ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart08d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC135561.3| Oryza sativa (japonica cultivar-group) chromosome... 264 3e-67
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 264 3e-67
3dbj|AK071806.1| Oryza sativa (japonica cultivar-group) cDNA clon... 264 3e-67
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 264 3e-67
5gb|AC117264.2| Oryza sativa (japonica cultivar-group) chromosome... 92 2e-15
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
7dbj|AK098926.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
8dbj|AK061486.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
9dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 52 0.002
10gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete... 52 0.002
11dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 50 0.007
12gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, com... 46 0.11
13gb|AC136520.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.44
14gb|AC136519.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.44
15ref|XM_362769.1| Magnaporthe grisea 70-15 hypothetical protein (... 44 0.44
16gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 44 0.44
17gb|AY826855.1| Heterocapsa triquetra clone HTGG1 chloroplast ger... 44 0.44
18dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.44
19emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 44 0.44
20gb|AF509565.1| Streptomyces sp. JP95 griseorhodin biosynthesis g... 44 0.44
21gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 42 1.7
22ref|XM_417831.1| PREDICTED: Gallus gallus similar to thioredoxin... 42 1.7
23gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 42 1.7
24gb|AC112150.4| Mus musculus BAC clone RP24-84I17 from chromosome... 42 1.7
25gb|AC011195.14| Homo sapiens chromosome 17, clone CTD-2200P10, c... 42 1.7
26gb|AF325217.1| Rhodopseudomonas palustris membrane-bound proton-... 42 1.7
27dbj|AK031098.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN... 42 1.7
28emb|AJ417658.1|POS417658 Pleurotus ostreatus partial mRNA for hy... 42 1.7
29emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 42 1.7
30emb|BX908786.9| Zebrafish DNA sequence from clone CH211-13O8 in ... 42 1.7
31emb|CT010517.11| Mouse DNA sequence from clone RP23-357P12 on ch... 42 1.7
32gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 6.9
33gb|AF371960.1| Infectious spleen and kidney necrosis virus, comp... 40 6.9
34gb|AC135599.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
35gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
36gb|AY532606.1| Rock bream iridovirus strain RBIV-KOR-TY1 from So... 40 6.9
37gb|AC095996.9| Rattus norvegicus 18 BAC CH230-13K4 (Children's H... 40 6.9
38gb|AC121292.9| Mus musculus chromosome 1, clone RP23-172B15, com... 40 6.9
39gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 6.9
40ref|XM_418938.1| PREDICTED: Gallus gallus similar to tRNA seleno... 40 6.9
41gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 6.9
42gb|DQ118403.1| Uncultured euryarchaeote Alv-FOS1 fosmid genomic ... 40 6.9
43ref|XM_754701.1| Ustilago maydis 521 hypothetical protein (UM036... 40 6.9
44emb|AL157879.7| Human DNA sequence from clone RP11-110H4 on chro... 40 6.9
45gb|AC093243.2| Homo sapiens chromosome 5 clone RP11-110H4, compl... 40 6.9
46gb|AC140139.2| Homo sapiens chromosome 5 clone RP11-1417I21, com... 40 6.9
47gb|AC139776.2| Homo sapiens chromosome 5 clone RP11-1005E12, com... 40 6.9
48gb|AC139495.2| Homo sapiens chromosome 5 clone RP11-848G14, comp... 40 6.9
49gb|AC139272.3| Homo sapiens chromosome 5 clone RP11-589F5, compl... 40 6.9
50gb|AC138959.2| Homo sapiens chromosome 5 clone RP11-880C13, comp... 40 6.9
51gb|AC138866.2| Homo sapiens chromosome 5 clone RP11-1415C14, com... 40 6.9
52gb|AC146949.1| Homo sapiens chromosome 5 clone RP11-1198D22, com... 40 6.9
53gb|AC145129.2| Homo sapiens chromosome 5 clone RP11-1080P5, comp... 40 6.9
54gb|AC145034.2| Homo sapiens chromosome 5 clone RP11-1414O21, com... 40 6.9
55gb|AC146944.1| Homo sapiens chromosome 5 clone RP11-497H16, comp... 40 6.9
56gb|AC138957.2| Homo sapiens chromosome 5 clone RP11-846E4, compl... 40 6.9
57gb|AC139505.2| Homo sapiens chromosome 5 clone RP11-910M8, compl... 40 6.9
58gb|AC138928.2| Homo sapiens chromosome 5 clone RP11-674O19, comp... 40 6.9
59gb|AC002432.1| Homo sapiens BAC clone CTA-317G18 from 7, complet... 40 6.9
60gb|AC145144.2| Homo sapiens chromosome 5 clone RP11-1432L1, comp... 40 6.9
61gb|AC145102.2| Homo sapiens chromosome 5 clone RP11-696L12, comp... 40 6.9
62gb|AC139510.3| Homo sapiens chromosome 5 clone RP11-977J23, comp... 40 6.9
63gb|AC139507.2| Homo sapiens chromosome 5 clone RP11-937A6, compl... 40 6.9
64gb|AC139463.2| Homo sapiens chromosome 5 clone RPCI-11_1264N5, c... 40 6.9
65gb|AC139277.2| Homo sapiens chromosome 5 clone RP11-619K7, compl... 40 6.9
66gb|AC138911.2| Homo sapiens chromosome 5 clone RP11-618O22, comp... 40 6.9
67gb|AC132802.2| Homo sapiens chromosome 5 clone CTC-273M15, compl... 40 6.9
68gb|AY894343.1| Orange-spotted grouper iridovirus, complete genome 40 6.9
69emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.9
70emb|BX640432.1| Bordetella parapertussis strain 12822, complete ... 40 6.9
71emb|BX640416.1| Bordetella pertussis strain Tohama I, complete g... 40 6.9
72emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete ... 40 6.9
73emb|AL009030.15|HS28I24 Human DNA sequence from clone RP1-28I24 ... 40 6.9
74gb|AC182492.2| Pan troglodytes BAC clone CH251-294F23 from chrom... 40 6.9
75gb|AE012449.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 6.9
76gb|AC006069.3| Arabidopsis thaliana chromosome 2 clone T8O11 map... 40 6.9
77gb|AC093247.3| Homo sapiens chromosome 5 clone RP11-138M1, compl... 40 6.9
78emb|CR406308.1| Gallus gallus finished cDNA, clone ChEST864j2 40 6.9
79gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 6.9
80gb|AC010237.8|AC010237 Homo sapiens chromosome 5 clone CTC-348J2... 40 6.9
81emb|BX932376.2| Gallus gallus finished cDNA, clone ChEST96n4 40 6.9
82gb|AC139500.2| Homo sapiens chromosome 5 clone RP11-864E4, compl... 40 6.9
83gb|AC138827.3| Homo sapiens chromosome 5 clone RP11-1151M9, comp... 40 6.9
84gb|AC139834.2| Homo sapiens chromosome 5 clone RP11-974F13, comp... 40 6.9
85gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 6.9
86emb|BX950487.1| Gallus gallus finished cDNA, clone ChEST544l1 40 6.9
87gb|AC140175.2| Homo sapiens chromosome 5 clone RP11-833G1, compl... 40 6.9
88gb|AC108108.2| Homo sapiens chromosome 5 clone RP11-260M21, comp... 40 6.9
89gb|AY117439.1| Streptomyces carzinostaticus subsp. neocarzinosta... 40 6.9
90gb|AC118459.2| Homo sapiens chromosome 5 clone RP11-124L9, compl... 40 6.9
91gb|AE004591.1| Pseudomonas aeruginosa PAO1, section 152 of 529 o... 40 6.9
92gb|AC137781.2| Homo sapiens chromosome 5 clone RP11-1108I11, com... 40 6.9
93gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.9
94gb|AC138409.1| Homo sapiens chromosome 5 clone RP11-1023L17, com... 40 6.9
95gb|AC131392.2| Homo sapiens chromosome 5 clone RP11-98J23, compl... 40 6.9
96gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 6.9
97gb|AC134334.3| Mus musculus BAC clone RP24-143M4 from 9, complet... 40 6.9
98gb|AC154280.1| Mus musculus BAC clone RP24-271G1 from 9, complet... 40 6.9
99gb|AC157664.2| Gallus gallus BAC clone CH261-174B17 from chromos... 40 6.9
100gb|AC132801.2| Homo sapiens chromosome 5 clone CTC-202O15, compl... 40 6.9
101dbj|AP004547.1| Lotus japonicus genomic DNA, chromosome 6, clone... 40 6.9
102gb|AC167020.3| Mus musculus BAC clone RP23-201I6 from chromosome... 40 6.9
103dbj|AB059297.1| Human immunodeficiency virus type 1 env gene for... 40 6.9 
>gb|AC135561.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0086N07
              map S790A, complete sequence
          Length = 178523

