>CEMA_CHAGL (Q8M9X3) Chloroplast envelope membrane protein|
          Length = 472

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
 Frame = -1

Query: 320 QPRELSRPMHSRTTEMYIVYNFDS----LCLGVKFADLYTLVA--------LTVLNVWRR 177
           QP++L   +H RT ++   YN DS    L L   F  ++TL+         L +LN W  
Sbjct: 323 QPQDLGALIHQRTIQLAEYYNQDSINIILHLFTDFIAIFTLIVLLILGKKRLAILNSW-- 380

Query: 176 RQPCYAGLSLCLCCQLYFIYTLLCLEF 96
            Q  +  L+  +   L  ++T LC+ F
Sbjct: 381 VQEVFYSLTDTMKAFLILLFTDLCIGF 407

>MASS1_MOUSE (Q8VHN7) Monogenic audiogenic seizure susceptibility protein 1|
            precursor (Very large G-protein coupled receptor 1)
            (Neurepin)
          Length = 6298

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = +3

Query: 282  GAAVHGSREFSRLRTTQPSSPNSLVNFSCTSR 377
            GAA++ S  F+ ++ ++  +P SLV+FS  SR
Sbjct: 5467 GAAINNSARFAPIKLSKSGAPQSLVSFSVGSR 5498

>DYN1_HUMAN (Q05193) Dynamin-1 (EC 3.6.5.5)|
          Length = 864

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 17/38 (44%), Positives = 18/38 (47%)
 Frame = +1

Query: 325 PLSPPRQTPW*TSRAPPGPSCRQSVSASRGPSRNRSSR 438
           P  PP Q P   +RAPPG   R   S    PSR  S R
Sbjct: 825 PFGPPPQVPSRPNRAPPGVPSR---SGQASPSRPESPR 859

>TOM40_MOUSE (Q9QYA2) Probable mitochondrial import receptor subunit TOM40|
           homolog (Translocase of outer membrane 40 kDa subunit
           homolog)
          Length = 359

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 5/52 (9%)
 Frame = +1

Query: 295 MGRESSRGCVPLSPPRQTPW*TSRAPPGPS-----CRQSVSASRGPSRNRSS 435
           MG   +    P  PP  TP      PP PS     CR+S +   G S  R S
Sbjct: 1   MGNVLAASSPPARPPPPTPSLVGLPPPPPSPPRSLCRRSAALGTGSSTGRGS 52

>PTK6_HUMAN (Q13882) Tyrosine-protein kinase 6 (EC 2.7.10.2) (Breast tumor|
           kinase) (Tyrosine-protein kinase BRK)
          Length = 451

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -1

Query: 419 EGPREAETDCRQEGPGGAREVHQGVWR 339
           E PRE  T CR+ G G   EV +G+W+
Sbjct: 185 ERPREEFTLCRKLGSGYFGEVFEGLWK 211

>WIRE_MOUSE (Q6PEV3) WIP-related protein (WASP-interacting protein-related|
           protein)
          Length = 440

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 6/51 (11%)
 Frame = +1

Query: 286 RLCMGRESSRGCVPLSPP------RQTPW*TSRAPPGPSCRQSVSASRGPS 420
           RL  GRE      P+ PP      R  P   S APP P  RQ      GPS
Sbjct: 216 RLHPGREGHPAPPPVKPPPSPVNIRTGPSGQSLAPPPPPYRQPPGVPNGPS 266

>WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protein-related|
           protein) (WIP-and CR16-homologous protein)
          Length = 440

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 6/51 (11%)
 Frame = +1

Query: 286 RLCMGRESSRGCVPLSPP------RQTPW*TSRAPPGPSCRQSVSASRGPS 420
           RL  GRE      P+ PP      R  P   S APP P  RQ      GPS
Sbjct: 216 RLHPGREGPPAPPPVKPPPSPVNIRTGPSGQSLAPPPPPYRQPPGVPNGPS 266

>SAK1_SCHPO (P48383) Protein sak1|
          Length = 766

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +3

Query: 273 HFCGAAVHGSREFSRLRTTQPSSPNSLVNFSCTS 374
           H+CG  + G   F RLRT    S +SL   SC+S
Sbjct: 168 HYCGIKLRGQDSFRRLRT---FSDSSLSPVSCSS 198

>ZNHI4_MOUSE (Q99PT3) Zinc finger HIT domain-containing protein 4|
           (PAP-1-associated protein 1) (PAPA-1) (High mobility
           group AT-hook 1-like 4)
          Length = 345

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 19/53 (35%), Positives = 22/53 (41%)
 Frame = +1

Query: 280 VVRLCMGRESSRGCVPLSPPRQTPW*TSRAPPGPSCRQSVSASRGPSRNRSSR 438
           +VR C G + S    P   P  T      AP GP+ R SV     P R   SR
Sbjct: 261 MVRYCSGAQGSTLSFPPGVPTPTAVAQRPAPSGPAPRCSVPGCPHPRRYACSR 313


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,809,533
Number of Sequences: 219361
Number of extensions: 1222218
Number of successful extensions: 3740
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3737
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)