Clone Name | rbart08f08 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_188159.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1080 Score = 192 bits (97), Expect = 7e-46 Identities = 157/177 (88%) Strand = Plus / Minus Query: 302 tacgcgtcgcgctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaac 361 |||||||| || ||||||| |||||| || ||||||||||||| |||||| |||||||| Sbjct: 883 tacgcgtcacgttcctggacccagagctccgcgaactcgcagttcttgtactgctcgaac 824 Query: 362 cacggcccgccggacgtgtagtgtatggcgcgcggcgcggtcccgcccacgtccgccggg 421 |||||||||||||| |||||||| |||||||||||||| |||||| || ||| || ||| Sbjct: 823 cacggcccgccggaagtgtagtggatggcgcgcggcgccgtcccggccgtgtcggcgggg 764 Query: 422 tccacgcggttgtgccccacgaggaagttccacgcgaacggcacctcgccgacgtcg 478 || |||||||||||||||||||||||||||||| |||| ||||||||||||| |||| Sbjct: 763 tcgacgcggttgtgccccacgaggaagttccacacgaagggcacctcgccgatgtcg 707
>ref|XM_506285.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0077F02.110 mRNA Length = 1092 Score = 192 bits (97), Expect = 7e-46 Identities = 157/177 (88%) Strand = Plus / Minus Query: 302 tacgcgtcgcgctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaac 361 |||||||| || ||||||| |||||| || ||||||||||||| |||||| |||||||| Sbjct: 869 tacgcgtcacgttcctggacccagagctccgcgaactcgcagttcttgtactgctcgaac 810 Query: 362 cacggcccgccggacgtgtagtgtatggcgcgcggcgcggtcccgcccacgtccgccggg 421 |||||||||||||| |||||||| |||||||||||||| |||||| || ||| || ||| Sbjct: 809 cacggcccgccggaagtgtagtggatggcgcgcggcgccgtcccggccgtgtcggcgggg 750 Query: 422 tccacgcggttgtgccccacgaggaagttccacgcgaacggcacctcgccgacgtcg 478 || |||||||||||||||||||||||||||||| |||| ||||||||||||| |||| Sbjct: 749 tcgacgcggttgtgccccacgaggaagttccacacgaagggcacctcgccgatgtcg 693
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 192 bits (97), Expect = 7e-46 Identities = 157/177 (88%) Strand = Plus / Plus Query: 302 tacgcgtcgcgctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaac 361 |||||||| || ||||||| |||||| || ||||||||||||| |||||| |||||||| Sbjct: 12984179 tacgcgtcacgttcctggacccagagctccgcgaactcgcagttcttgtactgctcgaac 12984238 Query: 362 cacggcccgccggacgtgtagtgtatggcgcgcggcgcggtcccgcccacgtccgccggg 421 |||||||||||||| |||||||| |||||||||||||| |||||| || ||| || ||| Sbjct: 12984239 cacggcccgccggaagtgtagtggatggcgcgcggcgccgtcccggccgtgtcggcgggg 12984298 Query: 422 tccacgcggttgtgccccacgaggaagttccacgcgaacggcacctcgccgacgtcg 478 || |||||||||||||||||||||||||||||| |||| ||||||||||||| |||| Sbjct: 12984299 tcgacgcggttgtgccccacgaggaagttccacacgaagggcacctcgccgatgtcg 12984355
>dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077F02 Length = 172442 Score = 192 bits (97), Expect = 7e-46 Identities = 157/177 (88%) Strand = Plus / Plus Query: 302 tacgcgtcgcgctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaac 361 |||||||| || ||||||| |||||| || ||||||||||||| |||||| |||||||| Sbjct: 58476 tacgcgtcacgttcctggacccagagctccgcgaactcgcagttcttgtactgctcgaac 58535 Query: 362 cacggcccgccggacgtgtagtgtatggcgcgcggcgcggtcccgcccacgtccgccggg 421 |||||||||||||| |||||||| |||||||||||||| |||||| || ||| || ||| Sbjct: 58536 cacggcccgccggaagtgtagtggatggcgcgcggcgccgtcccggccgtgtcggcgggg 58595 Query: 422 tccacgcggttgtgccccacgaggaagttccacgcgaacggcacctcgccgacgtcg 478 || |||||||||||||||||||||||||||||| |||| ||||||||||||| |||| Sbjct: 58596 tcgacgcggttgtgccccacgaggaagttccacacgaagggcacctcgccgatgtcg 58652