 Score =  264 bits (133), Expect = 3e-67
 Identities = 199/221 (90%)
 Strand = Plus / Plus

                                                                          
Query: 287    gcgacctggttgcggcggtcgtcgagcgccttccccaccttgtcgcacgcgaggctggcc 346
              ||||||||||| ||||| ||||||||| |||| | | |||||  | | ||||  || |||
Sbjct: 99829  gcgacctggttccggcgctcgtcgagcaccttactcgccttgaggtaagcgatccttgcc 99888

                                                                          
Query: 347    cagtcgtaccagtgcagcgcgacgtaaacgcccaggccggcgatgatgccgttggcgatg 406
              |||||||| ||||||||||||| ||| || |||| |||||||||||||||||||||||||
Sbjct: 99889  cagtcgtagcagtgcagcgcgatgtatactcccaagccggcgatgatgccgttggcgatg 99948

                                                                          
Query: 407    gagaaggtgagcggcatgagcgccatggtgacgaacgccgggatggcctccttcatgtcg 466
              ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| 
Sbjct: 99949  gagaaggtgagcggcatgagcaccatggtgacgaacgccgggatggcctccttcatgtcc 100008

                                                       
Query: 467    ccccactcgatctccttggccacgcgcatcatcatggcgcc 507
               |||||||||| |||||||||||||||||||||||||||||
Sbjct: 100009 gcccactcgatgtccttggccacgcgcatcatcatggcgcc 100049
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  264 bits (133), Expect = 3e-67
 Identities = 199/221 (90%)
 Strand = Plus / Minus

                                                                            
Query: 287      gcgacctggttgcggcggtcgtcgagcgccttccccaccttgtcgcacgcgaggctggcc 346
                ||||||||||| ||||| ||||||||| |||| | | |||||  | | ||||  || |||
Sbjct: 13084251 gcgacctggttccggcgctcgtcgagcaccttactcgccttgaggtaagcgatccttgcc 13084192

                                                                            
Query: 347      cagtcgtaccagtgcagcgcgacgtaaacgcccaggccggcgatgatgccgttggcgatg 406
                |||||||| ||||||||||||| ||| || |||| |||||||||||||||||||||||||
Sbjct: 13084191 cagtcgtagcagtgcagcgcgatgtatactcccaagccggcgatgatgccgttggcgatg 13084132

