 5.6
57gb|AF498414.1| Pseudomonas aeruginosa serotype 03 putative O-ant... 40 5.6
58gb|AF498413.1| Pseudomonas aeruginosa serotype 020 putative O-an... 40 5.6
59gb|AF498412.1| Pseudomonas aeruginosa serotype 02 putative O-ant... 40 5.6
60gb|AF498411.1| Pseudomonas aeruginosa serotype 019 putative O-an... 40 5.6
61gb|AF498408.1| Pseudomonas aeruginosa serotype 016 putative O-an... 40 5.6
62gb|AF498407.1| Pseudomonas aeruginosa serotype 015 putative O-an... 40 5.6
63gb|AF498405.1| Pseudomonas aeruginosa serotype 014 putative O-an... 40 5.6
64gb|AF498404.1| Pseudomonas aeruginosa serotype 013 putative O-an... 40 5.6
65gb|AF498403.1| Pseudomonas aeruginosa serotype 012 putative O-an... 40 5.6
66gb|AF498402.1| Pseudomonas aeruginosa serotype 011 putative O-an... 40 5.6
67gb|AF498401.1| Pseudomonas aeruginosa serotype 010 putative O-an... 40 5.6
68gb|AF498400.1| Pseudomonas aeruginosa serotype 01 putative O-ant... 40 5.6
69gb|AC007527.6| Homo sapiens 12p12 BAC RPCI11-4N23 (Roswell Park ... 40 5.6
70gb|AC026443.4| Homo sapiens chromosome 5 clone CTD-2296H22, comp... 40 5.6
71gb|AE004738.1| Pseudomonas aeruginosa PAO1, section 299 of 529 o... 40 5.6
72gb|AF540991.1| Pseudomonas aeruginosa isolate 2-164 O-antigen bi... 40 5.6
73gb|AF540990.1| Pseudomonas aeruginosa isolate 1-60 O-antigen bio... 40 5.6
74dbj|AK117654.1| Arabidopsis thaliana At3g50400 mRNA for unknown ... 40 5.6
75gb|AF035937.1|AF035937 Pseudomonas aeruginosa strain IATS O6 Rps... 40 5.6
76emb|AJ328447.1|HSA328447 Homo sapiens genomic sequence surroundi... 40 5.6
77gb|U50396.1|PAU50396 Pseudomonas aeruginosa Wzz (Rol) (wzz (rol)... 40 5.6 
>ref|XM_467638.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1074

 Score =  174 bits (88), Expect = 1e-40
 Identities = 133/148 (89%)
 Strand = Plus / Minus

                                                                        
Query: 271  ggcggtcgtcatgccggcccagaggcggtcggcgatgacccggttggcggcgtcggaggt 330
            |||| ||| |||| || |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1005 ggcgctcggcatggcgtcccagaggaggtcggcgatgacccggttggcggcgtcggaggt 946

                                                                        
Query: 331  gtggtacgcgtcccagaacacgtacgccttgcggtcgcggcagggcgtcgagtccggcag 390
            |||||||||||||||||| ||| ||||||||||||||| |||||||  ||||| ||||||
Sbjct: 945  gtggtacgcgtcccagaagacgaacgccttgcggtcgctgcagggccgcgagttcggcag 886

                                        
Query: 391  gcagaggcccccgaccttggtgtccacg 418
            ||| |||||||| ||| | |||||||||
Sbjct: 885  gcacaggccccccaccgtcgtgtccacg 858
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  174 bits (88), Expect = 1e-40
 Identities = 133/148 (89%)
 Strand = Plus / Plus

                                                                            
Query: 271      ggcggtcgtcatgccggcccagaggcggtcggcgatgacccggttggcggcgtcggaggt 330
                |||| ||| |||| || |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 30573192 ggcgctcggcatggcgtcccagaggaggtcggcgatgacccggttggcggcgtcggaggt 30573251

                                                                            
Query: 331      gtggtacgcgtcccagaacacgtacgccttgcggtcgcggcagggcgtcgagtccggcag 390
                |||||||||||||||||| ||| ||||||||||||||| |||||||  ||||| ||||||
Sbjct: 30573252 gtggtacgcgtcccagaagacgaacgccttgcggtcgctgcagggccgcgagttcggcag 30573311