>dbj|AK120684.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013164D19, full insert sequence Length = 1040 Score = 192 bits (97), Expect = 7e-46 Identities = 157/177 (88%) Strand = Plus / Minus Query: 302 tacgcgtcgcgctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaac 361 |||||||| || ||||||| |||||| || ||||||||||||| |||||| |||||||| Sbjct: 879 tacgcgtcacgttcctggacccagagctccgcgaactcgcagttcttgtactgctcgaac 820 Query: 362 cacggcccgccggacgtgtagtgtatggcgcgcggcgcggtcccgcccacgtccgccggg 421 |||||||||||||| |||||||| |||||||||||||| |||||| || ||| || ||| Sbjct: 819 cacggcccgccggaagtgtagtggatggcgcgcggcgccgtcccggccgtgtcggcgggg 760 Query: 422 tccacgcggttgtgccccacgaggaagttccacgcgaacggcacctcgccgacgtcg 478 || |||||||||||||||||||||||||||||| |||| ||||||||||||| |||| Sbjct: 759 tcgacgcggttgtgccccacgaggaagttccacacgaagggcacctcgccgatgtcg 703
>dbj|AK104173.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B12, full insert sequence Length = 966 Score = 192 bits (97), Expect = 7e-46 Identities = 157/177 (88%) Strand = Plus / Minus Query: 302 tacgcgtcgcgctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaac 361 |||||||| || ||||||| |||||| || ||||||||||||| |||||| |||||||| Sbjct: 743 tacgcgtcacgttcctggacccagagctccgcgaactcgcagttcttgtactgctcgaac 684 Query: 362 cacggcccgccggacgtgtagtgtatggcgcgcggcgcggtcccgcccacgtccgccggg 421 |||||||||||||| |||||||| |||||||||||||| |||||| || ||| || ||| Sbjct: 683 cacggcccgccggaagtgtagtggatggcgcgcggcgccgtcccggccgtgtcggcgggg 624 Query: 422 tccacgcggttgtgccccacgaggaagttccacgcgaacggcacctcgccgacgtcg 478 || |||||||||||||||||||||||||||||| |||| ||||||||||||| |||| Sbjct: 623 tcgacgcggttgtgccccacgaggaagttccacacgaagggcacctcgccgatgtcg 567
>dbj|AK104124.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-D05, full insert sequence Length = 1080 Score = 192 bits (97), Expect = 7e-46 Identities = 157/177 (88%) Strand = Plus / Minus Query: 302 tacgcgtcgcgctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaac 361 |||||||| || ||||||| |||||| || ||||||||||||| |||||| |||||||| Sbjct: 883 tacgcgtcacgttcctggacccagagctccgcgaactcgcagttcttgtactgctcgaac 824 Query: 362 cacggcccgccggacgtgtagtgtatggcgcgcggcgcggtcccgcccacgtccgccggg 421 |||||||||||||| |||||||| |||||||||||||| |||||| || ||| || ||| Sbjct: 823 cacggcccgccggaagtgtagtggatggcgcgcggcgccgtcccggccgtgtcggcgggg 764 Query: 422 tccacgcggttgtgccccacgaggaagttccacgcgaacggcacctcgccgacgtcg 478 || |||||||||||||||||||||||||||||| |||| ||||||||||||| |||| Sbjct: 763 tcgacgcggttgtgccccacgaggaagttccacacgaagggcacctcgccgatgtcg 707
>dbj|AK061478.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-G06, full insert sequence Length = 1092 Score = 192 bits (97), Expect = 7e-46 Identities = 157/177 (88%) Strand = Plus / Minus Query: 302 tacgcgtcgcgctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaac 361 |||||||| || ||||||| |||||| || ||||||||||||| |||||| |||||||| Sbjct: 869 tacgcgtcacgttcctggacccagagctccgcgaactcgcagttcttgtactgctcgaac 810 Query: 362 cacggcccgccggacgtgtagtgtatggcgcgcggcgcggtcccgcccacgtccgccggg 421 |||||||||||||| |||||||| |||||||||||||| |||||| || ||| || ||| Sbjct: 809 cacggcccgccggaagtgtagtggatggcgcgcggcgccgtcccggccgtgtcggcgggg 750 Query: 422 tccacgcggttgtgccccacgaggaagttccacgcgaacggcacctcgccgacgtcg 478 || |||||||||||||||||||||||||||||| |||| ||||||||||||| |||| Sbjct: 749 tcgacgcggttgtgccccacgaggaagttccacacgaagggcacctcgccgatgtcg 693
>dbj|AK060411.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-E03, full insert sequence Length = 954 Score = 192 bits (97), Expect = 7e-46 Identities = 157/177 (88%) Strand = Plus / Minus Query: 302 tacgcgtcgcgctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaac 361 |||||||| || ||||||| |||||| || ||||||||||||| |||||| |||||||| Sbjct: 749 tacgcgtcacgttcctggacccagagctccgcgaactcgcagttcttgtactgctcgaac 690 Query: 362 cacggcccgccggacgtgtagtgtatggcgcgcggcgcggtcccgcccacgtccgccggg 421 |||||||||||||| |||||||| |||||||||||||| |||||| || ||| || ||| Sbjct: 689 cacggcccgccggaagtgtagtggatggcgcgcggcgccgtcccggccgtgtcggcgggg 630 Query: 422 tccacgcggttgtgccccacgaggaagttccacgcgaacggcacctcgccgacgtcg 478 || |||||||||||||||||||||||||||||| |||| ||||||||||||| |||| Sbjct: 629 tcgacgcggttgtgccccacgaggaagttccacacgaagggcacctcgccgatgtcg 573