                                                                            
Query: 407      gagaaggtgagcggcatgagcgccatggtgacgaacgccgggatggcctccttcatgtcg 466
                ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| 
Sbjct: 13084131 gagaaggtgagcggcatgagcaccatggtgacgaacgccgggatggcctccttcatgtcc 13084072

                                                         
Query: 467      ccccactcgatctccttggccacgcgcatcatcatggcgcc 507
                 |||||||||| |||||||||||||||||||||||||||||
Sbjct: 13084071 gcccactcgatgtccttggccacgcgcatcatcatggcgcc 13084031



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 426      gcgccatggtgacgaacgcc 445
                ||||||||||||||||||||
Sbjct: 11929801 gcgccatggtgacgaacgcc 11929782



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 118      tacgtagtacgtacggttcc 137
                ||||||||||||||||||||
Sbjct: 10884495 tacgtagtacgtacggttcc 10884476
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>dbj|AK071806.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111J10, full
            insert sequence
          Length = 1925

 Score =  264 bits (133), Expect = 3e-67
 Identities = 199/221 (90%)
 Strand = Plus / Minus

                                                                        
Query: 287  gcgacctggttgcggcggtcgtcgagcgccttccccaccttgtcgcacgcgaggctggcc 346
            ||||||||||| ||||| ||||||||| |||| | | |||||  | | ||||  || |||
Sbjct: 1622 gcgacctggttccggcgctcgtcgagcaccttactcgccttgaggtaagcgatccttgcc 1563

                                                                        
Query: 347  cagtcgtaccagtgcagcgcgacgtaaacgcccaggccggcgatgatgccgttggcgatg 406
            |||||||| ||||||||||||| ||| || |||| |||||||||||||||||||||||||
Sbjct: 1562 cagtcgtagcagtgcagcgcgatgtatactcccaagccggcgatgatgccgttggcgatg 1503

                                                                        
Query: 407  gagaaggtgagcggcatgagcgccatggtgacgaacgccgggatggcctccttcatgtcg 466
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| 
Sbjct: 1502 gagaaggtgagcggcatgagcaccatggtgacgaacgccgggatggcctccttcatgtcc 1443

                                                     
Query: 467  ccccactcgatctccttggccacgcgcatcatcatggcgcc 507
             |||||||||| |||||||||||||||||||||||||||||
Sbjct: 1442 gcccactcgatgtccttggccacgcgcatcatcatggcgcc 1402
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  264 bits (133), Expect = 3e-67
 Identities = 199/221 (90%)
 Strand = Plus / Minus

                                                                            
Query: 287      gcgacctggttgcggcggtcgtcgagcgccttccccaccttgtcgcacgcgaggctggcc 346
                ||||||||||| ||||| ||||||||| |||| | | |||||  | | ||||  || |||
Sbjct: 13164430 gcgacctggttccggcgctcgtcgagcaccttactcgccttgaggtaagcgatccttgcc 13164371

                                                                            
Query: 347      cagtcgtaccagtgcagcgcgacgtaaacgcccaggccggcgatgatgccgttggcgatg 406
                |||||||| ||||||||||||| ||| || |||| |||||||||||||||||||||||||
Sbjct: 13164370 cagtcgtagcagtgcagcgcgatgtatactcccaagccggcgatgatgccgttggcgatg 13164311

                                                                            
Query: 407      gagaaggtgagcggcatgagcgccatggtgacgaacgccgggatggcctccttcatgtcg 466
                ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| 
Sbjct: 13164310 gagaaggtgagcggcatgagcaccatggtgacgaacgccgggatggcctccttcatgtcc 13164251

                                                         
Query: 467      ccccactcgatctccttggccacgcgcatcatcatggcgcc 507
                 |||||||||| |||||||||||||||||||||||||||||
Sbjct: 13164250 gcccactcgatgtccttggccacgcgcatcatcatggcgcc 13164210



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 426      gcgccatggtgacgaacgcc 445
                ||||||||||||||||||||
Sbjct: 12008208 gcgccatggtgacgaacgcc 12008189



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 118      tacgtagtacgtacggttcc 137
                ||||||||||||||||||||
Sbjct: 10963684 tacgtagtacgtacggttcc 10963665
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>gb|AC117264.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_D04,
             complete sequence
          Length = 168424

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                         
Query: 382   gccggcgatgatgccgttggcgatggagaaggtgagcggcatgagcgccatggtgacgaa 441
             |||| |||||| ||||| |||||||||| ||||||||||||||||||||| ||||| |||
Sbjct: 96213 gccgccgatgaggccgtaggcgatggagtaggtgagcggcatgagcgccagggtgaggaa 96272

                                           
Query: 442   cgccgggatggcctccttcatgtcgcccca 471
             |||||| | ||||| | |||||||| ||||
Sbjct: 96273 cgccggcacggcctgcctcatgtcggccca 96302
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                            
Query: 382      gccggcgatgatgccgttggcgatggagaaggtgagcggcatgagcgccatggtgacgaa 441
                |||| |||||| ||||| |||||||||| ||||||||||||||||||||| ||||| |||
Sbjct: 15441192 gccgccgatgaggccgtaggcgatggagtaggtgagcggcatgagcgccagggtgaggaa 15441251

                                              
Query: 442      cgccgggatggcctccttcatgtcgcccca 471
                |||||| | ||||| | |||||||| ||||
Sbjct: 15441252 cgccggcacggcctgcctcatgtcggccca 15441281



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 134     ttcctactactactaccagtag 155
               ||||||||||||||||||||||
Sbjct: 6066855 ttcctactactactaccagtag 6066876
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>dbj|AK098926.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013004J21, full
            insert sequence
          Length = 1313

