ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart08e02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY228552.1| Hordeum vulgare agmatine coumaroyltransferase (AC... 769 0.0
2gb|AY234333.1| Triticum aestivum putative agmatine coumaroyltran... 450 e-123
3ref|XM_474243.1| Oryza sativa (japonica cultivar-group), predic... 347 2e-92
4emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4,... 347 2e-92
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 347 2e-92
6dbj|AK109743.1| Oryza sativa (japonica cultivar-group) cDNA clon... 347 2e-92
7ref|XM_474244.1| Oryza sativa (japonica cultivar-group), predic... 297 2e-77
8ref|XM_469315.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.092
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.092
10gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 geno... 46 0.092
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.092
12emb|AL365215.23| Human DNA sequence from clone RP11-416D8 on chr... 42 1.4
13emb|BX027057.1|CNS08T1H Single read from an extremity of a full-... 42 1.4
14emb|BX284752.1|NCB23B10 Neurospora crassa DNA linkage group II B... 42 1.4
15emb|BX546502.7| Zebrafish DNA sequence from clone RP71-62P22 in ... 42 1.4
16ref|XM_315590.2| Anopheles gambiae str. PEST ENSANGP00000017720 ... 42 1.4
17ref|XM_633465.1| Dictyostelium discoideum hypothetical protein (... 40 5.7
18gb|AF025467.1| Caenorhabditis elegans cosmid R148, complete sequ... 40 5.7
19gb|AC144673.3| Mus musculus BAC clone RP23-40K14 from chromosome... 40 5.7
20gb|AE007288.1| Sinorhizobium meliloti 1021 plasmid pSymA section... 40 5.7
21gb|AY577002.1| Danio rerio clone RZ150A4A11 C22orf4-like protein... 40 5.7
22emb|AJ231133.1|SOF231133 Saccharum officinarum mRNA for caffeic ... 40 5.7
23gb|AY365419.1| Saccharum hybrid cultivar caffeic acid 3-O-methyl... 40 5.7
24gb|U13072.1| Caenorhabditis elegans cosmid C07D10, complete sequ... 40 5.7
25ref|NM_181961.1| Caenorhabditis elegans R148.5b (R148.5) mRNA, c... 40 5.7
26ref|NM_065264.3| Caenorhabditis elegans R148.5a (R148.5) mRNA, c... 40 5.7
27ref|NM_214799.1| Danio rerio zgc:101677 (zgc:101677), mRNA 40 5.7
28dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
29dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
30dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
31dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
32gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
33emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb... 40 5.7
34emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.7
35dbj|AP003385.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 5.7

>gb|AY228552.1| Hordeum vulgare agmatine coumaroyltransferase (ACT) mRNA, complete
            cds
          Length = 1508

 Score =  769 bits (388), Expect = 0.0
 Identities = 415/424 (97%)
 Strand = Plus / Minus

                                                                        
Query: 1    gaaagattaaaacttcgtttatttactcttcccaaacagaatggataattgaatcaagaa 60
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1472 gaaagattaaaacttcgtttatttactcttccaaaacagaatggataattgaatcaagaa 1413

                                                                        
Query: 61   cttcaaaaatagaactaggcaagtggctaacgttgatccgacaccaggcacacattggca 120
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1412 cttcaaaaataaaactaggcaagtggctaacgttgatccgacaccaggcacacattggca 1353

                                                                        
Query: 121  catggcaggtacgtgcaaacgggacctagtcgaggctgtagcaacggttcttgaaggtgt 180
            ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 1352 catggcaggtacgtgcaaacgggacctagtcgaggctgtagcagcagttcttgaaggtgt 1293

                                                                        
Query: 181  tcatgtcgcggctaaagagtggcacgtaggcgtccacgctgccgtcgcccaagaaagacg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1292 tcatgtcgcggctaaagagtggcacgtaggcgtccacgctgccgtcgcccaagaaagacg 1233

                                                                        
Query: 241  gcagcaggatgagcagaccctccaccggcaggtagctgggcatgaagaagaatggccgcc 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1232 gcagcaggatgagcagaccctccaccggcaggtagctgggcatgaagaagaatggccgcc 1173