>gb|AY111750.1| Zea mays CL10536_1 mRNA sequence Length = 666 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 313 ctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaaccacggcccgcc 372 ||||| || |||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 382 ctccttgagccagaggtcggcgaactcgcagtccctgtagcgctcgaaccacggcccgcc 441 Query: 373 ggacgtgtagtgtatggc 390 ||| |||||||| ||||| Sbjct: 442 ggaggtgtagtggatggc 459 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 418 cgggtccacgcggttgtgccccacgaggaagttccacgcgaacggcacctcgccga 473 |||||| || |||||||| ||||||||||||||||| ||||| |||||||| |||| Sbjct: 484 cgggtcgacccggttgtggcccacgaggaagttccaggcgaagggcacctccccga 539
>ref|NM_197354.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0076F20.4), mRNA Length = 1255 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 313 ctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaaccacggcccgcc 372 ||||| ||||||||| |||||||| ||||||| ||||| |||||||||||||||||| Sbjct: 818 ctccttgatccagagctcggcgaagtcgcagttcctgtacctctcgaaccacggcccgcc 759 Query: 373 ggacgtgtagtgtatggc 390 ||| |||||||| ||||| Sbjct: 758 ggaggtgtagtggatggc 741 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 430 gttgtgccccacgaggaagttccacgcgaacggcacctcgccga 473 |||||| || |||||||||||||| ||||| || | |||||||| Sbjct: 704 gttgtggccgacgaggaagttccaggcgaaggggatctcgccga 661
>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete sequence Length = 165394 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 313 ctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaaccacggcccgcc 372 ||||| ||||||||| |||||||| ||||||| ||||| |||||||||||||||||| Sbjct: 24838 ctccttgatccagagctcggcgaagtcgcagttcctgtacctctcgaaccacggcccgcc 24897 Query: 373 ggacgtgtagtgtatggc 390 ||| |||||||| ||||| Sbjct: 24898 ggaggtgtagtggatggc 24915 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 430 gttgtgccccacgaggaagttccacgcgaacggcacctcgccga 473 |||||| || |||||||||||||| ||||| || | |||||||| Sbjct: 24952 gttgtggccgacgaggaagttccaggcgaaggggatctcgccga 24995
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 313 ctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaaccacggcccgcc 372 ||||| ||||||||| |||||||| ||||||| ||||| |||||||||||||||||| Sbjct: 19396972 ctccttgatccagagctcggcgaagtcgcagttcctgtacctctcgaaccacggcccgcc 19397031 Query: 373 ggacgtgtagtgtatggc 390 ||| |||||||| ||||| Sbjct: 19397032 ggaggtgtagtggatggc 19397049 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 430 gttgtgccccacgaggaagttccacgcgaacggcacctcgccga 473 |||||| || |||||||||||||| ||||| || | |||||||| Sbjct: 19397086 gttgtggccgacgaggaagttccaggcgaaggggatctcgccga 19397129
>dbj|AK103655.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135F01, full insert sequence Length = 1110 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 313 ctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaaccacggcccgcc 372 ||||| ||||||||| |||||||| ||||||| ||||| |||||||||||||||||| Sbjct: 829 ctccttgatccagagctcggcgaagtcgcagttcctgtacctctcgaaccacggcccgcc 770 Query: 373 ggacgtgtagtgtatggc 390 ||| |||||||| ||||| Sbjct: 769 ggaggtgtagtggatggc 752 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 430 gttgtgccccacgaggaagttccacgcgaacggcacctcgccga 473 |||||| || |||||||||||||| ||||| || | |||||||| Sbjct: 715 gttgtggccgacgaggaagttccaggcgaaggggatctcgccga 672
