ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart08c08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X91347.1|HVUDPGPP H.vulgare mRNA for UDP-glucose pyrophospho... 182 2e-43
2gb|BT009219.1| Triticum aestivum clone wle1n.pk0063.d7:fis, full... 66 3e-08
3emb|BX465223.9| Zebrafish DNA sequence from clone RP71-8E8 in li... 46 0.026
4emb|BX530071.7| Zebrafish DNA sequence from clone CH211-189P14 i... 46 0.026
5emb|BX248230.21| Zebrafish DNA sequence from clone CH211-213O11 ... 46 0.026
6emb|CR376863.10| Zebrafish DNA sequence from clone DKEY-93F15 in... 42 0.41
7emb|BX530027.11| Zebrafish DNA sequence from clone DKEYP-81G7 in... 40 1.6
8emb|AL162852.14| Human DNA sequence from clone RP11-267I18 on ch... 40 1.6
9emb|BX510326.11| Zebrafish DNA sequence from clone DKEY-19O24 in... 40 1.6
10dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.6
11emb|AL831747.24| Zebrafish DNA sequence from clone CH211-258G4 i... 40 1.6
12dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic D... 40 1.6
13gb|AC145322.2| Oryza sativa (japonica cultivar-group) chromosome... 38 6.4
14gb|AC144822.2| Danio rerio clone CH211-13O4, complete sequence 38 6.4
15emb|CT009620.9| Zebrafish DNA sequence from clone CH73-187F10 in... 38 6.4
16emb|BX901895.15| Zebrafish DNA sequence from clone CH211-218C11 ... 38 6.4
17emb|CR855374.5| Zebrafish DNA sequence from clone CH211-9M16 in ... 38 6.4
18emb|BX537295.7| Zebrafish DNA sequence from clone DKEY-21O10 in ... 38 6.4
19emb|CR354584.8| Zebrafish DNA sequence from clone DKEY-7B6 in li... 38 6.4
20emb|CR931785.6| Zebrafish DNA sequence from clone DKEY-230N5 in ... 38 6.4
21emb|CR376748.8| Zebrafish DNA sequence from clone DKEY-7I1 in li... 38 6.4
22emb|CR759953.10| Zebrafish DNA sequence from clone DKEY-68D15 in... 38 6.4
23emb|CR450737.4| Zebrafish DNA sequence from clone CH211-167D24 i... 38 6.4
24emb|CR847832.18| Zebrafish DNA sequence from clone DKEY-30K23 in... 38 6.4
25emb|CR762392.5| Zebrafish DNA sequence from clone DKEY-265A11 in... 38 6.4
26emb|BX293991.12| Zebrafish DNA sequence from clone CH211-261I24 ... 38 6.4
27emb|BX928746.6| Zebrafish DNA sequence from clone RP71-84D19 in ... 38 6.4
28emb|CR450819.7| Zebrafish DNA sequence from clone DKEY-245G2 in ... 38 6.4
29emb|BX927121.9| Zebrafish DNA sequence from clone CH211-132A5 in... 38 6.4
30emb|BX901893.12| Zebrafish DNA sequence from clone CH211-72G23 i... 38 6.4
31emb|CR855267.20| Zebrafish DNA sequence from clone DKEY-220L13, ... 38 6.4
32emb|BX890570.11| Zebrafish DNA sequence from clone DKEYP-7F1 in ... 38 6.4
33emb|BX548246.17| Zebrafish DNA sequence from clone CH211-274P15 ... 38 6.4
34emb|AL591391.5| Zebrafish DNA sequence from clone BUSM1-186F8 in... 38 6.4
35emb|CR788314.7| Zebrafish DNA sequence from clone DKEY-205J18 in... 38 6.4
36emb|CR589884.15| Zebrafish DNA sequence from clone CH211-206L14 ... 38 6.4
37emb|CR354596.12| Zebrafish DNA sequence from clone CH211-117K14 ... 38 6.4
38emb|BX927244.11| Zebrafish DNA sequence from clone CH211-116O3 i... 38 6.4
39emb|BX469896.14| Zebrafish DNA sequence from clone DKEY-52L6 in ... 38 6.4
40emb|CR352302.9| Zebrafish DNA sequence from clone DKEY-260C5 in ... 38 6.4
41gb|AC158531.2| Mus musculus BAC clone RP23-245H23 from chromosom... 38 6.4
42emb|BX649535.7| Zebrafish DNA sequence from clone DKEY-234E12 in... 38 6.4