                                            
Query: 391      gcagaggcccccgaccttggtgtccacg 418
                ||| |||||||| ||| | |||||||||
Sbjct: 30573312 gcacaggccccccaccgtcgtgtccacg 30573339
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>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0643A10
          Length = 187931

 Score =  174 bits (88), Expect = 1e-40
 Identities = 133/148 (89%)
 Strand = Plus / Plus

                                                                         
Query: 271   ggcggtcgtcatgccggcccagaggcggtcggcgatgacccggttggcggcgtcggaggt 330
             |||| ||| |||| || |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 85200 ggcgctcggcatggcgtcccagaggaggtcggcgatgacccggttggcggcgtcggaggt 85259

                                                                         
Query: 331   gtggtacgcgtcccagaacacgtacgccttgcggtcgcggcagggcgtcgagtccggcag 390
             |||||||||||||||||| ||| ||||||||||||||| |||||||  ||||| ||||||
Sbjct: 85260 gtggtacgcgtcccagaagacgaacgccttgcggtcgctgcagggccgcgagttcggcag 85319

                                         
Query: 391   gcagaggcccccgaccttggtgtccacg 418
             ||| |||||||| ||| | |||||||||
Sbjct: 85320 gcacaggccccccaccgtcgtgtccacg 85347
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  135 bits (68), Expect = 1e-28
 Identities = 107/120 (89%)
 Strand = Plus / Plus

                                                                            
Query: 283      gccggcccagaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtc 342
                |||| |||||||| |||||| ||||||||| ||||||||||||||| ||||||||| |||
Sbjct: 24130892 gccgtcccagaggaggtcggtgatgacccgattggcggcgtcggagttgtggtacgtgtc 24130951

                                                                            
Query: 343      ccagaacacgtacgccttgcggtcgcggcagggcgtcgagtccggcaggcagaggccccc 402
                |||||| ||| ||||||||||||||| |||||||  ||||| ||||||||| ||||||||
Sbjct: 24130952 ccagaagacgaacgccttgcggtcgctgcagggccgcgagttcggcaggcacaggccccc 24131011



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 311      cggttggcggcgtcggaggtg 331
                |||||||||||||||||||||
Sbjct: 24130839 cggttggcggcgtcggaggtg 24130859
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>dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0028A08
          Length = 150818

 Score =  135 bits (68), Expect = 1e-28
 Identities = 107/120 (89%)
 Strand = Plus / Plus

                                                                         
Query: 283   gccggcccagaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtc 342
             |||| |||||||| |||||| ||||||||| ||||||||||||||| ||||||||| |||
Sbjct: 84378 gccgtcccagaggaggtcggtgatgacccgattggcggcgtcggagttgtggtacgtgtc 84437

                                                                         
Query: 343   ccagaacacgtacgccttgcggtcgcggcagggcgtcgagtccggcaggcagaggccccc 402
             |||||| ||| ||||||||||||||| |||||||  ||||| ||||||||| ||||||||
Sbjct: 84438 ccagaagacgaacgccttgcggtcgctgcagggccgcgagttcggcaggcacaggccccc 84497



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 311   cggttggcggcgtcggaggtg 331
             |||||||||||||||||||||
Sbjct: 84325 cggttggcggcgtcggaggtg 84345
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>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0015P05 map C53961S, complete sequence
          Length = 175121

 Score =  121 bits (61), Expect = 2e-24
 Identities = 73/77 (94%)
 Strand = Plus / Plus

                                                                         
Query: 291   agaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtcccagaaca 350
             |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 22926 agaggcggtcggcgatgacctggttggcggcgtcggaggtgtggtaggcgtcccagaaca 22985

                              
Query: 351   cgtacgccttgcggtcg 367
             || ||||| ||||||||
Sbjct: 22986 cgaacgccgtgcggtcg 23002
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  121 bits (61), Expect = 2e-24
 Identities = 73/77 (94%)
 Strand = Plus / Plus

                                                                            
Query: 291      agaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtcccagaaca 350
                |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 11236568 agaggcggtcggcgatgacctggttggcggcgtcggaggtgtggtaggcgtcccagaaca 11236627

                                 
Query: 351      cgtacgccttgcggtcg 367
                || ||||| ||||||||
Sbjct: 11236628 cgaacgccgtgcggtcg 11236644
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  121 bits (61), Expect = 2e-24
 Identities = 73/77 (94%)
 Strand = Plus / Plus