>dbj|AK059344.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-B09, full insert sequence Length = 1035 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 313 ctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaaccacggcccgcc 372 ||||| ||||||||| |||||||| ||||||| ||||| |||||||||||||||||| Sbjct: 760 ctccttgatccagagctcggcgaagtcgcagttcctgtacctctcgaaccacggcccgcc 701 Query: 373 ggacgtgtagtgtatggc 390 ||| |||||||| ||||| Sbjct: 700 ggaggtgtagtggatggc 683 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 430 gttgtgccccacgaggaagttccacgcgaacggcacctcgccga 473 |||||| || |||||||||||||| ||||| || | |||||||| Sbjct: 646 gttgtggccgacgaggaagttccaggcgaaggggatctcgccga 603
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 313 ctcctggatccagaggtcggcgaactcgcagtctttgtacagctcgaaccacggcccgcc 372 ||||| ||||||||| |||||||| ||||||| ||||| |||||||||||||||||| Sbjct: 19408248 ctccttgatccagagctcggcgaagtcgcagttcctgtacctctcgaaccacggcccgcc 19408307 Query: 373 ggacgtgtagtgtatggc 390 ||| |||||||| ||||| Sbjct: 19408308 ggaggtgtagtggatggc 19408325 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 430 gttgtgccccacgaggaagttccacgcgaacggcacctcgccga 473 |||||| || |||||||||||||| ||||| || | |||||||| Sbjct: 19408362 gttgtggccgacgaggaagttccaggcgaaggggatctcgccga 19408405
>ref|XM_385813.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05637.1) partial mRNA Length = 1032 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 236 acagcaactgcagacgatgatg 257 |||||||||||||||||||||| Sbjct: 436 acagcaactgcagacgatgatg 457
>emb|BX813333.7| Mouse DNA sequence from clone RP23-255A6 on chromosome 2, complete sequence Length = 163063 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 146 aaacaagcaaattaaccaacaaaga 170 |||||||||||||||| |||||||| Sbjct: 138494 aaacaagcaaattaactaacaaaga 138470
>emb|AL606962.22| Mouse DNA sequence from clone RP23-29H22 on chromosome 4, complete sequence Length = 223854 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 270 cttccacctcgccttctttctcctc 294 |||||||||| |||||||||||||| Sbjct: 157067 cttccacctctccttctttctcctc 157091
>ref|NM_202942.1| Arabidopsis thaliana unknown protein AT4G32900 transcript variant AT4G32900.2 mRNA, complete cds Length = 840 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 acaagcaaattaaccaacaa 167 |||||||||||||||||||| Sbjct: 780 acaagcaaattaaccaacaa 761
>ref|NM_119443.1| Arabidopsis thaliana unknown protein AT4G32900 transcript variant AT4G32900.1 mRNA, complete cds Length = 862 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 acaagcaaattaaccaacaa 167 |||||||||||||||||||| Sbjct: 788 acaagcaaattaaccaacaa 769
>gb|BC103727.1| Homo sapiens kinesin light chain 4, transcript variant 1, mRNA (cDNA clone MGC:111777 IMAGE:6157949), complete cds Length = 2351 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tcgccttctttctcctccga 297 |||||||||||||||||||| Sbjct: 561 tcgccttctttctcctccga 542
>ref|XM_518486.1| PREDICTED: Pan troglodytes similar to PTK7 protein tyrosine kinase 7 isoform a precursor; colon carcinoma kinase-4; protein-tyrosine kinase PTK7 (LOC462708), mRNA Length = 6377 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tcgccttctttctcctccga 297 |||||||||||||||||||| Sbjct: 971 tcgccttctttctcctccga 952
>gb|BC080637.1| Homo sapiens kinesin light chain 4, transcript variant 1, mRNA (cDNA clone MGC:99549 IMAGE:6573021), complete cds Length = 2361 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tcgccttctttctcctccga 297 |||||||||||||||||||| Sbjct: 563 tcgccttctttctcctccga 544
>gb|BC012357.1| Homo sapiens kinesin light chain 4, transcript variant 4, mRNA (cDNA clone IMAGE:4654235), complete cds Length = 1265 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tcgccttctttctcctccga 297 |||||||||||||||||||| Sbjct: 564 tcgccttctttctcctccga 545
