ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart08d03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_189879.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1077 Score = 406 bits (205), Expect = e-110 Identities = 310/345 (89%) Strand = Plus / Minus Query: 202 agccttggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatc 261 |||||||| |||| ||| ||||| ||||||||||| |||| |||||| |||||||| || Sbjct: 826 agccttggcagcagaagaaagcttggacctcctctttgccaagctctcgctccggcgttc 767 Query: 262 cctctgctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttctt 321 |||||||||||| |||||||| ||||| |||||||||||||| |||||||| |||||||| Sbjct: 766 cctctgctccttgagcctctgggcaagaagcttctggtactcagcagcctccgacttctt 707 Query: 322 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaaggg 381 |||||||||||||||||||||||| || |||||||||||||||||||||||||| | ||| Sbjct: 706 cttggcgatcctcttcttcttgtcagcgattctggcacgcttcctctggagggtgagggg 647 Query: 382 agtcacaagacgctggatcttgggggccttgctcaccttctttcccttcttgttaaggaa 441 ||||||||||||||||||||| || ||||||||||||||||| || |||||| || ||| Sbjct: 646 agtcacaagacgctggatcttaggagccttgctcaccttcttgccattcttggtagtgaa 587 Query: 442 ggtcctgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaag 501 ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||| || Sbjct: 586 tgtcctgcggtaggtgttgacatatttgcggacatcatcatccttggaaaggttgaagag 527 Query: 502 cttcttgatcttcgaagccctcttgggtcccctcatcctgggctt 546 |||| ||||||| || ||||||||||||||||||||||||||||| Sbjct: 526 cttcctgatcttggaggccctcttgggtcccctcatcctgggctt 482
>dbj|AK069465.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022D14, full insert sequence Length = 1078 Score = 406 bits (205), Expect = e-110 Identities = 310/345 (89%) Strand = Plus / Minus Query: 202 agccttggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatc 261 |||||||| |||| ||| ||||| ||||||||||| |||| |||||| |||||||| || Sbjct: 827 agccttggcagcagaagaaagcttggacctcctctttgccaagctctcgctccggcgttc 768 Query: 262 cctctgctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttctt 321 |||||||||||| |||||||| ||||| |||||||||||||| |||||||| |||||||| Sbjct: 767 cctctgctccttgagcctctgggcaagaagcttctggtactcagcagcctccgacttctt 708 Query: 322 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaaggg 381 |||||||||||||||||||||||| || |||||||||||||||||||||||||| | ||| Sbjct: 707 cttggcgatcctcttcttcttgtcagcgattctggcacgcttcctctggagggtgagggg 648 Query: 382 agtcacaagacgctggatcttgggggccttgctcaccttctttcccttcttgttaaggaa 441 ||||||||||||||||||||| || ||||||||||||||||| || |||||| || ||| Sbjct: 647 agtcacaagacgctggatcttaggagccttgctcaccttcttgccattcttggtagtgaa 588 Query: 442 ggtcctgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaag 501 ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||| || Sbjct: 587 tgtcctgcggtaggtgttgacatatttgcggacatcatcatccttggaaaggttgaagag 528 Query: 502 cttcttgatcttcgaagccctcttgggtcccctcatcctgggctt 546 |||| ||||||| || ||||||||||||||||||||||||||||| Sbjct: 527 cttcctgatcttggaggccctcttgggtcccctcatcctgggctt 483
>gb|AF295599.1| Zea mays ribosomal protein s6 RPS6-2 (rps6-2) mRNA, complete cds Length = 1023 Score = 335 bits (169), Expect = 9e-89 Identities = 301/345 (87%) Strand = Plus / Minus Query: 202 agccttggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatc 261 |||||||| ||| ||||| ||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 803 agccttggcggcggcagaaagcttagacctcctcttggccaagctctcactgcggcggtc 744 Query: 262 cctctgctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttctt 321 |||||| || ||||||||||| ||||| |||||||||||||| |||||||| |||||||| Sbjct: 743 cctctgttctttcagcctctgggcaagaagcttctggtactcagcagcctcagacttctt 684 Query: 322 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaaggg 381 ||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 683 cttagcgatcctcttcttcttgtcagcaattctagcacgcttcctctggagggtcaaggg 624 Query: 382 agtcacaagacgctggatcttgggggccttgctcaccttctttcccttcttgttaaggaa 441 |||||||| ||||||||||| || ||||||||||||||||| || |||||| || ||| Sbjct: 623 ggtcacaagccgctggatcttaggtgccttgctcaccttcttgccattcttggtagtgaa 564 Query: 442 ggtcctgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaag 501 ||||||||||| ||||| || || |||| || || |||||||| |||| ||||| || Sbjct: 563 tgtcctgcggtacgtgttcacgtacttgcgcacgtcgtcatcctttgcaagattgaacag 504 Query: 502 cttcttgatcttcgaagccctcttgggtcccctcatcctgggctt 546 |||| ||||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 503 cttcctgatcttggaggcccttttgggacccctcatccttggctt 459
>gb|AY103674.1| Zea mays PCO104001 mRNA sequence Length = 1198 Score = 335 bits (169), Expect = 9e-89 Identities = 301/345 (87%) Strand = Plus / Minus Query: 202 agccttggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatc 261 |||||||| ||| ||||| ||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 931 agccttggcggcggcagaaagcttagacctcctcttggccaagctctcactgcggcggtc 872 Query: 262 cctctgctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttctt 321 |||||| || ||||||||||| ||||| |||||||||||||| |||||||| |||||||| Sbjct: 871 cctctgttctttcagcctctgggcaagaagcttctggtactcagcagcctcagacttctt 812 Query: 322 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaaggg 381 ||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 811 cttagcgatcctcttcttcttgtcagcaattctagcacgcttcctctggagggtcaaggg 752 Query: 382 agtcacaagacgctggatcttgggggccttgctcaccttctttcccttcttgttaaggaa 441 |||||||| ||||||||||| || ||||||||||||||||| || |||||| || ||| Sbjct: 751 ggtcacaagccgctggatcttaggtgccttgctcaccttcttgccattcttggtagtgaa 692 Query: 442 ggtcctgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaag 501 ||||||||||| ||||| || || |||| || || |||||||| |||| ||||| || Sbjct: 691 tgtcctgcggtacgtgttcacgtacttgcgcacgtcgtcatcctttgcaagattgaacag 632 Query: 502 cttcttgatcttcgaagccctcttgggtcccctcatcctgggctt 546 |||| ||||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 631 cttcctgatcttggaggcccttttgggacccctcatccttggctt 587
>gb|U92045.1|ZMU92045 Zea mays ribosomal protein S6 RPS6-1 (rps6-1) mRNA, complete cds Length = 1039 Score = 327 bits (165), Expect = 2e-86 Identities = 300/345 (86%) Strand = Plus / Minus Query: 202 agccttggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatc 261 |||||||| ||| ||||| ||||| |||||||||||||||| |||||| |||||||| || Sbjct: 804 agccttggcggcggcagaaagcttggacctcctcttggccaagctctcgctccggcggtc 745 Query: 262 cctctgctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttctt 321 ||||| |||||||||||||| ||||| |||||||||||||| |||||||| |||||||| Sbjct: 744 tctctgttccttcagcctctgggcaagaagcttctggtactcagcagcctcagacttctt 685 Query: 322 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaaggg 381 ||| | ||||||||||||||||| || ||||| |||||||||||||||||||||||||| Sbjct: 684 cttagttatcctcttcttcttgtcagcgattctagcacgcttcctctggagggtcaaggg 625 Query: 382 agtcacaagacgctggatcttgggggccttgctcaccttctttcccttcttgttaaggaa 441 |||||||| || |||||||| || |||||||| |||||||| || |||||| || ||| Sbjct: 624 tgtcacaagccgttggatcttaggtgccttgctgaccttcttgccgttcttggtagtgaa 565 Query: 442 ggtcctgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaag 501 ||||||||||||||||| || || |||| ||||||||||||||| ||||||||| || Sbjct: 564 tgtcctgcggtatgtgttcacgtacttgcgtacatcatcatccttgttaaggttgaacag 505 Query: 502 cttcttgatcttcgaagccctcttgggtcccctcatcctgggctt 546 ||| ||||||| || ||||||||||| ||||||||||| ||||| Sbjct: 504 ctttctgatcttggaggccctcttgggacccctcatccttggctt 460