                                                                            
Query: 291      agaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtcccagaaca 350
                |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 11315757 agaggcggtcggcgatgacctggttggcggcgtcggaggtgtggtaggcgtcccagaaca 11315816

                                 
Query: 351      cgtacgccttgcggtcg 367
                || ||||| ||||||||
Sbjct: 11315817 cgaacgccgtgcggtcg 11315833
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  113 bits (57), Expect = 5e-22
 Identities = 72/77 (93%)
 Strand = Plus / Minus

                                                                           
Query: 291     agaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtcccagaaca 350
               |||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||
Sbjct: 8249178 agaggcggtcggcgatgacctggttggcagcgtcggaggtgtggtaggcgtcccagaaca 8249119

                                
Query: 351     cgtacgccttgcggtcg 367
               || ||||| ||||||||
Sbjct: 8249118 cgaacgccgtgcggtcg 8249102



 Score = 46.1 bits (23), Expect = 0.092
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                          
Query: 313     gttggcggcgtcggaggtgtggtacgcgtcccagaacacgtac 355
               |||||||  ||||| || ||||||| |||||||||||||||||
Sbjct: 6748423 gttggcgcggtcggtggggtggtactcgtcccagaacacgtac 6748381
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>dbj|AP005619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0624H09
          Length = 158719

 Score =  113 bits (57), Expect = 5e-22
 Identities = 72/77 (93%)
 Strand = Plus / Minus

                                                                          
Query: 291    agaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtcccagaaca 350
              |||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||
Sbjct: 141541 agaggcggtcggcgatgacctggttggcagcgtcggaggtgtggtaggcgtcccagaaca 141482

                               
Query: 351    cgtacgccttgcggtcg 367
              || ||||| ||||||||
Sbjct: 141481 cgaacgccgtgcggtcg 141465
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>dbj|AP005527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0603C10
          Length = 187620

 Score =  113 bits (57), Expect = 5e-22
 Identities = 72/77 (93%)
 Strand = Plus / Minus

                                                                         
Query: 291   agaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtcccagaaca 350
             |||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||
Sbjct: 42683 agaggcggtcggcgatgacctggttggcagcgtcggaggtgtggtaggcgtcccagaaca 42624

                              
Query: 351   cgtacgccttgcggtcg 367
             || ||||| ||||||||
Sbjct: 42623 cgaacgccgtgcggtcg 42607
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>dbj|AK108686.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-C04, full
            insert sequence
          Length = 1426

 Score =  113 bits (57), Expect = 5e-22
 Identities = 72/77 (93%)
 Strand = Plus / Minus

                                                                        
Query: 291  agaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtcccagaaca 350
            |||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||
Sbjct: 1088 agaggcggtcggcgatgacctggttggcagcgtcggaggtgtggtaggcgtcccagaaca 1029

                             
Query: 351  cgtacgccttgcggtcg 367
            || ||||| ||||||||
Sbjct: 1028 cgaacgccgtgcggtcg 1012
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  107 bits (54), Expect = 3e-20
 Identities = 69/74 (93%)
 Strand = Plus / Plus

                                                                           
Query: 291     agaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtcccagaaca 350
               |||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||
Sbjct: 3589577 agaggcggtcggcgatgacctggttggcggcgtcagaggtgtggtaggcgtcccagaaca 3589636

                             
Query: 351     cgtacgccttgcgg 364
               || ||||| |||||
Sbjct: 3589637 cgaacgccgtgcgg 3589650



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 239      gcgccggcgcgaggagccggag 260
                ||||||||||||||||||||||
Sbjct: 31107353 gcgccggcgcgaggagccggag 31107332



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 331      gtggtacgcgtcccagaacacgtac 355
                |||||||| ||||||||||||||||
Sbjct: 11035026 gtggtacgggtcccagaacacgtac 11035002
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  107 bits (54), Expect = 3e-20
 Identities = 69/74 (93%)
 Strand = Plus / Plus

                                                                           
Query: 291     agaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtcccagaaca 350
               |||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||
Sbjct: 3589688 agaggcggtcggcgatgacctggttggcggcgtcagaggtgtggtaggcgtcccagaaca 3589747

                             
Query: 351     cgtacgccttgcgg 364
               || ||||| |||||
Sbjct: 3589748 cgaacgccgtgcgg 3589761