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 79/90 (87%)
 Strand = Plus / Minus

                                                                        
Query: 382  gccggcgatgatgccgttggcgatggagaaggtgagcggcatgagcgccatggtgacgaa 441
            |||| |||||| ||||| |||||||||| ||||||||||||||||||||| ||||| |||
Sbjct: 1026 gccgccgatgaggccgtaggcgatggagtaggtgagcggcatgagcgccagggtgaggaa 967

                                          
Query: 442  cgccgggatggcctccttcatgtcgcccca 471
            |||||| | ||||| | |||||||| ||||
Sbjct: 966  cgccggcacggcctgcctcatgtcggccca 937
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>dbj|AK061486.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-A03, full
            insert sequence
          Length = 1388

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 79/90 (87%)
 Strand = Plus / Minus

                                                                        
Query: 382  gccggcgatgatgccgttggcgatggagaaggtgagcggcatgagcgccatggtgacgaa 441
            |||| |||||| ||||| |||||||||| ||||||||||||||||||||| ||||| |||
Sbjct: 1089 gccgccgatgaggccgtaggcgatggagtaggtgagcggcatgagcgccagggtgaggaa 1030

                                          
Query: 442  cgccgggatggcctccttcatgtcgcccca 471
            |||||| | ||||| | |||||||| ||||
Sbjct: 1029 cgccggcacggcctgcctcatgtcggccca 1000
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                
Query: 391    gatgccgttggcgatggagaaggtgagcggcatg 424
              ||||||||||||||||||| |||||| |||||||
Sbjct: 948764 gatgccgttggcgatggagtaggtgaacggcatg 948731
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>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence
          Length = 412348

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                            
Query: 394    gccgttggcgatggagaaggtgagcggcat 423
              ||||||||||||||||||||| ||||||||
Sbjct: 188685 gccgttggcgatggagaaggtcagcggcat 188714
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                
Query: 392     atgccgttggcgatggagaaggtgagcggcatg 424
               ||||||| ||||||||||||||||| |||||||
Sbjct: 4761943 atgccgtgggcgatggagaaggtgaacggcatg 4761975
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>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence
          Length = 574126

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 394    gccgttggcgatggagaaggtgagcggcatg 424
              |||||||||||| || |||||||||||||||
Sbjct: 274535 gccgttggcgatagaaaaggtgagcggcatg 274505
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>gb|AC136520.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0017O06, complete sequence
          Length = 151656

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 134   ttcctactactactaccagtag 155
             ||||||||||||||||||||||
Sbjct: 14424 ttcctactactactaccagtag 14445
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>gb|AC136519.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0007C23,
              complete sequence
          Length = 173764

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 134    ttcctactactactaccagtag 155
              ||||||||||||||||||||||
Sbjct: 114409 ttcctactactactaccagtag 114430
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>ref|XM_362769.1| Magnaporthe grisea 70-15 hypothetical protein (MG08279.4) partial
            mRNA
          Length = 1848

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 394  gccgttggcgatggagaaggtgagcggcatgagcgccatggt 435
            ||||| |||||||||| ||||||  ||||||||||| |||||
Sbjct: 1449 gccgtcggcgatggagtaggtgaagggcatgagcgcgatggt 1408
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 391     gatgccgttggcgatggagaaggtgagcggcatg 424
               ||||||||||||||||||  |||||| |||||||
Sbjct: 6140784 gatgccgttggcgatggaataggtgaacggcatg 6140751



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 396     cgttggcgatggagaaggtg 415
               ||||||||||||||||||||
Sbjct: 4992181 cgttggcgatggagaaggtg 4992200
to top
>gb|AY826855.1| Heterocapsa triquetra clone HTGG1 chloroplast geranylgeranyl
           reductase/hydrogenase mRNA, complete cds; nuclear gene
           for chloroplast product
          Length = 1876

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 463 gtcgccccactcgatctccttggccacgcg 492
           |||||||  |||||||||||||||||||||
Sbjct: 883 gtcgcccgcctcgatctccttggccacgcg 854
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                         
Query: 382     gccggcgatgatgccgttggcgatggagaaggtgagcggcat 423
               |||||||  ||||||||||| ||||||| |||||| ||||||
Sbjct: 7660429 gccggcgccgatgccgttggtgatggagtaggtgaacggcat 7660388
to top
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 391     gatgccgttggcgatggagaaggtgagcggcatg 424
               ||||||||||||||| ||| |||| |||||||||
Sbjct: 5084969 gatgccgttggcgatcgagtaggtcagcggcatg 5084936



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 396     cgttggcgatggagaaggtg 415
               ||||||||||||||||||||
Sbjct: 3892162 cgttggcgatggagaaggtg 3892181
to top
>gb|AF509565.1| Streptomyces sp. JP95 griseorhodin biosynthesis gene cluster, complete
             sequence
          Length = 36905

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 478   ctccttggccacgcgcatcatcatggcgcc 507
             |||||||||||||||||||| |||| ||||
Sbjct: 12706 ctccttggccacgcgcatcagcatgtcgcc 12677
to top
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 391    gatgccgttggcgatggagaaggtgagcggcat 423
              |||||| |||||||||||| |||| ||||||||
Sbjct: 908710 gatgccattggcgatggagtaggtcagcggcat 908678
to top
>ref|XM_417831.1| PREDICTED: Gallus gallus similar to thioredoxin family Trp26
           (LOC419684), mRNA
          Length = 726