>ref|XM_470801.1| Oryza sativa (japonica cultivar-group), mRNA Length = 983 Score = 325 bits (164), Expect = 9e-86 Identities = 296/340 (87%) Strand = Plus / Minus Query: 207 tggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatccctct 266 ||||||||||||| ||||| ||||||||||| |||| ||||||||||| ||| ||||||| Sbjct: 771 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 712 Query: 267 gctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttcttgg 326 ||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 711 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 652 Query: 327 cgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtca 386 | || || | |||||| | ||| ||||| || | ||||||||| || |||| |||||| | Sbjct: 651 caattctttgcttcttctgggcgattctcgccctcttcctctgaagagtcaggggagtga 592 Query: 387 caagacgctggatcttgggggccttgctcaccttctttcccttcttgttaaggaaggtcc 446 |||| | ||||||||| || |||||||| |||||||| || |||||| || |||||| | Sbjct: 591 caagcctctggatcttaggagccttgctaaccttcttgccgttcttggtagtgaaggttc 532 Query: 447 tgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagcttct 506 ||||||| ||||||||||| |||||||||||||||||||| ||||||| || |||||| Sbjct: 531 tgcggtaagtgttgacatacttgcggacatcatcatccttggcaaggttaaacagcttcc 472 Query: 507 tgatcttcgaagccctcttgggtcccctcatcctgggctt 546 ||||||| || ||||||||||||||||||||||||||||| Sbjct: 471 tgatcttagatgccctcttgggtcccctcatcctgggctt 432
>dbj|AK121621.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045B01, full insert sequence Length = 1018 Score = 325 bits (164), Expect = 9e-86 Identities = 296/340 (87%) Strand = Plus / Minus Query: 207 tggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatccctct 266 ||||||||||||| ||||| ||||||||||| |||| ||||||||||| ||| ||||||| Sbjct: 769 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 710 Query: 267 gctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttcttgg 326 ||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 709 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 650 Query: 327 cgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtca 386 | || || | |||||| | ||| ||||| || | ||||||||| || |||| |||||| | Sbjct: 649 caattctttgcttcttctgggcgattctcgccctcttcctctgaagagtcaggggagtga 590 Query: 387 caagacgctggatcttgggggccttgctcaccttctttcccttcttgttaaggaaggtcc 446 |||| | ||||||||| || |||||||| |||||||| || |||||| || |||||| | Sbjct: 589 caagcctctggatcttaggagccttgctaaccttcttgccgttcttggtagtgaaggttc 530 Query: 447 tgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagcttct 506 ||||||| ||||||||||| |||||||||||||||||||| ||||||| || |||||| Sbjct: 529 tgcggtaagtgttgacatacttgcggacatcatcatccttggcaaggttaaacagcttcc 470 Query: 507 tgatcttcgaagccctcttgggtcccctcatcctgggctt 546 ||||||| || ||||||||||||||||||||||||||||| Sbjct: 469 tgatcttagatgccctcttgggtcccctcatcctgggctt 430
>dbj|AK061827.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C07, full insert sequence Length = 990 Score = 325 bits (164), Expect = 9e-86 Identities = 296/340 (87%) Strand = Plus / Minus Query: 207 tggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatccctct 266 ||||||||||||| ||||| ||||||||||| |||| ||||||||||| ||| ||||||| Sbjct: 768 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 709 Query: 267 gctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttcttgg 326 ||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 708 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 649 Query: 327 cgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtca 386 | || || | |||||| | ||| ||||| || | ||||||||| || |||| |||||| | Sbjct: 648 caattctttgcttcttctgggcgattctcgccctcttcctctgaagagtcaggggagtga 589 Query: 387 caagacgctggatcttgggggccttgctcaccttctttcccttcttgttaaggaaggtcc 446 |||| | ||||||||| || |||||||| |||||||| || |||||| || |||||| | Sbjct: 588 caagcctctggatcttaggagccttgctaaccttcttgccgttcttggtagtgaaggttc 529 Query: 447 tgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagcttct 506 ||||||| ||||||||||| |||||||||||||||||||| ||||||| || |||||| Sbjct: 528 tgcggtaagtgttgacatacttgcggacatcatcatccttggcaaggttaaacagcttcc 469 Query: 507 tgatcttcgaagccctcttgggtcccctcatcctgggctt 546 ||||||| || ||||||||||||||||||||||||||||| Sbjct: 468 tgatcttagatgccctcttgggtcccctcatcctgggctt 429
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 281 bits (142), Expect = 1e-72 Identities = 202/222 (90%) Strand = Plus / Minus Query: 202 agccttggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatc 261 |||||||| |||| ||| ||||| ||||||||||| |||| |||||| |||||||| || Sbjct: 25671571 agccttggcagcagaagaaagcttggacctcctctttgccaagctctcgctccggcgttc 25671512 Query: 262 cctctgctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttctt 321 |||||||||||| |||||||| ||||| |||||||||||||| |||||||| |||||||| Sbjct: 25671511 cctctgctccttgagcctctgggcaagaagcttctggtactcagcagcctccgacttctt 25671452 Query: 322 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaaggg 381 |||||||||||||||||||||||| || |||||||||||||||||||||||||| | ||| Sbjct: 25671451 cttggcgatcctcttcttcttgtcagcgattctggcacgcttcctctggagggtgagggg 25671392 Query: 382 agtcacaagacgctggatcttgggggccttgctcaccttctt 423 ||||||||||||||||||||| || ||||||||||||||||| Sbjct: 25671391 agtcacaagacgctggatcttaggagccttgctcaccttctt 25671350 Score = 135 bits (68), Expect = 2e-28 Identities = 95/104 (91%) Strand = Plus / Minus Query: 443 gtcctgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagc 502 ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||| ||| Sbjct: 25671127 gtcctgcggtaggtgttgacatatttgcggacatcatcatccttggaaaggttgaagagc 25671068 Query: 503 ttcttgatcttcgaagccctcttgggtcccctcatcctgggctt 546 ||| ||||||| || ||||||||||||||||||||||||||||| Sbjct: 25671067 ttcctgatcttggaggccctcttgggtcccctcatcctgggctt 25671024
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0594D10 Length = 143200 Score = 281 bits (142), Expect = 1e-72 Identities = 202/222 (90%) Strand = Plus / Minus Query: 202 agccttggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatc 261 |||||||| |||| ||| ||||| ||||||||||| |||| |||||| |||||||| || Sbjct: 125544 agccttggcagcagaagaaagcttggacctcctctttgccaagctctcgctccggcgttc 125485 Query: 262 cctctgctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttctt 321 |||||||||||| |||||||| ||||| |||||||||||||| |||||||| |||||||| Sbjct: 125484 cctctgctccttgagcctctgggcaagaagcttctggtactcagcagcctccgacttctt 125425 Query: 322 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaaggg 381 |||||||||||||||||||||||| || |||||||||||||||||||||||||| | ||| Sbjct: 125424 cttggcgatcctcttcttcttgtcagcgattctggcacgcttcctctggagggtgagggg 125365 Query: 382 agtcacaagacgctggatcttgggggccttgctcaccttctt 423 ||||||||||||||||||||| || ||||||||||||||||| Sbjct: 125364 agtcacaagacgctggatcttaggagccttgctcaccttctt 125323 Score = 135 bits (68), Expect = 2e-28 Identities = 95/104 (91%) Strand = Plus / Minus Query: 443 gtcctgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagc 502 ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||| ||| Sbjct: 125100 gtcctgcggtaggtgttgacatatttgcggacatcatcatccttggaaaggttgaagagc 125041 Query: 503 ttcttgatcttcgaagccctcttgggtcccctcatcctgggctt 546 ||| ||||||| || ||||||||||||||||||||||||||||| Sbjct: 125040 ttcctgatcttggaggccctcttgggtcccctcatcctgggctt 124997
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 200 bits (101), Expect = 3e-48 Identities = 188/217 (86%) Strand = Plus / Plus Query: 207 tggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatccctct 266 ||||||||||||| ||||| ||||||||||| |||| ||||||||||| ||| ||||||| Sbjct: 15460637 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 15460696 Query: 267 gctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttcttgg 326 ||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 15460697 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 15460756 Query: 327 cgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtca 386 | || || | |||||| | ||| ||||| || | ||||||||| || |||| |||||| | Sbjct: 15460757 caattctttgcttcttctgggcgattctcgccctcttcctctgaagagtcaggggagtga 15460816 Query: 387 caagacgctggatcttgggggccttgctcaccttctt 423 |||| | ||||||||| || |||||||| |||||||| Sbjct: 15460817 caagcctctggatcttaggagccttgctaaccttctt 15460853 Score = 135 bits (68), Expect = 2e-28 Identities = 98/108 (90%) Strand = Plus / Plus Query: 439 gaaggtcctgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaa 498 |||||| |||||||| ||||||||||| |||||||||||||||||||| ||||||| || Sbjct: 15461102 gaaggttctgcggtaagtgttgacatacttgcggacatcatcatccttggcaaggttaaa 15461161 Query: 499 aagcttcttgatcttcgaagccctcttgggtcccctcatcctgggctt 546 |||||| ||||||| || ||||||||||||||||||||||||||||| Sbjct: 15461162 cagcttcctgatcttagatgccctcttgggtcccctcatcctgggctt 15461209
>gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genomic sequence, complete sequence Length = 164705 Score = 200 bits (101), Expect = 3e-48 Identities = 188/217 (86%) Strand = Plus / Minus Query: 207 tggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatccctct 266 ||||||||||||| ||||| ||||||||||| |||| ||||||||||| ||| ||||||| Sbjct: 40889 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 40830 Query: 267 gctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttcttgg 326 ||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 40829 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 40770 Query: 327 cgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtca 386 | || || | |||||| | ||| ||||| || | ||||||||| || |||| |||||| | Sbjct: 40769 caattctttgcttcttctgggcgattctcgccctcttcctctgaagagtcaggggagtga 40710 Query: 387 caagacgctggatcttgggggccttgctcaccttctt 423 |||| | ||||||||| || |||||||| |||||||| Sbjct: 40709 caagcctctggatcttaggagccttgctaaccttctt 40673 Score = 135 bits (68), Expect = 2e-28 Identities = 98/108 (90%) Strand = Plus / Minus Query: 439 gaaggtcctgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaa 498 |||||| |||||||| ||||||||||| |||||||||||||||||||| ||||||| || Sbjct: 40424 gaaggttctgcggtaagtgttgacatacttgcggacatcatcatccttggcaaggttaaa 40365 Query: 499 aagcttcttgatcttcgaagccctcttgggtcccctcatcctgggctt 546 |||||| ||||||| || ||||||||||||||||||||||||||||| Sbjct: 40364 cagcttcctgatcttagatgccctcttgggtcccctcatcctgggctt 40317
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 200 bits (101), Expect = 3e-48 Identities = 188/217 (86%) Strand = Plus / Plus Query: 207 tggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatccctct 266 ||||||||||||| ||||| ||||||||||| |||| ||||||||||| ||| ||||||| Sbjct: 15455171 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 15455230 Query: 267 gctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttcttgg 326 ||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 15455231 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 15455290 Query: 327 cgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtca 386 | || || | |||||| | ||| ||||| || | ||||||||| || |||| |||||| | Sbjct: 15455291 caattctttgcttcttctgggcgattctcgccctcttcctctgaagagtcaggggagtga 15455350 Query: 387 caagacgctggatcttgggggccttgctcaccttctt 423 |||| | ||||||||| || |||||||| |||||||| Sbjct: 15455351 caagcctctggatcttaggagccttgctaaccttctt 15455387 Score = 135 bits (68), Expect = 2e-28 Identities = 98/108 (90%) Strand = Plus / Plus Query: 439 gaaggtcctgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaa 498 |||||| |||||||| ||||||||||| |||||||||||||||||||| ||||||| || Sbjct: 15455636 gaaggttctgcggtaagtgttgacatacttgcggacatcatcatccttggcaaggttaaa 15455695 Query: 499 aagcttcttgatcttcgaagccctcttgggtcccctcatcctgggctt 546 |||||| ||||||| || ||||||||||||||||||||||||||||| Sbjct: 15455696 cagcttcctgatcttagatgccctcttgggtcccctcatcctgggctt 15455743
>emb|AJ277533.1|AOF277533 Asparagus officinalis mRNA for S6 ribosomal protein (rps6 gene) Length = 959 Score = 165 bits (83), Expect = 2e-37 Identities = 272/335 (81%) Strand = Plus / Minus Query: 212 gcagcagacagcttcgacctcctcttggccatgctctcactccggcgatccctctgctcc 271 |||||||| ||| | |||||| |||| |||| ||||||||| || || |||||||||||| Sbjct: 750 gcagcagagagcctggacctcttctttgccaagctctcactgcgtcggtccctctgctcc 691 Query: 272 ttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttcttggcgatc 331 || |||||| ||||| ||||||||||| |||||||| || || || |||||| | Sbjct: 690 ttgagcctcgaggcaaggagcttctggtattctgcagcttcagatttggccttggcaact 631 Query: 332 ctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaaga 391 ||||||||||| || ||||||||||| |||||||| || | |||||||||||||||||| Sbjct: 630 ctcttcttcttctctgcaattctggctcgcttcctttgcaaggtcaagggagtcacaagc 571 Query: 392 cgctggatcttgggggccttgctcaccttctttcccttcttgttaaggaaggtcctgcgg 451 | |||||| || || ||||| || ||||||| ||||||||| ||||||||| ||| Sbjct: 570 ctctggatttttggtgccttactgcaggtctttcctttcttgttagtgaaggtcctacgg 511 Query: 452 tatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagcttcttgatc 511 || ||||||||||| |||| |||||||| ||||| ||||||||| ||||| ||| Sbjct: 510 taagtgttgacatacttgcgtacatcatcttccttagaaaggttgaacagcttacggatt 451 Query: 512 ttcgaagccctcttgggtcccctcatcctgggctt 546 || || |||||||| ||||| |||||||| ||||| Sbjct: 450 ttggaggccctcttaggtcctctcatccttggctt 416
>ref|NM_121074.2| Arabidopsis thaliana EMB3010; structural constituent of ribosome AT5G10360 (EMB3010) mRNA, complete cds Length = 1095 Score = 137 bits (69), Expect = 4e-29 Identities = 174/209 (83%) Strand = Plus / Minus Query: 227 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 286 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 795 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 736 Query: 287 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 346 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 735 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 676 Query: 347 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 406 |||||||| || | |||||||||||||||||| ||||||||||| | ||||||||| || Sbjct: 675 gcaattctagctctcttcctctggagggtcaatggagtcacaagcctctggatcttagga 616 Query: 407 gccttgctcaccttctttcccttcttgtt 435 |||||||| |||||||| ||||||||||| Sbjct: 615 gccttgctaaccttcttgcccttcttgtt 587
>gb|AY093783.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds Length = 750 Score = 137 bits (69), Expect = 4e-29 Identities = 174/209 (83%) Strand = Plus / Minus Query: 227 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 286 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 710 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 651 Query: 287 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 346 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 650 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 591 Query: 347 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 406 |||||||| || | |||||||||||||||||| ||||||||||| | ||||||||| || Sbjct: 590 gcaattctagctctcttcctctggagggtcaatggagtcacaagcctctggatcttagga 531 Query: 407 gccttgctcaccttctttcccttcttgtt 435 |||||||| |||||||| ||||||||||| Sbjct: 530 gccttgctaaccttcttgcccttcttgtt 502
>gb|AY057634.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds Length = 993 Score = 137 bits (69), Expect = 4e-29 Identities = 174/209 (83%) Strand = Plus / Minus Query: 227 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 286 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 795 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 736 Query: 287 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 346 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 735 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 676 Query: 347 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 406 |||||||| || | |||||||||||||||||| ||||||||||| | ||||||||| || Sbjct: 675 gcaattctagctctcttcctctggagggtcaatggagtcacaagcctctggatcttagga 616 Query: 407 gccttgctcaccttctttcccttcttgtt 435 |||||||| |||||||| ||||||||||| Sbjct: 615 gccttgctaaccttcttgcccttcttgtt 587
>gb|AY045594.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds Length = 993 Score = 137 bits (69), Expect = 4e-29 Identities = 174/209 (83%) Strand = Plus / Minus Query: 227 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 286 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 795 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 736 Query: 287 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 346 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 735 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 676 Query: 347 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 406 |||||||| || | |||||||||||||||||| ||||||||||| | ||||||||| || Sbjct: 675 gcaattctagctctcttcctctggagggtcaatggagtcacaagcctctggatcttagga 616 Query: 407 gccttgctcaccttctttcccttcttgtt 435 |||||||| |||||||| ||||||||||| Sbjct: 615 gccttgctaaccttcttgcccttcttgtt 587