                                                                        
Query: 301  cgccgcccaagtccatgtcgtaaaaagggatccgcagcccgctgtccacctcgatgttgg 360
            ||||||| |||||||||||||| || |||||| |||||| ||||||||||||||||||||
Sbjct: 1172 cgccgccgaagtccatgtcgtagaacgggatcagcagccagctgtccacctcgatgttgg 1113

                                                                        
Query: 361  ggctcagcaccatgtccgccgcgtcggccgtcgccaccagccgctccttctccaccgcgc 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1112 ggctcagcaccatgtccgccgcgtcggccgtcgccaccagccgctccttctccaccgcgc 1053

                
Query: 421  cgga 424
            ||||
Sbjct: 1052 cgga 1049



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>gb|AY234333.1| Triticum aestivum putative agmatine coumaroyltransferase mRNA,
            partial cds
          Length = 1220

 Score =  450 bits (227), Expect = e-123
 Identities = 310/335 (92%), Gaps = 2/335 (0%)
 Strand = Plus / Minus

                                                                        
Query: 90   acgttgatccgacaccaggcacacattggcacatggcaggtacgtgcaaacgggacctag 149
            |||| |||||||||||| ||||||||| |||| |||||||||||| ||| ||| | ||||
Sbjct: 1116 acgtcgatccgacaccacgcacacatttgcacttggcaggtacgt-caagcgg-agctag 1059

                                                                        
Query: 150  tcgaggctgtagcaacggttcttgaaggtgttcatgtcgcggctaaagagtggcacgtag 209
            |||||| ||||||| | ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1058 tcgagggtgtagcagcagttcttgaaagtgttcatgtcgcggctaaagagtggcacgtag 999

                                                                        
Query: 210  gcgtccacgctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggc 269
            ||| |||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||
Sbjct: 998  gcgcccacgctgccgtcgcccaagaaggacggtagcaggatgagcaggccctccaccggc 939

                                                                        
Query: 270  aggtagctgggcatgaagaagaatggccgcccgccgcccaagtccatgtcgtaaaaaggg 329
            ||||||||||||||||||||||| ||||| |||||||| | |||||||||||| || |||
Sbjct: 938  aggtagctgggcatgaagaagaagggccggccgccgccgaggtccatgtcgtagaacggg 879

                                                                        
Query: 330  atccgcagcccgctgtccacctcgatgttggggctcagcaccatgtccgccgcgtcggcc 389
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878  atccgcagccagctgtccacctcgatgttggggctcagcaccatgtccgccgcgtcggcc 819

                                               
Query: 390  gtcgccaccagccgctccttctccaccgcgccgga 424
            |||||||||||||| ||||||||||||| ||||||
Sbjct: 818  gtcgccaccagccgttccttctccaccgtgccgga 784



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                  
Query: 47   aattgaatcaagaacttcaaaaatagaactaggcaagt 84
            ||||||||||||||||||||||||| ||||||||||||
Sbjct: 1188 aattgaatcaagaacttcaaaaatacaactaggcaagt 1151



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>ref|XM_474243.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1293

 Score =  347 bits (175), Expect = 2e-92
 Identities = 244/267 (91%)
 Strand = Plus / Minus

                                                                        
Query: 158  gtagcaacggttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccac 217
            |||||| | ||||||||||  || |||||||||||| |||||||||||||| ||||| ||
Sbjct: 1257 gtagcagcagttcttgaagacgtccatgtcgcggctgaagagtggcacgtacgcgtcaac 1198

                                                                        
Query: 218  gctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagct 277
            ||| |||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 1197 gctcccgtcgccgaagaaagacggcagcaggatgagcaaaccttccaccggcaggtagct 1138

                                                                        
Query: 278  gggcatgaagaagaatggccgcccgccgcccaagtccatgtcgtaaaaagggatccgcag 337
            |||||||||||||||||||||||||||||| ||||| | |||||| || |||||||||||
Sbjct: 1137 gggcatgaagaagaatggccgcccgccgccgaagtcgaggtcgtagaacgggatccgcag 1078

                                                                        
Query: 338  cccgctgtccacctcgatgttggggctcagcaccatgtccgccgcgtcggccgtcgccac 397
            || |||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||
Sbjct: 1077 ccagctgtccacctcgatgttcgggctcagcaccatctccgccgcgtcggccgacgccac 1018

