ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart08c07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KPCI_PONPY (Q5R4K9) Protein kinase C iota type (EC 2.7.11.13) (n... 30 2.9
2STAT_ANOGA (Q7QDU4) Signal transducer and transcription activato... 29 6.4
3RL25_LEGPL (Q5WTE8) 50S ribosomal protein L25 (General stress pr... 29 8.3
4RL25_LEGPH (Q5ZS67) 50S ribosomal protein L25 (General stress pr... 29 8.3
5RL25_LEGPA (Q5X1N8) 50S ribosomal protein L25 (General stress pr... 29 8.3
6ANR21_HUMAN (Q86YR6) Ankyrin repeat domain-containing protein 21... 29 8.3
7POT15_HUMAN (Q6S5H4) Prostate, ovary, testis expressed protein o... 29 8.3
8KPCI_HUMAN (P41743) Protein kinase C iota type (EC 2.7.11.13) (n... 29 8.3
9PRTP_TUHV2 (Q9WRL6) Probable processing and transport protein 29 8.3

>KPCI_PONPY (Q5R4K9) Protein kinase C iota type (EC 2.7.11.13) (nPKC-iota)|
          Length = 587

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
 Frame = -3

Query: 401 KECHPTIAEELGKHFANCELRPMVLVDRSNLGSDSS----TYNFAGKIPAGLDMPSDVAD 234
           K+CH  +  E G+H    E  PM+ +D+S++ SD +     YN     P+  +    V +
Sbjct: 171 KKCHKLVTIECGRHSLPPE--PMMPMDQSSMHSDHAQTVIPYN-----PSSHESLDQVGE 223

Query: 233 EKHAEEASKN*RPSST 186
           EK A    ++ + SS+
Sbjct: 224 EKEAMNTRESGKASSS 239



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>STAT_ANOGA (Q7QDU4) Signal transducer and transcription activator (Ag-STAT)|
          Length = 722

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = -3

Query: 431 FLYHTL---NMYGKECHPTIAEELGKHFANCELRPMVLVDRSNLGSDSSTYN 285
           +LY T+     +G+   P I +   KH+ + E+R +++   S+  S SST N
Sbjct: 626 YLYPTIPKQEAFGRYTAPAIQKPRSKHYISAEMRTVLIFAPSSNQSSSSTPN 677



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>RL25_LEGPL (Q5WTE8) 50S ribosomal protein L25 (General stress protein CTC)|
          Length = 219

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 19/80 (23%), Positives = 31/80 (38%)
 Frame = -3

Query: 464 EKEIAIVSHSGFLYHTLNMYGKECHPTIAEELGKHFANCELRPMVLVDRSNLGSDSSTYN 285
           E++   +   G + HT+      C               +L   + VD S +G D   + 
Sbjct: 114 EEQSPGIKAGGIVQHTMTQVEIRCQAK------------DLPEFIEVDMSKVGMDDVVHL 161

Query: 284 FAGKIPAGLDMPSDVADEKH 225
              K+P G+ +  DVAD  H
Sbjct: 162 SDLKLPKGVQLTVDVADGSH 181



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>RL25_LEGPH (Q5ZS67) 50S ribosomal protein L25 (General stress protein CTC)|
          Length = 219

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 19/80 (23%), Positives = 31/80 (38%)
 Frame = -3

Query: 464 EKEIAIVSHSGFLYHTLNMYGKECHPTIAEELGKHFANCELRPMVLVDRSNLGSDSSTYN 285
           E++   +   G + HT+      C               +L   + VD S +G D   + 
Sbjct: 114 EEQSPGIKAGGIVQHTMTQVEIRCQAK------------DLPEFIEVDMSKVGMDDVVHL 161

Query: 284 FAGKIPAGLDMPSDVADEKH 225
              K+P G+ +  DVAD  H
Sbjct: 162 SDLKLPKGVQLTVDVADGSH 181



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>RL25_LEGPA (Q5X1N8) 50S ribosomal protein L25 (General stress protein CTC)|
          Length = 219

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 19/80 (23%), Positives = 31/80 (38%)
 Frame = -3

