ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart08g02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC122485.3| Mus musculus BAC clone RP24-377J10 from chromosom... 42 0.56
2gb|AC161513.5| Mus musculus chromosome 3, clone RP23-238A12, com... 42 0.56
3gb|AC107447.5| Rattus norvegicus 4 BAC CH230-46D21 (Children's H... 40 2.2
4gb|AC010212.10| Drosophila melanogaster clone BACR32D05, complet... 40 2.2
5gb|AC098697.4| Rattus norvegicus strain Brown Norway clone RP31-... 40 2.2
6gb|AC154715.2| Mus musculus BAC clone RP24-361A22 from chromosom... 40 2.2
7ref|NM_141401.1| Drosophila melanogaster CG2330-RA (CG2330), mRNA 40 2.2
8gb|AC114778.5| Homo sapiens BAC clone RP11-516O5 from 2, complet... 40 2.2
9emb|BX248331.8| Zebrafish DNA sequence from clone CH211-236D3 in... 40 2.2
10gb|AC026108.29| Homo sapiens 12 BAC RP11-438H24 (Roswell Park Ca... 40 2.2
11gb|AC079903.26| Homo sapiens 12 BAC RP11-449D7 (Roswell Park Can... 40 2.2
12emb|BX321888.21| Zebrafish DNA sequence from clone DKEYP-47D4 in... 40 2.2
13emb|BX296516.3| Zebrafish DNA sequence from clone DKEY-219E20 in... 40 2.2
14gb|AE003675.4| Drosophila melanogaster chromosome 3R, section 9 ... 40 2.2
15dbj|AP000873.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 2.2
16emb|AJ342715.1|HSA342715 Homo sapiens genomic sequence surroundi... 40 2.2
17ref|XM_636067.1| Dictyostelium discoideum hypothetical protein (... 38 8.7
18gb|AC136956.4| Oryza sativa (japonica cultivar-group) chromosome... 38 8.7
19gb|AC116977.2| Dictyostelium discoideum chromosome 2 map 5515173... 38 8.7
20gb|AC124571.5| Mus musculus BAC clone RP23-155I21 from chromosom... 38 8.7
21gb|AC129182.4| Mus musculus BAC clone RP23-340P24 from chromosom... 38 8.7
22emb|CR847515.10| Zebrafish DNA sequence from clone DKEYP-60A7 in... 38 8.7
23gb|AC164633.2| Mus musculus chromosome 15, clone RP24-374C19, co... 38 8.7
24gb|CP000302.1| Shewanella denitrificans OS217, complete genome 38 8.7
25emb|AL445668.10| Human DNA sequence from clone RP11-234O23 on ch... 38 8.7
26emb|AL358072.21| Human DNA sequence from clone RP11-188D8 on chr... 38 8.7
27emb|AL354879.12| Human DNA sequence from clone RP11-4E23 on chro... 38 8.7
28emb|AL109749.22|HSA213H19 Human DNA sequence from clone RP6-213H... 38 8.7
29gb|AC104482.2| Sus scrofa clone RP44-423C21, complete sequence 38 8.7
30emb|AL034558.3|PFMAL3P2 Plasmodium falciparum MAL3P2, complete s... 38 8.7
31emb|CR354543.13| Zebrafish DNA sequence from clone DKEY-14M15 in... 38 8.7
32emb|BX511069.14| Zebrafish DNA sequence from clone CH211-207I1 i... 38 8.7
33emb|CR383661.10| Zebrafish DNA sequence from clone DKEY-44L21 in... 38 8.7
34emb|AL627261.10| Zebrafish DNA sequence from clone RP71-1N11 in ... 38 8.7
35gb|AC107300.6| Homo sapiens 3 BAC RP11-516H5 (Roswell Park Cance... 38 8.7
36emb|BX649311.10| Zebrafish DNA sequence from clone DKEY-63I8 in ... 38 8.7
37gb|AC090071.3| Homo sapiens chromosome 5 clone CTD-2538A21, comp... 38 8.7
38dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, compl... 38 8.7
39gb|AC021761.8| Homo sapiens chromosome 11, clone RP11-361M6, com... 38 8.7
40gb|AC110002.2| Homo sapiens chromosome 5 clone RP11-125A13, comp... 38 8.7
41emb|BX571776.5| Zebrafish DNA sequence from clone CH211-139K15 i... 38 8.7
42emb|BX649538.4| Zebrafish DNA sequence from clone CH211-239N21 i... 38 8.7
43dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.7
44gb|AY235199.1| Meleagris gallopavo clone MNT-90 microsatellite s... 38 8.7
45gb|AC097648.2| Homo sapiens BAC clone RP11-63H19 from 4, complet... 38 8.7
46gb|AC010987.9| Homo sapiens BAC clone RP11-553M15 from 2, comple... 38 8.7
47gb|AC161282.5| Pan troglodytes BAC clone CH251-381O9 from chromo... 38 8.7
48dbj|AB080254.1| Chrysomya rufifacies mitochondrial COI gene for ... 38 8.7
49emb|BX255913.8| Zebrafish DNA sequence from clone DKEY-85N7 in l... 38 8.7
50emb|CT571264.2| Medicago truncatula chromosome 5 clone mth2-146m... 38 8.7
51emb|AL162759.4|CNS01RHZ Human chromosome 14 DNA sequence BAC R-7... 38 8.7
52gb|AC153621.5| Mus musculus 6 BAC RP23-272K20 (Roswell Park Canc... 38 8.7
53emb|AL844544.9| Mouse DNA sequence from clone RP23-230B1 on chro... 38 8.7
54gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 38 8.7
55emb|AL928626.10| Mouse DNA sequence from clone RP23-365O18 on ch... 38 8.7
56emb|AL713894.12| Mouse DNA sequence from clone RP23-48J18 on chr... 38 8.7 
>gb|AC122485.3| Mus musculus BAC clone RP24-377J10 from chromosome 3, complete sequence
          Length = 157739

