ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart08g03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY329320.1| Pleospora sp. P342 vacuolar membrane ATPase catal... 40 1.1
2gb|AY329273.1| Pleospora sp. P56 vacuolar membrane ATPase cataly... 40 1.1
3gb|AY515512.1| SARS coronavirus HC/SZ/61/03, complete genome 38 4.3
4gb|AY714217.1| SARS Coronavirus CDC#200301157, complete genome 38 4.3
5gb|AY559097.1| SARS coronavirus Sin3408L, complete genome 38 4.3
6gb|AY559096.1| SARS coronavirus Sin850, complete genome 38 4.3
7gb|AY559095.1| SARS coronavirus Sin847, complete genome 38 4.3
8gb|AY559094.1| SARS coronavirus Sin846, complete genome 38 4.3
9gb|AY559093.1| SARS coronavirus Sin845, complete genome 38 4.3
10gb|AY559092.1| SARS coronavirus SinP5, complete genome 38 4.3
11gb|AY559091.1| SARS coronavirus SinP4, complete genome 38 4.3
12gb|AY559090.1| SARS coronavirus SinP3, complete genome 38 4.3
13gb|AY559089.1| SARS coronavirus SinP2, complete genome 38 4.3
14gb|AY559088.1| SARS coronavirus SinP1, complete genome 38 4.3
15gb|AY559087.1| SARS coronavirus Sin3725V, complete genome 38 4.3
16gb|AY559086.1| SARS coronavirus Sin849, complete genome 38 4.3
17gb|AY559085.1| SARS coronavirus Sin848, complete genome 38 4.3
18gb|AY559084.1| SARS coronavirus Sin3765V, complete genome 38 4.3
19gb|AY559083.1| SARS coronavirus Sin3408, complete genome 38 4.3
20gb|AY559082.1| SARS coronavirus Sin852, complete genome 38 4.3
21gb|AY559081.1| SARS coronavirus Sin842, complete genome 38 4.3
22gb|AY278741.1| SARS coronavirus Urbani, complete genome 38 4.3
23gb|AY595412.1| SARS coronavirus LLJ-2004, complete genome 38 4.3
24gb|DQ182595.1| SARS coronavirus ZJ0301 from China, complete genome 38 4.3
25gb|AY274119.3| SARS coronavirus TOR2, complete genome 38 4.3
26gb|AY323977.2| SARS coronavirus HSR 1, complete genome 38 4.3
27gb|AY534762.1|AY534762S1 SARS coronavirus Sin_WNV, partial seque... 38 4.3
28gb|AY534758.1|AY534758S1 SARS coronavirus Sin0409, partial seque... 38 4.3
29gb|AY291315.1| SARS coronavirus Frankfurt 1, complete genome 38 4.3
30gb|U29613.1| Caenorhabditis elegans cosmid K02A6, complete sequence 38 4.3
31gb|AY291451.1| SARS coronavirus TW1, complete genome 38 4.3
32gb|AY502932.1| SARS coronavirus TW9, complete genome 38 4.3
33gb|AY502931.1| SARS coronavirus TW8, complete genome 38 4.3
34gb|AY502930.1| SARS coronavirus TW7, complete genome 38 4.3
35gb|AY502929.1| SARS coronavirus TW6, complete genome 38 4.3
36gb|AY502928.1| SARS coronavirus TW5, complete genome 38 4.3
37gb|AY502927.1| SARS coronavirus TW4, complete genome 38 4.3
38gb|AY502926.1| SARS coronavirus TW3, complete genome 38 4.3
39gb|AY502925.1| SARS coronavirus TW2, complete genome 38 4.3
40gb|AY502924.1| SARS coronavirus TW11, complete genome 38 4.3
41gb|AY502923.1| SARS coronavirus TW10, complete genome 38 4.3
42gb|AY286320.4| SARS coronavirus ZJ01, partial genome 38 4.3
43gb|AY390556.1| SARS coronavirus GZ02, complete genome 38 4.3
44gb|AY395004.1| SARS coronavirus HZS2-Bb, partial genome 38 4.3
45gb|AY395003.1| SARS coronavirus ZS-C, complete genome 38 4.3
46gb|AY395002.1| SARS coronavirus LC5, complete genome 38 4.3
47gb|AY395001.1| SARS coronavirus LC4, complete genome 38 4.3