                                       
Query: 398  cagccgctccttctccaccgcgccgga 424
            ||||||||||| ||||||||| |||||
Sbjct: 1017 cagccgctcctcctccaccgcaccgga 991



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>emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087O24,
             complete sequence
          Length = 146168

 Score =  347 bits (175), Expect = 2e-92
 Identities = 244/267 (91%)
 Strand = Plus / Minus

                                                                         
Query: 158   gtagcaacggttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccac 217
             |||||| | ||||||||||  || |||||||||||| |||||||||||||| ||||| ||
Sbjct: 11597 gtagcagcagttcttgaagacgtccatgtcgcggctgaagagtggcacgtacgcgtcaac 11538

                                                                         
Query: 218   gctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagct 277
             ||| |||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 11537 gctcccgtcgccgaagaaagacggcagcaggatgagcaaaccttccaccggcaggtagct 11478

                                                                         
Query: 278   gggcatgaagaagaatggccgcccgccgcccaagtccatgtcgtaaaaagggatccgcag 337
             |||||||||||||||||||||||||||||| ||||| | |||||| || |||||||||||
Sbjct: 11477 gggcatgaagaagaatggccgcccgccgccgaagtcgaggtcgtagaacgggatccgcag 11418

                                                                         
Query: 338   cccgctgtccacctcgatgttggggctcagcaccatgtccgccgcgtcggccgtcgccac 397
             || |||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||
Sbjct: 11417 ccagctgtccacctcgatgttcgggctcagcaccatctccgccgcgtcggccgacgccac 11358

                                        
Query: 398   cagccgctccttctccaccgcgccgga 424
             ||||||||||| ||||||||| |||||
Sbjct: 11357 cagccgctcctcctccaccgcaccgga 11331



 Score =  297 bits (150), Expect = 2e-77
 Identities = 231/258 (89%)
 Strand = Plus / Plus

                                                                         
Query: 167   gttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccacgctgccgtc 226
             |||||||||||||| ||||||| |||| |||||||||||||||||||| |||||||||||
Sbjct: 13917 gttcttgaaggtgtccatgtcgtggctgaagagtggcacgtaggcgtcgacgctgccgtc 13976

                                                                         
Query: 227   gcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagctgggcatgaa 286
             |||  ||||||| ||||| |||||||| ||||||||||||||||||||||| ||| ||||
Sbjct: 13977 gccggagaaagatggcaggaggatgagaagaccctccaccggcaggtagctaggcgtgaa 14036

                                                                         
Query: 287   gaagaatggccgcccgccgcccaagtccatgtcgtaaaaagggatccgcagcccgctgtc 346
              | ||||||| | |||| ||| ||||| |  ||||| || ||||||||||||| ||||||
Sbjct: 14037 caggaatggctggccgctgccgaagtcaagctcgtagaacgggatccgcagccagctgtc 14096

                                                                         
Query: 347   cacctcgatgttggggctcagcaccatgtccgccgcgtcggccgtcgccaccagccgctc 406
             |||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 14097 cacctcgatgttcgggctcagcaccatctccgccgcgtcggccgacgccaccagccgctc 14156

                               
Query: 407   cttctccaccgcgccgga 424
             || |||||||||||||||
Sbjct: 14157 ctcctccaccgcgccgga 14174



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  347 bits (175), Expect = 2e-92
 Identities = 244/267 (91%)
 Strand = Plus / Minus

                                                                            
Query: 158      gtagcaacggttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccac 217
                |||||| | ||||||||||  || |||||||||||| |||||||||||||| ||||| ||
Sbjct: 33960700 gtagcagcagttcttgaagacgtccatgtcgcggctgaagagtggcacgtacgcgtcaac 33960641

                                                                            
Query: 218      gctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagct 277
                ||| |||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 33960640 gctcccgtcgccgaagaaagacggcagcaggatgagcaaaccttccaccggcaggtagct 33960581

                                                                            
Query: 278      gggcatgaagaagaatggccgcccgccgcccaagtccatgtcgtaaaaagggatccgcag 337
                |||||||||||||||||||||||||||||| ||||| | |||||| || |||||||||||
Sbjct: 33960580 gggcatgaagaagaatggccgcccgccgccgaagtcgaggtcgtagaacgggatccgcag 33960521