 Score = 42.1 bits (21), Expect = 0.56
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 154    cataatcataaactcatagca 174
              |||||||||||||||||||||
Sbjct: 153215 cataatcataaactcatagca 153235
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>gb|AC161513.5| Mus musculus chromosome 3, clone RP23-238A12, complete sequence
          Length = 160438

 Score = 42.1 bits (21), Expect = 0.56
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 154   cataatcataaactcatagca 174
             |||||||||||||||||||||
Sbjct: 36277 cataatcataaactcatagca 36297
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>gb|AC107447.5| Rattus norvegicus 4 BAC CH230-46D21 (Children's Hospital Oakland
            Research Institute) complete sequence
          Length = 133054

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 3    acaacatggatacattttat 22
            ||||||||||||||||||||
Sbjct: 4286 acaacatggatacattttat 4267
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>gb|AC010212.10| Drosophila melanogaster clone BACR32D05, complete sequence
          Length = 161579

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   ggcaaacacaaacttcttat 119
             ||||||||||||||||||||
Sbjct: 97029 ggcaaacacaaacttcttat 97010
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>gb|AC098697.4| Rattus norvegicus strain Brown Norway clone RP31-387A21, complete
             sequence
          Length = 123000

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    ggatacattttattatttaa 29
             ||||||||||||||||||||
Sbjct: 76876 ggatacattttattatttaa 76857
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>gb|AC154715.2| Mus musculus BAC clone RP24-361A22 from chromosome 16, complete
             sequence
          Length = 172362

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   gggaagagagtaaaacataa 158
             ||||||||||||||||||||
Sbjct: 84349 gggaagagagtaaaacataa 84368
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>ref|NM_141401.1| Drosophila melanogaster CG2330-RA (CG2330), mRNA
          Length = 2606

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 100  ggcaaacacaaacttcttat 119
            ||||||||||||||||||||
Sbjct: 1407 ggcaaacacaaacttcttat 1388
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>gb|AC114778.5| Homo sapiens BAC clone RP11-516O5 from 2, complete sequence
          Length = 187842

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     cacacacataaattggggaa 96
              ||||||||||||||||||||
Sbjct: 123324 cacacacataaattggggaa 123343
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>emb|BX248331.8| Zebrafish DNA sequence from clone CH211-236D3 in linkage group 11,
             complete sequence
          Length = 174071

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     tggatacattttattattta 28
             ||||||||||||||||||||
Sbjct: 60932 tggatacattttattattta 60951
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>gb|AC026108.29| Homo sapiens 12 BAC RP11-438H24 (Roswell Park Cancer Institute
           Human BAC Library) complete sequence
          Length = 77790

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 5   aacatggatacattttattattta 28
           ||||||||||| ||||||||||||
Sbjct: 361 aacatggatactttttattattta 384
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>gb|AC079903.26| Homo sapiens 12 BAC RP11-449D7 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 11273

