>gb|AY105155.1| Zea mays PCO107552 mRNA sequence
          Length = 1776

 Score =  119 bits (60), Expect = 8e-24
 Identities = 87/96 (90%)
 Strand = Plus / Minus

                                                                        
Query: 329  tcagccctcctcgccaaactccttggtgaacttctcgtgcacctccaggtccttcttgcc 388
            ||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||| 
Sbjct: 1507 tcagccctcctcgccgaactccttcgtgaacctctcgtgcacctccaggtccttcttgct 1448

                                                
Query: 389  gacagtcggtctctgcctcgcgaggaccttctcgaa 424
             || ||||| ||||||||||  ||||||||||||||
Sbjct: 1447 aaccgtcggcctctgcctcgacaggaccttctcgaa 1412

>ref|XM_550086.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1071

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 82/95 (86%)
 Strand = Plus / Minus

                                                                       
Query: 333 ccctcctcgccaaactccttggtgaacttctcgtgcacctccaggtccttcttgccgaca 392
           |||||||||||||| || || || ||| | ||||||||||||| ||| |||||||  || 
Sbjct: 806 ccctcctcgccaaattcttttgtaaacctttcgtgcacctccaagtctttcttgctcact 747

                                              
Query: 393 gtcggtctctgcctcgcgaggaccttctcgaaatc 427
           |||||||||||||| |||||||| |||||||||||
Sbjct: 746 gtcggtctctgcctggcgaggactttctcgaaatc 712

>gb|AF499028.1| Oryza sativa (japonica cultivar-group) AAA-ATPase-like protein mRNA,
            complete cds
          Length = 1465

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 82/95 (86%)
 Strand = Plus / Minus

                                                                        
Query: 333  ccctcctcgccaaactccttggtgaacttctcgtgcacctccaggtccttcttgccgaca 392
            |||||||||||||| || || || ||| | ||||||||||||| ||| |||||||  || 
Sbjct: 1380 ccctcctcgccaaattcttttgtaaacctttcgtgcacctccaagtctttcttgctcact 1321

                                               
Query: 393  gtcggtctctgcctcgcgaggaccttctcgaaatc 427
            |||||||||||||| |||||||| |||||||||||
Sbjct: 1320 gtcggtctctgcctggcgaggactttctcgaaatc 1286

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                           
Query: 333     ccctcctcgccaaactccttggtgaacttctcgtgcacctccaggtccttcttgccgaca 392
               |||||||||||||| || || || ||| | ||||||||||||| ||| |||||||  || 
Sbjct: 2214927 ccctcctcgccaaattcttttgtaaacctttcgtgcacctccaagtctttcttgctcact 2214986

                                                  
Query: 393     gtcggtctctgcctcgcgaggaccttctcgaaatc 427
               |||||||||||||| |||||||| |||||||||||
Sbjct: 2214987 gtcggtctctgcctggcgaggactttctcgaaatc 2215021



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 30      ctatacaagctgcaccacaagg 51
               ||||||||||||||||||||||
Sbjct: 2214651 ctatacaagctgcaccacaagg 2214672



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 72/89 (80%)
 Strand = Plus / Plus

                                                                           
Query: 354     gtgaacttctcgtgcacctccaggtccttcttgccgacagtcggtctctgcctcgcgagg 413
               ||||||||||| | |||| | || || |||||||  || || |||||||||||| |||||
Sbjct: 2225632 gtgaacttctcatacaccactagatctttcttgctcaccgttggtctctgcctcacgagg 2225691

                                            
Query: 414     accttctcgaaatcgctcttcgagattgg 442
               || |  ||||||||  |||| ||||||||
Sbjct: 2225692 acttcatcgaaatctatctttgagattgg 2225720

>dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0480E02
          Length = 141862

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                          
Query: 333    ccctcctcgccaaactccttggtgaacttctcgtgcacctccaggtccttcttgccgaca 392
              |||||||||||||| || || || ||| | ||||||||||||| ||| |||||||  || 
Sbjct: 136039 ccctcctcgccaaattcttttgtaaacctttcgtgcacctccaagtctttcttgctcact 136098

                                                 
Query: 393    gtcggtctctgcctcgcgaggaccttctcgaaatc 427
              |||||||||||||| |||||||| |||||||||||
Sbjct: 136099 gtcggtctctgcctggcgaggactttctcgaaatc 136133



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 30     ctatacaagctgcaccacaagg 51
              ||||||||||||||||||||||
Sbjct: 135763 ctatacaagctgcaccacaagg 135784

>dbj|AK067644.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114F09, full
            insert sequence
          Length = 1755

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 82/95 (86%)
 Strand = Plus / Minus

                                                                        
Query: 333  ccctcctcgccaaactccttggtgaacttctcgtgcacctccaggtccttcttgccgaca 392
            |||||||||||||| || || || ||| | ||||||||||||| ||| |||||||  || 
Sbjct: 1490 ccctcctcgccaaattcttttgtaaacctttcgtgcacctccaagtctttcttgctcact 1431