43emb|BX511196.11| Zebrafish DNA sequence from clone RP71-14I8 in ... 38 6.4
44emb|BX510645.7| Zebrafish DNA sequence from clone DKEY-5G21 in l... 38 6.4
45gb|AC109448.3| Homo sapiens chromosome 5 clone RP11-141G2, compl... 38 6.4
46gb|AC108096.2| Homo sapiens chromosome 5 clone RP11-107O20, comp... 38 6.4
47gb|AC092276.2| Homo sapiens chromosome 5 clone CTD-2010P7, compl... 38 6.4
48gb|DP000002.1| Sminthopsis macroura target 1 genomic scaffold 38 6.4
49emb|BX663605.6| Zebrafish DNA sequence from clone DKEY-14I19 in ... 38 6.4
50emb|BX571973.15| Zebrafish DNA sequence from clone DKEY-254A11 i... 38 6.4
51emb|BX465211.8| Zebrafish DNA sequence from clone CH211-142D23 i... 38 6.4
52gb|AC123967.3| Sminthopsis macroura clone 102C13, complete sequence 38 6.4
53gb|AC025656.7| Homo sapiens chromosome 18, clone RP11-36L19, com... 38 6.4
54emb|BX677668.10| Zebrafish DNA sequence from clone CH211-141E20 ... 38 6.4
55emb|BX255889.7| Zebrafish DNA sequence from clone CH211-270O7 in... 38 6.4
56dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 38 6.4
57emb|BX322555.7| Zebrafish DNA sequence from clone DKEY-19D21 in ... 38 6.4
58gb|AC091301.3| Danio rerio clone 1K20, complete sequence 38 6.4
59emb|BX294175.5| Zebrafish DNA sequence from clone DKEY-281I8 in ... 38 6.4
60emb|BX276187.8| Zebrafish DNA sequence from clone DKEY-207F13 in... 38 6.4
61emb|AL844887.10| Zebrafish DNA sequence from clone DKEY-66C10, c... 38 6.4
62emb|BX284684.8| Zebrafish DNA sequence from clone DKEY-14I10 in ... 38 6.4
63emb|BX120008.9| Zebrafish DNA sequence from clone CH211-215G18 i... 38 6.4
64emb|CR786562.6| Zebrafish DNA sequence from clone CH211-244H7 in... 38 6.4
65emb|BX649576.15| Zebrafish DNA sequence from clone CH211-153M5 i... 38 6.4
66emb|BX890602.8| Zebrafish DNA sequence from clone DKEYP-109H9 in... 38 6.4
67emb|BX927076.9| Zebrafish DNA sequence from clone CH211-241L24 i... 38 6.4
68emb|AL928866.7| Zebrafish DNA sequence from clone DKEY-11E23 in ... 38 6.4
69emb|AL596203.6| Zebrafish DNA sequence from clone BUSM1-94E17 in... 38 6.4
70emb|AL591482.3| Zebrafish DNA sequence from clone BUSM1-116C14 i... 38 6.4
71emb|AL669882.1| Zebrafish DNA sequence from clone BUSM1-37M10 in... 38 6.4
72emb|CR391965.8| Zebrafish DNA sequence from clone CH211-124O16 i... 38 6.4
73emb|CR388417.12| Zebrafish DNA sequence from clone DKEY-211M6 in... 38 6.4
74gb|AC006221.1|AC006221 Homo sapiens chromosome 18, clone hRPK.14... 38 6.4
75emb|BX957271.6| Zebrafish DNA sequence from clone CH211-130N22 i... 38 6.4
76emb|AL845435.19| Zebrafish DNA sequence from clone CH211-176G13 ... 38 6.4
77emb|AL929522.11| Zebrafish DNA sequence from clone CH211-157B19 ... 38 6.4
78emb|CR376732.12| Zebrafish DNA sequence from clone DKEY-146H23 i... 38 6.4
79gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 38 6.4
80emb|AL591418.11| Zebrafish DNA sequence from clone BUSM1-139E19 ... 38 6.4
81emb|AL591180.4| Zebrafish DNA sequence from clone BUSM1-243A08 i... 38 6.4
82emb|AL953877.5| Zebrafish DNA sequence from clone CH211-188M3, c... 38 6.4
83emb|AL772250.12| Zebrafish DNA sequence from clone CH211-160M22,... 38 6.4
84emb|AL845513.9| Zebrafish DNA sequence from clone CH211-13O4 in ... 38 6.4
85emb|AL929039.7| Zebrafish DNA sequence from clone DKEY-245I6, co... 38 6.4 
>emb|X91347.1|HVUDPGPP H.vulgare mRNA for UDP-glucose pyrophosphorylase
          Length = 1783