                                                                            
Query: 338      cccgctgtccacctcgatgttggggctcagcaccatgtccgccgcgtcggccgtcgccac 397
                || |||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||
Sbjct: 33960520 ccagctgtccacctcgatgttcgggctcagcaccatctccgccgcgtcggccgacgccac 33960461

                                           
Query: 398      cagccgctccttctccaccgcgccgga 424
                ||||||||||| ||||||||| |||||
Sbjct: 33960460 cagccgctcctcctccaccgcaccgga 33960434



 Score =  297 bits (150), Expect = 2e-77
 Identities = 231/258 (89%)
 Strand = Plus / Plus

                                                                            
Query: 167      gttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccacgctgccgtc 226
                |||||||||||||| ||||||| |||| |||||||||||||||||||| |||||||||||
Sbjct: 33963020 gttcttgaaggtgtccatgtcgtggctgaagagtggcacgtaggcgtcgacgctgccgtc 33963079

                                                                            
Query: 227      gcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagctgggcatgaa 286
                |||  ||||||| ||||| |||||||| ||||||||||||||||||||||| ||| ||||
Sbjct: 33963080 gccggagaaagatggcaggaggatgagaagaccctccaccggcaggtagctaggcgtgaa 33963139

                                                                            
Query: 287      gaagaatggccgcccgccgcccaagtccatgtcgtaaaaagggatccgcagcccgctgtc 346
                 | ||||||| | |||| ||| ||||| |  ||||| || ||||||||||||| ||||||
Sbjct: 33963140 caggaatggctggccgctgccgaagtcaagctcgtagaacgggatccgcagccagctgtc 33963199

                                                                            
Query: 347      cacctcgatgttggggctcagcaccatgtccgccgcgtcggccgtcgccaccagccgctc 406
                |||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 33963200 cacctcgatgttcgggctcagcaccatctccgccgcgtcggccgacgccaccagccgctc 33963259

                                  
Query: 407      cttctccaccgcgccgga 424
                || |||||||||||||||
Sbjct: 33963260 ctcctccaccgcgccgga 33963277



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>dbj|AK109743.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-E07, full
            insert sequence
          Length = 1640

 Score =  347 bits (175), Expect = 2e-92
 Identities = 244/267 (91%)
 Strand = Plus / Minus

                                                                        
Query: 158  gtagcaacggttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccac 217
            |||||| | ||||||||||  || |||||||||||| |||||||||||||| ||||| ||
Sbjct: 1411 gtagcagcagttcttgaagacgtccatgtcgcggctgaagagtggcacgtacgcgtcaac 1352

                                                                        
Query: 218  gctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagct 277
            ||| |||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 1351 gctcccgtcgccgaagaaagacggcagcaggatgagcaaaccttccaccggcaggtagct 1292

                                                                        
Query: 278  gggcatgaagaagaatggccgcccgccgcccaagtccatgtcgtaaaaagggatccgcag 337
            |||||||||||||||||||||||||||||| ||||| | |||||| || |||||||||||
Sbjct: 1291 gggcatgaagaagaatggccgcccgccgccgaagtcgaggtcgtagaacgggatccgcag 1232

                                                                        
Query: 338  cccgctgtccacctcgatgttggggctcagcaccatgtccgccgcgtcggccgtcgccac 397
            || |||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||
Sbjct: 1231 ccagctgtccacctcgatgttcgggctcagcaccatctccgccgcgtcggccgacgccac 1172

                                       
Query: 398  cagccgctccttctccaccgcgccgga 424
            ||||||||||| ||||||||| |||||
Sbjct: 1171 cagccgctcctcctccaccgcaccgga 1145



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>ref|XM_474244.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1350

 Score =  297 bits (150), Expect = 2e-77
 Identities = 231/258 (89%)
 Strand = Plus / Minus

                                                                        
Query: 167  gttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccacgctgccgtc 226
            |||||||||||||| ||||||| |||| |||||||||||||||||||| |||||||||||
Sbjct: 1320 gttcttgaaggtgtccatgtcgtggctgaagagtggcacgtaggcgtcgacgctgccgtc 1261

                                                                        
Query: 227  gcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagctgggcatgaa 286
            |||  ||||||| ||||| |||||||| ||||||||||||||||||||||| ||| ||||
Sbjct: 1260 gccggagaaagatggcaggaggatgagaagaccctccaccggcaggtagctaggcgtgaa 1201

