ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart08e09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AF250935.1|AF250935 Hordeum vulgare germin F (GerF) gene, com... 206 1e-50
2gb|AF250934.1|AF250934 Hordeum vulgare germin B (GerB) gene, com... 196 1e-47
3gb|AC095059.3| Homo sapiens BAC clone RP11-428L21 from 4, comple... 40 1.7
4emb|AL662835.11| Mouse DNA sequence from clone RP23-458A23 on ch... 40 1.7
5gb|AC091728.2| Bos taurus clone RP42-99M11, complete sequence 38 6.8
6gb|AC089992.2| Bos taurus clone RP42-210F11, complete sequence 38 6.8
7gb|DP000008.1| Bos taurus target 1 genomic scaffold 38 6.8
8gb|AC156937.4| Mus musculus BAC clone RP23-355I5 from chromosome... 38 6.8
9gb|AC092031.4| Homo sapiens BAC clone RP11-660M7 from 7, complet... 38 6.8
10emb|AL365259.23| Human DNA sequence from clone RP11-624M8 on chr... 38 6.8
11emb|CR759830.8| Zebrafish DNA sequence from clone DKEYP-79F12 in... 38 6.8
12gb|AC131053.2| Homo sapiens chromosome 18, clone RP11-348G23, co... 38 6.8
13gb|U04968.1|CGXPD2 Cricetulus griseus nucleotide excision repair... 38 6.8
14gb|AC114401.2| Homo sapiens chromosome 3 clone RP11-85I21, compl... 38 6.8
15gb|AC113169.2| Homo sapiens chromosome 3 clone RP11-322K13, comp... 38 6.8
16emb|BX530074.13| Zebrafish DNA sequence from clone DKEY-266K15 i... 38 6.8
17gb|AC099848.2| Homo sapiens chromosome 18, clone RP11-856F24, co... 38 6.8
18dbj|AB242159.1| Human astrovirus ORF1a gene for putative serine ... 38 6.8
19dbj|AB242158.1| Human astrovirus ORF1a gene for putative serine ... 38 6.8
20dbj|AB211059.1| Human astrovirus 8 orf 1a gene for nonstructural... 38 6.8
21gb|AC107943.4| Homo sapiens chromosome 8, clone RP11-11I1, compl... 38 6.8
22gb|AF095911.2|AF095911 Anolis carolinensis estrogen receptor lig... 38 6.8
23gb|AC018695.6| Homo sapiens BAC clone RP11-568J23 from 16, compl... 38 6.8
24gb|AC011835.8| Homo sapiens chromosome 8, clone RP11-143D15, com... 38 6.8
25gb|AC016065.14| Homo sapiens chromosome 8, clone RP11-115C21, co... 38 6.8
26emb|BX001037.13| Zebrafish DNA sequence from clone DKEY-107I16 i... 38 6.8
27gb|AF141381.1|AF141381 Human astrovirus putative serine protease... 38 6.8
28gb|AC025679.4|AC025679 Homo sapiens chromosome 18, clone RP11-38... 38 6.8
29dbj|AK047535.1| Mus musculus 10 days neonate cerebellum cDNA, RI... 38 6.8
30gb|AC009068.10|AC009068 Homo sapiens chromosome 16 clone RP11-31... 38 6.8
31dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 38 6.8
32gb|AC133065.3| Homo sapiens chromosome 16 clone RP11-876N24, com... 38 6.8
33gb|AC080014.13| Homo sapiens 3 BAC RP11-301G23 (Roswell Park Can... 38 6.8
34dbj|AB194280.1| Human astrovirus type 8 ORF1a gene for putative ... 38 6.8
35dbj|AB191789.1| Human astrovirus type 8 ORF1a gene for putative ... 38 6.8
36dbj|AB126674.1| Human astrovirus type 8 orf1a gene for non-struc... 38 6.8
37dbj|AB126673.1| Human astrovirus type 8 orf1a gene for non-struc... 38 6.8
38dbj|AB126672.1| Human astrovirus type 8 orf1a gene for non-struc... 38 6.8
39dbj|AB126671.1| Human astrovirus type 8 orf1a gene for non-struc... 38 6.8
40dbj|AB126670.1| Human astrovirus type 8 orf1a gene for non-struc... 38 6.8
41dbj|AB116554.1| Human astrovirus type 8 orf 1a gene for non-stru... 38 6.8
42gb|AY962542.1| Human astrovirus isolate 5-158 Orf1a gene, partia... 38 6.8
43dbj|AP006162.2| Oryza sativa (japonica cultivar-group) genomic D... 38 6.8
44emb|CT573085.6| Mouse DNA sequence from clone RP23-436A20 on chr... 38 6.8
45emb|BX004985.6| Mouse DNA sequence from clone RP23-320O16 on chr... 38 6.8
46emb|BX322585.4| Mouse DNA sequence from clone RP23-286C17 on chr... 38 6.8
47emb|AL935173.9| Zebrafish DNA sequence from clone CH211-196D9, c... 38 6.8
48gb|AC126054.5| Mus musculus BAC clone RP23-298O13 from 8, comple... 38 6.8