 Score =  182 bits (92), Expect = 2e-43
 Identities = 115/125 (92%)
 Strand = Plus / Minus

                                                                        
Query: 8    gaaaactatggcatcatcatatcatataacccnnnnnnnttttacgtccctggcactccc 67
            |||||||||||||||||||||||||||||||        |||||||||||||||||||||
Sbjct: 1775 gaaaactatggcatcatcatatcatataaccaaaagaaattttacgtccctggcactccc 1716

                                                                        
Query: 68   aggaaaaacggaagtgtcaatggaccgcacggaggggattacagttattatgtaacaggg 127
            ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1715 aggaagaacggaagtgtcaatggaccgcacggaggggattacagttattatgtaacgggg 1656

                 
Query: 128  ctccc 132
            |||||
Sbjct: 1655 ctccc 1651
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>gb|BT009219.1| Triticum aestivum clone wle1n.pk0063.d7:fis, full insert mRNA
            sequence
          Length = 1814

 Score = 65.9 bits (33), Expect = 3e-08
 Identities = 66/76 (86%), Gaps = 2/76 (2%)
 Strand = Plus / Minus

                                                                        
Query: 47   ttttacgtccctggcactcccaggaaaaacggaagtgtcaatggaccgcacggaggggat 106
            ||||||||||||||||| |||||||| |||  ||||||  ||| || |||| ||||||||
Sbjct: 1720 ttttacgtccctggcacgcccaggaagaac--aagtgtagatgaacagcacagaggggat 1663

                            
Query: 107  tacagttattatgtaa 122
            |||| |||||||||||
Sbjct: 1662 tacaattattatgtaa 1647
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>emb|BX465223.9| Zebrafish DNA sequence from clone RP71-8E8 in linkage group 11,
             complete sequence
          Length = 183229

 Score = 46.1 bits (23), Expect = 0.026
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             |||||||||||||||||||||||
Sbjct: 87810 actcccaggaaaaacggaagtgt 87832
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>emb|BX530071.7| Zebrafish DNA sequence from clone CH211-189P14 in linkage group 10,
             complete sequence
          Length = 148539

 Score = 46.1 bits (23), Expect = 0.026
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             |||||||||||||||||||||||
Sbjct: 84518 actcccaggaaaaacggaagtgt 84540
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>emb|BX248230.21| Zebrafish DNA sequence from clone CH211-213O11 in linkage group 11,
              complete sequence
          Length = 217432

 Score = 46.1 bits (23), Expect = 0.026
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 62     actcccaggaaaaacggaagtgt 84
              |||||||||||||||||||||||
Sbjct: 206442 actcccaggaaaaacggaagtgt 206464
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>emb|CR376863.10| Zebrafish DNA sequence from clone DKEY-93F15 in linkage group 5,
             complete sequence
          Length = 183007

 Score = 42.1 bits (21), Expect = 0.41
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 64    tcccaggaaaaacggaagtgt 84
             |||||||||||||||||||||
Sbjct: 61831 tcccaggaaaaacggaagtgt 61851
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>emb|BX530027.11| Zebrafish DNA sequence from clone DKEYP-81G7 in linkage group 2,
             complete sequence
          Length = 181078

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 62    actcccaggaaaaacggaagtgtc 85
             ||||||| ||||||||||||||||
Sbjct: 94475 actcccatgaaaaacggaagtgtc 94452
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>emb|AL162852.14| Human DNA sequence from clone RP11-267I18 on chromosome 13 Contains a
             novel gene, complete sequence
          Length = 110166

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   gttattatgtaacagggctc 130
             ||||||||||||||||||||
Sbjct: 97072 gttattatgtaacagggctc 97091
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>emb|BX510326.11| Zebrafish DNA sequence from clone DKEY-19O24 in linkage group 24,
              complete sequence
          Length = 239398

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 62     actcccaggaaaaacggaagtgtc 85
              ||||||||||||||||| ||||||
Sbjct: 190678 actcccaggaaaaacgggagtgtc 190655
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 16      tggcatcatcatatcatata 35
               ||||||||||||||||||||
Sbjct: 3257780 tggcatcatcatatcatata 3257799
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>emb|AL831747.24| Zebrafish DNA sequence from clone CH211-258G4 in linkage group 9,
             complete sequence
          Length = 156348

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 62    actcccaggaaaaacggaagtgtc 85
             ||||||||||||||| ||||||||
Sbjct: 88796 actcccaggaaaaacagaagtgtc 88819
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>dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0438H08
          Length = 148626