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 239      gcgccggcgcgaggagccggag 260
                ||||||||||||||||||||||
Sbjct: 31197876 gcgccggcgcgaggagccggag 31197855



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 331      gtggtacgcgtcccagaacacgtac 355
                |||||||| ||||||||||||||||
Sbjct: 11031789 gtggtacgggtcccagaacacgtac 11031765
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>gb|AC107225.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0026H19,
              complete sequence
          Length = 150620

 Score =  107 bits (54), Expect = 3e-20
 Identities = 69/74 (93%)
 Strand = Plus / Plus

                                                                          
Query: 291    agaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtcccagaaca 350
              |||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||
Sbjct: 107230 agaggcggtcggcgatgacctggttggcggcgtcagaggtgtggtaggcgtcccagaaca 107289

                            
Query: 351    cgtacgccttgcgg 364
              || ||||| |||||
Sbjct: 107290 cgaacgccgtgcgg 107303
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>ref|NM_188691.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 717

 Score =  105 bits (53), Expect = 1e-19
 Identities = 71/77 (92%)
 Strand = Plus / Minus

                                                                       
Query: 291 agaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtcccagaaca 350
           |||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||
Sbjct: 571 agaggcggtcggcgatgacctggttggtggcgtcggaggtgtggtaggcgtcccagaaca 512

                            
Query: 351 cgtacgccttgcggtcg 367
           || ||| | ||||||||
Sbjct: 511 cgaacgtcgtgcggtcg 495
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  105 bits (53), Expect = 1e-19
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                           
Query: 291     agaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtcccagaaca 350
               |||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||
Sbjct: 7660192 agaggcggtcggcgatgacctggttggtggcgtcggaggtgtggtaggcgtcccagaaca 7660251

                                
Query: 351     cgtacgccttgcggtcg 367
               || ||| | ||||||||
Sbjct: 7660252 cgaacgtcgtgcggtcg 7660268
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>dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0086P08
          Length = 145312

 Score =  105 bits (53), Expect = 1e-19
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                         
Query: 291   agaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtcccagaaca 350
             |||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||
Sbjct: 70768 agaggcggtcggcgatgacctggttggtggcgtcggaggtgtggtaggcgtcccagaaca 70827

                              
Query: 351   cgtacgccttgcggtcg 367
             || ||| | ||||||||
Sbjct: 70828 cgaacgtcgtgcggtcg 70844
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>dbj|AK062747.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-F10, full
           insert sequence
          Length = 647

 Score =  105 bits (53), Expect = 1e-19
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                       
Query: 291 agaggcggtcggcgatgacccggttggcggcgtcggaggtgtggtacgcgtcccagaaca 350
           |||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||
Sbjct: 381 agaggcggtcggcgatgacctggttggtggcgtcggaggtgtggtaggcgtcccagaaca 440

                            
Query: 351 cgtacgccttgcggtcg 367
           || ||| | ||||||||
Sbjct: 441 cgaacgtcgtgcggtcg 457
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>ref|XM_483067.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1470

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                              
Query: 283 gccggcccagaggcggtcggcgatgacccggttggcggcgtcggaggtgtg 333
           |||| |||||||| |||||| ||||||||| ||||||||||||||| ||||
Sbjct: 907 gccgtcccagaggaggtcggtgatgacccgattggcggcgtcggagttgtg 957



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 311 cggttggcggcgtcggaggtg 331
           |||||||||||||||||||||
Sbjct: 854 cggttggcggcgtcggaggtg 874
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>ref|NM_102707.2| Arabidopsis thaliana carboxylic ester hydrolase/ hydrolase, acting on
            ester bonds AT1G29670 mRNA, complete cds
          Length = 1609

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 338  gcgtcccagaacacgtacgccttgcggtc 366
            |||||||||||||||||||| ||||||||
Sbjct: 1059 gcgtcccagaacacgtacgcattgcggtc 1031
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>ref|NM_102708.2| Arabidopsis thaliana unknown protein AT1G29680 mRNA, complete cds
          Length = 1127

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 338  gcgtcccagaacacgtacgccttgcggtc 366
            |||||||||||||||||||| ||||||||
Sbjct: 1036 gcgtcccagaacacgtacgcattgcggtc 1064
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>gb|AY065046.1| Arabidopsis thaliana At1g29670/F15D2_22 mRNA, complete cds
          Length = 1289