>gb|AF250935.1|AF250935 Hordeum vulgare germin F (GerF) gene, complete cds
          Length = 2689

 Score =  206 bits (104), Expect = 1e-50
 Identities = 119/124 (95%)
 Strand = Plus / Minus

                                                                        
Query: 12   cattgctgctttggcattaacatcacggatctctctatatcagcaacaagggaaaggagc 71
            ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2664 cattgctgctttgtcattaacatcacggatctctctatatcagcaacaaggcaaaggagc 2605

                                                                        
Query: 72   acctctgcattcccttcattaaacagggaaaacaatcatcaccaacacattctgacatga 131
            ||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2604 acctctgtattccattcattaaacagtgaaaacaatcatcaccaacacattctgacatga 2545

                
Query: 132  atcc 135
            ||||
Sbjct: 2544 atcc 2541



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>gb|AF250934.1|AF250934 Hordeum vulgare germin B (GerB) gene, complete cds
          Length = 2798

 Score =  196 bits (99), Expect = 1e-47
 Identities = 117/123 (95%)
 Strand = Plus / Minus

                                                                        
Query: 12   cattgctgctttggcattaacatcacggatctctctatatcagcaacaagggaaaggagc 71
            ||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 2773 cattgctgctttgtcattaacatcacggatctctctatatcagcaaaaaggcaaaggagc 2714

                                                                        
Query: 72   acctctgcattcccttcattaaacagggaaaacaatcatcaccaacacattctgacatga 131
            ||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2713 acctctgtattccattcattaaacagtgaaaacaatcatcaccaacacattctgacatga 2654

               
Query: 132  atc 134
            |||
Sbjct: 2653 atc 2651



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>gb|AC095059.3| Homo sapiens BAC clone RP11-428L21 from 4, complete sequence
          Length = 109586

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    tctctatatcagcaacaagg 62
             ||||||||||||||||||||
Sbjct: 94642 tctctatatcagcaacaagg 94623



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>emb|AL662835.11| Mouse DNA sequence from clone RP23-458A23 on chromosome 11, complete
             sequence
          Length = 162024

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    gcattcccttcattaaacag 97
             ||||||||||||||||||||
Sbjct: 49637 gcattcccttcattaaacag 49618



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>gb|AC091728.2| Bos taurus clone RP42-99M11, complete sequence
          Length = 162743

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 120    attctgacatgaatcccac 138
              |||||||||||||||||||
Sbjct: 137478 attctgacatgaatcccac 137496



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>gb|AC089992.2| Bos taurus clone RP42-210F11, complete sequence
          Length = 147922

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 120  attctgacatgaatcccac 138
            |||||||||||||||||||
Sbjct: 6472 attctgacatgaatcccac 6490



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>gb|DP000008.1| Bos taurus target 1 genomic scaffold
          Length = 2072671