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    tggcatcatcatatcatata 35
             ||||||||||||||||||||
Sbjct: 35347 tggcatcatcatatcatata 35366
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>gb|AC145322.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0096N19, complete sequence
          Length = 178671

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 18    gcatcatcatatcatataa 36
             |||||||||||||||||||
Sbjct: 90277 gcatcatcatatcatataa 90259
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>gb|AC144822.2| Danio rerio clone CH211-13O4, complete sequence
          Length = 164460

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 62   actcccaggaaaaacggaagtgt 84
            ||||||||||||||||| |||||
Sbjct: 4119 actcccaggaaaaacgggagtgt 4097
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>emb|CT009620.9| Zebrafish DNA sequence from clone CH73-187F10 in linkage group 6,
             complete sequence
          Length = 95528

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||||||||||||| |||||
Sbjct: 50745 actcccaggaaaaacgggagtgt 50723
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>emb|BX901895.15| Zebrafish DNA sequence from clone CH211-218C11 in linkage group 7,
              complete sequence
          Length = 208436

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 62     actcccaggaaaaacggaagtgt 84
              ||||||| |||||||||||||||
Sbjct: 172487 actcccatgaaaaacggaagtgt 172509
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>emb|CR855374.5| Zebrafish DNA sequence from clone CH211-9M16 in linkage group 16,
             complete sequence
          Length = 78429

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||||||||||||| |||||
Sbjct: 19116 actcccaggaaaaacgggagtgt 19094
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>emb|BX537295.7| Zebrafish DNA sequence from clone DKEY-21O10 in linkage group 1, complete
              sequence
          Length = 165366

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 62     actcccaggaaaaacggaagtgt 84
              ||||||||||||||||| |||||
Sbjct: 114248 actcccaggaaaaacgggagtgt 114270
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>emb|CR354584.8| Zebrafish DNA sequence from clone DKEY-7B6 in linkage group 12,
             complete sequence
          Length = 218091

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 61    cactcccaggaaaaacggaagtg 83
             |||||||| ||||||||||||||
Sbjct: 37673 cactcccatgaaaaacggaagtg 37651
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>emb|CR931785.6| Zebrafish DNA sequence from clone DKEY-230N5 in linkage group 7, complete
              sequence
          Length = 196531

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 62     actcccaggaaaaacggaagtgt 84
              ||||||| |||||||||||||||
Sbjct: 191237 actcccatgaaaaacggaagtgt 191259
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>emb|CR376748.8| Zebrafish DNA sequence from clone DKEY-7I1 in linkage group 23, complete
              sequence
          Length = 233351

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 62     actcccaggaaaaacggaagtgt 84
              ||||||||||||||| |||||||
Sbjct: 114239 actcccaggaaaaactgaagtgt 114261
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>emb|CR759953.10| Zebrafish DNA sequence from clone DKEY-68D15 in linkage group 7, complete
              sequence
          Length = 162332

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 62     actcccaggaaaaacggaagtgt 84
              ||||||||||||||| |||||||
Sbjct: 100347 actcccaggaaaaacagaagtgt 100325
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>emb|CR450737.4| Zebrafish DNA sequence from clone CH211-167D24 in linkage group 12,
              complete sequence
          Length = 156532

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 61     cactcccaggaaaaacggaagtg 83
              |||||||| ||||||||||||||
Sbjct: 142926 cactcccatgaaaaacggaagtg 142948
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>emb|CR847832.18| Zebrafish DNA sequence from clone DKEY-30K23 in linkage group 8,
             complete sequence
          Length = 135277

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||||||||||| |||||||
Sbjct: 22790 actcccaggaaaaacagaagtgt 22768
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>emb|CR762392.5| Zebrafish DNA sequence from clone DKEY-265A11 in linkage group 8,
              complete sequence
          Length = 203490

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 62     actcccaggaaaaacggaagtgt 84
              ||||||||||||||||| |||||
Sbjct: 188526 actcccaggaaaaacgggagtgt 188504
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>emb|BX293991.12| Zebrafish DNA sequence from clone CH211-261I24 in linkage group 11,
             complete sequence
          Length = 198825

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||| |||||||||||||||
Sbjct: 83316 actcccatgaaaaacggaagtgt 83338
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>emb|BX928746.6| Zebrafish DNA sequence from clone RP71-84D19 in linkage group 9,
             complete sequence
          Length = 93292