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 338  gcgtcccagaacacgtacgccttgcggtc 366
            |||||||||||||||||||| ||||||||
Sbjct: 1059 gcgtcccagaacacgtacgcattgcggtc 1031
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>emb|BX815677.1|CNS0AE1G Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS82ZH03 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1241

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 338  gcgtcccagaacacgtacgccttgcggtc 366
            |||||||||||||||||||| ||||||||
Sbjct: 1018 gcgtcccagaacacgtacgcattgcggtc 990
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>emb|BX816814.1|CNS0ABMA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH6ZB02 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1158

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 338 gcgtcccagaacacgtacgccttgcggtc 366
           |||||||||||||||||||| ||||||||
Sbjct: 967 gcgtcccagaacacgtacgcattgcggtc 939
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>gb|AC068667.6|AC068667 Arabidopsis thaliana chromosome 1 BAC F15D2 genomic sequence, complete
              sequence
          Length = 130653

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                           
Query: 338    gcgtcccagaacacgtacgccttgcggtc 366
              |||||||||||||||||||| ||||||||
Sbjct: 120035 gcgtcccagaacacgtacgcattgcggtc 120007
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>gb|AY086296.1| Arabidopsis thaliana clone 23556 mRNA, complete sequence
          Length = 1275

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 338  gcgtcccagaacacgtacgccttgcggtc 366
            |||||||||||||||||||| ||||||||
Sbjct: 1060 gcgtcccagaacacgtacgcattgcggtc 1032
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>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0525F01
          Length = 151668

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 313   gttggcggcgtcggaggtgtggtacgcgtcccagaacacgtac 355
             |||||||  ||||| || ||||||| |||||||||||||||||
Sbjct: 78102 gttggcgcggtcggtggggtggtactcgtcccagaacacgtac 78060
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>ref|XM_469846.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1362

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 239 gcgccggcgcgaggagccggag 260
           ||||||||||||||||||||||
Sbjct: 31  gcgccggcgcgaggagccggag 10
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>gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genomic sequence, complete
             sequence
          Length = 128017

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 239   gcgccggcgcgaggagccggag 260
             ||||||||||||||||||||||
Sbjct: 27994 gcgccggcgcgaggagccggag 27973
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 254     gccggagccggagagctggcgg 275
               ||||||||||||||||||||||
Sbjct: 3961554 gccggagccggagagctggcgg 3961533
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>dbj|AB099524.1| Oryza sativa (japonica cultivar-group) ORC5 mRNA for origin
           recognition complex 5, complete cds
          Length = 1362

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 239 gcgccggcgcgaggagccggag 260
           ||||||||||||||||||||||
Sbjct: 31  gcgccggcgcgaggagccggag 10
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>dbj|AK063449.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-F10, full
           insert sequence
          Length = 2080

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 239 gcgccggcgcgaggagccggag 260
           ||||||||||||||||||||||
Sbjct: 392 gcgccggcgcgaggagccggag 371
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>ref|NM_196893.1| Oryza sativa (japonica cultivar-group) putative early nodulin gene
            (Enod) related protein (OSJNBa0071K18.9), mRNA
          Length = 1384

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 331  gtggtacgcgtcccagaacacgtacgccttgcggtcg 367
            |||||| ||||||||||||||||| || | |||||||
Sbjct: 1019 gtggtaggcgtcccagaacacgtaggcgtcgcggtcg 983
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>gb|AF461424.2| Oryza sativa chromosome 3 clone OSJNBa0016B07, complete sequence
          Length = 167588

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 331   gtggtacgcgtcccagaacacgtac 355
             |||||||| ||||||||||||||||
Sbjct: 98096 gtggtacgggtcccagaacacgtac 98120
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>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete
              sequence
          Length = 149758

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                   
Query: 331    gtggtacgcgtcccagaacacgtacgccttgcggtcg 367
              |||||| ||||||||||||||||| || | |||||||
Sbjct: 102297 gtggtaggcgtcccagaacacgtaggcgtcgcggtcg 102333
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 331      gtggtacgcgtcccagaacacgtacgccttgcggtcg 367
                |||||| ||||||||||||||||| || | |||||||
Sbjct: 16557945 gtggtaggcgtcccagaacacgtaggcgtcgcggtcg 16557909
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>dbj|AK108201.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-C12, full
            insert sequence
          Length = 1375