>emb|BX832002.1|CNS0A26R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH45ZC11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 969 Score = 137 bits (69), Expect = 4e-29 Identities = 174/209 (83%) Strand = Plus / Minus Query: 227 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 286 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 778 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 719 Query: 287 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 346 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 718 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 659 Query: 347 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 406 |||||||| || | |||||||||||||||||| ||||||||||| | ||||||||| || Sbjct: 658 gcaattctagctctcttcctctggagggtcaatggagtcacaagcctctggatcttagga 599 Query: 407 gccttgctcaccttctttcccttcttgtt 435 |||||||| |||||||| ||||||||||| Sbjct: 598 gccttgctaaccttcttgcccttcttgtt 570
>emb|BX830696.1|CNS0A0OB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS15ZE05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 947 Score = 137 bits (69), Expect = 4e-29 Identities = 174/209 (83%) Strand = Plus / Minus Query: 227 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 286 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 776 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 717 Query: 287 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 346 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 716 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 657 Query: 347 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 406 |||||||| || | |||||||||||||||||| ||||||||||| | ||||||||| || Sbjct: 656 gcaattctagctctcttcctctggagggtcaatggagtcacaagcctctggatcttagga 597 Query: 407 gccttgctcaccttctttcccttcttgtt 435 |||||||| |||||||| ||||||||||| Sbjct: 596 gccttgctaaccttcttgcccttcttgtt 568
>emb|BX832475.1|CNS0A24D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH75ZG03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 645 Score = 129 bits (65), Expect = 1e-26 Identities = 173/209 (82%) Strand = Plus / Minus Query: 227 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 286 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 446 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 387 Query: 287 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 346 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 386 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 327 Query: 347 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 406 |||||||| || | ||||||||||||||| || ||||||||||| | ||||||||| || Sbjct: 326 gcaattctagctctcttcctctggagggtaaatggagtcacaagcctctggatcttagga 267 Query: 407 gccttgctcaccttctttcccttcttgtt 435 |||||||| |||||||| ||||||||||| Sbjct: 266 gccttgctaaccttcttgcccttcttgtt 238
>emb|BX832457.1|CNS0A241 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZH01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 689 Score = 129 bits (65), Expect = 1e-26 Identities = 173/209 (82%) Strand = Plus / Minus Query: 227 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 286 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 456 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 397 Query: 287 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 346 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 396 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 337 Query: 347 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 406 |||||||| || | |||||||||||||||||| ||||| ||||| | ||||||||| || Sbjct: 336 gcaattctagctctcttcctctggagggtcaatggagtaacaagcctctggatcttagga 277 Query: 407 gccttgctcaccttctttcccttcttgtt 435 |||||||| |||||||| ||||||||||| Sbjct: 276 gccttgctaaccttcttgcccttcttgtt 248
>emb|BX829995.1|CNS0A1FC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB52ZB07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 981 Score = 129 bits (65), Expect = 1e-26 Identities = 173/209 (82%) Strand = Plus / Minus Query: 227 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 286 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 776 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 717 Query: 287 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 346 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 716 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 657 Query: 347 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 406 |||||||| || | |||||||||||||||||| ||||| ||||| | ||||||||| || Sbjct: 656 gcaattctagctctcttcctctggagggtcaatggagttacaagcctctggatcttagga 597 Query: 407 gccttgctcaccttctttcccttcttgtt 435 |||||||| |||||||| ||||||||||| Sbjct: 596 gccttgctaaccttcttgcccttcttgtt 568
>gb|AC155341.1| Brassica rapa subsp. pekinensis chromosome 6 clone KBrH004D11, complete sequence Length = 106476 Score = 123 bits (62), Expect = 6e-25 Identities = 173/210 (82%) Strand = Plus / Plus Query: 227 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 286 |||||| ||||||||| |||||||| |||||||| | ||||||||| ||||| || Sbjct: 89251 gacctcttcttggccaaactctcactacggcgatcacgctgctccttaagcctggaggcg 89310 Query: 287 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 346 || |||||||||||||| || || || | || ||| || |||||||||||||||||| Sbjct: 89311 agaagcttctggtactcagccgcatcagcgttagccttagcaatcctcttcttcttgtcg 89370 Query: 347 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 406 |||||||| || | ||||||||| || ||||| ||||||||||| | ||||||||||||| Sbjct: 89371 gcaattctagctctcttcctctgaagagtcaaaggagtcacaagcctctggatcttgggg 89430 Query: 407 gccttgctcaccttctttcccttcttgtta 436 || |||||||| | ||| || ||||||||| Sbjct: 89431 gctttgctcacttccttacctttcttgtta 89460 Score = 69.9 bits (35), Expect = 8e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 472 gacatcatcatccttgccaaggttgaaaagcttcttgatcttcgaagccctcttgggtcc 531 ||||||||||||||| ||||||||||| || || |||||| ||||| ||||| ||||| Sbjct: 89508 gacatcatcatcctttccaaggttgaacagtttacggatcttagaagctctcttaggtcc 89567 Query: 532 cctcatcctgggctt 546 ||||||||| ||||| Sbjct: 89568 cctcatcctcggctt 89582
>emb|Y14052.1|ATY14052 Arabidopsis thaliana mRNA for ribosomal protein S6 Length = 957 Score = 123 bits (62), Expect = 6e-25 Identities = 101/114 (88%) Strand = Plus / Minus Query: 322 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaaggg 381 |||||| || |||||||||||||| |||||||| || | |||||||||||||||||| || Sbjct: 615 cttggctattctcttcttcttgtcagcaattctagctctcttcctctggagggtcaatgg 556 Query: 382 agtcacaagacgctggatcttgggggccttgctcaccttctttcccttcttgtt 435 ||||||||| | ||||||||| || |||||||| |||||||| ||||||||||| Sbjct: 555 agtcacaagcctctggatcttaggagccttgctaaccttcttgcccttcttgtt 502
>emb|AL353995.1|ATF12B17 Arabidopsis thaliana DNA chromosome 5, BAC clone F12B17 (ESSA project) Length = 113053 Score = 121 bits (61), Expect = 3e-24 Identities = 163/197 (82%) Strand = Plus / Minus Query: 227 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 286 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 106087 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 106028 Query: 287 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 346 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 106027 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 105968 Query: 347 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 406 |||||||| || | |||||||||||||||||| ||||||||||| | ||||||||| || Sbjct: 105967 gcaattctagctctcttcctctggagggtcaatggagtcacaagcctctggatcttagga 105908 Query: 407 gccttgctcaccttctt 423 |||||||| |||||||| Sbjct: 105907 gccttgctaaccttctt 105891