48gb|AY395000.1| SARS coronavirus LC3, complete genome 38 4.3
49gb|AY394999.1| SARS coronavirus LC2, complete genome 38 4.3
50gb|AY394998.1| SARS coronavirus LC1, complete genome 38 4.3
51gb|AY394997.1| SARS coronavirus ZS-A, complete genome 38 4.3
52gb|AY394996.1| SARS coronavirus ZS-B, complete genome 38 4.3
53gb|AY394995.1| SARS coronavirus HSZ-Cc, complete genome 38 4.3
54gb|AY394994.1| SARS coronavirus HSZ-Bc, complete genome 38 4.3
55gb|AY394993.1| SARS coronavirus HGZ8L2, complete genome 38 4.3
56gb|AY394992.1| SARS coronavirus HZS2-C, complete genome 38 4.3
57gb|AY394991.1| SARS coronavirus HZS2-Fc, complete genome 38 4.3
58gb|AY394990.1| SARS coronavirus HZS2-E, complete genome 38 4.3
59gb|AY394989.1| SARS coronavirus HZS2-D, complete genome 38 4.3
60gb|AY394988.1| SARS coronavirus JMD, partial genome 38 4.3
61gb|AY394987.1| SARS coronavirus HZS2-Fb, complete genome 38 4.3
62gb|AY394986.1| SARS coronavirus HSZ-Cb, complete genome 38 4.3
63gb|AY394985.1| SARS coronavirus HSZ-Bb, complete genome 38 4.3
64gb|AY394983.1| SARS coronavirus HSZ2-A, complete genome 38 4.3
65gb|AY394982.1| SARS coronavirus HGZ8L1-B, partial genome 38 4.3
66gb|AY394981.1| SARS coronavirus HGZ8L1-A, partial genome 38 4.3
67gb|AY394980.1| SARS coronavirus GZ-D, partial genome 38 4.3
68gb|AY394979.1| SARS coronavirus GZ-C, complete genome 38 4.3
69gb|AY394978.1| SARS coronavirus GZ-B, complete genome 38 4.3
70gb|AY394977.1| SARS coronavirus GZ-A, partial genome 38 4.3
71gb|AY508724.1| SARS coronavirus NS-1, complete genome 38 4.3
72gb|AY310120.1| SARS coronavirus FRA, complete genome 38 4.3
73emb|BX957337.7| Zebrafish DNA sequence from clone DKEY-211E8 in ... 38 4.3
74gb|AY345988.1| SARS coronavirus CUHK-AG03, complete genome 38 4.3
75gb|AY345987.1| SARS coronavirus CUHK-AG02, complete genome 38 4.3
76gb|AY345986.1| SARS coronavirus CUHK-AG01, complete genome 38 4.3
77gb|AY461660.1| SARS coronavirus SoD, complete genome 38 4.3
78gb|AY282752.2| SARS coronavirus CUHK-Su10, complete genome 38 4.3
79gb|AY357076.1| SARS coronavirus PUMC03, complete genome 38 4.3
80gb|AY357075.1| SARS coronavirus PUMC02, complete genome 38 4.3
81gb|AY350750.1| SARS coronavirus PUMC01, complete genome 38 4.3
82gb|AY304495.1| SARS coronavirus GZ50, complete genome 38 4.3
83gb|AY304488.1| SARS coronavirus SZ16, complete genome 38 4.3
84gb|AY304486.1| SARS coronavirus SZ3, complete genome 38 4.3
85gb|AY427439.1| SARS coronavirus AS, complete genome 38 4.3
86gb|AY283798.2| SARS coronavirus Sin2774, complete genome 38 4.3
87gb|AY278491.2| SARS coronavirus HKU-39849, complete genome 38 4.3
88gb|AY278489.2| SARS coronavirus GD01, complete genome 38 4.3
89gb|AY362699.1| SARS coronavirus TWC3, complete genome 38 4.3
90gb|AY362698.1| SARS coronavirus TWC2, complete genome 38 4.3
91gb|AY283794.1| SARS coronavirus Sin2500, complete genome 38 4.3
92gb|AY283795.1| SARS coronavirus Sin2677, complete genome 38 4.3
93gb|AY283796.1| SARS coronavirus Sin2679, complete genome 38 4.3
94gb|AY283797.1| SARS coronavirus Sin2748, complete genome 38 4.3
95gb|AY351680.1| SARS coronavirus ZMY 1, complete genome 38 4.3
96gb|AY278554.2| SARS coronavirus CUHK-W1, complete genome 38 4.3
97gb|AY322205.1|AY322205S1 SARS coronavirus Shanhgai LY orf1ab pol... 38 4.3
