>gb|AC159336.13| Mus musculus 10 BAC RP24-430N21 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 180454

 Score = 46.1 bits (23), Expect = 0.053
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 213    ctcttgtaaaggaaagcttttatttca 239
              ||||||||||||||||| |||||||||
Sbjct: 134324 ctcttgtaaaggaaagcatttatttca 134350

>gb|AC153852.9| Mus musculus 10 BAC RP23-136F8 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 222518

 Score = 46.1 bits (23), Expect = 0.053
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 213   ctcttgtaaaggaaagcttttatttca 239
             ||||||||||||||||| |||||||||
Sbjct: 27155 ctcttgtaaaggaaagcatttatttca 27181

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 0.82
 Identities = 48/56 (85%), Gaps = 2/56 (3%)
 Strand = Plus / Minus

                                                                        
Query: 190      acaaaataaaacagagtgccgttctcttgtaaaggaaagcttttatttcaagacca 245
                |||| |||||||||||||  ||||||||||||| |||    |||||||||||||||
Sbjct: 26027084 acaagataaaacagagtgttgttctcttgtaaacgaaga--tttatttcaagacca 26027031

>gb|AC154659.2| Mus musculus BAC clone RP24-269K6 from chromosome 17, complete sequence
          Length = 177071

 Score = 42.1 bits (21), Expect = 0.82
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 210   gttctcttgtaaaggaaagct 230
             |||||||||||||||||||||
Sbjct: 62503 gttctcttgtaaaggaaagct 62523

>dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1226_A12
          Length = 113025

 Score = 42.1 bits (21), Expect = 0.82
 Identities = 48/56 (85%), Gaps = 2/56 (3%)
 Strand = Plus / Minus

                                                                     
Query: 190   acaaaataaaacagagtgccgttctcttgtaaaggaaagcttttatttcaagacca 245
             |||| |||||||||||||  ||||||||||||| |||    |||||||||||||||
Sbjct: 64942 acaagataaaacagagtgttgttctcttgtaaacgaaga--tttatttcaagacca 64889

>dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBa0062J02
          Length = 151636

 Score = 42.1 bits (21), Expect = 0.82
 Identities = 48/56 (85%), Gaps = 2/56 (3%)
 Strand = Plus / Minus

                                                                    
Query: 190  acaaaataaaacagagtgccgttctcttgtaaaggaaagcttttatttcaagacca 245
            |||| |||||||||||||  ||||||||||||| |||    |||||||||||||||
Sbjct: 6329 acaagataaaacagagtgttgttctcttgtaaacgaaga--tttatttcaagacca 6276

>dbj|AK101953.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075I24, full
            insert sequence
          Length = 2362

 Score = 42.1 bits (21), Expect = 0.82
 Identities = 48/56 (85%), Gaps = 2/56 (3%)
 Strand = Plus / Minus

                                                                    
Query: 190  acaaaataaaacagagtgccgttctcttgtaaaggaaagcttttatttcaagacca 245
            |||| |||||||||||||  ||||||||||||| |||    |||||||||||||||
Sbjct: 2295 acaagataaaacagagtgttgttctcttgtaaacgaaga--tttatttcaagacca 2242

>dbj|AK071267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086I22, full
           insert sequence
          Length = 1044

 Score = 42.1 bits (21), Expect = 0.82
 Identities = 48/56 (85%), Gaps = 2/56 (3%)
 Strand = Plus / Minus

                                                                   
Query: 190 acaaaataaaacagagtgccgttctcttgtaaaggaaagcttttatttcaagacca 245
           |||| |||||||||||||  ||||||||||||| |||    |||||||||||||||
Sbjct: 941 acaagataaaacagagtgttgttctcttgtaaacgaaga--tttatttcaagacca 888

>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete
              sequence
          Length = 3214944

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     cccttgaattaaaaactttc 103
              ||||||||||||||||||||
Sbjct: 169938 cccttgaattaaaaactttc 169919