Query: 464 EKEIAIVSHSGFLYHTLNMYGKECHPTIAEELGKHFANCELRPMVLVDRSNLGSDSSTYN 285
           E++   +   G + HT+      C               +L   + VD S +G D   + 
Sbjct: 114 EEQSPGIKAGGIVQHTMTQVEIRCQAK------------DLPEFIEVDMSKVGMDDVVHL 161

Query: 284 FAGKIPAGLDMPSDVADEKH 225
              K+P G+ +  DVAD  H
Sbjct: 162 SDLKLPKGVQLTVDVADGSH 181



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>ANR21_HUMAN (Q86YR6) Ankyrin repeat domain-containing protein 21 (Protein POTE)|
           (Prostate, ovary, testis expressed protein)
          Length = 584

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 20/94 (21%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
 Frame = -3

Query: 401 KECHPTIAEELGKHFANCELRPMVLVDRSNLGS--DSSTYNFAGKIPAGLDMPSDVADEK 228
           K+C   + EE+ KH +N    P  L + ++ G+  D        + P     P    +E 
Sbjct: 409 KDCDREVEEEIKKHGSNPVGLPENLTNGASAGNGDDGLIPQRRSRKPENQQFPDTENEEY 468

Query: 227 HAEEASKN*RPSSTRMSLILYQTPVLADNELRID 126
           H++E +   +  S   +  + Q  +L + + +I+
Sbjct: 469 HSDEQNDTRKQLSEEQNTGISQDEILTNKQKQIE 502



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>POT15_HUMAN (Q6S5H4) Prostate, ovary, testis expressed protein on chromosome 15|
          Length = 581

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 20/94 (21%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
 Frame = -3

Query: 401 KECHPTIAEELGKHFANCELRPMVLVDRSNLGS--DSSTYNFAGKIPAGLDMPSDVADEK 228
           K+C   + EE+ KH +N    P  L + ++ G+  D        + P     P    +E 
Sbjct: 409 KDCDREVEEEIKKHGSNPVGLPENLTNGASAGNGDDGLIPQRKSRKPENQQFPDTENEEY 468

Query: 227 HAEEASKN*RPSSTRMSLILYQTPVLADNELRID 126
           H++E +   +  S   +  + Q  +L + + +I+
Sbjct: 469 HSDEQNDTQKQLSEEQNTGISQDEILTNKQKQIE 502



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>KPCI_HUMAN (P41743) Protein kinase C iota type (EC 2.7.11.13) (nPKC-iota)|
           (Atypical protein kinase C-lambda/iota)
           (aPKC-lambda/iota) (PRKC-lambda/iota)
          Length = 587

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
 Frame = -3

Query: 401 KECHPTIAEELGKHFANCELRPMVLVDRSNLGSDSS----TYNFAGKIPAGLDMPSDVAD 234
           K+CH  +  E G+H  +    P++ +D+S++ SD +     YN     P+  +    V +
Sbjct: 171 KKCHKLVTIECGRH--SLPQEPVMPMDQSSMHSDHAQTVIPYN-----PSSHESLDQVGE 223

Query: 233 EKHAEEASKN*RPSST 186
           EK A    ++ + SS+
Sbjct: 224 EKEAMNTRESGKASSS 239



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>PRTP_TUHV2 (Q9WRL6) Probable processing and transport protein|
          Length = 782

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 18/66 (27%), Positives = 28/66 (42%)
 Frame = -3

Query: 485 DWLWTRKEKEIAIVSHSGFLYHTLNMYGKECHPTIAEELGKHFANCELRPMVLVDRSNLG 306
           D+ +  K  E+ IV         LNMY   C  T+  ELG++     +  +  +  + LG
Sbjct: 295 DFTYWSKTSEV-IVQRVNVTVQQLNMYHSLCR-TLRNELGQYLYGDRVEDLFTLSEAQLG 352

Query: 305 SDSSTY 288
            D   Y
Sbjct: 353 EDERLY 358


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,800,755
Number of Sequences: 219361
Number of extensions: 1544612
Number of successful extensions: 3506
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3506
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3696665728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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