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 97  ccaagcacagagcagagccac 117
           |||||||||||||||||||||
Sbjct: 654 ccaagcacagagcagagccac 634
to top
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 391     gatgccgttggcgatggagaaggtgagcggcat 423
               ||||||||||||||||||  |||||| ||||||
Sbjct: 5257488 gatgccgttggcgatggaataggtgaacggcat 5257456
to top
>gb|AC112150.4| Mus musculus BAC clone RP24-84I17 from chromosome 16, complete sequence
          Length = 211640

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 75     aatctcatggagccttttctt 95
              |||||||||||||||||||||
Sbjct: 118828 aatctcatggagccttttctt 118808
to top
>gb|AC011195.14| Homo sapiens chromosome 17, clone CTD-2200P10, complete sequence
          Length = 152574

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 85    agccttttctttccaagcaca 105
             |||||||||||||||||||||
Sbjct: 96087 agccttttctttccaagcaca 96067
to top
>gb|AF325217.1| Rhodopseudomonas palustris membrane-bound proton-translocating
            pyrophosphatase gene, complete cds
          Length = 2437

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 374  acgcccaggccggcgatgatg 394
            |||||||||||||||||||||
Sbjct: 1280 acgcccaggccggcgatgatg 1260
to top
>dbj|AK031098.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length enriched
            library, clone:5930404K09 product:hypothetical protein,
            full insert sequence
          Length = 2963

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 75   aatctcatggagccttttctt 95
            |||||||||||||||||||||
Sbjct: 2063 aatctcatggagccttttctt 2083
to top
>emb|AJ417658.1|POS417658 Pleurotus ostreatus partial mRNA for hypothetical zinc finger
           protein (mv129 gene)
          Length = 356

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 221 agttctatcctcacagctgctcaca 245
           |||||||||||||| ||||||||||
Sbjct: 202 agttctatcctcactgctgctcaca 178
to top
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 380    aggccggcgatgatgccgttggcga 404
              |||||||||||||||||| ||||||
Sbjct: 563173 aggccggcgatgatgccgctggcga 563149
to top
>emb|BX908786.9| Zebrafish DNA sequence from clone CH211-13O8 in linkage group 3,
             complete sequence
          Length = 121030

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 134   ttcctactactactaccagta 154
             |||||||||||||||||||||
Sbjct: 39745 ttcctactactactaccagta 39765
to top
>emb|CT010517.11| Mouse DNA sequence from clone RP23-357P12 on chromosome 16, complete
             sequence
          Length = 188228

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 75    aatctcatggagccttttctt 95
             |||||||||||||||||||||
Sbjct: 39406 aatctcatggagccttttctt 39426
to top
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 378     ccaggccggcgatgatgccgttggcgatggag 409
               |||||||| |||||| | ||||||||||||||
Sbjct: 1246717 ccaggccgccgatgacggcgttggcgatggag 1246686
to top
>gb|AF371960.1| Infectious spleen and kidney necrosis virus, complete genome
          Length = 111362

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 479   tccttggccacgcgcatcat 498
             ||||||||||||||||||||
Sbjct: 75685 tccttggccacgcgcatcat 75666
to top
>gb|AC135599.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0045P14, complete sequence
          Length = 121894

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   tacgtagtacgtacggttcc 137
             ||||||||||||||||||||
Sbjct: 74015 tacgtagtacgtacggttcc 73996
to top
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04,
              complete sequence
          Length = 141001

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 426    gcgccatggtgacgaacgcc 445
              ||||||||||||||||||||
Sbjct: 131528 gcgccatggtgacgaacgcc 131509
to top
>gb|AY532606.1| Rock bream iridovirus strain RBIV-KOR-TY1 from South Korea, complete
             genome
          Length = 112080

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 479   tccttggccacgcgcatcat 498
             ||||||||||||||||||||
Sbjct: 75209 tccttggccacgcgcatcat 75190
to top
>gb|AC095996.9| Rattus norvegicus 18 BAC CH230-13K4 (Children's Hospital Oakland
             Research Institute Rat (BN/SsNHsd/MCW) BAC library)
             complete sequence
          Length = 54068

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    gtcaaagtacacaaaacatc 53
             ||||||||||||||||||||
Sbjct: 29092 gtcaaagtacacaaaacatc 29073
to top
>gb|AC121292.9| Mus musculus chromosome 1, clone RP23-172B15, complete sequence
          Length = 193192

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    actactaccagtagtcctaa 161
              ||||||||||||||||||||
Sbjct: 151572 actactaccagtagtcctaa 151553
to top
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 383     ccggcgatgatgccgttggcgatg 406
               ||||||| ||||||||||||||||
Sbjct: 2750505 ccggcgacgatgccgttggcgatg 2750528
to top
>ref|XM_418938.1| PREDICTED: Gallus gallus similar to tRNA selenocysteine associated
           protein (LOC420849), mRNA
          Length = 1319

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 137 ctactactactaccagtagt 156
           ||||||||||||||||||||
Sbjct: 402 ctactactactaccagtagt 421
to top
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 392     atgccgttggcgatggagaaggtgagcggcat 423
               ||||||||||| |||||| |||||| ||||||
Sbjct: 4967133 atgccgttggcaatggagtaggtgaacggcat 4967102
to top
>gb|DQ118403.1| Uncultured euryarchaeote Alv-FOS1 fosmid genomic sequence
          Length = 40482

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 166   atgtcacgatgctccgtgtt 185
             ||||||||||||||||||||
Sbjct: 12497 atgtcacgatgctccgtgtt 12478
to top
>ref|XM_754701.1| Ustilago maydis 521 hypothetical protein (UM03647.1) partial mRNA
          Length = 1185