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 62    actcccaggaaaaacggaa 80
             |||||||||||||||||||
Sbjct: 56071 actcccaggaaaaacggaa 56089
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>emb|CR450819.7| Zebrafish DNA sequence from clone DKEY-245G2 in linkage group 8, complete
              sequence
          Length = 168244

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 62     actcccaggaaaaacggaagtgt 84
              ||||||| |||||||||||||||
Sbjct: 133189 actcccatgaaaaacggaagtgt 133211
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>emb|BX927121.9| Zebrafish DNA sequence from clone CH211-132A5 in linkage group 2,
              complete sequence
          Length = 177223

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 62     actcccaggaaaaacggaagtgt 84
              ||||||||||||||||| |||||
Sbjct: 115595 actcccaggaaaaacgggagtgt 115617
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>emb|BX901893.12| Zebrafish DNA sequence from clone CH211-72G23 in linkage group 1,
             complete sequence
          Length = 103132

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||| |||||||||||||||
Sbjct: 88571 actcccatgaaaaacggaagtgt 88593
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>emb|CR855267.20| Zebrafish DNA sequence from clone DKEY-220L13, complete sequence
          Length = 142801

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||||||||||||| |||||
Sbjct: 16810 actcccaggaaaaacgggagtgt 16788
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>emb|BX890570.11| Zebrafish DNA sequence from clone DKEYP-7F1 in linkage group 25,
             complete sequence
          Length = 170260

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||||||||||| |||||||
Sbjct: 66017 actcccaggaaaaacagaagtgt 65995
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>emb|BX548246.17| Zebrafish DNA sequence from clone CH211-274P15 in linkage group 14,
             complete sequence
          Length = 155919

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 62    actcccaggaaaaacggaa 80
             |||||||||||||||||||
Sbjct: 37169 actcccaggaaaaacggaa 37187
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>emb|AL591391.5| Zebrafish DNA sequence from clone BUSM1-186F8 in linkage group 7
             Contains the nitr1a_3 gene for novel immune-type receptor
             1a, allele 3, the nitr1c_3 gene for novel immune-type
             receptor 1c, allele 3, the nitr2e_1 gene for novel
             immune-type receptor 2e, allele 1, the nitr1b_2 gene for
             novel immune-ype receptor 1b, allele 2, the nitr2a_3 gene
             for novel immune-type receptor 2a, allele 3, the nitr2b_1
             gene for novel immune-type receptor 2b, allele 1, the
             nitr1f_1 gene for novel immune-type receptor 1f, allele 1,
             a novel immune-type receptor 2c pseudogene, the nitr3d_3
             gene for novel immune-type receptor 3d, allele 3, the
             nitr1h_1 gene for novel immune-type receptor 1h, allele 1,
             the nitr1d_5 gene for novel immune-type receptor 1d,
             allele 5 and two novel immune-type receptor 1 pseudogenes,
             complete sequence
          Length = 97640

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||| |||||||||||||||
Sbjct: 19907 actcccatgaaaaacggaagtgt 19929
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>emb|CR788314.7| Zebrafish DNA sequence from clone DKEY-205J18 in linkage group 8,
              complete sequence
          Length = 164950

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 62     actcccaggaaaaacggaagtgt 84
              ||||||| |||||||||||||||
Sbjct: 109961 actcccatgaaaaacggaagtgt 109983
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>emb|CR589884.15| Zebrafish DNA sequence from clone CH211-206L14 in linkage group 13,
              complete sequence
          Length = 151480

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 62     actcccaggaaaaacggaagtgt 84
              ||||| |||||||||||||||||
Sbjct: 111648 actcctaggaaaaacggaagtgt 111670
to top
>emb|CR354596.12| Zebrafish DNA sequence from clone CH211-117K14 in linkage group 23,
              complete sequence
          Length = 172749

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 62     actcccaggaaaaacggaagtgt 84
              ||||||||||||||||| |||||
Sbjct: 133752 actcccaggaaaaacgggagtgt 133730
to top
>emb|BX927244.11| Zebrafish DNA sequence from clone CH211-116O3 in linkage group 15,
              complete sequence
          Length = 152919

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 62     actcccaggaaaaacggaagtgt 84
              ||||||||||||||||| |||||
Sbjct: 133052 actcccaggaaaaacgggagtgt 133074
to top
>emb|BX469896.14| Zebrafish DNA sequence from clone DKEY-52L6 in linkage group 12,
             complete sequence
          Length = 157056

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||||||||||||| |||||
Sbjct: 38946 actcccaggaaaaacgggagtgt 38968
to top
>emb|CR352302.9| Zebrafish DNA sequence from clone DKEY-260C5 in linkage group 19,
            complete sequence
          Length = 146664