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 331  gtggtacgcgtcccagaacacgtacgccttgcggtcg 367
            |||||| ||||||||||||||||| || | |||||||
Sbjct: 1031 gtggtaggcgtcccagaacacgtaggcgtcgcggtcg 995
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>dbj|AK060625.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-G08, full
            insert sequence
          Length = 1443

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 331  gtggtacgcgtcccagaacacgtac 355
            |||||||| ||||||||||||||||
Sbjct: 1188 gtggtacgggtcccagaacacgtac 1164
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>gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0042B10, from chromosome 3, complete sequence
          Length = 144205

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 331   gtggtacgcgtcccagaacacgtac 355
             |||||||| ||||||||||||||||
Sbjct: 78511 gtggtacgggtcccagaacacgtac 78487
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 331      gtggtacgcgtcccagaacacgtacgccttgcggtcg 367
                |||||| ||||||||||||||||| || | |||||||
Sbjct: 16566186 gtggtaggcgtcccagaacacgtaggcgtcgcggtcg 16566150
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>ref|NM_114900.2| Arabidopsis thaliana carboxylic ester hydrolase/ hydrolase, acting on
            ester bonds AT3G50400 mRNA, complete cds
          Length = 1290

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 332  tggtacgcgtcccagaacac 351
            ||||||||||||||||||||
Sbjct: 1057 tggtacgcgtcccagaacac 1038
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>ref|XM_323959.1| Neurospora crassa OR74A predicted protein (NCU04604.1) partial mRNA
          Length = 1647

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 247 gcgaggagccggagccggag 266
           ||||||||||||||||||||
Sbjct: 913 gcgaggagccggagccggag 932
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>ref|XM_953754.1| Neurospora crassa OR74A hypothetical protein (NCU04604.1) partial
           mRNA
          Length = 1647

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 247 gcgaggagccggagccggag 266
           ||||||||||||||||||||
Sbjct: 913 gcgaggagccggagccggag 932
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>ref|XM_546782.2| PREDICTED: Canis familiaris similar to Protein FAM38A (LOC489662),
           mRNA
          Length = 7861

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 396 ggcccccgaccttggtgtcc 415
           ||||||||||||||||||||
Sbjct: 438 ggcccccgaccttggtgtcc 457
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>gb|AC124969.12| Medicago truncatula clone mth2-15o15, complete sequence
          Length = 134863

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 24    accaatgtagtaccgattctcaaa 47
             |||||||||||| |||||||||||
Sbjct: 66388 accaatgtagtaacgattctcaaa 66365
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>gb|AF508154.1| Pseudomonas aeruginosa UDP-GlcNAc C6 dehydratase (wbpM) gene,
           complete cds
          Length = 1998

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 300 cggcgatgacccggttggcg 319
           ||||||||||||||||||||
Sbjct: 613 cggcgatgacccggttggcg 594
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>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16
          Length = 348642

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 225   cggctggccctggcgcgccggcgcgagg 252
             |||||||||| | |||||||||||||||
Sbjct: 95784 cggctggcccggccgcgccggcgcgagg 95757
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>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14
          Length = 346301

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 225    cggctggccctggcgcgccggcgcgagg 252
              |||||||||| | |||||||||||||||
Sbjct: 168821 cggctggcccggccgcgccggcgcgagg 168794
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>emb|BX294012.1|NC80A10 Neurospora crassa DNA linkage group V Cosmid contig 80A10
          Length = 161126

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 247    gcgaggagccggagccggag 266
              ||||||||||||||||||||
Sbjct: 146513 gcgaggagccggagccggag 146494
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>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29
          Length = 300800

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 300    cggcgatgacccggttggcg 319
              ||||||||||||||||||||
Sbjct: 219712 cggcgatgacccggttggcg 219693
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>emb|AL132976.2|ATF11C1 Arabidopsis thaliana DNA chromosome 3, BAC clone F11C1
          Length = 111122

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 332    tggtacgcgtcccagaacac 351
              ||||||||||||||||||||
Sbjct: 106716 tggtacgcgtcccagaacac 106697
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>gb|AF498420.1| Pseudomonas aeruginosa serotype 09 putative O-antigen biosynthesis gene
             cluster, partial sequence
          Length = 16349