>gb|DQ191669.1| Solanum tuberosum ribosomal protein S6-like protein mRNA, complete cds Length = 1032 Score = 117 bits (59), Expect = 4e-23 Identities = 203/251 (80%) Strand = Plus / Minus Query: 290 agcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcggca 349 |||||||| || || ||||| |||||||| |||||| || |||||||||||||||||| Sbjct: 698 agcttctgataatcagcagcttctgacttagccttggcaattctcttcttcttgtcggca 639 Query: 350 attctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggggcc 409 ||||| || | |||||||||||| ||||| || || || || | ||||||||| || ||| Sbjct: 638 attcttgctctcttcctctggagagtcaatggtgttaccagcctctggatcttaggagcc 579 Query: 410 ttgctcaccttctttcccttcttgttaaggaaggtcctgcggtatgtgttgacatagctg 469 ||||| |||| || ||||| ||||| ||| || | ||| || ||||||||||| | Sbjct: 578 ttgctaacctctttcccctttttgtttgtgaatgttcggcgataggtgttgacatacttc 519 Query: 470 cggacatcatcatccttgccaaggttgaaaagcttcttgatcttcgaagccctcttgggt 529 | ||||| |||||||| ||||||||||| |||||| | ||||| |||||||| ||||| Sbjct: 518 ctaacatcgtcatcctttccaaggttgaagagcttcctaatcttggaagcccttttggga 459 Query: 530 cccctcatcct 540 || |||||||| Sbjct: 458 cctctcatcct 448
>gb|AY293401.1| Brassica napus ribosomal protein S6 (RPS6) mRNA, complete cds Length = 980 Score = 93.7 bits (47), Expect = 6e-16 Identities = 170/211 (80%) Strand = Plus / Minus Query: 329 atcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcaca 388 ||||||||||||||||| || ||||| || | ||||||||| |||||||| ||||||||| Sbjct: 665 atcctcttcttcttgtcagcgattctagctctcttcctctgaagggtcaacggagtcaca 606 Query: 389 agacgctggatcttgggggccttgctcaccttctttcccttcttgttaaggaaggtcctg 448 || | |||||||||||| || |||||||| | ||| || |||||||| ||| | | | Sbjct: 605 agcctctggatcttgggagctttgctcacttccttgcctttcttgtttgtgaacttgcgg 546 Query: 449 cggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagcttcttg 508 ||||| |||||||| || | | ||||||||| ||||| | |||||| || || | Sbjct: 545 cggtaagtgttgacgtacttcctgacatcatcctccttaatgaagttgaacagtttacgg 486 Query: 509 atcttcgaagccctcttgggtcccctcatcc 539 ||||| ||||| ||||||||||||||||||| Sbjct: 485 atcttggaagctctcttgggtcccctcatcc 455
>emb|BX831797.1|CNS0A23Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH2ZH10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 692 Score = 85.7 bits (43), Expect = 1e-13 Identities = 98/115 (85%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 322 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaaggg 381 ||||||||| |||||||||||||| |||||||| || | ||||||||||||||| || || Sbjct: 363 cttggcgattctcttcttcttgtcagcaattctagctctcttcctctggagggtaaatgg 304 Query: 382 agtcacaagacgc-tggatcttgggggccttgctcaccttctttcccttcttgtt 435 |||||| | || |||||||| || ||||||| |||||||| ||||||||||| Sbjct: 303 agtcaccaagcgtgtggatcttaggacccttgctaaccttcttgcccttcttgtt 249
>emb|AJ010227.1|CAR010227 Cicer arietinum mRNA for 40S ribosomal protein S6, partial Length = 920 Score = 85.7 bits (43), Expect = 1e-13 Identities = 124/151 (82%) Strand = Plus / Minus Query: 234 tcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgcaagcagct 293 |||| |||| ||||||||| ||||| |||||||||||||||| || |||||| || | Sbjct: 593 tctttgccaagctctcacttcggcgttccctctgctccttcaatctggatgcaaggagtt 534 Query: 294 tctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcggcaattc 353 | || |||||||| |||||||| || |||||| || ||||||||||| || ||||||| Sbjct: 533 tttgatactctgctgcctctgattttgccttggcaattctcttcttcttatctgcaattc 474 Query: 354 tggcacgcttcctctggagggtcaagggagt 384 | || |||||||| ||||| ||||| ||||| Sbjct: 473 ttgctcgcttcctttggagtgtcaaaggagt 443
>gb|AY105798.1| Zea mays PCO089449 mRNA sequence Length = 777 Score = 85.7 bits (43), Expect = 1e-13 Identities = 72/81 (88%), Gaps = 3/81 (3%) Strand = Plus / Minus Query: 263 ctctgctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttc 322 ||||| |||||||||||||| ||||| ||||| |||||||| |||||||| || |||| Sbjct: 725 ctctgttccttcagcctctgagcaagaagcttttggtactcggcagcctcaga---cttc 669 Query: 323 ttggcgatcctcttcttcttg 343 ||||||||||||||||||||| Sbjct: 668 ttggcgatcctcttcttcttg 648
>ref|NM_119319.3| Arabidopsis thaliana RPS6 (RIBOSOMAL PROTEIN S6); structural constituent of ribosome AT4G31700 (RPS6) mRNA, complete cds Length = 993 Score = 83.8 bits (42), Expect = 6e-13 Identities = 126/154 (81%) Strand = Plus / Minus Query: 333 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagac 392 ||||||||||||| |||||||| || | ||||||||| || ||||| || |||||||| | Sbjct: 615 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaatggggtcacaagcc 556 Query: 393 gctggatcttgggggccttgctcaccttctttcccttcttgttaaggaaggtcctgcggt 452 ||||||||| ||||| ||||| || | ||| ||||||||||| ||| | | ||||| Sbjct: 555 tctggatcttaggggctttgctaacttccttgcccttcttgtttgtgaacttgcggcggt 496 Query: 453 atgtgttgacatagctgcggacatcatcatcctt 486 | |||||||||||| | | ||||||||| ||||| Sbjct: 495 aagtgttgacataggtcctgacatcatcttcctt 462
>gb|BT000693.1| Arabidopsis thaliana clone RAFL07-09-P18 (R10989) putative ribosomal protein S6 (At4g31700) mRNA, complete cds Length = 962 Score = 83.8 bits (42), Expect = 6e-13 Identities = 126/154 (81%) Strand = Plus / Minus Query: 333 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagac 392 ||||||||||||| |||||||| || | ||||||||| || ||||| || |||||||| | Sbjct: 617 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaatggggtcacaagcc 558 Query: 393 gctggatcttgggggccttgctcaccttctttcccttcttgttaaggaaggtcctgcggt 452 ||||||||| ||||| ||||| || | ||| ||||||||||| ||| | | ||||| Sbjct: 557 tctggatcttaggggctttgctaacttccttgcccttcttgtttgtgaacttgcggcggt 498 Query: 453 atgtgttgacatagctgcggacatcatcatcctt 486 | |||||||||||| | | ||||||||| ||||| Sbjct: 497 aagtgttgacataggtcctgacatcatcttcctt 464
>gb|AY113983.1| Arabidopsis thaliana putative ribosomal protein S6 (At4g31700) mRNA, complete cds Length = 784 Score = 83.8 bits (42), Expect = 6e-13 Identities = 126/154 (81%) Strand = Plus / Minus Query: 333 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagac 392 ||||||||||||| |||||||| || | ||||||||| || ||||| || |||||||| | Sbjct: 604 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaatggggtcacaagcc 545 Query: 393 gctggatcttgggggccttgctcaccttctttcccttcttgttaaggaaggtcctgcggt 452 ||||||||| ||||| ||||| || | ||| ||||||||||| ||| | | ||||| Sbjct: 544 tctggatcttaggggctttgctaacttccttgcccttcttgtttgtgaacttgcggcggt 485 Query: 453 atgtgttgacatagctgcggacatcatcatcctt 486 | |||||||||||| | | ||||||||| ||||| Sbjct: 484 aagtgttgacataggtcctgacatcatcttcctt 451
>gb|AY050803.1| Arabidopsis thaliana putative ribosomal protein S6 (At4g31700) mRNA, complete cds Length = 989 Score = 83.8 bits (42), Expect = 6e-13 Identities = 126/154 (81%) Strand = Plus / Minus Query: 333 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagac 392 ||||||||||||| |||||||| || | ||||||||| || ||||| || |||||||| | Sbjct: 611 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaatggggtcacaagcc 552 Query: 393 gctggatcttgggggccttgctcaccttctttcccttcttgttaaggaaggtcctgcggt 452 ||||||||| ||||| ||||| || | ||| ||||||||||| ||| | | ||||| Sbjct: 551 tctggatcttaggggctttgctaacttccttgcccttcttgtttgtgaacttgcggcggt 492 Query: 453 atgtgttgacatagctgcggacatcatcatcctt 486 | |||||||||||| | | ||||||||| ||||| Sbjct: 491 aagtgttgacataggtcctgacatcatcttcctt 458
>emb|BX826399.1|CNS0A4KZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB21ZD05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 938 Score = 83.8 bits (42), Expect = 6e-13 Identities = 126/154 (81%) Strand = Plus / Minus Query: 333 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagac 392 ||||||||||||| |||||||| || | ||||||||| || ||||| || |||||||| | Sbjct: 600 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaatggggtcacaagcc 541 Query: 393 gctggatcttgggggccttgctcaccttctttcccttcttgttaaggaaggtcctgcggt 452 ||||||||| ||||| ||||| || | ||| ||||||||||| ||| | | ||||| Sbjct: 540 tctggatcttaggggctttgctaacttccttgcccttcttgtttgtgaacttgcggcggt 481 Query: 453 atgtgttgacatagctgcggacatcatcatcctt 486 | |||||||||||| | | ||||||||| ||||| Sbjct: 480 aagtgttgacataggtcctgacatcatcttcctt 447
