>gb|AY521625.1| Singapore grouper iridovirus, complete genome
          Length = 140131

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 259    cggcgaacgctttgaagcatcttgg 283
              ||||||||||||||| |||||||||
Sbjct: 106351 cggcgaacgctttgacgcatcttgg 106375

>emb|AL355597.19| Human DNA sequence from clone RP11-358N3 on chromosome 10 Contains a
             CpG island, complete sequence
          Length = 89340

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 9     taatattattcagtttcattt 29
             |||||||||||||||||||||
Sbjct: 41244 taatattattcagtttcattt 41224

>gb|AY666015.1| Grouper iridovirus, complete genome
          Length = 139793

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 259   cggcgaacgctttgaagcatcttgg 283
             ||||||||||||||| |||||||||
Sbjct: 95027 cggcgaacgctttgacgcatcttgg 95051

>ref|XM_510192.1| PREDICTED: Pan troglodytes similar to 6.8 kDa mitochondrial
           proteolipid (PRO1574) (LOC453194), mRNA
          Length = 735

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 268 ctttgaagcatcttggcgca 287
           ||||||||||||||||||||
Sbjct: 269 ctttgaagcatcttggcgca 250

>gb|AC153638.4| Mus musculus 6 BAC RP23-416H6 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 171957

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 13    attattcagtttcatttgatgaat 36
             ||||||||||||||||| ||||||
Sbjct: 34363 attattcagtttcatttaatgaat 34386

>gb|BC001944.1| Homo sapiens chromosome 14 open reading frame 2, mRNA (cDNA clone
           MGC:4311 IMAGE:2819801), complete cds
          Length = 625

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 268 ctttgaagcatcttggcgca 287
           ||||||||||||||||||||
Sbjct: 60  ctttgaagcatcttggcgca 41

>gb|BC000429.2| Homo sapiens chromosome 14 open reading frame 2, mRNA (cDNA clone
           MGC:8356 IMAGE:2819801), complete cds
          Length = 625

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 268 ctttgaagcatcttggcgca 287
           ||||||||||||||||||||
Sbjct: 60  ctttgaagcatcttggcgca 41

>gb|AC112938.11| Mus musculus chromosome 5, clone RP24-72E12, complete sequence
          Length = 235924

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 14     ttattcagtttcatttgatgaatg 37
              |||||||||||||| |||||||||
Sbjct: 169348 ttattcagtttcatctgatgaatg 169371

>ref|NM_004894.1| Homo sapiens chromosome 14 open reading frame 2 (C14orf2), mRNA
          Length = 627

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 268 ctttgaagcatcttggcgca 287
           ||||||||||||||||||||
Sbjct: 71  ctttgaagcatcttggcgca 52

>gb|AC133908.7| Mus musculus chromosome 5, clone RP24-299L9, complete sequence
          Length = 214270

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 400    atctttcttaaattatctcc 419
              ||||||||||||||||||||
Sbjct: 189995 atctttcttaaattatctcc 189976

>emb|AM072757.1| Methylocella silvestris soluble methane monooxygenase operon (smmo
             genes)
          Length = 19227

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 443   gctcgcccgcttcatcgccc 462
             ||||||||||||||||||||
Sbjct: 14035 gctcgcccgcttcatcgccc 14054

>gb|BC063419.1| Homo sapiens cDNA clone IMAGE:5221877, partial cds
          Length = 1770

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 268 ctttgaagcatcttggcgca 287
           ||||||||||||||||||||
Sbjct: 53  ctttgaagcatcttggcgca 34

>gb|BC047289.1| Homo sapiens chromosome 14 open reading frame 2, mRNA (cDNA clone
           IMAGE:5221876), with apparent retained intron
          Length = 1770

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 268 ctttgaagcatcttggcgca 287
           ||||||||||||||||||||
Sbjct: 53  ctttgaagcatcttggcgca 34

>gb|AC127327.4| Mus musculus BAC clone RP23-254M18 from 5, complete sequence
          Length = 198433

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 400   atctttcttaaattatctcc 419
             ||||||||||||||||||||
Sbjct: 97225 atctttcttaaattatctcc 97206