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 120     attctgacatgaatcccac 138
               |||||||||||||||||||
Sbjct: 1234645 attctgacatgaatcccac 1234663



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>gb|AC156937.4| Mus musculus BAC clone RP23-355I5 from chromosome 8, complete sequence
          Length = 198479

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 107    tcatcaccaacacattctg 125
              |||||||||||||||||||
Sbjct: 189597 tcatcaccaacacattctg 189615



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>gb|AC092031.4| Homo sapiens BAC clone RP11-660M7 from 7, complete sequence
          Length = 99374

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 1    ggaaggcccaacattgctg 19
            |||||||||||||||||||
Sbjct: 9514 ggaaggcccaacattgctg 9496



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>emb|AL365259.23| Human DNA sequence from clone RP11-624M8 on chromosome 6 Contains
            part of a novel gene, complete sequence
          Length = 106607

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 125  gacatgaatcccaccaaaa 143
            |||||||||||||||||||
Sbjct: 6567 gacatgaatcccaccaaaa 6549



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>emb|CR759830.8| Zebrafish DNA sequence from clone DKEYP-79F12 in linkage group 23,
             complete sequence
          Length = 196033

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 116   acacattctgacatgaatcccac 138
             |||||| ||||||||||||||||
Sbjct: 85611 acacatcctgacatgaatcccac 85589



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>gb|AC131053.2| Homo sapiens chromosome 18, clone RP11-348G23, complete sequence
          Length = 191115

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 69     agcacctctgcattccctt 87
              |||||||||||||||||||
Sbjct: 129349 agcacctctgcattccctt 129331



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>gb|U04968.1|CGXPD2 Cricetulus griseus nucleotide excision repair protein gene, exons
            3-23 and complete cds
          Length = 13664

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 106  atcatcaccaacacattct 124
            |||||||||||||||||||
Sbjct: 1846 atcatcaccaacacattct 1828



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>gb|AC114401.2| Homo sapiens chromosome 3 clone RP11-85I21, complete sequence
          Length = 172671

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 123   ctgacatgaatcccaccaa 141
             |||||||||||||||||||
Sbjct: 92734 ctgacatgaatcccaccaa 92716



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>gb|AC113169.2| Homo sapiens chromosome 3 clone RP11-322K13, complete sequence
          Length = 174293

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 123  ctgacatgaatcccaccaa 141
            |||||||||||||||||||
Sbjct: 9977 ctgacatgaatcccaccaa 9959



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>emb|BX530074.13| Zebrafish DNA sequence from clone DKEY-266K15 in linkage group 23,
              complete sequence
          Length = 124070

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 116    acacattctgacatgaatcccac 138
              |||||| ||||||||||||||||
Sbjct: 104145 acacatcctgacatgaatcccac 104167



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>gb|AC099848.2| Homo sapiens chromosome 18, clone RP11-856F24, complete sequence
          Length = 132288

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 69    agcacctctgcattccctt 87
             |||||||||||||||||||
Sbjct: 63436 agcacctctgcattccctt 63418



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>dbj|AB242159.1| Human astrovirus ORF1a gene for putative serine protease, partial
          cds, isolate:India/V959/2003
          Length = 289

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 26 cattaacatcacggatctc 44
          |||||||||||||||||||
Sbjct: 90 cattaacatcacggatctc 72



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>dbj|AB242158.1| Human astrovirus ORF1a gene for putative serine protease, partial
          cds, isolate:India/V913/2002
          Length = 289

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 26 cattaacatcacggatctc 44
          |||||||||||||||||||
Sbjct: 90 cattaacatcacggatctc 72



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>dbj|AB211059.1| Human astrovirus 8 orf 1a gene for nonstructural protein, partial
          cds
          Length = 289

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 26 cattaacatcacggatctc 44
          |||||||||||||||||||
Sbjct: 90 cattaacatcacggatctc 72



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>gb|AC107943.4| Homo sapiens chromosome 8, clone RP11-11I1, complete sequence
          Length = 195110