>emb|BX827692.1|CNS0A3WM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH10ZH02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 580 Score = 83.8 bits (42), Expect = 6e-13 Identities = 126/154 (81%) Strand = Plus / Minus Query: 333 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagac 392 ||||||||||||| |||||||| || | ||||||||| || ||||| || |||||||| | Sbjct: 222 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaatggggtcacaagcc 163 Query: 393 gctggatcttgggggccttgctcaccttctttcccttcttgttaaggaaggtcctgcggt 452 ||||||||| ||||| ||||| || | ||| ||||||||||| ||| | | ||||| Sbjct: 162 tctggatcttaggggctttgctaacttccttgcccttcttgtttgtgaacttgcggcggt 103 Query: 453 atgtgttgacatagctgcggacatcatcatcctt 486 | |||||||||||| | | ||||||||| ||||| Sbjct: 102 aagtgttgacataggtcctgacatcatcttcctt 69
>gb|AF034217.1|AF034217 Arabidopsis thaliana ribosomal protein S6 (rps6) mRNA, complete cds Length = 945 Score = 83.8 bits (42), Expect = 6e-13 Identities = 126/154 (81%) Strand = Plus / Minus Query: 333 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagac 392 ||||||||||||| |||||||| || | ||||||||| || ||||| || |||||||| | Sbjct: 604 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaatggggtcacaagcc 545 Query: 393 gctggatcttgggggccttgctcaccttctttcccttcttgttaaggaaggtcctgcggt 452 ||||||||| ||||| ||||| || | ||| ||||||||||| ||| | | ||||| Sbjct: 544 tctggatcttaggggctttgctaacttccttgcccttcttgtttgtgaacttgcggcggt 485 Query: 453 atgtgttgacatagctgcggacatcatcatcctt 486 | |||||||||||| | | ||||||||| ||||| Sbjct: 484 aagtgttgacataggtcctgacatcatcttcctt 451
>gb|BT014365.1| Lycopersicon esculentum clone 133651F, mRNA sequence Length = 1065 Score = 79.8 bits (40), Expect = 9e-12 Identities = 172/216 (79%) Strand = Plus / Minus Query: 322 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaaggg 381 |||||| || |||||||||||||| || ||||| || | ||||||||| || ||||| || Sbjct: 686 cttggcaattctcttcttcttgtcagcgattcttgctctcttcctctgaagagtcaatgg 627 Query: 382 agtcacaagacgctggatcttgggggccttgctcaccttctttcccttcttgttaaggaa 441 || || || | ||||||||| || |||||||| |||| || ||||| ||||| ||| Sbjct: 626 tgttaccagcctctggatcttaggagccttgctaacctctttcccctttttgtttgtgaa 567 Query: 442 ggtcctgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaag 501 || | ||| || ||||| ||||| | | |||||||||||| || ||||||||||| || Sbjct: 566 tgttcggcgataggtgttaacatacttcctgacatcatcatcttttccaaggttgaagag 507 Query: 502 cttcttgatcttcgaagccctcttgggtcccctcat 537 ||| | ||||| |||||||| |||||||| ||||| Sbjct: 506 cttgctaatcttggaagcccttttgggtcctctcat 471
>gb|AY453394.1| Glycine max ribosomal protein S6 (RPS6) mRNA, complete cds Length = 1020 Score = 77.8 bits (39), Expect = 3e-11 Identities = 117/143 (81%) Strand = Plus / Minus Query: 221 agcttcgacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctc 280 ||||| || |||||||| |||| |||||||| ||||| || ||||||||||||| ||| Sbjct: 778 agcttggatctcctcttagccaaactctcactgcggcggtctctctgctccttcaacctg 719 Query: 281 tgtgcaagcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttc 340 ||||| || |||||||||||||| ||||| || || |||||| |||||||||||| Sbjct: 718 gaggcaaggagtttctggtactctgctgcctcagattttgccttggcaatcctcttcttc 659 Query: 341 ttgtcggcaattctggcacgctt 363 || || |||||||| || ||||| Sbjct: 658 ttatcagcaattcttgcccgctt 636
>gb|BT014411.1| Lycopersicon esculentum clone 133718F, mRNA sequence Length = 1067 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 446 ctgcggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagcttc 505 |||||||| ||||||||||| | | ||||||||| |||||| ||| ||||| ||||| Sbjct: 554 ctgcggtaagtgttgacatacttcctgacatcatcttccttggaaagattgaagagcttt 495 Query: 506 ttgatcttcgaagccctcttgggtcccctcatcctgggctt 546 ||||||| |||||||| |||||||| |||||||| ||||| Sbjct: 494 ctgatcttggaagcccttttgggtcctctcatccttggctt 454 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 284 gcaagcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttg 343 ||||| |||||||| || || || ||||||||||| |||||| || |||||||||||| Sbjct: 716 gcaagaagcttctgataatcagctgcctctgacttagccttggcaattctcttcttcttg 657 Query: 344 tcggcaattct 354 || |||||||| Sbjct: 656 tcagcaattct 646
>ref|XM_570222.1| Cryptococcus neoformans var. neoformans JEC21 40s ribosomal protein s6-b (CND02780) partial mRNA Length = 825 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 359 cgcttcctctggagggtcaagggagtcacaagacgctggatcttgggggccttg 412 |||||||||||||| |||||| || ||||||||||||||||||||||||||| Sbjct: 587 cgcttcctctggagacgcaagggggtgacaagacgctggatcttgggggccttg 534
>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75 Length = 196242 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 333 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagac 392 ||||||||||||| |||||||| || | ||||||||| || ||||| || |||||||| | Sbjct: 112399 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaatggggtcacaagcc 112458 Query: 393 gctggatcttgggggccttgct 414 ||||||||| ||||| ||||| Sbjct: 112459 tctggatcttaggggctttgct 112480
>emb|AL031004.1|ATF28M20 Arabidopsis thaliana DNA chromosome 4, BAC clone F28M20 (ESSAII project) Length = 90902 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 333 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagac 392 ||||||||||||| |||||||| || | ||||||||| || ||||| || |||||||| | Sbjct: 40872 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaatggggtcacaagcc 40813 Query: 393 gctggatcttgggggccttgct 414 ||||||||| ||||| ||||| Sbjct: 40812 tctggatcttaggggctttgct 40791
>gb|DQ241846.1| Solanum tuberosum clone 186G09 unknown mRNA Length = 1056 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 449 cggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagcttcttg 508 ||||| ||||||||||| | | ||||||||| |||||| ||| ||||| ||||| || Sbjct: 535 cggtaagtgttgacatacttcctgacatcatcttccttggaaagattgaagagctttctg 476 Query: 509 atcttcgaagccctcttgggtcccctcatcctgggctt 546 ||||| |||||||| |||||||| |||||||| ||||| Sbjct: 475 atcttggaagcccttttgggtcctctcatccttggctt 438 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 284 gcaagcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttg 343 ||||| |||||||| || || || ||||||||||| |||||| || |||||||||||| Sbjct: 700 gcaagaagcttctgataatcagctgcctctgacttagccttggcaattctcttcttcttg 641 Query: 344 tcggcaattct 354 || |||||||| Sbjct: 640 tcagcaattct 630
>ref|XM_654476.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1964.2), mRNA Length = 714 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 379 gggagtcacaagacgctggatcttgggggccttg 412 ||||||||| |||||||||||||||||||||||| Sbjct: 546 gggagtcaccagacgctggatcttgggggccttg 513
>dbj|AK109085.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-H09, full insert sequence Length = 1049 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 265 ctgctccttcagcctctgtgcaagcagcttctggtactctgcagcctctg 314 |||||||||||||||||| | |||||||| ||||||||||| ||||||| Sbjct: 731 ctgctccttcagcctctggacgagcagcttgtggtactctgctgcctctg 682
>gb|AF294917.1|AF294917 Aplysia californica ribosomal protein S6 mRNA, complete cds Length = 760 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 383 gtcacaagacgctggatcttgggggccttgctc 415 ||||| ||||||||||||||||||||||||||| Sbjct: 549 gtcaccagacgctggatcttgggggccttgctc 517
>gb|AF525803.1| Chlamys farreri ribosomal protein S6-like mRNA, partial sequence Length = 554 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 380 ggagtcacaagacgctggatcttgggggcctt 411 ||||||||||| |||||||||||||||||||| Sbjct: 300 ggagtcacaagtcgctggatcttgggggcctt 269
>dbj|AP006076.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT19M07, TM0114, complete sequence Length = 94533 Score = 56.0 bits (28), Expect = 1e-04 Identities = 139/176 (78%) Strand = Plus / Minus Query: 245 ctctcactccggcgatccctctgctccttcagcctctgtgcaagcagcttctggtactct 304 ||||| || ||||| |||||||||||||||| ||| ||||| || |||||||| ||| Sbjct: 19580 ctctcgctacggcgttccctctgctccttcaacctggaggcaagtagtttctggtattct 19521 Query: 305 gcagcctctgacttcttcttggcgatcctcttcttcttgtcggcaattctggcacgcttc 364 || |||||||| || ||||| || ||||||||||| || |||||||| || | |||| Sbjct: 19520 gctgcctctgattttgctttggcaattctcttcttcttatctgcaattcttgccctcttc 19461 Query: 365 ctctggagggtcaagggagtcacaagacgctggatcttgggggccttgctcacctt 420 || || || |||| ||||| || | ||||| ||||| || || ||||||||||| Sbjct: 19460 ctttgaagtgtcagaggagtgaccaatcgctgaatcttaggagctttgctcacctt 19405 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 449 cggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagcttcttg 508 ||||||||||||||||| | | |||||||||||||| || ||||| ||||| | Sbjct: 18918 cggtatgtgttgacatacttcctcacatcatcatccttagacagattgaacagcttgcgg 18859 Query: 509 atcttcgaagccctcttgggtcccctcatcctgggctt 546 || || |||||||||||||| ||||||||||| ||||| Sbjct: 18858 attttagaagccctcttgggacccctcatccttggctt 18821