>gb|AC006404.25| Mus musculus strain 129/Sv clone ct7-141k23 map 6, complete sequence
          Length = 142777

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 181   acccccaagacaaaataaaacaga 204
             ||||||||||||||| ||||||||
Sbjct: 62137 acccccaagacaaaacaaaacaga 62160

>gb|AC006447.24| Mus musculus strain 129/Sv clone ct7-67d14 map 6, complete sequence
          Length = 140454

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 181    acccccaagacaaaataaaacaga 204
              ||||||||||||||| ||||||||
Sbjct: 121434 acccccaagacaaaacaaaacaga 121457

>emb|AL158064.16| Human DNA sequence from clone RP11-470M1 on chromosome 13, complete
              sequence
          Length = 160587

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 221    aaggaaagcttttatttcaa 240
              ||||||||||||||||||||
Sbjct: 144253 aaggaaagcttttatttcaa 144234

>gb|AC133796.2| Homo sapiens 3 BAC RP11-10I2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 125170

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     caggggaaaatagcacttcc 68
              ||||||||||||||||||||
Sbjct: 104075 caggggaaaatagcacttcc 104056

>gb|AC107621.2| Homo sapiens chromosome 3 clone RP11-632N21, complete sequence
          Length = 153582

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 134    ttttcgggagaaatgaaatt 153
              ||||||||||||||||||||
Sbjct: 115233 ttttcgggagaaatgaaatt 115214

>gb|AC107383.3| Homo sapiens BAC clone RP11-125C20 from 4, complete sequence
          Length = 173808

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 141   gagaaatgaaattaaagatt 160
             ||||||||||||||||||||
Sbjct: 71405 gagaaatgaaattaaagatt 71386

>gb|AC008860.7| Homo sapiens chromosome 5 clone CTD-2185A1, complete sequence
          Length = 105885

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   tccccatggttttattcatg 132
             ||||||||||||||||||||
Sbjct: 16388 tccccatggttttattcatg 16369

>gb|AC016612.6| Homo sapiens chromosome 5 clone CTD-2197M16, complete sequence
          Length = 179513

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    tccccatggttttattcatg 132
              ||||||||||||||||||||
Sbjct: 119773 tccccatggttttattcatg 119754

>gb|AC157086.2| Mus musculus BAC clone RP24-79B18 from chromosome 9, complete sequence
          Length = 200734

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    aaatagcacttccaaggaaa 75
             ||||||||||||||||||||
Sbjct: 51206 aaatagcacttccaaggaaa 51187

>gb|AC020611.15| Homo sapiens 12 BAC RP11-1029F8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188972

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 218    gtaaaggaaagcttttattt 237
              ||||||||||||||||||||
Sbjct: 143151 gtaaaggaaagcttttattt 143132

>gb|AC084273.20| Mus musculus strain C57BL/6J chromosome 6 clone rp23-313e8, complete
              sequence
          Length = 182818

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 181    acccccaagacaaaataaaacaga 204
              ||||||||||||||| ||||||||
Sbjct: 177772 acccccaagacaaaacaaaacaga 177795

>emb|AL929191.9| Mouse DNA sequence from clone RP23-330G15 on chromosome 2, complete
              sequence
          Length = 192196

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 213    ctcttgtaaaggaaagcttttatt 236
              ||||||||||||||||| ||||||
Sbjct: 165500 ctcttgtaaaggaaagcatttatt 165523

>gb|AC083894.21| Mus musculus strain C57BL/6J chromosome 6 clone rp23-259j8, complete
              sequence
          Length = 167273

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 181    acccccaagacaaaataaaacaga 204
              ||||||||||||||| ||||||||
Sbjct: 133884 acccccaagacaaaacaaaacaga 133861


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,435,829
Number of Sequences: 3902068
Number of extensions: 3435829
Number of successful extensions: 67720
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67653
Number of HSP's gapped (non-prelim): 67
length of query: 251
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 229
effective length of database: 17,147,199,772
effective search space: 3926708747788
effective search space used: 3926708747788
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)