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 5    aacatggatacattttattattta 28
            ||||||||||| ||||||||||||
Sbjct: 9630 aacatggatactttttattattta 9653
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>emb|BX321888.21| Zebrafish DNA sequence from clone DKEYP-47D4 in linkage group 20,
             complete sequence
          Length = 176463

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    agctacataacactttacat 67
             ||||||||||||||||||||
Sbjct: 38961 agctacataacactttacat 38980
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>emb|BX296516.3| Zebrafish DNA sequence from clone DKEY-219E20 in linkage group 20,
             complete sequence
          Length = 160555

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    agctacataacactttacat 67
             ||||||||||||||||||||
Sbjct: 59143 agctacataacactttacat 59124
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>gb|AE003675.4| Drosophila melanogaster chromosome 3R, section 9 of 118 of the complete
              sequence
          Length = 145958

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 100    ggcaaacacaaacttcttat 119
              ||||||||||||||||||||
Sbjct: 135498 ggcaaacacaaacttcttat 135479
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>dbj|AP000873.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-727A23, complete
              sequence
          Length = 174905

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 69     aaggacttcacacacataaa 88
              ||||||||||||||||||||
Sbjct: 142547 aaggacttcacacacataaa 142528
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>emb|AJ342715.1|HSA342715 Homo sapiens genomic sequence surrounding NotI site, clone NL1-FA6R
          Length = 761

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  gggaaaagggcaaacacaaa 111
           ||||||||||||||||||||
Sbjct: 539 gggaaaagggcaaacacaaa 558
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>ref|XM_636067.1| Dictyostelium discoideum hypothetical protein (DDB0205183), partial
           mRNA
          Length = 1620

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 19  ttattatttaaggtttcat 37
           |||||||||||||||||||
Sbjct: 608 ttattatttaaggtttcat 590
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>gb|AC136956.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0038B22, complete sequence
          Length = 177557

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 156   taatcataaactcatagca 174
             |||||||||||||||||||
Sbjct: 94385 taatcataaactcatagca 94403
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>gb|AC116977.2| Dictyostelium discoideum chromosome 2 map 5515173-5817331 strain AX4,
              complete sequence
          Length = 302156

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 16     attttattatttaaggttt 34
              |||||||||||||||||||
Sbjct: 249275 attttattatttaaggttt 249257
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>gb|AC124571.5| Mus musculus BAC clone RP23-155I21 from chromosome 2, complete sequence
          Length = 181526

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 9     tggatacattttattatttaagg 31
             |||||| ||||||||||||||||
Sbjct: 71763 tggatatattttattatttaagg 71785
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>gb|AC129182.4| Mus musculus BAC clone RP23-340P24 from chromosome 19, complete sequence
          Length = 187601

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 136    tcagggaagagagtaaaacataatcat 162
              |||| ||||||| ||||||||||||||
Sbjct: 101269 tcagagaagagattaaaacataatcat 101243
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>emb|CR847515.10| Zebrafish DNA sequence from clone DKEYP-60A7 in linkage group 9, complete
              sequence
          Length = 153947

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 16     attttattatttaaggttt 34
              |||||||||||||||||||
Sbjct: 145463 attttattatttaaggttt 145445
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>gb|AC164633.2| Mus musculus chromosome 15, clone RP24-374C19, complete sequence
          Length = 157653

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 111   acttcttataggtgacaca 129
             |||||||||||||||||||
Sbjct: 97165 acttcttataggtgacaca 97147
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>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 89      ttggggaaaagggcaaaca 107
               |||||||||||||||||||
Sbjct: 2452640 ttggggaaaagggcaaaca 2452622
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>emb|AL445668.10| Human DNA sequence from clone RP11-234O23 on chromosome 13 Contains the
             3' end of a novel gene, complete sequence
          Length = 168068

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 16    attttattatttaaggtttcata 38
             ||||||||||||||| |||||||
Sbjct: 19891 attttattatttaagatttcata 19869
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>emb|AL358072.21| Human DNA sequence from clone RP11-188D8 on chromosome 1 Contains the
             5' end of the MAN1A2 gene for mannosidase alpha class 1A
             member 2 and two CpG islands, complete sequence
          Length = 129725

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 9     tggatacattttattattt 27
             |||||||||||||||||||
Sbjct: 55362 tggatacattttattattt 55380
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>emb|AL354879.12| Human DNA sequence from clone RP11-4E23 on chromosome 9 Contains the 5'
             end of the MLLT3 gene for myeloid/lymphoid or
             mixed-lineage leukemia (trithorax homolog, Drosophila);
             translocated to, 3 (AF9), a novel gene, the 5' end of a
             novel gene (FLJ2035, KIAA1797) and two CpG islands,
             complete sequence
          Length = 82270