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ggcgcgcggcgcggtcccgc 407 |||||||||||||||||||| Sbjct: 255119 ggcgcgcggcgcggtcccgc 255138
>gb|AC005538.3| Homo sapiens BAC clone RP11-332L11 from 2, complete sequence Length = 193627 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 caaacaagcaaattaaccaacaaa 168 ||||||||||||| |||||||||| Sbjct: 156411 caaacaagcaaataaaccaacaaa 156434
>ref|NM_138343.2| Homo sapiens kinesin light chain 4 (KLC4), transcript variant 4, mRNA Length = 1284 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tcgccttctttctcctccga 297 |||||||||||||||||||| Sbjct: 583 tcgccttctttctcctccga 564
>ref|NM_201523.1| Homo sapiens kinesin light chain 4 (KLC4), transcript variant 3, mRNA Length = 2674 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tcgccttctttctcctccga 297 |||||||||||||||||||| Sbjct: 879 tcgccttctttctcctccga 860
>ref|NM_201522.1| Homo sapiens kinesin light chain 4 (KLC4), transcript variant 2, mRNA Length = 2488 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tcgccttctttctcctccga 297 |||||||||||||||||||| Sbjct: 693 tcgccttctttctcctccga 674
>ref|NM_201521.1| Homo sapiens kinesin light chain 4 (KLC4), transcript variant 1, mRNA Length = 2378 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tcgccttctttctcctccga 297 |||||||||||||||||||| Sbjct: 583 tcgccttctttctcctccga 564
>gb|AC129211.3| Mus musculus BAC clone RP24-348E18 from chromosome 8, complete sequence Length = 167455 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tggatacttggccctcaagg 40 |||||||||||||||||||| Sbjct: 80704 tggatacttggccctcaagg 80685
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 314 tcctggatccagaggtcggcgaac 337 ||||||||||| |||||||||||| Sbjct: 105804 tcctggatccacaggtcggcgaac 105781
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ggcgcgcggcgcggtcccgc 407 |||||||||||||||||||| Sbjct: 779791 ggcgcgcggcgcggtcccgc 779810
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 gtgccttccacctcgccttc 285 |||||||||||||||||||| Sbjct: 29955 gtgccttccacctcgccttc 29974
>emb|AL161582.2|ATCHRIV78 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 78 Length = 198669 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 acaagcaaattaaccaacaa 167 |||||||||||||||||||| Sbjct: 100564 acaagcaaattaaccaacaa 100583
>emb|AL031804.1|ATF26P21 Arabidopsis thaliana DNA chromosome 4, BAC clone F26P21 (ESSA project) Length = 94482 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 acaagcaaattaaccaacaa 167 |||||||||||||||||||| Sbjct: 9868 acaagcaaattaaccaacaa 9887
>emb|BX640717.1|HSM806788 Homo sapiens mRNA; cDNA DKFZp686J01192 (from clone DKFZp686J01192) Length = 2676 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tcgccttctttctcctccga 297 |||||||||||||||||||| Sbjct: 820 tcgccttctttctcctccga 801
>dbj|AK127894.1| Homo sapiens cDNA FLJ46000 fis, clone SMINT2010753, highly similar to Probable kinesin light chain 3 Length = 2373 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tcgccttctttctcctccga 297 |||||||||||||||||||| Sbjct: 596 tcgccttctttctcctccga 577
>dbj|AK127018.1| Homo sapiens cDNA FLJ45074 fis, clone BRAWH3027440, highly similar to Probable kinesin light chain 3 Length = 3604 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tcgccttctttctcctccga 297 |||||||||||||||||||| Sbjct: 1888 tcgccttctttctcctccga 1869
>dbj|AK094102.1| Homo sapiens cDNA FLJ36783 fis, clone ADRGL2001830, moderately similar to KINESIN LIGHT CHAIN Length = 2654 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tcgccttctttctcctccga 297 |||||||||||||||||||| Sbjct: 879 tcgccttctttctcctccga 860