                                                                        
Query: 287  gaagaatggccgcccgccgcccaagtccatgtcgtaaaaagggatccgcagcccgctgtc 346
             | ||||||| | |||| ||| ||||| |  ||||| || ||||||||||||| ||||||
Sbjct: 1200 caggaatggctggccgctgccgaagtcaagctcgtagaacgggatccgcagccagctgtc 1141

                                                                        
Query: 347  cacctcgatgttggggctcagcaccatgtccgccgcgtcggccgtcgccaccagccgctc 406
            |||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 1140 cacctcgatgttcgggctcagcaccatctccgccgcgtcggccgacgccaccagccgctc 1081

                              
Query: 407  cttctccaccgcgccgga 424
            || |||||||||||||||
Sbjct: 1080 ctcctccaccgcgccgga 1063



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>ref|XM_469315.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1389

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 195  aagagtggcacgtaggcgtccacgctgccgtcgcc 229
            ||||||||||||||| |||| | ||||||||||||
Sbjct: 1340 aagagtggcacgtagacgtcgatgctgccgtcgcc 1306



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 195      aagagtggcacgtaggcgtccacgctgccgtcgcc 229
                ||||||||||||||| |||| | ||||||||||||
Sbjct: 26918691 aagagtggcacgtagacgtcgatgctgccgtcgcc 26918657



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>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete
             sequence
          Length = 149303

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 195   aagagtggcacgtaggcgtccacgctgccgtcgcc 229
             ||||||||||||||| |||| | ||||||||||||
Sbjct: 97691 aagagtggcacgtagacgtcgatgctgccgtcgcc 97657



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 195      aagagtggcacgtaggcgtccacgctgccgtcgcc 229
                ||||||||||||||| |||| | ||||||||||||
Sbjct: 27010014 aagagtggcacgtagacgtcgatgctgccgtcgcc 27009980



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>emb|AL365215.23| Human DNA sequence from clone RP11-416D8 on chromosome 10 Contains the
             5' end of the RSU1 gene for Ras suppressor protein 1, the
             3' end of the CUBN gene for cubilin (intrinsic
             factor-cobalamin receptor) and a CpG island, complete
             sequence
          Length = 184703

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 350   ctcgatgttggggctcagcac 370
             |||||||||||||||||||||
Sbjct: 51790 ctcgatgttggggctcagcac 51810



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>emb|BX027057.1|CNS08T1H Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA40CC11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 279

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 381 gcgtcggccgtcgccaccagc 401
           |||||||||||||||||||||
Sbjct: 131 gcgtcggccgtcgccaccagc 111



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>emb|BX284752.1|NCB23B10 Neurospora crassa DNA linkage group II BAC contig B23B10
          Length = 99967

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 82    agtggctaacgttgatccgacacca 106
             |||||||||||| ||||||||||||
Sbjct: 33123 agtggctaacgtcgatccgacacca 33147



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>emb|BX546502.7| Zebrafish DNA sequence from clone RP71-62P22 in linkage group 25,
              complete sequence
          Length = 169168

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 387    gccgtcgccaccagccgctcc 407
              |||||||||||||||||||||
Sbjct: 100054 gccgtcgccaccagccgctcc 100074



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>ref|XM_315590.2| Anopheles gambiae str. PEST ENSANGP00000017720
           (ENSANGG00000015231), partial mRNA
          Length = 966

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 381 gcgtcggccgtcgccaccagc 401
           |||||||||||||||||||||
Sbjct: 820 gcgtcggccgtcgccaccagc 840



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>ref|XM_633465.1| Dictyostelium discoideum hypothetical protein (DDB0218618), partial
            mRNA
          Length = 1587

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 50   tgaatcaagaacttcaaaaa 69
            ||||||||||||||||||||
Sbjct: 1145 tgaatcaagaacttcaaaaa 1164



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>gb|AF025467.1| Caenorhabditis elegans cosmid R148, complete sequence
          Length = 37154

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 230  caagaaagacggcagcagga 249
            ||||||||||||||||||||
Sbjct: 2399 caagaaagacggcagcagga 2418



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>gb|AC144673.3| Mus musculus BAC clone RP23-40K14 from chromosome 14, complete sequence
          Length = 162333