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 388  gatgatgccgttggcgatgg 407
            ||||||||||||||||||||
Sbjct: 1002 gatgatgccgttggcgatgg 983
to top
>emb|AL157879.7| Human DNA sequence from clone RP11-110H4 on chromosome 5, complete
              sequence
          Length = 161460

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     tcaaagtacacaaaacatca 54
              ||||||||||||||||||||
Sbjct: 117471 tcaaagtacacaaaacatca 117452
to top
>gb|AC093243.2| Homo sapiens chromosome 5 clone RP11-110H4, complete sequence
          Length = 161460

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     tcaaagtacacaaaacatca 54
              ||||||||||||||||||||
Sbjct: 117470 tcaaagtacacaaaacatca 117451
to top
>gb|AC140139.2| Homo sapiens chromosome 5 clone RP11-1417I21, complete sequence
          Length = 216245

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tcaaagtacacaaaacatca 54
             ||||||||||||||||||||
Sbjct: 69890 tcaaagtacacaaaacatca 69871
to top
>gb|AC139776.2| Homo sapiens chromosome 5 clone RP11-1005E12, complete sequence
          Length = 217545

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tcaaagtacacaaaacatca 54
             ||||||||||||||||||||
Sbjct: 56960 tcaaagtacacaaaacatca 56941
to top
>gb|AC139495.2| Homo sapiens chromosome 5 clone RP11-848G14, complete sequence
          Length = 185911

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tcaaagtacacaaaacatca 54
             ||||||||||||||||||||
Sbjct: 67839 tcaaagtacacaaaacatca 67820
to top
>gb|AC139272.3| Homo sapiens chromosome 5 clone RP11-589F5, complete sequence
          Length = 179723

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tcaaagtacacaaaacatca 54
             ||||||||||||||||||||
Sbjct: 40671 tcaaagtacacaaaacatca 40652
to top
>gb|AC138959.2| Homo sapiens chromosome 5 clone RP11-880C13, complete sequence
          Length = 186787

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     tcaaagtacacaaaacatca 54
              ||||||||||||||||||||
Sbjct: 121507 tcaaagtacacaaaacatca 121488
to top
>gb|AC138866.2| Homo sapiens chromosome 5 clone RP11-1415C14, complete sequence
          Length = 213824

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     tcaaagtacacaaaacatca 54
              ||||||||||||||||||||
Sbjct: 135883 tcaaagtacacaaaacatca 135864
to top
>gb|AC146949.1| Homo sapiens chromosome 5 clone RP11-1198D22, complete sequence
          Length = 205574

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tcaaagtacacaaaacatca 54
             ||||||||||||||||||||
Sbjct: 69198 tcaaagtacacaaaacatca 69217
to top
>gb|AC145129.2| Homo sapiens chromosome 5 clone RP11-1080P5, complete sequence
          Length = 171363

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     tcaaagtacacaaaacatca 54
              ||||||||||||||||||||
Sbjct: 138164 tcaaagtacacaaaacatca 138145
to top
>gb|AC145034.2| Homo sapiens chromosome 5 clone RP11-1414O21, complete sequence
          Length = 210205

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tcaaagtacacaaaacatca 54
             ||||||||||||||||||||
Sbjct: 35263 tcaaagtacacaaaacatca 35244
to top
>gb|AC146944.1| Homo sapiens chromosome 5 clone RP11-497H16, complete sequence
          Length = 196579

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     tcaaagtacacaaaacatca 54
              ||||||||||||||||||||
Sbjct: 163380 tcaaagtacacaaaacatca 163361
to top
>gb|AC138957.2| Homo sapiens chromosome 5 clone RP11-846E4, complete sequence
          Length = 177801

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     tcaaagtacacaaaacatca 54
              ||||||||||||||||||||
Sbjct: 100578 tcaaagtacacaaaacatca 100559
to top
>gb|AC139505.2| Homo sapiens chromosome 5 clone RP11-910M8, complete sequence
          Length = 202970

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     tcaaagtacacaaaacatca 54
              ||||||||||||||||||||
Sbjct: 123447 tcaaagtacacaaaacatca 123466
to top
>gb|AC138928.2| Homo sapiens chromosome 5 clone RP11-674O19, complete sequence
          Length = 166615

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     tcaaagtacacaaaacatca 54
              ||||||||||||||||||||
Sbjct: 100577 tcaaagtacacaaaacatca 100558
to top
>gb|AC002432.1| Homo sapiens BAC clone CTA-317G18 from 7, complete sequence
          Length = 143427

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     caagaatctcatggagcctt 90
              ||||||||||||||||||||
Sbjct: 118105 caagaatctcatggagcctt 118086
to top
>gb|AC145144.2| Homo sapiens chromosome 5 clone RP11-1432L1, complete sequence
          Length = 211638

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tcaaagtacacaaaacatca 54
             ||||||||||||||||||||
Sbjct: 94767 tcaaagtacacaaaacatca 94786
to top
>gb|AC145102.2| Homo sapiens chromosome 5 clone RP11-696L12, complete sequence
          Length = 186481

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tcaaagtacacaaaacatca 54
             ||||||||||||||||||||
Sbjct: 66027 tcaaagtacacaaaacatca 66046
to top
>gb|AC139510.3| Homo sapiens chromosome 5 clone RP11-977J23, complete sequence
          Length = 179309

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tcaaagtacacaaaacatca 54
             ||||||||||||||||||||
Sbjct: 60703 tcaaagtacacaaaacatca 60722
to top
>gb|AC139507.2| Homo sapiens chromosome 5 clone RP11-937A6, complete sequence
          Length = 175073

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tcaaagtacacaaaacatca 54
             ||||||||||||||||||||
Sbjct: 92642 tcaaagtacacaaaacatca 92623
to top
>gb|AC139463.2| Homo sapiens chromosome 5 clone RPCI-11_1264N5, complete sequence
          Length = 202179