98gb|AY321118.1| SARS coronavirus TWC, complete genome 38 4.3
99gb|AY279354.2| SARS coronavirus BJ04, complete genome 38 4.3
100gb|AY278490.3| SARS coronavirus BJ03, complete genome 38 4.3
101gb|AY278487.3| SARS coronavirus BJ02, complete genome 38 4.3
102gb|AY297028.1| SARS coronavirus ZJ01, complete genome 38 4.3
103gb|AY686863.1| SARS coronavirus A022, complete genome 38 4.3
104gb|AY686864.1| SARS coronavirus B039, complete genome 38 4.3
105gb|AC103584.15| Bos taurus clone rp42-51p13, complete sequence 38 4.3
106gb|AY278488.2| SARS coronavirus BJ01, complete genome 38 4.3
107gb|AY394850.2| SARS coronavirus WHU, complete genome 38 4.3
108gb|AC084525.1|CBRG21D12 Caenorhabditis briggsae cosmid G21D12, c... 38 4.3
109gb|AY338175.1| SARS coronavirus Taiwan TC2, complete genome 38 4.3
110gb|AY338174.1| SARS coronavirus Taiwan TC1, complete genome 38 4.3
111gb|AY348314.1| SARS coronavirus Taiwan TC3, complete genome 38 4.3
112gb|DQ071615.1| Bat SARS coronavirus Rp3, complete genome 38 4.3
113gb|AY654624.1| SARS coronavirus TJF, complete genome 38 4.3
114gb|AY772062.1| SARS coronavirus WH20, complete genome 38 4.3
115gb|AY545919.1| SARS coronavirus isolate CFB/SZ/94/03, complete g... 38 4.3
116gb|AY545918.1| SARS coronavirus isolate HC/GZ/32/03, complete ge... 38 4.3
117gb|AY545917.1| SARS coronavirus isolate HC/GZ/81/03, complete ge... 38 4.3
118gb|AY545916.1| SARS coronavirus isolate HC/SZ/266/03, complete g... 38 4.3
119gb|AY545915.1| SARS coronavirus isolate HC/SZ/DM1/03, complete g... 38 4.3
120gb|AY545914.1| SARS coronavirus isolate HC/SZ/79/03, complete ge... 38 4.3
121gb|AY568539.1| SARS coronavirus GZ0401, complete genome 38 4.3
122gb|AY313906.1| SARS coronavirus GD69, complete genome 38 4.3
123gb|AY613950.1| SARS coronavirus PC4-227, complete genome 38 4.3
124gb|AY613949.1| SARS coronavirus PC4-136, complete genome 38 4.3
125gb|AY613948.1| SARS coronavirus PC4-13, complete genome 38 4.3
126gb|AY613947.1| SARS coronavirus GZ0402, complete genome 38 4.3
127dbj|AP006561.1| SARS coronavirus TWY genomic RNA, complete genome 38 4.3
128dbj|AP006560.1| SARS coronavirus TWS genomic RNA, complete genome 38 4.3
129dbj|AP006559.1| SARS coronavirus TWK genomic RNA, complete genome 38 4.3
130dbj|AP006558.1| SARS coronavirus TWJ genomic RNA, complete genome 38 4.3
131dbj|AP006557.1| SARS coronavirus TWH genomic RNA, complete genome 38 4.3
132dbj|AP006699.1| Lotus japonicus genomic DNA, chromosome 2, clone... 38 4.3
133dbj|AP006696.1| Lotus japonicus genomic DNA, chromosome 3, clone... 38 4.3
134gb|AY572038.1| SARS coronavirus civet020, complete genome 38 4.3
135gb|AY572035.1| SARS coronavirus civet010, complete genome 38 4.3
136gb|AY572034.1| SARS coronavirus civet007, complete genome 38 4.3
137dbj|AP004476.1| Lotus japonicus genomic DNA, chromosome 1, clone... 38 4.3
138gb|AY485278.1| SARS coronavirus Sino3-11, complete genome 38 4.3
139gb|AY485277.1| SARS coronavirus Sino1-11, complete genome 38 4.3
140dbj|AB257344.1| SARS coronavirus Frankfurt 1 genomic RNA, nearly... 38 4.3 
>gb|AY329320.1| Pleospora sp. P342 vacuolar membrane ATPase catalytic subunit A
           (vmaA) gene, partial cds; and vmaA-vpsA intergenic
           spacer, partial sequence
          Length = 675