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   cggcgatgacccggttggcg 319
             ||||||||||||||||||||
Sbjct: 16119 cggcgatgacccggttggcg 16100
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>gb|AF498417.1| Pseudomonas aeruginosa serotype 06 putative O-antigen biosynthesis gene
             cluster, partial sequence
          Length = 14734

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   cggcgatgacccggttggcg 319
             ||||||||||||||||||||
Sbjct: 14504 cggcgatgacccggttggcg 14485
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>gb|AF498416.1| Pseudomonas aeruginosa serotype 05 putative O-antigen biosynthesis gene
             cluster, partial sequence
          Length = 22381

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   cggcgatgacccggttggcg 319
             ||||||||||||||||||||
Sbjct: 22151 cggcgatgacccggttggcg 22132
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>gb|AF498415.1| Pseudomonas aeruginosa serotype 04 putative O-antigen biosynthesis gene
             cluster, partial sequence
          Length = 14364

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   cggcgatgacccggttggcg 319
             ||||||||||||||||||||
Sbjct: 14134 cggcgatgacccggttggcg 14115
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>gb|AF498414.1| Pseudomonas aeruginosa serotype 03 putative O-antigen biosynthesis gene
             cluster, partial sequence
          Length = 19295

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   cggcgatgacccggttggcg 319
             ||||||||||||||||||||
Sbjct: 19065 cggcgatgacccggttggcg 19046
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>gb|AF498413.1| Pseudomonas aeruginosa serotype 020 putative O-antigen biosynthesis
             gene cluster, partial sequence
          Length = 23952

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   cggcgatgacccggttggcg 319
             ||||||||||||||||||||
Sbjct: 23722 cggcgatgacccggttggcg 23703
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>gb|AF498412.1| Pseudomonas aeruginosa serotype 02 putative O-antigen biosynthesis gene
             cluster, partial sequence
          Length = 22388

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   cggcgatgacccggttggcg 319
             ||||||||||||||||||||
Sbjct: 22158 cggcgatgacccggttggcg 22139
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>gb|AF498411.1| Pseudomonas aeruginosa serotype 019 putative O-antigen biosynthesis
             gene cluster, partial sequence
          Length = 16720

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   cggcgatgacccggttggcg 319
             ||||||||||||||||||||
Sbjct: 16490 cggcgatgacccggttggcg 16471
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>gb|AF498408.1| Pseudomonas aeruginosa serotype 016 putative O-antigen biosynthesis
             gene cluster, partial sequence
          Length = 22368

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   cggcgatgacccggttggcg 319
             ||||||||||||||||||||
Sbjct: 22138 cggcgatgacccggttggcg 22119
to top
>gb|AF498407.1| Pseudomonas aeruginosa serotype 015 putative O-antigen biosynthesis
             gene cluster, partial sequence
          Length = 22913

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   cggcgatgacccggttggcg 319
             ||||||||||||||||||||
Sbjct: 22683 cggcgatgacccggttggcg 22664
to top
>gb|AF498405.1| Pseudomonas aeruginosa serotype 014 putative O-antigen biosynthesis
             gene cluster, partial sequence
          Length = 13413

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   cggcgatgacccggttggcg 319
             ||||||||||||||||||||
Sbjct: 13183 cggcgatgacccggttggcg 13164
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>gb|AF498404.1| Pseudomonas aeruginosa serotype 013 putative O-antigen biosynthesis
             gene cluster, partial sequence
          Length = 13401

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   cggcgatgacccggttggcg 319
             ||||||||||||||||||||
Sbjct: 13171 cggcgatgacccggttggcg 13152
to top
>gb|AF498403.1| Pseudomonas aeruginosa serotype 012 putative O-antigen biosynthesis
             gene cluster, partial sequence
          Length = 24949

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   cggcgatgacccggttggcg 319
             ||||||||||||||||||||
Sbjct: 24719 cggcgatgacccggttggcg 24700
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>gb|AF498402.1| Pseudomonas aeruginosa serotype 011 putative O-antigen biosynthesis
             gene cluster, partial sequence
          Length = 12953

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   cggcgatgacccggttggcg 319
             ||||||||||||||||||||
Sbjct: 12723 cggcgatgacccggttggcg 12704
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>gb|AF498401.1| Pseudomonas aeruginosa serotype 010 putative O-antigen biosynthesis
             gene cluster, partial sequence
          Length = 16720

