ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart08c07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470955.1| Oryza sativa (japonica cultivar-group), predic... 186 5e-44
2gb|AY106961.1| Zea mays PCO078813 mRNA sequence 127 4e-26
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 90 8e-15
4emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromosome 4,... 90 8e-15
5gb|AY106065.1| Zea mays PCO096468 mRNA sequence 84 5e-13
6gb|AC149607.6| Mus musculus BAC clone RP23-455C13 from chromosom... 46 0.11
7gb|L23552.1|SPIHSC70G Spinacia oleracea ER-lumenal protein (HSC7... 46 0.11
8gb|AC163672.4| Mus musculus BAC clone RP23-23B15 from chromosome... 42 1.7
9gb|AC091331.14| Mus musculus chromosome 1, clone RP23-293F4, com... 42 1.7
10gb|AC121574.3| Mus musculus BAC clone RP23-241E9 from 14, comple... 42 1.7
11emb|AL356277.18| Human DNA sequence from clone RP11-554D15 on ch... 42 1.7
12gb|AE014177.1| Mus musculus piebald deletion region section 5 of... 42 1.7
13gb|AC116363.2| Homo sapiens chromosome 5 clone RP11-758E17, comp... 42 1.7
14gb|AC158522.2| Mus musculus BAC clone RP23-400N21 from chromosom... 42 1.7
15gb|AC011900.6| Homo sapiens BAC clone RP11-542L18 from 2, comple... 42 1.7
16gb|AC026714.5|AC026714 Homo sapiens chromosome 5 clone CTD-2132P... 42 1.7
17gb|AC136003.10| Mus musculus chromosome 15, clone RP23-191C24, c... 42 1.7
18gb|AC139333.4| Mus musculus BAC clone RP24-83F12 from 3, complet... 42 1.7
19ref|NM_104608.2| Arabidopsis thaliana unknown protein AT1G58280 ... 40 6.9
20ref|NM_179495.1| Arabidopsis thaliana catalytic AT1G58280 transc... 40 6.9
21ref|NM_125842.2| Arabidopsis thaliana unknown protein AT5G64460 ... 40 6.9
22ref|NM_180935.1| Arabidopsis thaliana unknown protein AT5G64460 ... 40 6.9
23ref|NM_001037062.1| Arabidopsis thaliana unknown protein AT5G644... 40 6.9
24ref|NM_001037061.1| Arabidopsis thaliana unknown protein AT5G644... 40 6.9
25ref|NM_001037063.1| Arabidopsis thaliana unknown protein AT5G644... 40 6.9
26ref|XM_631633.1| Dictyostelium discoideum hypothetical protein (... 40 6.9
27gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete se... 40 6.9
28gb|AC010124.6| Drosophila melanogaster clone BACR06O03, complete... 40 6.9
29gb|AC110816.7| Mus musculus BAC clone RP23-20P15 from chromosome... 40 6.9
30gb|AC140781.3| Mus musculus BAC clone RP24-497M1 from chromosome... 40 6.9
31gb|AC124492.4| Mus musculus BAC clone RP23-454I23 from chromosom... 40 6.9
32gb|BT000924.1| Arabidopsis thaliana clone C105117 putative ZW10 ... 40 6.9
33gb|AC107759.18| Mus musculus chromosome 5, clone RP23-193N17, co... 40 6.9
34gb|AC073341.10| Homo sapiens BAC clone RP11-549I23 from 7, compl... 40 6.9
35gb|AY367771.1| Triticum aestivum HMW glutenin subunit (1Bx14) ge... 40 6.9
36gb|AY035144.1| Arabidopsis thaliana At5g64460 mRNA sequence 40 6.9
37gb|AE016828.2| Coxiella burnetii RSA 493, complete genome 40 6.9
38emb|CR847843.7| Zebrafish DNA sequence from clone RP71-50C18 in ... 40 6.9
39gb|AY084175.1| Drosophila melanogaster RE47936 full insert cDNA 40 6.9
40ref|XM_696102.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 6.9
41gb|AC115080.13| Mus musculus chromosome 7, clone RP24-464M7, com... 40 6.9
42gb|AC154732.3| Mus musculus BAC clone RP24-380F18 from chromosom... 40 6.9
43gb|BT022150.1| Drosophila melanogaster IP01431 full insert cDNA 40 6.9
44ref|XM_624506.1| PREDICTED: Apis mellifera similar to ENSANGP000... 40 6.9
45emb|BX831681.1|CNS0A0YP Arabidopsis thaliana Full-length cDNA Co... 40 6.9
46emb|BX833926.1|CNS0A0HX Arabidopsis thaliana Full-length cDNA Co... 40 6.9
47ref|NM_001015221.1| Drosophila melanogaster CG40351-PA.3 (CG4035... 40 6.9
48ref|NM_001015222.1| Drosophila melanogaster CG40351-PB.3 (CG4035... 40 6.9
49gb|BT003771.1| Drosophila melanogaster RE25317 full insert cDNA 40 6.9
50dbj|AB028195.1| Arabidopsis thaliana ZW10 mRNA, partial cds 40 6.9
51emb|CT030142.10| Mouse DNA sequence from clone RP23-422H22 on ch... 40 6.9
52gb|AE003685.5| Drosophila melanogaster chromosome 3R, section 23... 40 6.9
53dbj|AP003304.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 6.9
54gb|CP000225.1| Drosophila melanogaster genomic scaffold 21100002... 40 6.9
55emb|AL807386.14| Mouse DNA sequence from clone RP23-190K7 on chr... 40 6.9
56emb|AL732321.18| Mouse DNA sequence from clone RP23-167N17 on ch... 40 6.9
57emb|AL808018.7| Mouse DNA sequence from clone RP23-473C10 on chr... 40 6.9
58gb|AC121109.5| Mus musculus chromosome 7, clone RP24-445I8, comp... 40 6.9 
>ref|XM_470955.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 828