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      ttaaaacttcgtttatttac 26
              ||||||||||||||||||||
Sbjct: 115760 ttaaaacttcgtttatttac 115741



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>gb|AE007288.1| Sinorhizobium meliloti 1021 plasmid pSymA section 94 of 121 of the
            complete plasmid sequence
          Length = 10943

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 384  tcggccgtcgccaccagccg 403
            ||||||||||||||||||||
Sbjct: 2761 tcggccgtcgccaccagccg 2742



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>gb|AY577002.1| Danio rerio clone RZ150A4A11 C22orf4-like protein mRNA, complete
           cds
          Length = 2068

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 230 caagaaagacggcagcagga 249
           ||||||||||||||||||||
Sbjct: 372 caagaaagacggcagcagga 391



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>emb|AJ231133.1|SOF231133 Saccharum officinarum mRNA for caffeic acid 3-O-methyltransferase
          Length = 1486

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 368 caccatgtccgccgcgtcgg 387
           ||||||||||||||||||||
Sbjct: 335 caccatgtccgccgcgtcgg 316



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>gb|AY365419.1| Saccharum hybrid cultivar caffeic acid 3-O-methyltransferase (COMT)
           gene, complete cds
          Length = 2012

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 368 caccatgtccgccgcgtcgg 387
           ||||||||||||||||||||
Sbjct: 231 caccatgtccgccgcgtcgg 212



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>gb|U13072.1| Caenorhabditis elegans cosmid C07D10, complete sequence
          Length = 27935

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    ttgaatcaagaacttcaaaa 68
             ||||||||||||||||||||
Sbjct: 19499 ttgaatcaagaacttcaaaa 19518



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>ref|NM_181961.1| Caenorhabditis elegans R148.5b (R148.5) mRNA, complete cds
          Length = 1518

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 230 caagaaagacggcagcagga 249
           ||||||||||||||||||||
Sbjct: 637 caagaaagacggcagcagga 656



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>ref|NM_065264.3| Caenorhabditis elegans R148.5a (R148.5) mRNA, complete cds
          Length = 1848

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 230 caagaaagacggcagcagga 249
           ||||||||||||||||||||
Sbjct: 637 caagaaagacggcagcagga 656



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>ref|NM_214799.1| Danio rerio zgc:101677 (zgc:101677), mRNA
          Length = 2068

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 230 caagaaagacggcagcagga 249
           ||||||||||||||||||||
Sbjct: 372 caagaaagacggcagcagga 391



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 296     ccgcccgccgcccaagtcca 315
               ||||||||||||||||||||
Sbjct: 3974381 ccgcccgccgcccaagtcca 3974362



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 376      ccgccgcgtcggccgtcgccacca 399
                ||||||||||| ||||||||||||
Sbjct: 29600703 ccgccgcgtcgcccgtcgccacca 29600726



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>dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1663_H12
          Length = 125422

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 376   ccgccgcgtcggccgtcgccacca 399
             ||||||||||| ||||||||||||
Sbjct: 44288 ccgccgcgtcgcccgtcgccacca 44311



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>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0655A07
          Length = 172473

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 376    ccgccgcgtcggccgtcgccacca 399
              ||||||||||| ||||||||||||
Sbjct: 165209 ccgccgcgtcgcccgtcgccacca 165232



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 296     ccgcccgccgcccaagtcca 315
               ||||||||||||||||||||
Sbjct: 3974357 ccgcccgccgcccaagtcca 3974338



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>emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb0028H07 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132682

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   ccgcccgccgcccaagtcca 315
             ||||||||||||||||||||
Sbjct: 10791 ccgcccgccgcccaagtcca 10772



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>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 152090

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 296    ccgcccgccgcccaagtcca 315
              ||||||||||||||||||||
Sbjct: 136357 ccgcccgccgcccaagtcca 136338



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>dbj|AP003385.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-655M14, complete
             sequences
          Length = 174074

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   aggcacacattggcacatgg 125
             ||||||||||||||||||||
Sbjct: 72264 aggcacacattggcacatgg 72245


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,542,265
Number of Sequences: 3902068
Number of extensions: 3542265
Number of successful extensions: 78554
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78283
Number of HSP's gapped (non-prelim): 270
length of query: 425
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 403
effective length of database: 17,147,199,772
effective search space: 6910321508116
effective search space used: 6910321508116
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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