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 59  caacaatggttttgaaagattggt 82
           |||||||||||||||||| |||||
Sbjct: 206 caacaatggttttgaaagcttggt 183
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>gb|AY329273.1| Pleospora sp. P56 vacuolar membrane ATPase catalytic subunit A
           (vmaA) gene, partial cds; and vmaA-vpsA intergenic
           spacer, partial sequence
          Length = 675

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 59  caacaatggttttgaaagattggt 82
           |||||||||||||||||| |||||
Sbjct: 206 caacaatggttttgaaagcttggt 183
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>gb|AY515512.1| SARS coronavirus HC/SZ/61/03, complete genome
          Length = 29731

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1751 caacaatggttttgaaaga 1733
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>gb|AY714217.1| SARS Coronavirus CDC#200301157, complete genome
          Length = 29727

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
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>gb|AY559097.1| SARS coronavirus Sin3408L, complete genome
          Length = 29715

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1758 caacaatggttttgaaaga 1740
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>gb|AY559096.1| SARS coronavirus Sin850, complete genome
          Length = 29720

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1766 caacaatggttttgaaaga 1748
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>gb|AY559095.1| SARS coronavirus Sin847, complete genome
          Length = 29719

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1764 caacaatggttttgaaaga 1746
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>gb|AY559094.1| SARS coronavirus Sin846, complete genome
          Length = 29577

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1758 caacaatggttttgaaaga 1740
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>gb|AY559093.1| SARS coronavirus Sin845, complete genome
          Length = 29712

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1758 caacaatggttttgaaaga 1740
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>gb|AY559092.1| SARS coronavirus SinP5, complete genome
          Length = 29713

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1758 caacaatggttttgaaaga 1740
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>gb|AY559091.1| SARS coronavirus SinP4, complete genome
          Length = 29710

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1758 caacaatggttttgaaaga 1740
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>gb|AY559090.1| SARS coronavirus SinP3, complete genome
          Length = 29725

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1760 caacaatggttttgaaaga 1742
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>gb|AY559089.1| SARS coronavirus SinP2, complete genome
          Length = 29717

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1758 caacaatggttttgaaaga 1740
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>gb|AY559088.1| SARS coronavirus SinP1, complete genome
          Length = 29714

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1758 caacaatggttttgaaaga 1740
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>gb|AY559087.1| SARS coronavirus Sin3725V, complete genome
          Length = 29716

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1758 caacaatggttttgaaaga 1740
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>gb|AY559086.1| SARS coronavirus Sin849, complete genome
          Length = 29661

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1758 caacaatggttttgaaaga 1740
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>gb|AY559085.1| SARS coronavirus Sin848, complete genome
          Length = 29713

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1758 caacaatggttttgaaaga 1740
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>gb|AY559084.1| SARS coronavirus Sin3765V, complete genome
          Length = 29722

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1758 caacaatggttttgaaaga 1740
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>gb|AY559083.1| SARS coronavirus Sin3408, complete genome
          Length = 29767

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1808 caacaatggttttgaaaga 1790
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>gb|AY559082.1| SARS coronavirus Sin852, complete genome
          Length = 29670

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1773 caacaatggttttgaaaga 1755
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>gb|AY559081.1| SARS coronavirus Sin842, complete genome
          Length = 29716

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1761 caacaatggttttgaaaga 1743
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>gb|AY278741.1| SARS coronavirus Urbani, complete genome
          Length = 29727

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
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>gb|AY595412.1| SARS coronavirus LLJ-2004, complete genome
          Length = 29716

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1753 caacaatggttttgaaaga 1735
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>gb|DQ182595.1| SARS coronavirus ZJ0301 from China, complete genome
          Length = 29706

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1758 caacaatggttttgaaaga 1740
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>gb|AY274119.3| SARS coronavirus TOR2, complete genome
          Length = 29751

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
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>gb|AY323977.2| SARS coronavirus HSR 1, complete genome
          Length = 29751

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
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>gb|AY534762.1|AY534762S1 SARS coronavirus Sin_WNV, partial sequence.~~
          Length = 6200