 Score =  186 bits (94), Expect = 5e-44
 Identities = 160/182 (87%)
 Strand = Plus / Minus

                                                                       
Query: 322 tcgaccaacaccatcggccggagctcacagttggcgaagtgcttgcccagttcctctgct 381
           |||||||||||||||| |||||||||||||||||| ||||||||||||| ||| |||  |
Sbjct: 737 tcgaccaacaccatcgaccggagctcacagttggcaaagtgcttgcccacttcttctctt 678

                                                                       
Query: 382 atggtcggatgacactctttaccgtacatgtttagggtatgatacaaaaaaccactatgg 441
           ||||| |||||||||||  | | ||||||| ||| ||| ||||| || || |||||||||
Sbjct: 677 atggttggatgacactccctgctgtacatgcttaaggtgtgatataagaatccactatgg 618

                                                                       
Query: 442 ctgacaatggctatctctttctcttttcttgtccataaccagtcaaagaacttcatgccc 501
           || ||||| ||||||||||||||||  ||||||||||||||||||| |||||||||||||
Sbjct: 617 cttacaatagctatctctttctcttcccttgtccataaccagtcaatgaacttcatgccc 558

             
Query: 502 ct 503
           ||
Sbjct: 557 ct 556
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>gb|AY106961.1| Zea mays PCO078813 mRNA sequence
          Length = 1308

 Score =  127 bits (64), Expect = 4e-26
 Identities = 157/188 (83%)
 Strand = Plus / Minus

                                                                       
Query: 316 cttctgtcgaccaacaccatcggccggagctcacagttggcgaagtgcttgcccagttcc 375
           |||||||| ||||||||||||| ||| ||||| ||||| || ||||||||||  | ||| 
Sbjct: 894 cttctgtcaaccaacaccatcgaccgtagctcgcagtttgcaaagtgcttgctaacttcg 835

                                                                       
Query: 376 tctgctatggtcggatgacactctttaccgtacatgtttagggtatgatacaaaaaacca 435
           |||  |||||| ||||| ||||| || | ||||||| ||| ||| ||| |||| ||||||
Sbjct: 834 tctcttatggttggatggcactccttgctgtacatgcttaaggtgtgaaacaagaaacca 775

                                                                       
Query: 436 ctatggctgacaatggctatctctttctcttttcttgtccataaccagtcaaagaacttc 495
           || || |||||||| |||||||||||||||| ||||||||| |||||||| |  ||||||
Sbjct: 774 ctgtgactgacaatagctatctctttctcttctcttgtccacaaccagtccataaacttc 715

                   
Query: 496 atgcccct 503
           || |||||
Sbjct: 714 atacccct 707
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 102/121 (84%)
 Strand = Plus / Minus

                                                                          
Query: 361    tgcttgcccagttcctctgctatggtcggatgacactctttaccgtacatgtttagggta 420
              |||||||||| ||| |||  |||||| |||||||||||  | | ||||||| ||| ||| 
Sbjct: 171875 tgcttgcccacttcttctcttatggttggatgacactccctgctgtacatgcttaaggtg 171816

                                                                          
Query: 421    tgatacaaaaaaccactatggctgacaatggctatctctttctcttttcttgtccataac 480
              ||||| || || ||||||||||| ||||| ||||||||||||||||  ||||||||||||
Sbjct: 171815 tgatataagaatccactatggcttacaatagctatctctttctcttcccttgtccataac 171756