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tcaaagtacacaaaacatca 54
             ||||||||||||||||||||
Sbjct: 17147 tcaaagtacacaaaacatca 17128
to top
>gb|AC139277.2| Homo sapiens chromosome 5 clone RP11-619K7, complete sequence
          Length = 199996

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tcaaagtacacaaaacatca 54
             ||||||||||||||||||||
Sbjct: 33205 tcaaagtacacaaaacatca 33224
to top
>gb|AC138911.2| Homo sapiens chromosome 5 clone RP11-618O22, complete sequence
          Length = 191992

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tcaaagtacacaaaacatca 54
             ||||||||||||||||||||
Sbjct: 96887 tcaaagtacacaaaacatca 96868
to top
>gb|AC132802.2| Homo sapiens chromosome 5 clone CTC-273M15, complete sequence
          Length = 162703

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     tcaaagtacacaaaacatca 54
              ||||||||||||||||||||
Sbjct: 105011 tcaaagtacacaaaacatca 104992
to top
>gb|AY894343.1| Orange-spotted grouper iridovirus, complete genome
          Length = 112636

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 479   tccttggccacgcgcatcat 498
             ||||||||||||||||||||
Sbjct: 75580 tccttggccacgcgcatcat 75561
to top
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16
          Length = 348642

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 394   gccgttggcgatggagaaggtgagcggcatga 425
             |||||||||||||||| | |||| ||||||||
Sbjct: 94991 gccgttggcgatggagtacgtgaacggcatga 94960
to top
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14
          Length = 346301

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 394    gccgttggcgatggagaaggtgagcggcatga 425
              |||||||||||||||| | |||| ||||||||
Sbjct: 168028 gccgttggcgatggagtacgtgaacggcatga 167997
to top
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12
          Length = 349354

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 394   gccgttggcgatggagaaggtgagcggcatga 425
             |||||||||||||||| | |||| ||||||||
Sbjct: 65765 gccgttggcgatggagtacgtgaacggcatga 65796
to top
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29
          Length = 299050

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                          
Query: 391    gatgccgttggcgatggagaaggtgagcggcatgagcgccatggtgacgaacgccgggat 450
              ||||||||||| ||| ||| |||||| |||||| | |  |||||| ||||| ||||||||
Sbjct: 219875 gatgccgttggtgatcgagtaggtgaacggcatcatcagcatggtcacgaaggccgggat 219816
to top
>emb|AL009030.15|HS28I24 Human DNA sequence from clone RP1-28I24 on chromosome 5 Contains the 5'
             end of the spinal muscular dystrophy region gene (SMA3),
             two beta-glucuronidase pseudogenes and two novel
             pseudogenes containing four membrane protein-like protein
             repeats, one CpG islands, ESTs, GSSs and STSs, complete
             sequence
          Length = 222252

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tcaaagtacacaaaacatca 54
             ||||||||||||||||||||
Sbjct: 60231 tcaaagtacacaaaacatca 60212
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>gb|AC182492.2| Pan troglodytes BAC clone CH251-294F23 from chromosome 5, complete
             sequence
          Length = 179551

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tcaaagtacacaaaacatca 54
             ||||||||||||||||||||
Sbjct: 93927 tcaaagtacacaaaacatca 93946
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>gb|AE012449.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 357
            of 460 of the complete genome
          Length = 11450

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 432  tggtgacgaacgccgggatg 451
            ||||||||||||||||||||
Sbjct: 9763 tggtgacgaacgccgggatg 9782
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>gb|AC006069.3| Arabidopsis thaliana chromosome 2 clone T8O11 map rga, complete
             sequence
          Length = 89138

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tcaaagtacacaaaacatca 54
             ||||||||||||||||||||
Sbjct: 24715 tcaaagtacacaaaacatca 24696
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>gb|AC093247.3| Homo sapiens chromosome 5 clone RP11-138M1, complete sequence
          Length = 80828

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tcaaagtacacaaaacatca 54
             ||||||||||||||||||||
Sbjct: 61715 tcaaagtacacaaaacatca 61734
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>emb|CR406308.1| Gallus gallus finished cDNA, clone ChEST864j2
          Length = 1056

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 137 ctactactactaccagtagt 156
           ||||||||||||||||||||
Sbjct: 143 ctactactactaccagtagt 162
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 432     tggtgacgaacgccgggatg 451
               ||||||||||||||||||||
Sbjct: 1014980 tggtgacgaacgccgggatg 1014961
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>gb|AC010237.8|AC010237 Homo sapiens chromosome 5 clone CTC-348J20, complete sequence
          Length = 168814

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tcaaagtacacaaaacatca 54
             ||||||||||||||||||||
Sbjct: 19151 tcaaagtacacaaaacatca 19170
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>emb|BX932376.2| Gallus gallus finished cDNA, clone ChEST96n4
          Length = 1293

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 137 ctactactactaccagtagt 156
           ||||||||||||||||||||
Sbjct: 378 ctactactactaccagtagt 397
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>gb|AC139500.2| Homo sapiens chromosome 5 clone RP11-864E4, complete sequence
          Length = 194350

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tcaaagtacacaaaacatca 54
             ||||||||||||||||||||
Sbjct: 76197 tcaaagtacacaaaacatca 76178
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>gb|AC138827.3| Homo sapiens chromosome 5 clone RP11-1151M9, complete sequence
          Length = 149397