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 59  caacaatggttttgaaaga 77
           |||||||||||||||||||
Sbjct: 895 caacaatggttttgaaaga 877
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>gb|AY534758.1|AY534758S1 SARS coronavirus Sin0409, partial sequence.~~
          Length = 14011

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1229 caacaatggttttgaaaga 1211
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>gb|AY291315.1| SARS coronavirus Frankfurt 1, complete genome
          Length = 29727

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
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>gb|U29613.1| Caenorhabditis elegans cosmid K02A6, complete sequence
          Length = 14303

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 57   aacaacaatggttttgaaa 75
            |||||||||||||||||||
Sbjct: 7862 aacaacaatggttttgaaa 7844
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>gb|AY291451.1| SARS coronavirus TW1, complete genome
          Length = 29729

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
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>gb|AY502932.1| SARS coronavirus TW9, complete genome
          Length = 29729

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
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>gb|AY502931.1| SARS coronavirus TW8, complete genome
          Length = 29729

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
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>gb|AY502930.1| SARS coronavirus TW7, complete genome
          Length = 29729

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
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>gb|AY502929.1| SARS coronavirus TW6, complete genome
          Length = 29729

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
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>gb|AY502928.1| SARS coronavirus TW5, complete genome
          Length = 29729

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
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>gb|AY502927.1| SARS coronavirus TW4, complete genome
          Length = 29729

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
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>gb|AY502926.1| SARS coronavirus TW3, complete genome
          Length = 29729

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
to top
>gb|AY502925.1| SARS coronavirus TW2, complete genome
          Length = 29729

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
to top
>gb|AY502924.1| SARS coronavirus TW11, complete genome
          Length = 29727

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
to top
>gb|AY502923.1| SARS coronavirus TW10, complete genome
          Length = 29729

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
to top
>gb|AY286320.4| SARS coronavirus ZJ01, partial genome
          Length = 26333

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1758 caacaatggttttgaaaga 1740
to top
>gb|AY390556.1| SARS coronavirus GZ02, complete genome
          Length = 29760

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
to top
>gb|AY395004.1| SARS coronavirus HZS2-Bb, partial genome
          Length = 29620

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1727 caacaatggttttgaaaga 1709
to top
>gb|AY395003.1| SARS coronavirus ZS-C, complete genome
          Length = 29647

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1723 caacaatggttttgaaaga 1705
to top
>gb|AY395002.1| SARS coronavirus LC5, complete genome
          Length = 29350

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1759 caacaatggttttgaaaga 1741
to top
>gb|AY395001.1| SARS coronavirus LC4, complete genome
          Length = 29350

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1759 caacaatggttttgaaaga 1741
to top
>gb|AY395000.1| SARS coronavirus LC3, complete genome
          Length = 29350

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1759 caacaatggttttgaaaga 1741
to top
>gb|AY394999.1| SARS coronavirus LC2, complete genome
          Length = 29350

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1759 caacaatggttttgaaaga 1741
to top
>gb|AY394998.1| SARS coronavirus LC1, complete genome
          Length = 29736

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1759 caacaatggttttgaaaga 1741
to top
>gb|AY394997.1| SARS coronavirus ZS-A, complete genome
          Length = 29683

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1759 caacaatggttttgaaaga 1741
to top
>gb|AY394996.1| SARS coronavirus ZS-B, complete genome
          Length = 29683

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1759 caacaatggttttgaaaga 1741
to top
>gb|AY394995.1| SARS coronavirus HSZ-Cc, complete genome
          Length = 29765

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1759 caacaatggttttgaaaga 1741
to top
>gb|AY394994.1| SARS coronavirus HSZ-Bc, complete genome
          Length = 29765

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1759 caacaatggttttgaaaga 1741
to top
>gb|AY394993.1| SARS coronavirus HGZ8L2, complete genome
          Length = 29736

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1759 caacaatggttttgaaaga 1741
to top
>gb|AY394992.1| SARS coronavirus HZS2-C, complete genome
          Length = 29736

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1759 caacaatggttttgaaaga 1741
to top
>gb|AY394991.1| SARS coronavirus HZS2-Fc, complete genome
          Length = 29736

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1759 caacaatggttttgaaaga 1741
to top
>gb|AY394990.1| SARS coronavirus HZS2-E, complete genome
          Length = 29736

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1759 caacaatggttttgaaaga 1741
to top
>gb|AY394989.1| SARS coronavirus HZS2-D, complete genome
          Length = 29736

