Clone Name | rbart08c07 |
---|---|
Clone Library Name | barley_pub |
>KPCI_PONPY (Q5R4K9) Protein kinase C iota type (EC 2.7.11.13) (nPKC-iota)| Length = 587 Score = 30.4 bits (67), Expect = 2.9 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%) Frame = -3 Query: 401 KECHPTIAEELGKHFANCELRPMVLVDRSNLGSDSS----TYNFAGKIPAGLDMPSDVAD 234 K+CH + E G+H E PM+ +D+S++ SD + YN P+ + V + Sbjct: 171 KKCHKLVTIECGRHSLPPE--PMMPMDQSSMHSDHAQTVIPYN-----PSSHESLDQVGE 223 Query: 233 EKHAEEASKN*RPSST 186 EK A ++ + SS+ Sbjct: 224 EKEAMNTRESGKASSS 239
>STAT_ANOGA (Q7QDU4) Signal transducer and transcription activator (Ag-STAT)| Length = 722 Score = 29.3 bits (64), Expect = 6.4 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Frame = -3 Query: 431 FLYHTL---NMYGKECHPTIAEELGKHFANCELRPMVLVDRSNLGSDSSTYN 285 +LY T+ +G+ P I + KH+ + E+R +++ S+ S SST N Sbjct: 626 YLYPTIPKQEAFGRYTAPAIQKPRSKHYISAEMRTVLIFAPSSNQSSSSTPN 677
>RL25_LEGPL (Q5WTE8) 50S ribosomal protein L25 (General stress protein CTC)| Length = 219 Score = 28.9 bits (63), Expect = 8.3 Identities = 19/80 (23%), Positives = 31/80 (38%) Frame = -3 Query: 464 EKEIAIVSHSGFLYHTLNMYGKECHPTIAEELGKHFANCELRPMVLVDRSNLGSDSSTYN 285 E++ + G + HT+ C +L + VD S +G D + Sbjct: 114 EEQSPGIKAGGIVQHTMTQVEIRCQAK------------DLPEFIEVDMSKVGMDDVVHL 161 Query: 284 FAGKIPAGLDMPSDVADEKH 225 K+P G+ + DVAD H Sbjct: 162 SDLKLPKGVQLTVDVADGSH 181
>RL25_LEGPH (Q5ZS67) 50S ribosomal protein L25 (General stress protein CTC)| Length = 219 Score = 28.9 bits (63), Expect = 8.3 Identities = 19/80 (23%), Positives = 31/80 (38%) Frame = -3 Query: 464 EKEIAIVSHSGFLYHTLNMYGKECHPTIAEELGKHFANCELRPMVLVDRSNLGSDSSTYN 285 E++ + G + HT+ C +L + VD S +G D + Sbjct: 114 EEQSPGIKAGGIVQHTMTQVEIRCQAK------------DLPEFIEVDMSKVGMDDVVHL 161 Query: 284 FAGKIPAGLDMPSDVADEKH 225 K+P G+ + DVAD H Sbjct: 162 SDLKLPKGVQLTVDVADGSH 181
>RL25_LEGPA (Q5X1N8) 50S ribosomal protein L25 (General stress protein CTC)| Length = 219 Score = 28.9 bits (63), Expect = 8.3 Identities = 19/80 (23%), Positives = 31/80 (38%) Frame = -3 Query: 464 EKEIAIVSHSGFLYHTLNMYGKECHPTIAEELGKHFANCELRPMVLVDRSNLGSDSSTYN 285 E++ + G + HT+ C +L + VD S +G D + Sbjct: 114 EEQSPGIKAGGIVQHTMTQVEIRCQAK------------DLPEFIEVDMSKVGMDDVVHL 161 Query: 284 FAGKIPAGLDMPSDVADEKH 225 K+P G+ + DVAD H Sbjct: 162 SDLKLPKGVQLTVDVADGSH 181
>ANR21_HUMAN (Q86YR6) Ankyrin repeat domain-containing protein 21 (Protein POTE)| (Prostate, ovary, testis expressed protein) Length = 584 Score = 28.9 bits (63), Expect = 8.3 Identities = 20/94 (21%), Positives = 41/94 (43%), Gaps = 2/94 (2%) Frame = -3 Query: 401 KECHPTIAEELGKHFANCELRPMVLVDRSNLGS--DSSTYNFAGKIPAGLDMPSDVADEK 228 K+C + EE+ KH +N P L + ++ G+ D + P P +E Sbjct: 409 KDCDREVEEEIKKHGSNPVGLPENLTNGASAGNGDDGLIPQRRSRKPENQQFPDTENEEY 468 Query: 227 HAEEASKN*RPSSTRMSLILYQTPVLADNELRID 126 H++E + + S + + Q +L + + +I+ Sbjct: 469 HSDEQNDTRKQLSEEQNTGISQDEILTNKQKQIE 502
>POT15_HUMAN (Q6S5H4) Prostate, ovary, testis expressed protein on chromosome 15| Length = 581 Score = 28.9 bits (63), Expect = 8.3 Identities = 20/94 (21%), Positives = 41/94 (43%), Gaps = 2/94 (2%) Frame = -3 Query: 401 KECHPTIAEELGKHFANCELRPMVLVDRSNLGS--DSSTYNFAGKIPAGLDMPSDVADEK 228 K+C + EE+ KH +N P L + ++ G+ D + P P +E Sbjct: 409 KDCDREVEEEIKKHGSNPVGLPENLTNGASAGNGDDGLIPQRKSRKPENQQFPDTENEEY 468 Query: 227 HAEEASKN*RPSSTRMSLILYQTPVLADNELRID 126 H++E + + S + + Q +L + + +I+ Sbjct: 469 HSDEQNDTQKQLSEEQNTGISQDEILTNKQKQIE 502
>KPCI_HUMAN (P41743) Protein kinase C iota type (EC 2.7.11.13) (nPKC-iota)| (Atypical protein kinase C-lambda/iota) (aPKC-lambda/iota) (PRKC-lambda/iota) Length = 587 Score = 28.9 bits (63), Expect = 8.3 Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 4/76 (5%) Frame = -3 Query: 401 KECHPTIAEELGKHFANCELRPMVLVDRSNLGSDSS----TYNFAGKIPAGLDMPSDVAD 234 K+CH + E G+H + P++ +D+S++ SD + YN P+ + V + Sbjct: 171 KKCHKLVTIECGRH--SLPQEPVMPMDQSSMHSDHAQTVIPYN-----PSSHESLDQVGE 223 Query: 233 EKHAEEASKN*RPSST 186 EK A ++ + SS+ Sbjct: 224 EKEAMNTRESGKASSS 239
>PRTP_TUHV2 (Q9WRL6) Probable processing and transport protein| Length = 782 Score = 28.9 bits (63), Expect = 8.3 Identities = 18/66 (27%), Positives = 28/66 (42%) Frame = -3 Query: 485 DWLWTRKEKEIAIVSHSGFLYHTLNMYGKECHPTIAEELGKHFANCELRPMVLVDRSNLG 306 D+ + K E+ IV LNMY C T+ ELG++ + + + + LG Sbjct: 295 DFTYWSKTSEV-IVQRVNVTVQQLNMYHSLCR-TLRNELGQYLYGDRVEDLFTLSEAQLG 352 Query: 305 SDSSTY 288 D Y Sbjct: 353 EDERLY 358 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,800,755 Number of Sequences: 219361 Number of extensions: 1544612 Number of successful extensions: 3506 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 3414 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3506 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3696665728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)