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 62   actcccaggaaaaacggaagtgt 84
            ||||||| |||||||||||||||
Sbjct: 9686 actcccatgaaaaacggaagtgt 9708
to top
>gb|AC158531.2| Mus musculus BAC clone RP23-245H23 from chromosome 14, complete
             sequence
          Length = 175848

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 107   tacagttattatgtaacag 125
             |||||||||||||||||||
Sbjct: 40707 tacagttattatgtaacag 40725
to top
>emb|BX649535.7| Zebrafish DNA sequence from clone DKEY-234E12 in linkage group 3,
              complete sequence
          Length = 151079

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 62     actcccaggaaaaacggaagtgt 84
              ||||||||||||||||| |||||
Sbjct: 129251 actcccaggaaaaacgggagtgt 129273
to top
>emb|BX511196.11| Zebrafish DNA sequence from clone RP71-14I8 in linkage group 5,
             complete sequence
          Length = 143654

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||||||||||||| |||||
Sbjct: 12736 actcccaggaaaaacgggagtgt 12758
to top
>emb|BX510645.7| Zebrafish DNA sequence from clone DKEY-5G21 in linkage group 14,
             complete sequence
          Length = 218603

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||| |||||||||||||||
Sbjct: 74173 actcccatgaaaaacggaagtgt 74151
to top
>gb|AC109448.3| Homo sapiens chromosome 5 clone RP11-141G2, complete sequence
          Length = 163817

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 58     tggcactcccaggaaaaacggaagtgt 84
              |||||||||||||||||| | ||||||
Sbjct: 144700 tggcactcccaggaaaaaagaaagtgt 144726
to top
>gb|AC108096.2| Homo sapiens chromosome 5 clone RP11-107O20, complete sequence
          Length = 160808

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 58    tggcactcccaggaaaaacggaagtgt 84
             |||||||||||||||||| | ||||||
Sbjct: 52817 tggcactcccaggaaaaaagaaagtgt 52843
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>gb|AC092276.2| Homo sapiens chromosome 5 clone CTD-2010P7, complete sequence
          Length = 84404

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 58    tggcactcccaggaaaaacggaagtgt 84
             |||||||||||||||||| | ||||||
Sbjct: 53359 tggcactcccaggaaaaaagaaagtgt 53385
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>gb|DP000002.1| Sminthopsis macroura target 1 genomic scaffold
          Length = 305394

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 18    gcatcatcatatcatataa 36
             |||||||||||||||||||
Sbjct: 13281 gcatcatcatatcatataa 13299
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>emb|BX663605.6| Zebrafish DNA sequence from clone DKEY-14I19 in linkage group 7, complete
              sequence
          Length = 170764

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 62     actcccaggaaaaacggaagtgt 84
              ||||||||||||||| |||||||
Sbjct: 105158 actcccaggaaaaacagaagtgt 105136
to top
>emb|BX571973.15| Zebrafish DNA sequence from clone DKEY-254A11 in linkage group 22,
              complete sequence
          Length = 214325

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 62     actcccaggaaaaacggaagtgt 84
              ||||||||||||||||| |||||
Sbjct: 132782 actcccaggaaaaacgggagtgt 132760
to top
>emb|BX465211.8| Zebrafish DNA sequence from clone CH211-142D23 in linkage group 17,
             complete sequence
          Length = 173690

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             |||||||||||||||| ||||||
Sbjct: 98940 actcccaggaaaaacgtaagtgt 98962
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>gb|AC123967.3| Sminthopsis macroura clone 102C13, complete sequence
          Length = 59818

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 18    gcatcatcatatcatataa 36
             |||||||||||||||||||
Sbjct: 13281 gcatcatcatatcatataa 13299
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>gb|AC025656.7| Homo sapiens chromosome 18, clone RP11-36L19, complete sequence
          Length = 193351

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 19     catcatcatatcatataac 37
              |||||||||||||||||||
Sbjct: 104182 catcatcatatcatataac 104200
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>emb|BX677668.10| Zebrafish DNA sequence from clone CH211-141E20 in linkage group 1,
              complete sequence
          Length = 182809

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 62     actcccaggaaaaacggaagtgt 84
              |||||||| ||||||||||||||
Sbjct: 149160 actcccagaaaaaacggaagtgt 149182
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>emb|BX255889.7| Zebrafish DNA sequence from clone CH211-270O7 in linkage group 17,
              complete sequence
          Length = 162918