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 98     ggaaaacaatcatcaccaacacattct 124
              |||||||||||| ||| ||||||||||
Sbjct: 148052 ggaaaacaatcaacacaaacacattct 148026



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>gb|AF095911.2|AF095911 Anolis carolinensis estrogen receptor ligand binding domain mRNA,
           partial cds
          Length = 1302

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 53  agcaacaagggaaaggagcacct 75
           ||||||||||||| |||||||||
Sbjct: 816 agcaacaagggaatggagcacct 838



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>gb|AC018695.6| Homo sapiens BAC clone RP11-568J23 from 16, complete sequence
          Length = 211001

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 74    ctctgcattcccttcatta 92
             |||||||||||||||||||
Sbjct: 85463 ctctgcattcccttcatta 85445



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>gb|AC011835.8| Homo sapiens chromosome 8, clone RP11-143D15, complete sequence
          Length = 182151

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 98     ggaaaacaatcatcaccaacacattct 124
              |||||||||||| ||| ||||||||||
Sbjct: 170537 ggaaaacaatcaacacaaacacattct 170563



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>gb|AC016065.14| Homo sapiens chromosome 8, clone RP11-115C21, complete sequence
          Length = 185463

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 98     ggaaaacaatcatcaccaacacattct 124
              |||||||||||| ||| ||||||||||
Sbjct: 145158 ggaaaacaatcaacacaaacacattct 145184



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>emb|BX001037.13| Zebrafish DNA sequence from clone DKEY-107I16 in linkage group 6,
             complete sequence
          Length = 92347

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 82    tcccttcattaaacaggga 100
             |||||||||||||||||||
Sbjct: 64778 tcccttcattaaacaggga 64796



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>gb|AF141381.1|AF141381 Human astrovirus putative serine protease gene, complete cds;
            putative RNA-dependent RNA polymerase gene, partial cds;
            and capsid precursor protein gene, complete cds
          Length = 6815

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 26   cattaacatcacggatctc 44
            |||||||||||||||||||
Sbjct: 1271 cattaacatcacggatctc 1253



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>gb|AC025679.4|AC025679 Homo sapiens chromosome 18, clone RP11-383C19, complete sequence
          Length = 166937

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 69    agcacctctgcattccctt 87
             |||||||||||||||||||
Sbjct: 30730 agcacctctgcattccctt 30748



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>dbj|AK047535.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:B930086B02
            product:unclassifiable, full insert sequence
          Length = 2917

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 107  tcatcaccaacacattctg 125
            |||||||||||||||||||
Sbjct: 1308 tcatcaccaacacattctg 1290



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>gb|AC009068.10|AC009068 Homo sapiens chromosome 16 clone RP11-314K3, complete sequence
          Length = 160356

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 74     ctctgcattcccttcatta 92
              |||||||||||||||||||
Sbjct: 147148 ctctgcattcccttcatta 147130



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 100      aaaacaatcatcaccaaca 118
                |||||||||||||||||||
Sbjct: 22556690 aaaacaatcatcaccaaca 22556672



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>gb|AC133065.3| Homo sapiens chromosome 16 clone RP11-876N24, complete sequence
          Length = 142215

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 92    aaacagggaaaacaatcat 110
             |||||||||||||||||||
Sbjct: 38480 aaacagggaaaacaatcat 38462



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>gb|AC080014.13| Homo sapiens 3 BAC RP11-301G23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 163111

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 78    gcattcccttcattaaaca 96
             |||||||||||||||||||
Sbjct: 92691 gcattcccttcattaaaca 92709



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>dbj|AB194280.1| Human astrovirus type 8 ORF1a gene for putative serine protease,
          partial cds, isolate: V1347
          Length = 289

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 26 cattaacatcacggatctc 44
          |||||||||||||||||||
Sbjct: 90 cattaacatcacggatctc 72



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>dbj|AB191789.1| Human astrovirus type 8 ORF1a gene for putative serine protease,
          partial cds
          Length = 289