                                               
Query: 393  gtcggtctctgcctcgcgaggaccttctcgaaatc 427
            |||||||||||||| |||||||| |||||||||||
Sbjct: 1430 gtcggtctctgcctggcgaggactttctcgaaatc 1396

>dbj|AK062139.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-F12, full
           insert sequence
          Length = 1160

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 82/95 (86%)
 Strand = Plus / Minus

                                                                       
Query: 333 ccctcctcgccaaactccttggtgaacttctcgtgcacctccaggtccttcttgccgaca 392
           |||||||||||||| || || || ||| | ||||||||||||| ||| |||||||  || 
Sbjct: 909 ccctcctcgccaaattcttttgtaaacctttcgtgcacctccaagtctttcttgctcact 850

                                              
Query: 393 gtcggtctctgcctcgcgaggaccttctcgaaatc 427
           |||||||||||||| |||||||| |||||||||||
Sbjct: 849 gtcggtctctgcctggcgaggactttctcgaaatc 815

>ref|XM_550087.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1437

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 72/89 (80%)
 Strand = Plus / Minus

                                                                        
Query: 354  gtgaacttctcgtgcacctccaggtccttcttgccgacagtcggtctctgcctcgcgagg 413
            ||||||||||| | |||| | || || |||||||  || || |||||||||||| |||||
Sbjct: 1214 gtgaacttctcatacaccactagatctttcttgctcaccgttggtctctgcctcacgagg 1155

                                         
Query: 414  accttctcgaaatcgctcttcgagattgg 442
            || |  ||||||||  |||| ||||||||
Sbjct: 1154 acttcatcgaaatctatctttgagattgg 1126

>gb|AC102622.7| Mus musculus chromosome 3, clone RP23-434O10, complete sequence
          Length = 237899

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 5     tagataccagaaaaaattaaa 25
             |||||||||||||||||||||
Sbjct: 65525 tagataccagaaaaaattaaa 65505

>emb|AL079339.11|HSJ906P16 Human DNA sequence from clone RP5-906P16 on chromosome 20q13.12-13.2
             Contains ESTs, STSs and GSSs, complete sequence
          Length = 86719

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 123   gaaatagagttgacaacagaggcac 147
             |||||||||||| ||||||||||||
Sbjct: 72332 gaaatagagttgccaacagaggcac 72356

>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 345     aactccttggtgaacttctcg 365
               |||||||||||||||||||||
Sbjct: 1120093 aactccttggtgaacttctcg 1120073

>gb|AC144561.8| Homo sapiens 3 BAC RP11-628C23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 35869

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 63    taataatcaattattccttaataca 87
             |||||||||||||| ||||||||||
Sbjct: 23282 taataatcaattataccttaataca 23258

>gb|AF419850.1|AF419850 Musa acuminata suppressor of K+ transport growth defect-like
           protein (SDK1) mRNA, partial cds
          Length = 1020

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 331 agccctcctcgccaaactccttggtgaacttctcgtgcacctccaggtc 379
           ||||||| || ||||||||||| |||||  |||||||||| || |||||
Sbjct: 877 agccctcttccccaaactcctttgtgaatctctcgtgcacttcgaggtc 829

>dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
            clone:P0019D06
          Length = 167405

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 72/89 (80%)
 Strand = Plus / Plus

                                                                        
Query: 354  gtgaacttctcgtgcacctccaggtccttcttgccgacagtcggtctctgcctcgcgagg 413
            ||||||||||| | |||| | || || |||||||  || || |||||||||||| |||||
Sbjct: 9216 gtgaacttctcatacaccactagatctttcttgctcaccgttggtctctgcctcacgagg 9275

                                         
Query: 414  accttctcgaaatcgctcttcgagattgg 442
            || |  ||||||||  |||| ||||||||
Sbjct: 9276 acttcatcgaaatctatctttgagattgg 9304

>emb|BX957286.14| Zebrafish DNA sequence from clone CH211-119B12 in linkage group 20,
              complete sequence
          Length = 161104

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 15     aaaaaattaaaacagctatac 35
              |||||||||||||||||||||
Sbjct: 128644 aaaaaattaaaacagctatac 128664

>emb|AL139021.6|CNS01DX3 Human chromosome 14 DNA sequence BAC R-517O13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 176343

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 79    cttaatacacttgcagaaaat 99
             |||||||||||||||||||||
Sbjct: 73098 cttaatacacttgcagaaaat 73078

>emb|AL683824.8| Mouse DNA sequence from clone RP23-90O18 on chromosome 3, complete
              sequence
          Length = 233589

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 5      tagataccagaaaaaattaaa 25
              |||||||||||||||||||||
Sbjct: 213912 tagataccagaaaaaattaaa 213932

>gb|AC154808.2| Mus musculus BAC clone RP24-512K19 from chromosome 13, complete
             sequence
          Length = 187080

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   ttaagcacagtaagggctac 209
             ||||||||||||||||||||
Sbjct: 91895 ttaagcacagtaagggctac 91876

>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete
               sequence
          Length = 2300533