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 62     actcccaggaaaaacggaagtgt 84
              ||||||||||||||| |||||||
Sbjct: 110022 actcccaggaaaaacagaagtgt 110000
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 18      gcatcatcatatcatataa 36
               |||||||||||||||||||
Sbjct: 4741397 gcatcatcatatcatataa 4741415
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>emb|BX322555.7| Zebrafish DNA sequence from clone DKEY-19D21 in linkage group 15,
              complete sequence
          Length = 209310

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 62     actcccaggaaaaacggaagtgt 84
              ||||||||||||||||| |||||
Sbjct: 151087 actcccaggaaaaacggtagtgt 151109
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>gb|AC091301.3| Danio rerio clone 1K20, complete sequence
          Length = 48082

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||| |||||||||||||||
Sbjct: 30579 actcccatgaaaaacggaagtgt 30557
to top
>emb|BX294175.5| Zebrafish DNA sequence from clone DKEY-281I8 in linkage group 1,
             complete sequence
          Length = 165355

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             |||||||| ||||||||||||||
Sbjct: 42626 actcccagaaaaaacggaagtgt 42648
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>emb|BX276187.8| Zebrafish DNA sequence from clone DKEY-207F13 in linkage group 8,
             complete sequence
          Length = 159887

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||| |||||||||||||||
Sbjct: 58337 actcccatgaaaaacggaagtgt 58359
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>emb|AL844887.10| Zebrafish DNA sequence from clone DKEY-66C10, complete sequence
          Length = 243870

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 62     actcccaggaaaaacggaagtgt 84
              ||||||||||||||||| |||||
Sbjct: 138998 actcccaggaaaaacgggagtgt 138976
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>emb|BX284684.8| Zebrafish DNA sequence from clone DKEY-14I10 in linkage group 8,
             complete sequence
          Length = 163766

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||| |||||||||||||||
Sbjct: 63905 actcccatgaaaaacggaagtgt 63927
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>emb|BX120008.9| Zebrafish DNA sequence from clone CH211-215G18 in linkage group 14,
             complete sequence
          Length = 221928

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||||||||||||| |||||
Sbjct: 62060 actcccaggaaaaacgggagtgt 62038
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>emb|CR786562.6| Zebrafish DNA sequence from clone CH211-244H7 in linkage group 18,
             complete sequence
          Length = 144824

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||||||||||||| |||||
Sbjct: 60911 actcccaggaaaaacgggagtgt 60933
to top
>emb|BX649576.15| Zebrafish DNA sequence from clone CH211-153M5 in linkage group 18,
             complete sequence
          Length = 108124

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||||||||||||| |||||
Sbjct: 94750 actcccaggaaaaacgggagtgt 94728
to top
>emb|BX890602.8| Zebrafish DNA sequence from clone DKEYP-109H9 in linkage group 18,
              complete sequence
          Length = 191296

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 62     actcccaggaaaaacggaagtgt 84
              ||||||||||||||||| |||||
Sbjct: 153151 actcccaggaaaaacgggagtgt 153129
to top
>emb|BX927076.9| Zebrafish DNA sequence from clone CH211-241L24 in linkage group 18,
             complete sequence
          Length = 152951

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||||||||||||| |||||
Sbjct: 83366 actcccaggaaaaacgggagtgt 83344
to top
>emb|AL928866.7| Zebrafish DNA sequence from clone DKEY-11E23 in linkage group 20,
              complete sequence
          Length = 249759

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 62     actcccaggaaaaacggaagtgt 84
              ||||||| |||||||||||||||
Sbjct: 132056 actcccatgaaaaacggaagtgt 132078
to top
>emb|AL596203.6| Zebrafish DNA sequence from clone BUSM1-94E17 in linkage group 3,
             complete sequence
          Length = 104106

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||| |||||||||||||||
Sbjct: 44697 actcccatgaaaaacggaagtgt 44675
to top
>emb|AL591482.3| Zebrafish DNA sequence from clone BUSM1-116C14 in linkage group 7,
             complete sequence
          Length = 95364

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||| |||||||||||||||
Sbjct: 23651 actcccatgaaaaacggaagtgt 23673
to top
>emb|AL669882.1| Zebrafish DNA sequence from clone BUSM1-37M10 in linkage group 3,
             complete sequence
          Length = 25694

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||| |||||||||||||||
Sbjct: 20100 actcccatgaaaaacggaagtgt 20122
to top
>emb|CR391965.8| Zebrafish DNA sequence from clone CH211-124O16 in linkage group 24,
             complete sequence
          Length = 157418

