>gb|AY104861.1| Zea mays PCO082817 mRNA sequence
          Length = 1190

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 85/99 (85%)
 Strand = Plus / Minus

                                                                       
Query: 309 tctaatgctgcttcttgtccttggacggacccttgggaatcttggacaggcacttctcat 368
           ||||||| ||||||||||| ||  | || ||||| |||||||| || ||||| ||||| |
Sbjct: 868 tctaatgttgcttcttgtcttttaatgggcccttcggaatctttgataggcatttctcgt 809

                                                  
Query: 369 cgaagatggcgtaatacttcttcagttcgaccatggcct 407
           ||||||||||||| ||| ||||||| |||||||||||||
Sbjct: 808 cgaagatggcgtagtacctcttcagctcgaccatggcct 770

>gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1593_C11,
             complete sequence
          Length = 112065

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 66/75 (88%)
 Strand = Plus / Plus

                                                                         
Query: 333   acggacccttgggaatcttggacaggcacttctcatcgaagatggcgtaatacttcttca 392
             ||||||||||||| ||||| || ||||| ||||||||||| || || || ||||||||||
Sbjct: 76782 acggacccttggggatcttagagaggcatttctcatcgaaaatagcatagtacttcttca 76841

                            
Query: 393   gttcgaccatggcct 407
             |||||| ||||||||
Sbjct: 76842 gttcgatcatggcct 76856

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 66/75 (88%)
 Strand = Plus / Plus

                                                                            
Query: 333      acggacccttgggaatcttggacaggcacttctcatcgaagatggcgtaatacttcttca 392
                ||||||||||||| ||||| || ||||| ||||||||||| || || || ||||||||||
Sbjct: 25973655 acggacccttggggatcttagagaggcatttctcatcgaaaatagcatagtacttcttca 25973714

                               
Query: 393      gttcgaccatggcct 407
                |||||| ||||||||
Sbjct: 25973715 gttcgatcatggcct 25973729

>dbj|AK121753.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087P17, full
           insert sequence
          Length = 1106

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                       
Query: 333 acggacccttgggaatcttggacaggcacttctcatcgaagatggcgtaatacttcttca 392
           ||||||||||||| ||||| || ||||| ||||||||||| || || || ||||||||||
Sbjct: 801 acggacccttggggatcttagagaggcatttctcatcgaaaatagcatagtacttcttca 742

                          
Query: 393 gttcgaccatggcct 407
           |||||| ||||||||
Sbjct: 741 gttcgatcatggcct 727

>dbj|AK104245.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-D08, full
           insert sequence
          Length = 1039

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                       
Query: 333 acggacccttgggaatcttggacaggcacttctcatcgaagatggcgtaatacttcttca 392
           ||||||||||||| ||||| || ||||| ||||||||||| || || || ||||||||||
Sbjct: 818 acggacccttggggatcttagagaggcatttctcatcgaaaatagcatagtacttcttca 759

                          
Query: 393 gttcgaccatggcct 407
           |||||| ||||||||
Sbjct: 758 gttcgatcatggcct 744

>gb|AY112460.1| Zea mays CL9078_1 mRNA sequence
          Length = 686

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                      
Query: 338 cccttgggaatcttggacaggcacttctcatcgaagatggcgtaatacttcttcagttc 396
           ||||| |||||||| || ||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 343 ccctttggaatcttcgataggcacttctcatcgaaaatggcataatacttcttcagttc 401

>dbj|AK061354.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-G11, full
           insert sequence
          Length = 1138

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 65/75 (86%)
 Strand = Plus / Minus

                                                                       
Query: 333 acggacccttgggaatcttggacaggcacttctcatcgaagatggcgtaatacttcttca 392
           ||||||||| ||| ||||| || ||||| ||||||||||| || || || ||||||||||
Sbjct: 843 acggaccctcggggatcttagagaggcatttctcatcgaaaatagcatagtacttcttca 784

                          
Query: 393 gttcgaccatggcct 407
           |||||| ||||||||
Sbjct: 783 gttcgatcatggcct 769

>ref|XM_507601.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0033D24.25
            mRNA
          Length = 1524

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 82   atattacaccaacacaacttgcaagt 107
            ||||||||||||||||||||||||||
Sbjct: 1463 atattacaccaacacaacttgcaagt 1438

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                          
Query: 82       atattacaccaacacaacttgcaagt 107
                ||||||||||||||||||||||||||
Sbjct: 26763032 atattacaccaacacaacttgcaagt 26763007

>dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0033D24
          Length = 186132

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                        
Query: 82     atattacaccaacacaacttgcaagt 107
              ||||||||||||||||||||||||||
Sbjct: 106374 atattacaccaacacaacttgcaagt 106349

>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0665C04
          Length = 177054

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                       
Query: 82    atattacaccaacacaacttgcaagt 107
             ||||||||||||||||||||||||||
Sbjct: 25822 atattacaccaacacaacttgcaagt 25797

>dbj|AK068776.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160K11, full
            insert sequence
          Length = 1524

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 82   atattacaccaacacaacttgcaagt 107
            ||||||||||||||||||||||||||
Sbjct: 1463 atattacaccaacacaacttgcaagt 1438

>ref|NM_191117.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 762

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 335 ggacccttgggaatcttggacaggcacttctcatcgaagatggcgtaatacttctt 390
           ||||||||||||||||| || ||||| ||||| || |||| ||| || ||||||||
Sbjct: 740 ggacccttgggaatcttcgataggcatttctcttcaaagagggcatagtacttctt 685