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1759 caacaatggttttgaaaga 1741
to top
>gb|AY394988.1| SARS coronavirus JMD, partial genome
          Length = 29665

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1688 caacaatggttttgaaaga 1670
to top
>gb|AY394987.1| SARS coronavirus HZS2-Fb, complete genome
          Length = 29709

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1732 caacaatggttttgaaaga 1714
to top
>gb|AY394986.1| SARS coronavirus HSZ-Cb, complete genome
          Length = 29729

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1723 caacaatggttttgaaaga 1705
to top
>gb|AY394985.1| SARS coronavirus HSZ-Bb, complete genome
          Length = 29530

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1524 caacaatggttttgaaaga 1506
to top
>gb|AY394983.1| SARS coronavirus HSZ2-A, complete genome
          Length = 29699

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1722 caacaatggttttgaaaga 1704
to top
>gb|AY394982.1| SARS coronavirus HGZ8L1-B, partial genome
          Length = 29646

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1722 caacaatggttttgaaaga 1704
to top
>gb|AY394981.1| SARS coronavirus HGZ8L1-A, partial genome
          Length = 29726

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1723 caacaatggttttgaaaga 1705
to top
>gb|AY394980.1| SARS coronavirus GZ-D, partial genome
          Length = 29705

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1728 caacaatggttttgaaaga 1710
to top
>gb|AY394979.1| SARS coronavirus GZ-C, complete genome
          Length = 29645

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1722 caacaatggttttgaaaga 1704
to top
>gb|AY394978.1| SARS coronavirus GZ-B, complete genome
          Length = 29640

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1702 caacaatggttttgaaaga 1684
to top
>gb|AY394977.1| SARS coronavirus GZ-A, partial genome
          Length = 29433

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1723 caacaatggttttgaaaga 1705
to top
>gb|AY508724.1| SARS coronavirus NS-1, complete genome
          Length = 29732

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1758 caacaatggttttgaaaga 1740
to top
>gb|AY310120.1| SARS coronavirus FRA, complete genome
          Length = 29740

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
to top
>emb|BX957337.7| Zebrafish DNA sequence from clone DKEY-211E8 in linkage group 6, complete
              sequence
          Length = 186218

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 72     gaaagattggtcccacttt 90
              |||||||||||||||||||
Sbjct: 182031 gaaagattggtcccacttt 182013
to top
>gb|AY345988.1| SARS coronavirus CUHK-AG03, complete genome
          Length = 29736

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1759 caacaatggttttgaaaga 1741
to top
>gb|AY345987.1| SARS coronavirus CUHK-AG02, complete genome
          Length = 29736

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1759 caacaatggttttgaaaga 1741
to top
>gb|AY345986.1| SARS coronavirus CUHK-AG01, complete genome
          Length = 29736

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1759 caacaatggttttgaaaga 1741
to top
>gb|AY461660.1| SARS coronavirus SoD, complete genome
          Length = 29715

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1759 caacaatggttttgaaaga 1741
to top
>gb|AY282752.2| SARS coronavirus CUHK-Su10, complete genome
          Length = 29736

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1759 caacaatggttttgaaaga 1741
to top
>gb|AY357076.1| SARS coronavirus PUMC03, complete genome
          Length = 29745

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1760 caacaatggttttgaaaga 1742
to top
>gb|AY357075.1| SARS coronavirus PUMC02, complete genome
          Length = 29738

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1760 caacaatggttttgaaaga 1742
to top
>gb|AY350750.1| SARS coronavirus PUMC01, complete genome
          Length = 29738

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1761 caacaatggttttgaaaga 1743
to top
>gb|AY304495.1| SARS coronavirus GZ50, complete genome
          Length = 29720

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1759 caacaatggttttgaaaga 1741
to top
>gb|AY304488.1| SARS coronavirus SZ16, complete genome
          Length = 29731

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1759 caacaatggttttgaaaga 1741
to top
>gb|AY304486.1| SARS coronavirus SZ3, complete genome
          Length = 29741

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1759 caacaatggttttgaaaga 1741
to top
>gb|AY427439.1| SARS coronavirus AS, complete genome
          Length = 29711

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1758 caacaatggttttgaaaga 1740
to top
>gb|AY283798.2| SARS coronavirus Sin2774, complete genome
          Length = 29711