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   cggcgatgacccggttggcg 319
             ||||||||||||||||||||
Sbjct: 16490 cggcgatgacccggttggcg 16471
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>gb|AF498400.1| Pseudomonas aeruginosa serotype 01 putative O-antigen biosynthesis gene
             cluster, partial sequence
          Length = 17453

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   cggcgatgacccggttggcg 319
             ||||||||||||||||||||
Sbjct: 17223 cggcgatgacccggttggcg 17204
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>gb|AC007527.6| Homo sapiens 12p12 BAC RPCI11-4N23 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 86692

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    atttatagaccaatgtagta 35
             ||||||||||||||||||||
Sbjct: 16525 atttatagaccaatgtagta 16506
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>gb|AC026443.4| Homo sapiens chromosome 5 clone CTD-2296H22, complete sequence
          Length = 118562

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 249   gaggagccggagccggagagctgg 272
             ||||||||| ||||||||||||||
Sbjct: 33416 gaggagccgcagccggagagctgg 33439
to top
>gb|AE004738.1| Pseudomonas aeruginosa PAO1, section 299 of 529 of the complete
            genome
          Length = 12555

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 300  cggcgatgacccggttggcg 319
            ||||||||||||||||||||
Sbjct: 3443 cggcgatgacccggttggcg 3462
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>gb|AF540991.1| Pseudomonas aeruginosa isolate 2-164 O-antigen biosynthetic locus,
             partial sequence
          Length = 14738

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   cggcgatgacccggttggcg 319
             ||||||||||||||||||||
Sbjct: 14505 cggcgatgacccggttggcg 14486
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>gb|AF540990.1| Pseudomonas aeruginosa isolate 1-60 O-antigen biosynthetic locus,
             partial sequence
          Length = 19104

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   cggcgatgacccggttggcg 319
             ||||||||||||||||||||
Sbjct: 18871 cggcgatgacccggttggcg 18852
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>dbj|AK117654.1| Arabidopsis thaliana At3g50400 mRNA for unknown protein, complete
            cds, clone: RAFL17-31-E14
          Length = 1292

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 332  tggtacgcgtcccagaacac 351
            ||||||||||||||||||||
Sbjct: 1059 tggtacgcgtcccagaacac 1040
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>gb|AF035937.1|AF035937 Pseudomonas aeruginosa strain IATS O6 RpsA (rpsA) gene, partial cds;
             Ihf-Beta, Wzz (wzz), and Wzx (wzx) genes, complete cds;
             and wbp gene cluster for O-antigen biosynthesis, complete
             sequence
          Length = 16736

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   cggcgatgacccggttggcg 319
             ||||||||||||||||||||
Sbjct: 15204 cggcgatgacccggttggcg 15185
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>emb|AJ328447.1|HSA328447 Homo sapiens genomic sequence surrounding NotI site, clone
           HSJ4-AO12RS
          Length = 751

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 243 cggcgcgaggagccggagccggag 266
           |||||||||| |||||||||||||
Sbjct: 230 cggcgcgaggggccggagccggag 253
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>gb|U50396.1|PAU50396 Pseudomonas aeruginosa Wzz (Rol) (wzz (rol)) gene, partial cds, WbpA
             (wbpB), WbpB (wbpB), WbpC (wbpC), WbpD (wbpD), WbpE
             (wbpE), Wzy (Rfc) (wzy (rfc)), Wzx (wzx), HisH (hisH),
             HisF (hisF), WbpG (wbpG), WbpH (wbpH), WbpI (wbpI), WbpJ
             (wbpJ), WbpK (wbpK), WbpL (wbpL), WbpM (wbpM) and WbpN
             (wbpN) genes, complete cds, and UvrB (uvrB) gene, partial
             cds
          Length = 24418

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   cggcgatgacccggttggcg 319
             ||||||||||||||||||||
Sbjct: 20291 cggcgatgacccggttggcg 20272


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,565,382
Number of Sequences: 3902068
Number of extensions: 2565382
Number of successful extensions: 51685
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51083
Number of HSP's gapped (non-prelim): 602
length of query: 421
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 399
effective length of database: 17,147,199,772
effective search space: 6841732709028
effective search space used: 6841732709028
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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