>emb|AL023913.6|HS1068F16 Human DNA sequence from clone RP5-1068F16 on chromosome 20p12 Contains
              the 3' end of the SNAP25 gene for 25kDa
              synaptosomal-associated protein, the RPL23AP6 gene for
              ribosomal protein L23a pseudogene 6, part of a novel gene
              and a hypoxia induced gene 1 (HIG1) pseudogene, complete
              sequence
          Length = 140306

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     aatattattcagtttcattt 29
              ||||||||||||||||||||
Sbjct: 112236 aatattattcagtttcattt 112217

>emb|CR593417.1| full-length cDNA clone CS0DB007YI04 of Neuroblastoma Cot
           10-normalized of Homo sapiens (human)
          Length = 370

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 268 ctttgaagcatcttggcgca 287
           ||||||||||||||||||||
Sbjct: 54  ctttgaagcatcttggcgca 35

>gb|AC021642.14| Mus musculus chromosome 10 clone  RP23-113O5, containing myf5 and myf6,
             complete sequence
          Length = 203839

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   accaatcaagaaacagcaac 153
             ||||||||||||||||||||
Sbjct: 80032 accaatcaagaaacagcaac 80051

>gb|AF054175.1|AF054175 Homo sapiens mitochondrial proteolipid 68MP homolog mRNA, nuclear
           gene encoding mitochondrial protein, complete cds
          Length = 627

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 268 ctttgaagcatcttggcgca 287
           ||||||||||||||||||||
Sbjct: 71  ctttgaagcatcttggcgca 52

>gb|AC024950.3|AC024950 Mus musculus strain C57BL6/J chromosome 6 clone RP23-208N9, complete
              sequence
          Length = 182382

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 13     attattcagtttcatttgatgaat 36
              ||||||||||||||||| ||||||
Sbjct: 149591 attattcagtttcatttaatgaat 149614

>gb|AF116639.1|AF116639 Homo sapiens PRO1574 mRNA, complete cds
          Length = 587

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 268 ctttgaagcatcttggcgca 287
           ||||||||||||||||||||
Sbjct: 104 ctttgaagcatcttggcgca 85

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 102     ggtatgaacttatcaataaaccct 125
               ||||| ||||||||||||||||||
Sbjct: 9969121 ggtattaacttatcaataaaccct 9969098

>dbj|AP006158.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:B1127C04
          Length = 121441

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 102  ggtatgaacttatcaataaaccct 125
            ||||| ||||||||||||||||||
Sbjct: 9023 ggtattaacttatcaataaaccct 9000

>dbj|AP005697.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBb0005C03
          Length = 166423

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 102    ggtatgaacttatcaataaaccct 125
              ||||| ||||||||||||||||||
Sbjct: 116368 ggtattaacttatcaataaaccct 116345

>gb|AC153505.6| Mus musculus 10 BAC RP23-336I13 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 190636

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 180    catgtatgtacacccatatggccatata 207
              ||||||||||||| ||||||| ||||||
Sbjct: 167106 catgtatgtacacacatatggacatata 167133

>gb|AY109519.1| Zea mays CL5798_1 mRNA sequence
          Length = 1022

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 430 gtcaacaatggcggctcgcc 449
           ||||||||||||||||||||
Sbjct: 376 gtcaacaatggcggctcgcc 395

>emb|AL844535.13| Mouse DNA sequence from clone RP23-211K16 on chromosome 2, complete
             sequence
          Length = 204676

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 401   tctttcttaaattatctccc 420
             ||||||||||||||||||||
Sbjct: 48336 tctttcttaaattatctccc 48317

>gb|AC154211.1| Mus musculus BAC clone RP24-113P8 from 17, complete sequence
          Length = 146732

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 459   gccccaaggccaaggccaacacaa 482
             |||||| |||||||||||||||||
Sbjct: 50310 gccccagggccaaggccaacacaa 50287


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,382,671
Number of Sequences: 3902068
Number of extensions: 4382671
Number of successful extensions: 93654
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93585
Number of HSP's gapped (non-prelim): 69
length of query: 482
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 460
effective length of database: 17,147,199,772
effective search space: 7887711895120
effective search space used: 7887711895120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)