               
Query: 481    c 481
              |
Sbjct: 171755 c 171755



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                 
Query: 322    tcgaccaacaccatcggccggagctcacagttggc 356
              |||||||||||||||| ||||||||||||||||||
Sbjct: 172242 tcgaccaacaccatcgaccggagctcacagttggc 172208



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 479    accagtcaaagaacttcatgcccct 503
              ||||||||| |||||||||||||||
Sbjct: 171202 accagtcaatgaacttcatgcccct 171178
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>emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0068L06,
              complete sequence
          Length = 145517

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 102/121 (84%)
 Strand = Plus / Minus

                                                                          
Query: 361    tgcttgcccagttcctctgctatggtcggatgacactctttaccgtacatgtttagggta 420
              |||||||||| ||| |||  |||||| |||||||||||  | | ||||||| ||| ||| 
Sbjct: 103162 tgcttgcccacttcttctcttatggttggatgacactccctgctgtacatgcttaaggtg 103103

                                                                          
Query: 421    tgatacaaaaaaccactatggctgacaatggctatctctttctcttttcttgtccataac 480
              ||||| || || ||||||||||| ||||| ||||||||||||||||  ||||||||||||
Sbjct: 103102 tgatataagaatccactatggcttacaatagctatctctttctcttcccttgtccataac 103043

               
Query: 481    c 481
              |
Sbjct: 103042 c 103042



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                 
Query: 322    tcgaccaacaccatcggccggagctcacagttggc 356
              |||||||||||||||| ||||||||||||||||||
Sbjct: 103529 tcgaccaacaccatcgaccggagctcacagttggc 103495



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 479    accagtcaaagaacttcatgcccct 503
              ||||||||| |||||||||||||||
Sbjct: 102489 accagtcaatgaacttcatgcccct 102465
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>gb|AY106065.1| Zea mays PCO096468 mRNA sequence
          Length = 1347

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                       
Query: 430 aaaccactatggctgacaatggctatctctttctcttttcttgtccataaccagtcaaag 489
           ||||| |||||| |||| |||||||||||| |||||| ||||||||||| |||||||| |
Sbjct: 786 aaaccgctatgggtgacgatggctatctctctctcttctcttgtccatagccagtcaatg 727

                         
Query: 490 aacttcatgcccct 503
           |||||||| |||||
Sbjct: 726 aacttcatacccct 713
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>gb|AC149607.6| Mus musculus BAC clone RP23-455C13 from chromosome 7, complete sequence
          Length = 206284

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 347   cacagttggcgaagtgcttgcccagtt 373
             |||||||||| ||||||||||||||||
Sbjct: 97781 cacagttggcaaagtgcttgcccagtt 97807
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>gb|L23552.1|SPIHSC70G Spinacia oleracea ER-lumenal protein (HSC70) gene, complete cds
          Length = 5138

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 39   tcaaacaacaaatcatcagataa 61
            |||||||||||||||||||||||
Sbjct: 2400 tcaaacaacaaatcatcagataa 2378
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>gb|AC163672.4| Mus musculus BAC clone RP23-23B15 from chromosome 3, complete sequence
          Length = 190599

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 4      cataagtccttattcccatga 24
              |||||||||||||||||||||
Sbjct: 183885 cataagtccttattcccatga 183905
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>gb|AC091331.14| Mus musculus chromosome 1, clone RP23-293F4, complete sequence
          Length = 236163

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 453   tatctctttctcttttcttgt 473
             |||||||||||||||||||||
Sbjct: 60120 tatctctttctcttttcttgt 60140
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>gb|AC121574.3| Mus musculus BAC clone RP23-241E9 from 14, complete sequence
          Length = 209230

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 451   gctatctctttctcttttctt 471
             |||||||||||||||||||||
Sbjct: 22434 gctatctctttctcttttctt 22414
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>emb|AL356277.18| Human DNA sequence from clone RP11-554D15 on chromosome 6 Contains a
              pseudogene similar to part of ubiquinol-cytochrome c
              reductase core protein II (UQCRC2), a novel gene and the 3'
              ends of two novel genes, complete sequence
          Length = 181891

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 54     tcagataaaacataaccaatc 74
              |||||||||||||||||||||
Sbjct: 164956 tcagataaaacataaccaatc 164976
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>gb|AE014177.1| Mus musculus piebald deletion region section 5 of 11 of the complete
              sequence
          Length = 400029

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 451    gctatctctttctcttttctt 471
              |||||||||||||||||||||
Sbjct: 234986 gctatctctttctcttttctt 235006
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>gb|AC116363.2| Homo sapiens chromosome 5 clone RP11-758E17, complete sequence
          Length = 194619