>dbj|AK056393.1| Homo sapiens cDNA FLJ31831 fis, clone NT2RP6000123, moderately similar to KINESIN LIGHT CHAIN Length = 2364 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tcgccttctttctcctccga 297 |||||||||||||||||||| Sbjct: 583 tcgccttctttctcctccga 564
>dbj|AK055293.1| Homo sapiens cDNA FLJ30731 fis, clone FEBRA2000105, moderately similar to KINESIN LIGHT CHAIN Length = 2770 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tcgccttctttctcctccga 297 |||||||||||||||||||| Sbjct: 1001 tcgccttctttctcctccga 982
>emb|BX829060.1|CNS0A4J2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL65ZC03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 778 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 acaagcaaattaaccaacaa 167 |||||||||||||||||||| Sbjct: 717 acaagcaaattaaccaacaa 698
>emb|BX828774.1|CNS0A4J9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL37ZF03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 836 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 acaagcaaattaaccaacaa 167 |||||||||||||||||||| Sbjct: 774 acaagcaaattaaccaacaa 755
>gb|AC159031.1| Pan troglodytes BAC clone CH251-381B17 from chromosome unknown, complete sequence Length = 177940 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 caaacaagcaaattaaccaacaaa 168 ||||||||||||| |||||||||| Sbjct: 83548 caaacaagcaaataaaccaacaaa 83525
>gb|AY089129.1| Arabidopsis thaliana clone 36835 mRNA, complete sequence Length = 862 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 acaagcaaattaaccaacaa 167 |||||||||||||||||||| Sbjct: 788 acaagcaaattaaccaacaa 769
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 gcccacgtccgccgggtcca 425 |||||||||||||||||||| Sbjct: 3451013 gcccacgtccgccgggtcca 3451032
>gb|AE005115.1| Halobacterium sp. NRC-1 section 146 of 170 of the complete genome Length = 14635 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 451 ccacgcgaacggcacctcgccgac 474 ||||||||||| |||||||||||| Sbjct: 7012 ccacgcgaacgccacctcgccgac 7035
>ref|XM_320247.2| Anopheles gambiae str. PEST ENSANGP00000016476 (ENSANGG00000013987), partial mRNA Length = 2064 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gaggaagttccacgcgaacg 461 |||||||||||||||||||| Sbjct: 1557 gaggaagttccacgcgaacg 1538
>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence Length = 412348 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 cacgtccgccgggtccacgc 428 |||||||||||||||||||| Sbjct: 251322 cacgtccgccgggtccacgc 251341
>emb|AL806525.23| Mouse DNA sequence from clone RP23-254N4 on chromosome 4, complete sequence Length = 209356 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 caaacaagcaaattaaccaacaaa 168 ||||||||||||| |||||||||| Sbjct: 132360 caaacaagcaaataaaccaacaaa 132337
>gb|AC172878.1| Brassica rapa subsp. pekinensis clone KBrH069E01, complete sequence Length = 53923 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 caaacaagcaaattaaccaa 164 |||||||||||||||||||| Sbjct: 29370 caaacaagcaaattaaccaa 29389 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,610,699 Number of Sequences: 3902068 Number of extensions: 2610699 Number of successful extensions: 55456 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 53 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 54853 Number of HSP's gapped (non-prelim): 603 length of query: 478 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 456 effective length of database: 17,147,199,772 effective search space: 7819123096032 effective search space used: 7819123096032 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)