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 26 cattaacatcacggatctc 44
          |||||||||||||||||||
Sbjct: 90 cattaacatcacggatctc 72



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>dbj|AB126674.1| Human astrovirus type 8 orf1a gene for non-structural protein,
          partial cds, strain:I/V834/2002
          Length = 289

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 26 cattaacatcacggatctc 44
          |||||||||||||||||||
Sbjct: 90 cattaacatcacggatctc 72



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>dbj|AB126673.1| Human astrovirus type 8 orf1a gene for non-structural protein,
          partial cds, strain:I/V814/2002
          Length = 289

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 26 cattaacatcacggatctc 44
          |||||||||||||||||||
Sbjct: 90 cattaacatcacggatctc 72



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>dbj|AB126672.1| Human astrovirus type 8 orf1a gene for non-structural protein,
          partial cds, strain:I/V813/2002
          Length = 289

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 26 cattaacatcacggatctc 44
          |||||||||||||||||||
Sbjct: 90 cattaacatcacggatctc 72



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>dbj|AB126671.1| Human astrovirus type 8 orf1a gene for non-structural protein,
          partial cds, strain:I/V782/2002
          Length = 289

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 26 cattaacatcacggatctc 44
          |||||||||||||||||||
Sbjct: 90 cattaacatcacggatctc 72



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>dbj|AB126670.1| Human astrovirus type 8 orf1a gene for non-structural protein,
          partial cds, strain:I/V770/2002
          Length = 242

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 26 cattaacatcacggatctc 44
          |||||||||||||||||||
Sbjct: 90 cattaacatcacggatctc 72



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>dbj|AB116554.1| Human astrovirus type 8 orf 1a gene for non-structural protein,
          partial cds
          Length = 289

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 26 cattaacatcacggatctc 44
          |||||||||||||||||||
Sbjct: 90 cattaacatcacggatctc 72



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>gb|AY962542.1| Human astrovirus isolate 5-158 Orf1a gene, partial cds
          Length = 251

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 26 cattaacatcacggatctc 44
          |||||||||||||||||||
Sbjct: 52 cattaacatcacggatctc 34



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>dbj|AP006162.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1331F11
          Length = 132205

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 100   aaaacaatcatcaccaaca 118
             |||||||||||||||||||
Sbjct: 71891 aaaacaatcatcaccaaca 71873



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>emb|CT573085.6| Mouse DNA sequence from clone RP23-436A20 on chromosome 13, complete
             sequence
          Length = 186441

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 9     caacattgctgctttggca 27
             |||||||||||||||||||
Sbjct: 54934 caacattgctgctttggca 54916



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>emb|BX004985.6| Mouse DNA sequence from clone RP23-320O16 on chromosome 2, complete
              sequence
          Length = 208765

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 9      caacattgctgctttggca 27
              |||||||||||||||||||
Sbjct: 130593 caacattgctgctttggca 130611



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>emb|BX322585.4| Mouse DNA sequence from clone RP23-286C17 on chromosome 2, complete
            sequence
          Length = 13008

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 123  ctgacatgaatcccaccaa 141
            |||||||||||||||||||
Sbjct: 8870 ctgacatgaatcccaccaa 8852



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>emb|AL935173.9| Zebrafish DNA sequence from clone CH211-196D9, complete sequence
          Length = 205213

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 81    ttcccttcattaaacaggg 99
             |||||||||||||||||||
Sbjct: 43153 ttcccttcattaaacaggg 43135



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>gb|AC126054.5| Mus musculus BAC clone RP23-298O13 from 8, complete sequence
          Length = 233117

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 107    tcatcaccaacacattctg 125
              |||||||||||||||||||
Sbjct: 158137 tcatcaccaacacattctg 158119


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,451,241
Number of Sequences: 3902068
Number of extensions: 1451241
Number of successful extensions: 102699
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102607
Number of HSP's gapped (non-prelim): 92
length of query: 143
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 122
effective length of database: 17,151,101,840
effective search space: 2092434424480
effective search space used: 2092434424480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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