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                        
Query: 335      ggacccttgggaatcttggacaggcacttctcatcgaagatggcgtaatacttctt 390
                ||||||||||||||||| || ||||| ||||| || |||| ||| || ||||||||
Sbjct: 30733527 ggacccttgggaatcttcgataggcatttctcttcaaagagggcatagtacttctt 30733472

>dbj|AP003218.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0021A09
          Length = 127973

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                     
Query: 335   ggacccttgggaatcttggacaggcacttctcatcgaagatggcgtaatacttctt 390
             ||||||||||||||||| || ||||| ||||| || |||| ||| || ||||||||
Sbjct: 22802 ggacccttgggaatcttcgataggcatttctcttcaaagagggcatagtacttctt 22747

>dbj|AK121245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099G09, full
           insert sequence
          Length = 1325

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 335 ggacccttgggaatcttggacaggcacttctcatcgaagatggcgtaatacttctt 390
           ||||||||||||||||| || ||||| ||||| || |||| ||| || ||||||||
Sbjct: 874 ggacccttgggaatcttcgataggcatttctcttcaaagagggcatagtacttctt 819

>dbj|AK065226.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H02, full
           insert sequence
          Length = 1181

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 335 ggacccttgggaatcttggacaggcacttctcatcgaagatggcgtaatacttctt 390
           ||||||||||||||||| || ||||| ||||| || |||| ||| || ||||||||
Sbjct: 865 ggacccttgggaatcttcgataggcatttctcttcaaagagggcatagtacttctt 810

>dbj|AK062151.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-H05, full
           insert sequence
          Length = 731

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 335 ggacccttgggaatcttggacaggcacttctcatcgaagatggcgtaatacttctt 390
           ||||||||||||||||| || ||||| ||||| || |||| ||| || ||||||||
Sbjct: 385 ggacccttgggaatcttcgataggcatttctcttcaaagagggcatagtacttctt 330

>ref|XM_658649.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6137.2), mRNA
          Length = 2346

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 275  tgaagataaatctgcgcagggtaatctcta 304
            ||||||| |||||||||| |||||||||||
Sbjct: 2316 tgaagatcaatctgcgcaaggtaatctcta 2345

>gb|AC087556.30| Mus musculus strain C57BL/6J chromosome 16 clone rp23-123l9, complete
             sequence
          Length = 219730

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 226   atcacaagttcacgaccatccttgaa 251
             |||||||||||||| |||||||||||
Sbjct: 48686 atcacaagttcacggccatccttgaa 48661

>gb|AC116736.14| Mus musculus chromosome 3, clone RP23-370O17, complete sequence
          Length = 180168

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 226    atcacaagttcacgaccatccttga 250
              |||||||||||| ||||||||||||
Sbjct: 107165 atcacaagttcaagaccatccttga 107189

>gb|BC063719.1| Xenopus laevis hypothetical protein MGC68665, mRNA (cDNA clone
            MGC:68665 IMAGE:4032810), complete cds
          Length = 6579

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 265  tgatcaactttgaagataaa 284
            ||||||||||||||||||||
Sbjct: 5558 tgatcaactttgaagataaa 5539

>gb|AC138638.11| Mus musculus chromosome 8, clone RP23-380M21, complete sequence
          Length = 168821

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 218 gacatggaatcacaagttca 237
           ||||||||||||||||||||
Sbjct: 597 gacatggaatcacaagttca 578

>gb|AC144859.3| Mus musculus BAC clone RP24-158C2 from chromosome 5, complete sequence
          Length = 170762

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    cccaggaatgatgacacacc 29
             ||||||||||||||||||||
Sbjct: 90867 cccaggaatgatgacacacc 90848

>emb|BX323598.9| Zebrafish DNA sequence from clone CH211-196M2 in linkage group 18,
              complete sequence
          Length = 197329

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 300    ctctactggtctaatgctgc 319
              ||||||||||||||||||||
Sbjct: 129151 ctctactggtctaatgctgc 129170

>gb|AC153537.4| Mus musculus 10 BAC RP23-283A2 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 221267

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 24   cacaccccaagagccacttc 43
            ||||||||||||||||||||
Sbjct: 9014 cacaccccaagagccacttc 9033

>emb|BX950194.9| Zebrafish DNA sequence from clone CH211-218C6 in linkage group 18,
             complete sequence
          Length = 122061

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   ctctactggtctaatgctgc 319
             ||||||||||||||||||||
Sbjct: 86344 ctctactggtctaatgctgc 86325

>gb|AC153422.5| Mus musculus 10 BAC RP23-427I15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 197906

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     cacaccccaagagccacttc 43
              ||||||||||||||||||||
Sbjct: 175741 cacaccccaagagccacttc 175760

>gb|AC102210.6| Mus musculus chromosome 8, clone RP24-351F4, complete sequence
          Length = 165443

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 218   gacatggaatcacaagttca 237
             ||||||||||||||||||||
Sbjct: 78941 gacatggaatcacaagttca 78960


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,886,603
Number of Sequences: 3902068
Number of extensions: 2886603
Number of successful extensions: 50427
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50356
Number of HSP's gapped (non-prelim): 71
length of query: 407
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 385
effective length of database: 17,147,199,772
effective search space: 6601671912220
effective search space used: 6601671912220
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)