ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart08e06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | RECX_BACHK (Q6HNU0) Regulatory protein recX | 30 | 2.3 | 2 | RECX_BACCZ (Q63GC6) Regulatory protein recX | 30 | 2.3 | 3 | RECX_BACC1 (Q73DY9) Regulatory protein recX | 30 | 2.3 | 4 | RECX_BACAN (Q81YW4) Regulatory protein recX | 30 | 2.3 | 5 | RECX_BACCR (Q81I97) Regulatory protein recX | 29 | 3.0 |
|---|
>RECX_BACHK (Q6HNU0) Regulatory protein recX| Length = 270 Score = 29.6 bits (65), Expect = 2.3 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = +2 Query: 38 ILYTAKQSNCNKWDPGPL*TNQALYGAVDLLICHSLE 148 ILYT QSN N+ P + G DL+I HSL+ Sbjct: 118 ILYTRTQSNVNRKGPTVIKRELLNKGVQDLIIMHSLQ 154
>RECX_BACCZ (Q63GC6) Regulatory protein recX| Length = 270 Score = 29.6 bits (65), Expect = 2.3 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = +2 Query: 38 ILYTAKQSNCNKWDPGPL*TNQALYGAVDLLICHSLE 148 ILYT QSN N+ P + G DL+I HSL+ Sbjct: 118 ILYTRTQSNVNRKGPTVIKRELLNKGVQDLIITHSLQ 154
>RECX_BACC1 (Q73DY9) Regulatory protein recX| Length = 270 Score = 29.6 bits (65), Expect = 2.3 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = +2 Query: 38 ILYTAKQSNCNKWDPGPL*TNQALYGAVDLLICHSLE 148 ILYT QSN N+ P + G DL+I HSL+ Sbjct: 118 ILYTRTQSNVNRKGPTVIKRELLNKGVQDLIITHSLQ 154
>RECX_BACAN (Q81YW4) Regulatory protein recX| Length = 270 Score = 29.6 bits (65), Expect = 2.3 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = +2 Query: 38 ILYTAKQSNCNKWDPGPL*TNQALYGAVDLLICHSLE 148 ILYT QSN N+ P + G DL+I HSL+ Sbjct: 118 ILYTRTQSNVNRKGPTVIKRELLNKGVQDLIIMHSLQ 154
>RECX_BACCR (Q81I97) Regulatory protein recX| Length = 270 Score = 29.3 bits (64), Expect = 3.0 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = +2 Query: 38 ILYTAKQSNCNKWDPGPL*TNQALYGAVDLLICHSLE 148 +LYT QSN N+ P + G DL+I HSL+ Sbjct: 118 VLYTRTQSNVNRKGPTVIKRELLNKGVQDLIITHSLQ 154 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,145,462 Number of Sequences: 219361 Number of extensions: 431735 Number of successful extensions: 1073 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1069 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1073 length of database: 80,573,946 effective HSP length: 37 effective length of database: 72,457,589 effective search space used: 1738982136 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