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||| |||||||||||||||
Sbjct: 54415 actcccatgaaaaacggaagtgt 54393
to top
>emb|CR388417.12| Zebrafish DNA sequence from clone DKEY-211M6 in linkage group 24,
             complete sequence
          Length = 111236

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||||||||||||| |||||
Sbjct: 99139 actcccaggaaaaacgggagtgt 99161
to top
>gb|AC006221.1|AC006221 Homo sapiens chromosome 18, clone hRPK.142_O_10, complete sequence
          Length = 79085

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 19    catcatcatatcatataac 37
             |||||||||||||||||||
Sbjct: 76940 catcatcatatcatataac 76958
to top
>emb|BX957271.6| Zebrafish DNA sequence from clone CH211-130N22 in linkage group 10,
              complete sequence
          Length = 161165

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 62     actcccaggaaaaacggaagtgt 84
              ||||||| |||||||||||||||
Sbjct: 142145 actcccatgaaaaacggaagtgt 142123
to top
>emb|AL845435.19| Zebrafish DNA sequence from clone CH211-176G13 in linkage group 10,
             complete sequence
          Length = 141424

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||| |||||||||||||||
Sbjct: 64808 actcccatgaaaaacggaagtgt 64830
to top
>emb|AL929522.11| Zebrafish DNA sequence from clone CH211-157B19 in linkage group 23,
             complete sequence
          Length = 165119

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||||||||||||| |||||
Sbjct: 91101 actcccaggaaaaacgggagtgt 91123
to top
>emb|CR376732.12| Zebrafish DNA sequence from clone DKEY-146H23 in linkage group 3,
             complete sequence
          Length = 171210

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||| |||||||||||||||
Sbjct: 47083 actcccatgaaaaacggaagtgt 47061
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 18      gcatcatcatatcatataa 36
               |||||||||||||||||||
Sbjct: 4760181 gcatcatcatatcatataa 4760199
to top
>emb|AL591418.11| Zebrafish DNA sequence from clone BUSM1-139E19 in linkage group 7,
             complete sequence
          Length = 112025

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||| |||||||||||||||
Sbjct: 23248 actcccatgaaaaacggaagtgt 23270
to top
>emb|AL591180.4| Zebrafish DNA sequence from clone BUSM1-243A08 in linkage group 8
             Contains a novel and partly predicted gene for a protein
             similar to major histocompatibility complex class II DCB
             gene (mhc2dcb), MHC2DBC related sequence (mhc2dbc-rs),
             part of a novel gene for a protein similar to MHC class II
             alpha chain, the fzd10 gene for frizzled homologue 10 and
             a GpC island, complete sequence
          Length = 80272

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||| |||||||||||||||
Sbjct: 80093 actcccatgaaaaacggaagtgt 80071
to top
>emb|AL953877.5| Zebrafish DNA sequence from clone CH211-188M3, complete sequence
          Length = 152080

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 62    actcccaggaaaaacggaa 80
             |||||||||||||||||||
Sbjct: 89314 actcccaggaaaaacggaa 89296
to top
>emb|AL772250.12| Zebrafish DNA sequence from clone CH211-160M22, complete sequence
          Length = 159758

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 62     actcccaggaaaaacggaagtgt 84
              ||||||||||||||||| |||||
Sbjct: 156698 actcccaggaaaaacgggagtgt 156676



 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 62     actcccaggaaaaacggaagtgt 84
              ||||||||||||||||| |||||
Sbjct: 155919 actcccaggaaaaacgggagtgt 155897



 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 62     actcccaggaaaaacggaagtgt 84
              ||||||||||||||||| |||||
Sbjct: 155141 actcccaggaaaaacgggagtgt 155119
to top
>emb|AL845513.9| Zebrafish DNA sequence from clone CH211-13O4 in linkage group 16,
              complete sequence
          Length = 164117

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 62     actcccaggaaaaacggaagtgt 84
              ||||||||||||||||| |||||
Sbjct: 160011 actcccaggaaaaacgggagtgt 160033
to top
>emb|AL929039.7| Zebrafish DNA sequence from clone DKEY-245I6, complete sequence
          Length = 162385

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 62    actcccaggaaaaacggaagtgt 84
             ||||||||||||||||| |||||
Sbjct: 78737 actcccaggaaaaacgggagtgt 78759


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 877,217
Number of Sequences: 3902068
Number of extensions: 877217
Number of successful extensions: 58039
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57834
Number of HSP's gapped (non-prelim): 204
length of query: 135
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 114
effective length of database: 17,151,101,840
effective search space: 1955225609760
effective search space used: 1955225609760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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