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 147   agtaaaacataatcataaa 165
             |||||||||||||||||||
Sbjct: 77411 agtaaaacataatcataaa 77393
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>emb|AL109749.22|HSA213H19 Human DNA sequence from clone RP6-213H19 on chromosome Xq25-26.3
             Contains the gene for Mst3 and SOK1-related kinase (MST4),
             LOC90167 gene and a CpG island, complete sequence
          Length = 138902

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 2     cacaacatggatacatttt 20
             |||||||||||||||||||
Sbjct: 47526 cacaacatggatacatttt 47544
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>gb|AC104482.2| Sus scrofa clone RP44-423C21, complete sequence
          Length = 164846

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 58    cactttacataaaggactt 76
             |||||||||||||||||||
Sbjct: 90800 cactttacataaaggactt 90818
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>emb|AL034558.3|PFMAL3P2 Plasmodium falciparum MAL3P2, complete sequence
          Length = 158548

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 12    atacattttattatttaag 30
             |||||||||||||||||||
Sbjct: 93500 atacattttattatttaag 93482
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>emb|CR354543.13| Zebrafish DNA sequence from clone DKEY-14M15 in linkage group 13,
              complete sequence
          Length = 140709

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 8      atggatacattttattatt 26
              |||||||||||||||||||
Sbjct: 136526 atggatacattttattatt 136544
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>emb|BX511069.14| Zebrafish DNA sequence from clone CH211-207I1 in linkage group 20
             Contains the 3' end of the gene for a novel protein
             similar to vertebrate dishevelled associated activator of
             morphogenesis 1 (DAAM1) and three novel genes, complete
             sequence
          Length = 89721

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 12    atacattttattatttaaggttt 34
             ||||||||| |||||||||||||
Sbjct: 61168 atacatttttttatttaaggttt 61146
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>emb|CR383661.10| Zebrafish DNA sequence from clone DKEY-44L21 in linkage group 20 Contains
              the gene for a novel protein similar to mouse and human
              O-acyltransferase (membrane bound) domain containing 2
              (OACT2), the 5' end of the gene for a novel protein similar
              to rat kinase D-interacting substance of 220 kDa
              (RGD:619949) and a CpG island, complete sequence
          Length = 116874

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 8      atggatacattttattatt 26
              |||||||||||||||||||
Sbjct: 107067 atggatacattttattatt 107085
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>emb|AL627261.10| Zebrafish DNA sequence from clone RP71-1N11 in linkage group 9 Contains
             three CpG islands, complete sequence
          Length = 147392

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 151   aaacataatcataaactca 169
             |||||||||||||||||||
Sbjct: 76907 aaacataatcataaactca 76889
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>gb|AC107300.6| Homo sapiens 3 BAC RP11-516H5 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 161699

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 16   attttattatttaaggtttcata 38
            ||||||||||||||| |||||||
Sbjct: 3995 attttattatttaagatttcata 3973
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>emb|BX649311.10| Zebrafish DNA sequence from clone DKEY-63I8 in linkage group 2, complete
              sequence
          Length = 228024

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 12     atacattttattatttaag 30
              |||||||||||||||||||
Sbjct: 133356 atacattttattatttaag 133338
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>gb|AC090071.3| Homo sapiens chromosome 5 clone CTD-2538A21, complete sequence
          Length = 197810

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 20     tattatttaaggtttcata 38
              |||||||||||||||||||
Sbjct: 172483 tattatttaaggtttcata 172465
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>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence
          Length = 3354505

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 96     aaagggcaaacacaaactt 114
              |||||||||||||||||||
Sbjct: 165938 aaagggcaaacacaaactt 165956
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>gb|AC021761.8| Homo sapiens chromosome 11, clone RP11-361M6, complete sequence
          Length = 182789

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 143    agagagtaaaacataatca 161
              |||||||||||||||||||
Sbjct: 118952 agagagtaaaacataatca 118970
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>gb|AC110002.2| Homo sapiens chromosome 5 clone RP11-125A13, complete sequence
          Length = 168708

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 20     tattatttaaggtttcata 38
              |||||||||||||||||||
Sbjct: 128072 tattatttaaggtttcata 128090
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>emb|BX571776.5| Zebrafish DNA sequence from clone CH211-139K15 in linkage group 23,
             complete sequence
          Length = 160455