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1758 caacaatggttttgaaaga 1740
to top
>gb|AY278491.2| SARS coronavirus HKU-39849, complete genome
          Length = 29742

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
to top
>gb|AY278489.2| SARS coronavirus GD01, complete genome
          Length = 29757

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1758 caacaatggttttgaaaga 1740
to top
>gb|AY362699.1| SARS coronavirus TWC3, complete genome
          Length = 29727

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
to top
>gb|AY362698.1| SARS coronavirus TWC2, complete genome
          Length = 29727

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
to top
>gb|AY283794.1| SARS coronavirus Sin2500, complete genome
          Length = 29711

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1758 caacaatggttttgaaaga 1740
to top
>gb|AY283795.1| SARS coronavirus Sin2677, complete genome
          Length = 29705

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1758 caacaatggttttgaaaga 1740
to top
>gb|AY283796.1| SARS coronavirus Sin2679, complete genome
          Length = 29711

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1758 caacaatggttttgaaaga 1740
to top
>gb|AY283797.1| SARS coronavirus Sin2748, complete genome
          Length = 29706

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1758 caacaatggttttgaaaga 1740
to top
>gb|AY351680.1| SARS coronavirus ZMY 1, complete genome
          Length = 29749

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1777 caacaatggttttgaaaga 1759
to top
>gb|AY278554.2| SARS coronavirus CUHK-W1, complete genome
          Length = 29736

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1759 caacaatggttttgaaaga 1741
to top
>gb|AY322205.1|AY322205S1 SARS coronavirus Shanhgai LY orf1ab polyprotein and orf1a polyprotein
            genes, partial cds
          Length = 1706

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1695 caacaatggttttgaaaga 1677
to top
>gb|AY321118.1| SARS coronavirus TWC, complete genome
          Length = 29725

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
to top
>gb|AY279354.2| SARS coronavirus BJ04, complete genome
          Length = 29732

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1758 caacaatggttttgaaaga 1740
to top
>gb|AY278490.3| SARS coronavirus BJ03, complete genome
          Length = 29740

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1770 caacaatggttttgaaaga 1752
to top
>gb|AY278487.3| SARS coronavirus BJ02, complete genome
          Length = 29745

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
to top
>gb|AY297028.1| SARS coronavirus ZJ01, complete genome
          Length = 29715

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1760 caacaatggttttgaaaga 1742
to top
>gb|AY686863.1| SARS coronavirus A022, complete genome
          Length = 29499

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1723 caacaatggttttgaaaga 1705
to top
>gb|AY686864.1| SARS coronavirus B039, complete genome
          Length = 29525

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1733 caacaatggttttgaaaga 1715
to top
>gb|AC103584.15| Bos taurus clone rp42-51p13, complete sequence
          Length = 177017

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 63     aatggttttgaaagattgg 81
              |||||||||||||||||||
Sbjct: 137101 aatggttttgaaagattgg 137083
to top
>gb|AY278488.2| SARS coronavirus BJ01, complete genome
          Length = 29725

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1755 caacaatggttttgaaaga 1737
to top
>gb|AY394850.2| SARS coronavirus WHU, complete genome
          Length = 29728

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
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>gb|AC084525.1|CBRG21D12 Caenorhabditis briggsae cosmid G21D12, complete sequence
          Length = 38569

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 60    aacaatggttttgaaagat 78
             |||||||||||||||||||
Sbjct: 19102 aacaatggttttgaaagat 19084
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>gb|AY338175.1| SARS coronavirus Taiwan TC2, complete genome
          Length = 29573

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1705 caacaatggttttgaaaga 1687
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>gb|AY338174.1| SARS coronavirus Taiwan TC1, complete genome
          Length = 29573

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1705 caacaatggttttgaaaga 1687
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>gb|AY348314.1| SARS coronavirus Taiwan TC3, complete genome
          Length = 29573

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1705 caacaatggttttgaaaga 1687
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>gb|DQ071615.1| Bat SARS coronavirus Rp3, complete genome
          Length = 29736

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
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>gb|AY654624.1| SARS coronavirus TJF, complete genome
          Length = 29745

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1773 caacaatggttttgaaaga 1755
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>gb|AY772062.1| SARS coronavirus WH20, complete genome
          Length = 29461

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1784 caacaatggttttgaaaga 1766
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>gb|AY545919.1| SARS coronavirus isolate CFB/SZ/94/03, complete genome
          Length = 29739