>ref|XM_751713.1| Ustilago maydis 521 hypothetical protein (UM00659.1) partial mRNA Length = 789 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 383 gtcacaagacgctggatcttgggggccttg 412 ||||||||||||||||||||||| |||||| Sbjct: 611 gtcacaagacgctggatcttgggagccttg 582
>ref|XM_746654.1| Aspergillus fumigatus Af293 40S ribosomal protein S6 (Afu4g10800) partial mRNA Length = 714 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 379 gggagtcacaagacgctggatcttgggggccttg 412 |||||| || |||||||||||||||||||||||| Sbjct: 546 gggagtgaccagacgctggatcttgggggccttg 513
>gb|AC146855.5| Medicago truncatula clone mth2-16c23, complete sequence Length = 137979 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 449 cggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagcttcttg 508 ||||| ||||||||||| | | |||||||||||||||| || ||||| ||||| | Sbjct: 135508 cggtaggtgttgacatacttcctgacatcatcatccttggacagattgaagagcttacgg 135567 Query: 509 atcttcgaagccctcttgggtcccctcatcctgggctt 546 || || ||||||||||| || |||||||| |||||||| Sbjct: 135568 attttggaagccctcttaggacccctcattctgggctt 135605 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 245 ctctcactccggcgatccctctgctccttca 275 |||||||| ||||| |||||||||||||||| Sbjct: 134320 ctctcactgcggcgttccctctgctccttca 134350
>gb|AC149801.3| Medicago truncatula chromosome 2 BAC clone mth2-32i15, complete sequence Length = 96221 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 449 cggtatgtgttgacatagctgcggacatcatcatccttgccaaggttgaaaagcttcttg 508 ||||| ||||||||||| | | |||||||||||||||| || ||||| ||||| | Sbjct: 94045 cggtaggtgttgacatacttcctgacatcatcatccttggacagattgaagagcttacgg 93986 Query: 509 atcttcgaagccctcttgggtcccctcatcctgggctt 546 || || ||||||||||| || |||||||| |||||||| Sbjct: 93985 attttggaagccctcttaggacccctcattctgggctt 93948 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 245 ctctcactccggcgatccctctgctccttca 275 |||||||| ||||| |||||||||||||||| Sbjct: 95233 ctctcactgcggcgttccctctgctccttca 95203
>dbj|AB226198.1| Aspergillus oryzae cDNA, contig sequence: AoEST3057 Length = 1185 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 389 agacgctggatcttgggggccttg 412 |||||||||||||||||||||||| Sbjct: 659 agacgctggatcttgggggccttg 636
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 389 agacgctggatcttgggggccttg 412 |||||||||||||||||||||||| Sbjct: 3098267 agacgctggatcttgggggccttg 3098244
>emb|AJ438987.1|PLI438987 Paracentrotus lividus mRNA for S6 ribosomal protein (rps6 gene) Length = 983 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 389 agacgctggatcttgggggccttg 412 |||||||||||||||||||||||| Sbjct: 564 agacgctggatcttgggggccttg 541
>gb|AY237125.1| Telmatoscopus sp. AMF-2003 ribosomal protein S6 mRNA, partial cds Length = 599 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 466 gctgcggacatcatcatccttgccaaggttgaaaagctt 504 ||||||||||||||| ||||||| |||||||| ||||| Sbjct: 243 gctgcggacatcatcctccttgctcaggttgaacagctt 205
>emb|X68050.1|NTRPS6 N.tabacum mRNA for ribosomal protein S6 Length = 804 Score = 46.1 bits (23), Expect = 0.12 Identities = 86/107 (80%) Strand = Plus / Plus Query: 284 gcaagcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttg 343 ||||| |||||||| || || || ||||| ||||| |||||| || ||||||||||| Sbjct: 300 gcaagaagcttctgatattcagctgcctccgacttagccttggcaattctcttcttctta 359 Query: 344 tcggcaattctggcacgcttcctctggagggtcaagggagtcacaag 390 || |||||||| || | ||| || || || |||||||| |||||||| Sbjct: 360 tcagcaattcttgccctctttctttgaagagtcaagggtgtcacaag 406
>ref|XM_360693.1| Magnaporthe grisea 70-15 hypothetical protein (MG03236.4) partial mRNA Length = 720 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Minus Query: 379 gggagtcacaagacgctggatcttgggggccttg 412 |||||| || || ||||||||||||||||||||| Sbjct: 552 gggagtaaccaggcgctggatcttgggggccttg 519
>ref|XM_867656.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S6 (LOC508350), partial mRNA Length = 709 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 380 ggagtcacaagacgctggatcttggg 405 ||||||||||||||||| |||||||| Sbjct: 464 ggagtcacaagacgctgaatcttggg 439
>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold Length = 1996640 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 4 aagttcatgcaaattttgtccattca 29 |||||||||||||||||||| ||||| Sbjct: 222776 aagttcatgcaaattttgtcaattca 222801
>gb|AC145407.3| Macropus eugenii clone ME_KBa-169G7, complete sequence Length = 129708 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 4 aagttcatgcaaattttgtccattca 29 |||||||||||||||||||| ||||| Sbjct: 88471 aagttcatgcaaattttgtcaattca 88496
>ref|XM_505593.1| Yarrowia lipolytica CLIB122, YALI0F18766g predicted mRNA Length = 729 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 cgctggatcttgggggccttg 412 ||||||||||||||||||||| Sbjct: 533 cgctggatcttgggggccttg 513
>gb|AC092437.4| Homo sapiens BAC clone RP11-326I19 from 4, complete sequence Length = 203583 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 atccctctgctccttcagcctctgt 283 |||||||| |||||||||||||||| Sbjct: 84827 atccctctcctccttcagcctctgt 84851
>gb|AC067728.25| Homo sapiens 3 BAC RP11-117F22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 86751 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 421 ctttcccttcttgttaaggaa 441 ||||||||||||||||||||| Sbjct: 79815 ctttcccttcttgttaaggaa 79835
>dbj|AP000757.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-728F11, complete sequences Length = 184926 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 260 tccctctgctccttcagcctc 280 ||||||||||||||||||||| Sbjct: 21454 tccctctgctccttcagcctc 21474
>dbj|AP001554.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-35P15, complete sequence Length = 171747 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 260 tccctctgctccttcagcctc 280 ||||||||||||||||||||| Sbjct: 130125 tccctctgctccttcagcctc 130145
>gb|AE016830.1| Enterococcus faecalis V583, complete genome Length = 3218031 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 ttttgtccattcagtaacaaa 37 ||||||||||||||||||||| Sbjct: 1268194 ttttgtccattcagtaacaaa 1268174
>emb|CT033435.1| Platynereis dumerilii EST IB0AAA20BE05EM1 Length = 829 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 cgctggatcttgggggccttg 412 ||||||||||||||||||||| Sbjct: 572 cgctggatcttgggggccttg 552
>emb|CT033434.1| Platynereis dumerilii EST IB0AAA20BE05FM1 Length = 830 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 392 cgctggatcttgggggccttg 412 ||||||||||||||||||||| Sbjct: 259 cgctggatcttgggggccttg 279
>emb|CT033340.1| Platynereis dumerilii EST IB0AAA22BC10EM1 Length = 871 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 cgctggatcttgggggccttg 412 ||||||||||||||||||||| Sbjct: 614 cgctggatcttgggggccttg 594
>emb|CT033339.1| Platynereis dumerilii EST IB0AAA22BC10FM1 Length = 837 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 392 cgctggatcttgggggccttg 412 ||||||||||||||||||||| Sbjct: 258 cgctggatcttgggggccttg 278
>emb|CT033115.1| Platynereis dumerilii EST IB0AAA26BH05EM1 Length = 406 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 cgctggatcttgggggccttg 412 ||||||||||||||||||||| Sbjct: 150 cgctggatcttgggggccttg 130
>emb|CT033114.1| Platynereis dumerilii EST IB0AAA26BH05FM1 Length = 406 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 392 cgctggatcttgggggccttg 412 ||||||||||||||||||||| Sbjct: 257 cgctggatcttgggggccttg 277
>emb|CT032815.1| Platynereis dumerilii EST IB0AAA31AB08EM1 Length = 841 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 cgctggatcttgggggccttg 412 ||||||||||||||||||||| Sbjct: 569 cgctggatcttgggggccttg 549