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 284     tgcggctgtgcatgggtcga 303
               ||||||||||||||||||||
Sbjct: 1976887 tgcggctgtgcatgggtcga 1976906

>gb|BC079676.1| Mus musculus RIKEN cDNA 8430419L09 gene, mRNA (cDNA clone
            IMAGE:30363991)
          Length = 4152

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 15   aaaaaattaaaacagctata 34
            ||||||||||||||||||||
Sbjct: 2142 aaaaaattaaaacagctata 2123

>ref|NM_028982.2| Mus musculus RIKEN cDNA 8430419L09 gene (8430419L09Rik), mRNA
          Length = 2929

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 15   aaaaaattaaaacagctata 34
            ||||||||||||||||||||
Sbjct: 2151 aaaaaattaaaacagctata 2132

>gb|AC122820.4| Mus musculus BAC clone RP23-200M5 from chromosome 6, complete sequence
          Length = 215238

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     aaaaaattaaaacagctata 34
              ||||||||||||||||||||
Sbjct: 186391 aaaaaattaaaacagctata 186410

>gb|BC003918.1| Mus musculus RIKEN cDNA 8430419L09 gene, mRNA (cDNA clone
           IMAGE:3485041), partial cds
          Length = 2809

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 15  aaaaaattaaaacagctata 34
           ||||||||||||||||||||
Sbjct: 814 aaaaaattaaaacagctata 795

>emb|CR377220.10| Zebrafish DNA sequence from clone DKEY-279E10 in linkage group 1,
              complete sequence
          Length = 169012

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 238    cccaagcacaacgaatcaaa 257
              ||||||||||||||||||||
Sbjct: 136951 cccaagcacaacgaatcaaa 136932

>emb|AL390835.14| Human DNA sequence from clone RP5-1119O21 on chromosome 10 Contains the
             5' end of a novel gene and a novel gene, complete sequence
          Length = 65508

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    agaaaaaattaaaacagcta 32
             ||||||||||||||||||||
Sbjct: 39754 agaaaaaattaaaacagcta 39773

>gb|AF181898.6| Homo sapiens chromosome 8 clone GS1-402E12 map p23, complete sequence
          Length = 261151

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   catacgttaagcacagtaag 203
             ||||||||||||||||||||
Sbjct: 75253 catacgttaagcacagtaag 75272

>gb|AC090597.9| Homo sapiens chromosome 11, clone RP11-541L7, complete sequence
          Length = 160210

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 64     aataatcaattattccttaa 83
              ||||||||||||||||||||
Sbjct: 103137 aataatcaattattccttaa 103156

>gb|AC158149.3| Mus musculus chromosome 5, clone RP24-296L6, complete sequence
          Length = 155517

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     gataccagaaaaaattaaaa 26
             ||||||||||||||||||||
Sbjct: 30171 gataccagaaaaaattaaaa 30152

>gb|AC040968.6| Homo sapiens chromosome 11, clone RP11-372B5, complete sequence
          Length = 176988

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 3     agtagataccagaaaaaattaaaa 26
             ||||| ||||||||||||||||||
Sbjct: 84930 agtaggtaccagaaaaaattaaaa 84953

>gb|AC005010.2| Homo sapiens BAC clone GS1-110L19 from 8, complete sequence
          Length = 197498

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 184    catacgttaagcacagtaag 203
              ||||||||||||||||||||
Sbjct: 109221 catacgttaagcacagtaag 109240

>gb|AC067902.6| Homo sapiens chromosome 11, clone RP11-72C9, complete sequence
          Length = 189071

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 3     agtagataccagaaaaaattaaaa 26
             ||||| ||||||||||||||||||
Sbjct: 11698 agtaggtaccagaaaaaattaaaa 11675

>dbj|AK039401.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched
            library, clone:A330040A19 product:hypothetical
            Quinoprotein alcohol dehydrogenase structure containing
            protein, full insert sequence
          Length = 2929

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 15   aaaaaattaaaacagctata 34
            ||||||||||||||||||||
Sbjct: 2151 aaaaaattaaaacagctata 2132

>dbj|AK018428.1| Mus musculus 16 days embryo lung cDNA, RIKEN full-length enriched
            library, clone:8430419L09 product:hypothetical
            Quinoprotein alcohol dehydrogenase structure containing
            protein, full insert sequence
          Length = 2205

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 15   aaaaaattaaaacagctata 34
            ||||||||||||||||||||
Sbjct: 2159 aaaaaattaaaacagctata 2140

>gb|AC111039.13| Mus musculus chromosome 5, clone RP24-463M5, complete sequence
          Length = 141949

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     gataccagaaaaaattaaaa 26
             ||||||||||||||||||||
Sbjct: 69089 gataccagaaaaaattaaaa 69070


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,211,937
Number of Sequences: 3902068
Number of extensions: 4211937
Number of successful extensions: 86538
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86431
Number of HSP's gapped (non-prelim): 107
length of query: 443
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 421
effective length of database: 17,147,199,772
effective search space: 7218971104012
effective search space used: 7218971104012
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)