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1753 caacaatggttttgaaaga 1735
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>gb|AY545918.1| SARS coronavirus isolate HC/GZ/32/03, complete genome
          Length = 29737

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1740 caacaatggttttgaaaga 1722
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>gb|AY545917.1| SARS coronavirus isolate HC/GZ/81/03, complete genome
          Length = 29739

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1738 caacaatggttttgaaaga 1720
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>gb|AY545916.1| SARS coronavirus isolate HC/SZ/266/03, complete genome
          Length = 29721

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1740 caacaatggttttgaaaga 1722
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>gb|AY545915.1| SARS coronavirus isolate HC/SZ/DM1/03, complete genome
          Length = 29714

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1742 caacaatggttttgaaaga 1724
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>gb|AY545914.1| SARS coronavirus isolate HC/SZ/79/03, complete genome
          Length = 29723

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1751 caacaatggttttgaaaga 1733
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>gb|AY568539.1| SARS coronavirus GZ0401, complete genome
          Length = 29730

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1724 caacaatggttttgaaaga 1706
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>gb|AY313906.1| SARS coronavirus GD69, complete genome
          Length = 29754

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
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>gb|AY613950.1| SARS coronavirus PC4-227, complete genome
          Length = 29728

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1724 caacaatggttttgaaaga 1706
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>gb|AY613949.1| SARS coronavirus PC4-136, complete genome
          Length = 29730

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1724 caacaatggttttgaaaga 1706
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>gb|AY613948.1| SARS coronavirus PC4-13, complete genome
          Length = 29730

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1724 caacaatggttttgaaaga 1706
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>gb|AY613947.1| SARS coronavirus GZ0402, complete genome
          Length = 29730

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1724 caacaatggttttgaaaga 1706
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>dbj|AP006561.1| SARS coronavirus TWY genomic RNA, complete genome
          Length = 29727

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
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>dbj|AP006560.1| SARS coronavirus TWS genomic RNA, complete genome
          Length = 29727

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
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>dbj|AP006559.1| SARS coronavirus TWK genomic RNA, complete genome
          Length = 29727

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
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>dbj|AP006558.1| SARS coronavirus TWJ genomic RNA, complete genome
          Length = 29725

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
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>dbj|AP006557.1| SARS coronavirus TWH genomic RNA, complete genome
          Length = 29727

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
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>dbj|AP006699.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01N23, TM0490,
             complete sequence
          Length = 110636

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 57    aacaacaatggttttgaaa 75
             |||||||||||||||||||
Sbjct: 95202 aacaacaatggttttgaaa 95220
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>dbj|AP006696.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT17N21, TM0403,
             complete sequence
          Length = 97807

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 57    aacaacaatggttttgaaa 75
             |||||||||||||||||||
Sbjct: 65348 aacaacaatggttttgaaa 65366
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>gb|AY572038.1| SARS coronavirus civet020, complete genome
          Length = 29683

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1703 caacaatggttttgaaaga 1685
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>gb|AY572035.1| SARS coronavirus civet010, complete genome
          Length = 29518

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1726 caacaatggttttgaaaga 1708
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>gb|AY572034.1| SARS coronavirus civet007, complete genome
          Length = 29540

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1748 caacaatggttttgaaaga 1730
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>dbj|AP004476.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT12K07, TM0011a,
            complete sequence
          Length = 33705

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 57   aacaacaatggttttgaaa 75
            |||||||||||||||||||
Sbjct: 1961 aacaacaatggttttgaaa 1943
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>gb|AY485278.1| SARS coronavirus Sino3-11, complete genome
          Length = 29740

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
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>gb|AY485277.1| SARS coronavirus Sino1-11, complete genome
          Length = 29741

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1774 caacaatggttttgaaaga 1756
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>dbj|AB257344.1| SARS coronavirus Frankfurt 1 genomic RNA, nearly complete genome,
            clone: persistent virus #21
          Length = 29632

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 59   caacaatggttttgaaaga 77
            |||||||||||||||||||
Sbjct: 1733 caacaatggttttgaaaga 1715


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 694,605
Number of Sequences: 3902068
Number of extensions: 694605
Number of successful extensions: 45083
Number of sequences better than 10.0: 140
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44940
Number of HSP's gapped (non-prelim): 143
length of query: 97
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 76
effective length of database: 17,151,101,840
effective search space: 1303483739840
effective search space used: 1303483739840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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