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 4     caacatggatacattttattatt 26
             ||||||| |||||||||||||||
Sbjct: 40288 caacatgtatacattttattatt 40310
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>emb|BX649538.4| Zebrafish DNA sequence from clone CH211-239N21 in linkage group 3,
            complete sequence
          Length = 147441

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 20   tattatttaaggtttcata 38
            |||||||||||||||||||
Sbjct: 6943 tattatttaaggtttcata 6925
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 156      taatcataaactcatagca 174
                |||||||||||||||||||
Sbjct: 19917318 taatcataaactcatagca 19917336
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>gb|AY235199.1| Meleagris gallopavo clone MNT-90 microsatellite sequence
          Length = 1747

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 8    atggatacattttattatttaag 30
            |||||||||||| ||||||||||
Sbjct: 1269 atggatacatttaattatttaag 1247
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>gb|AC097648.2| Homo sapiens BAC clone RP11-63H19 from 4, complete sequence
          Length = 170289

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 154   cataatcataaactcatag 172
             |||||||||||||||||||
Sbjct: 40252 cataatcataaactcatag 40234
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>gb|AC010987.9| Homo sapiens BAC clone RP11-553M15 from 2, complete sequence
          Length = 193319

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 101    gcaaacacaaacttcttat 119
              |||||||||||||||||||
Sbjct: 150637 gcaaacacaaacttcttat 150655
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>gb|AC161282.5| Pan troglodytes BAC clone CH251-381O9 from chromosome unknown, complete
             sequence
          Length = 172427

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 11    gatacattttattatttaa 29
             |||||||||||||||||||
Sbjct: 60367 gatacattttattatttaa 60349
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>dbj|AB080254.1| Chrysomya rufifacies mitochondrial COI gene for cytochrome oxidase
           I, partial cds, isolate:ChRQ2
          Length = 278

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 15  cattttattatttaaggtt 33
           |||||||||||||||||||
Sbjct: 154 cattttattatttaaggtt 136
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>emb|BX255913.8| Zebrafish DNA sequence from clone DKEY-85N7 in linkage group 20,
             complete sequence
          Length = 248581

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 12    atacattttattatttaag 30
             |||||||||||||||||||
Sbjct: 28851 atacattttattatttaag 28833
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>emb|CT571264.2| Medicago truncatula chromosome 5 clone mth2-146m15, COMPLETE SEQUENCE
          Length = 141614

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 149    taaaacataatcataaact 167
              |||||||||||||||||||
Sbjct: 118434 taaaacataatcataaact 118452
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>emb|AL162759.4|CNS01RHZ Human chromosome 14 DNA sequence BAC R-785G15 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 174273

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 11     gatacattttattatttaa 29
              |||||||||||||||||||
Sbjct: 137962 gatacattttattatttaa 137944
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>gb|AC153621.5| Mus musculus 6 BAC RP23-272K20 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 215547

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 71     ggacttcacacacataaat 89
              |||||||||||||||||||
Sbjct: 113397 ggacttcacacacataaat 113415
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>emb|AL844544.9| Mouse DNA sequence from clone RP23-230B1 on chromosome 2, complete
             sequence
          Length = 156426

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 139   gggaagagagtaaaacata 157
             |||||||||||||||||||
Sbjct: 49040 gggaagagagtaaaacata 49058
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 156      taatcataaactcatagca 174
                |||||||||||||||||||
Sbjct: 20202297 taatcataaactcatagca 20202315
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>emb|AL928626.10| Mouse DNA sequence from clone RP23-365O18 on chromosome 2, complete
              sequence
          Length = 133812

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 9      tggatacattttattatttaagg 31
              |||||| ||||||||||||||||
Sbjct: 119702 tggatatattttattatttaagg 119680
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>emb|AL713894.12| Mouse DNA sequence from clone RP23-48J18 on chromosome X, complete
              sequence
          Length = 264395

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 4      caacatggatacattttattatt 26
              ||||| |||||||||||||||||
Sbjct: 143892 caacaaggatacattttattatt 143914


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,571,519
Number of Sequences: 3902068
Number of extensions: 2571519
Number of successful extensions: 212260
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 211897
Number of HSP's gapped (non-prelim): 363
length of query: 177
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 155
effective length of database: 17,147,199,772
effective search space: 2657815964660
effective search space used: 2657815964660
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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