>emb|CT032814.1| Platynereis dumerilii EST IB0AAA31AB08FM1 Length = 818 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 392 cgctggatcttgggggccttg 412 ||||||||||||||||||||| Sbjct: 273 cgctggatcttgggggccttg 293
>emb|CT032774.1| Platynereis dumerilii EST IB0AAA31DB11EM1 Length = 813 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 cgctggatcttgggggccttg 412 ||||||||||||||||||||| Sbjct: 569 cgctggatcttgggggccttg 549
>emb|CT032738.1| Platynereis dumerilii EST IB0AAA32CB08EM1 Length = 796 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 cgctggatcttgggggccttg 412 ||||||||||||||||||||| Sbjct: 522 cgctggatcttgggggccttg 502
>emb|CT032539.1| Platynereis dumerilii EST IB0AAA36DA11EM1 Length = 844 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 cgctggatcttgggggccttg 412 ||||||||||||||||||||| Sbjct: 569 cgctggatcttgggggccttg 549
>emb|CT032538.1| Platynereis dumerilii EST IB0AAA36DA11FM1 Length = 728 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 392 cgctggatcttgggggccttg 412 ||||||||||||||||||||| Sbjct: 276 cgctggatcttgggggccttg 296
>emb|CT032484.1| Platynereis dumerilii EST IB0AAA37CB10EM1 Length = 827 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 cgctggatcttgggggccttg 412 ||||||||||||||||||||| Sbjct: 572 cgctggatcttgggggccttg 552
>emb|CT032483.1| Platynereis dumerilii EST IB0AAA37CB10FM1 Length = 691 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 392 cgctggatcttgggggccttg 412 ||||||||||||||||||||| Sbjct: 256 cgctggatcttgggggccttg 276
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 392 cgctggatcttgggggccttg 412 ||||||||||||||||||||| Sbjct: 2505326 cgctggatcttgggggccttg 2505346
>gb|AC092189.3| Drosophila melanogaster clone BACR34M11, complete sequence Length = 168540 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 cttcttggcgatcctcttct 338 |||||||||||||||||||| Sbjct: 18677 cttcttggcgatcctcttct 18658
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 caccttctttcccttcttgt 434 |||||||||||||||||||| Sbjct: 703729 caccttctttcccttcttgt 703748 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 caccttctttcccttcttgt 434 |||||||||||||||||||| Sbjct: 642024 caccttctttcccttcttgt 642005
>gb|AC158347.4| Mus musculus chromosome 3, clone RP23-380F8, complete sequence Length = 193489 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 tcctctggagggtcaaggga 382 |||||||||||||||||||| Sbjct: 136138 tcctctggagggtcaaggga 136119
>ref|XM_842713.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0783) partial mRNA Length = 1968 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 caccttctttcccttcttgt 434 |||||||||||||||||||| Sbjct: 1056 caccttctttcccttcttgt 1037
>ref|XM_842723.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0793) partial mRNA Length = 1947 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 caccttctttcccttcttgt 434 |||||||||||||||||||| Sbjct: 1056 caccttctttcccttcttgt 1037
>gb|AC126263.4| Mus musculus BAC clone RP23-359P12 from chromosome 8, complete sequence Length = 223991 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 cctcttggccatgctctcac 251 |||||||||||||||||||| Sbjct: 82373 cctcttggccatgctctcac 82354
>ref|XM_775406.1| PREDICTED: Strongylocentrotus purpuratus similar to 40S ribosomal protein S6, transcript variant 1 (LOC577989), mRNA Length = 940 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 389 agacgctggatcttgggggccttg 412 ||||||||||||||||| |||||| Sbjct: 564 agacgctggatcttgggtgccttg 541
>ref|XM_796910.1| PREDICTED: Strongylocentrotus purpuratus similar to 40S ribosomal protein S6, transcript variant 5 (LOC577989), mRNA Length = 916 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 389 agacgctggatcttgggggccttg 412 ||||||||||||||||| |||||| Sbjct: 540 agacgctggatcttgggtgccttg 517
>emb|AJ439463.2|OOS439463 Ostertagia ostertagi mRNA for metalloprotease I (metal I gene) Length = 1772 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 catcatcatccttgccaagg 493 |||||||||||||||||||| Sbjct: 1225 catcatcatccttgccaagg 1206
>emb|AJ419180.1|OOS419180 Ostertagia ostertagi partial mRNA for metalloprotease Length = 1238 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 catcatcatccttgccaagg 493 |||||||||||||||||||| Sbjct: 1150 catcatcatccttgccaagg 1131
>emb|CR938364.1| Single read from an extremity of a full-length cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAA2YB17AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 852 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 389 agacgctggatcttgggggccttg 412 ||||||||||||||||| |||||| Sbjct: 579 agacgctggatcttgggtgccttg 556
>emb|CR938363.1| Single read from an extremity of a full-length cDNA clone made from Aedes aegypti total adult females. 3-prime end of clone KW0AAA2YB17BBM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 805 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 389 agacgctggatcttgggggccttg 412 ||||||||||||||||| |||||| Sbjct: 621 agacgctggatcttgggtgccttg 644
>gb|DQ399013.1| Ictalurus punctatus clone SAE03 hypothetical protein mRNA, partial cds Length = 539 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 aagcagagacagccggagcc 205 |||||||||||||||||||| Sbjct: 89 aagcagagacagccggagcc 108
>gb|AF154067.1|AF154067 Aedes aegypti ribosomal protein S6 mRNA, complete cds Length = 1041 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 389 agacgctggatcttgggggccttg 412 ||||||||||||||||| |||||| Sbjct: 539 agacgctggatcttgggtgccttg 516
>gb|AF154066.1|AF154066 Aedes albopictus ribosomal protein S6 (rpS6) mRNA, complete cds Length = 1050 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 389 agacgctggatcttgggggccttg 412 ||||||||||||||||| |||||| Sbjct: 539 agacgctggatcttgggagccttg 516
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 tcggcaattctggcacgctt 363 |||||||||||||||||||| Sbjct: 4123462 tcggcaattctggcacgctt 4123443
>gb|AC115949.13| Mus musculus chromosome 3, clone RP24-568B16, complete sequence Length = 177771 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 tcctctggagggtcaaggga 382 |||||||||||||||||||| Sbjct: 7942 tcctctggagggtcaaggga 7923
>gb|AY924261.1| Aedes aegypti ribosomal protein S6 gene, partial cds Length = 1476 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 389 agacgctggatcttgggggccttg 412 ||||||||||||||||| |||||| Sbjct: 1087 agacgctggatcttgggtgccttg 1064
>gb|AE003583.3| Drosophila melanogaster chromosome 2L, section 8 of 83 of the complete sequence Length = 303641 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 cttcttggcgatcctcttct 338 |||||||||||||||||||| Sbjct: 202386 cttcttggcgatcctcttct 202367
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 325 ggcgatcctcttcttcttgtcggc 348 ||||||| |||||||||||||||| Sbjct: 3860237 ggcgatcgtcttcttcttgtcggc 3860260
>gb|AC138025.4| Mus musculus BAC clone RP24-430F5 from 8, complete sequence Length = 165737 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 cctcttggccatgctctcac 251 |||||||||||||||||||| Sbjct: 14193 cctcttggccatgctctcac 14212
>gb|AC004369.1|AC004369 Drosophila melanogaster DNA sequence (P1 DS07066 (D70)), complete sequence Length = 77798 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 cttcttggcgatcctcttct 338 |||||||||||||||||||| Sbjct: 64172 cttcttggcgatcctcttct 64191 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,310,539 Number of Sequences: 3902068 Number of extensions: 5310539 Number of successful extensions: 116338 Number of sequences better than 10.0: 106 Number of HSP's better than 10.0 without gapping: 106 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 115896 Number of HSP's gapped (non-prelim): 433 length of query: 546 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 523 effective length of database: 17,143,297,704 effective search space: 8965944699192 effective search space used: 8965944699192 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