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 35   tcaaagtacacaaaacatca 54
            ||||||||||||||||||||
Sbjct: 5628 tcaaagtacacaaaacatca 5647
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>gb|AC139834.2| Homo sapiens chromosome 5 clone RP11-974F13, complete sequence
          Length = 185457

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 35   tcaaagtacacaaaacatca 54
            ||||||||||||||||||||
Sbjct: 2723 tcaaagtacacaaaacatca 2742
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 374    acgcccaggccggcgatgatgccg 397
              ||||||||||||||||| ||||||
Sbjct: 507929 acgcccaggccggcgatcatgccg 507952
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>emb|BX950487.1| Gallus gallus finished cDNA, clone ChEST544l1
          Length = 786

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 137 ctactactactaccagtagt 156
           ||||||||||||||||||||
Sbjct: 501 ctactactactaccagtagt 520
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>gb|AC140175.2| Homo sapiens chromosome 5 clone RP11-833G1, complete sequence
          Length = 161671

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tcaaagtacacaaaacatca 54
             ||||||||||||||||||||
Sbjct: 66556 tcaaagtacacaaaacatca 66537
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>gb|AC108108.2| Homo sapiens chromosome 5 clone RP11-260M21, complete sequence
          Length = 173597

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tcaaagtacacaaaacatca 54
             ||||||||||||||||||||
Sbjct: 35707 tcaaagtacacaaaacatca 35688
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>gb|AY117439.1| Streptomyces carzinostaticus subsp. neocarzinostaticus neocarzinostatin
             biosynthetic locus, complete sequence
          Length = 92294

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 426   gcgccatggtgacgaacgcc 445
             ||||||||||||||||||||
Sbjct: 66868 gcgccatggtgacgaacgcc 66849
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>gb|AC118459.2| Homo sapiens chromosome 5 clone RP11-124L9, complete sequence
          Length = 146061

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tcaaagtacacaaaacatca 54
             ||||||||||||||||||||
Sbjct: 11716 tcaaagtacacaaaacatca 11735
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>gb|AE004591.1| Pseudomonas aeruginosa PAO1, section 152 of 529 of the complete
            genome
          Length = 11040

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 396  cgttggcgatggagaaggtg 415
            ||||||||||||||||||||
Sbjct: 3701 cgttggcgatggagaaggtg 3682
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>gb|AC137781.2| Homo sapiens chromosome 5 clone RP11-1108I11, complete sequence
          Length = 161893

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tcaaagtacacaaaacatca 54
             ||||||||||||||||||||
Sbjct: 42517 tcaaagtacacaaaacatca 42498
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 374     acgcccaggccggcgatgatgccg 397
               ||||||||| ||||||||||||||
Sbjct: 2314726 acgcccagggcggcgatgatgccg 2314749
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>gb|AC138409.1| Homo sapiens chromosome 5 clone RP11-1023L17, complete sequence
          Length = 187740

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     tcaaagtacacaaaacatca 54
              ||||||||||||||||||||
Sbjct: 122181 tcaaagtacacaaaacatca 122162
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>gb|AC131392.2| Homo sapiens chromosome 5 clone RP11-98J23, complete sequence
          Length = 154803

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tcaaagtacacaaaacatca 54
             ||||||||||||||||||||
Sbjct: 55896 tcaaagtacacaaaacatca 55877
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 396     cgttggcgatggagaaggtg 415
               ||||||||||||||||||||
Sbjct: 1722974 cgttggcgatggagaaggtg 1722993
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>gb|AC134334.3| Mus musculus BAC clone RP24-143M4 from 9, complete sequence
          Length = 158518

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 6     aatcaatgtgagcattgccatcat 29
             |||||||||||| |||||||||||
Sbjct: 40063 aatcaatgtgagaattgccatcat 40040
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>gb|AC154280.1| Mus musculus BAC clone RP24-271G1 from 9, complete sequence
          Length = 159922

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 6     aatcaatgtgagcattgccatcat 29
             |||||||||||| |||||||||||
Sbjct: 39763 aatcaatgtgagaattgccatcat 39786
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>gb|AC157664.2| Gallus gallus BAC clone CH261-174B17 from chromosome unknown, complete
              sequence
          Length = 214968

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 86     gccttttctttccaagcaca 105
              ||||||||||||||||||||
Sbjct: 191214 gccttttctttccaagcaca 191195
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>gb|AC132801.2| Homo sapiens chromosome 5 clone CTC-202O15, complete sequence
          Length = 116702

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tcaaagtacacaaaacatca 54
             ||||||||||||||||||||
Sbjct: 70425 tcaaagtacacaaaacatca 70406
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>dbj|AP004547.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT31L24, TM0228a,
             complete sequence
          Length = 65103

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 388   gatgatgccgttggcgatgg 407
             ||||||||||||||||||||
Sbjct: 38455 gatgatgccgttggcgatgg 38436
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>gb|AC167020.3| Mus musculus BAC clone RP23-201I6 from chromosome 1, complete sequence
          Length = 209249

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    actactaccagtagtcctaa 161
              ||||||||||||||||||||
Sbjct: 178622 actactaccagtagtcctaa 178641
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>dbj|AB059297.1| Human immunodeficiency virus type 1 env gene for envelope
           glycoprotein, partial cds, clone:pKNI10
          Length = 1095

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 137 ctactactactaccagtagtccta 160
           |||||||||||||||||| |||||
Sbjct: 50  ctactactactaccagtactccta 73


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,742,170
Number of Sequences: 3902068
Number of extensions: 3742170
Number of successful extensions: 74404
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72918
Number of HSP's gapped (non-prelim): 1482
length of query: 511
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 488
effective length of database: 17,143,297,704
effective search space: 8365929279552
effective search space used: 8365929279552
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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