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 455    tctctttctcttttcttgtccataa 479
              ||||||||||| |||||||||||||
Sbjct: 160830 tctctttctctattcttgtccataa 160854
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>gb|AC158522.2| Mus musculus BAC clone RP23-400N21 from chromosome 14, complete sequence
          Length = 209322

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 17     tcccatgaatttgggtatgcg 37
              |||||||||||||||||||||
Sbjct: 149694 tcccatgaatttgggtatgcg 149674
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>gb|AC011900.6| Homo sapiens BAC clone RP11-542L18 from 2, complete sequence
          Length = 184053

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 202   cagttcttgctagcttcttca 222
             |||||||||||||||||||||
Sbjct: 59570 cagttcttgctagcttcttca 59550
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>gb|AC026714.5|AC026714 Homo sapiens chromosome 5 clone CTD-2132P24, complete sequence
          Length = 89153

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 455  tctctttctcttttcttgtccataa 479
            ||||||||||| |||||||||||||
Sbjct: 2716 tctctttctctattcttgtccataa 2740
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>gb|AC136003.10| Mus musculus chromosome 15, clone RP23-191C24, complete sequence
          Length = 214651

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 451    gctatctctttctcttttctt 471
              |||||||||||||||||||||
Sbjct: 144721 gctatctctttctcttttctt 144741
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>gb|AC139333.4| Mus musculus BAC clone RP24-83F12 from 3, complete sequence
          Length = 162197

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 4      cataagtccttattcccatga 24
              |||||||||||||||||||||
Sbjct: 111065 cataagtccttattcccatga 111045
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>ref|NM_104608.2| Arabidopsis thaliana unknown protein AT1G58280 transcript variant
           AT1G58280.1 mRNA, complete cds
          Length = 1068

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                       
Query: 421 tgatacaaaaaaccactatggctgacaatggctatctctttctcttttcttgtccataac 480
           |||||||| || ||||||||  | ||||  || |||||||| ||||| ||||| |  |||
Sbjct: 706 tgatacaagaacccactatgagttacaaccgcaatctctttttctttccttgtactcaac 647

                           
Query: 481 cagtcaaagaacttca 496
           |||| |||||||||||
Sbjct: 646 cagttaaagaacttca 631
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>ref|NM_179495.1| Arabidopsis thaliana catalytic AT1G58280 transcript variant
           AT1G58280.2 mRNA, complete cds
          Length = 1183

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                       
Query: 421 tgatacaaaaaaccactatggctgacaatggctatctctttctcttttcttgtccataac 480
           |||||||| || ||||||||  | ||||  || |||||||| ||||| ||||| |  |||
Sbjct: 821 tgatacaagaacccactatgagttacaaccgcaatctctttttctttccttgtactcaac 762

                           
Query: 481 cagtcaaagaacttca 496
           |||| |||||||||||
Sbjct: 761 cagttaaagaacttca 746
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>ref|NM_125842.2| Arabidopsis thaliana unknown protein AT5G64460 transcript variant
           AT5G64460.2 mRNA, complete cds
          Length = 1032

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 445 acaatggctatctctttctcttttcttgtccataaccagt 484
           ||||| ||||||||||| ||||| | |||||||| |||||
Sbjct: 675 acaatagctatctctttttctttccgtgtccatagccagt 636
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>ref|NM_180935.1| Arabidopsis thaliana unknown protein AT5G64460 transcript variant
           AT5G64460.1 mRNA, complete cds
          Length = 1056

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 445 acaatggctatctctttctcttttcttgtccataaccagt 484
           ||||| ||||||||||| ||||| | |||||||| |||||
Sbjct: 699 acaatagctatctctttttctttccgtgtccatagccagt 660
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>ref|NM_001037062.1| Arabidopsis thaliana unknown protein AT5G64460 transcript variant
           AT5G64460.4 mRNA, complete cds
          Length = 1046

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 445 acaatggctatctctttctcttttcttgtccataaccagt 484
           ||||| ||||||||||| ||||| | |||||||| |||||
Sbjct: 648 acaatagctatctctttttctttccgtgtccatagccagt 609
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>ref|NM_001037061.1| Arabidopsis thaliana unknown protein AT5G64460 transcript variant
           AT5G64460.3 mRNA, complete cds
          Length = 1071

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 445 acaatggctatctctttctcttttcttgtccataaccagt 484
           ||||| ||||||||||| ||||| | |||||||| |||||
Sbjct: 673 acaatagctatctctttttctttccgtgtccatagccagt 634
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>ref|NM_001037063.1| Arabidopsis thaliana unknown protein AT5G64460 transcript variant
           AT5G64460.5 mRNA, complete cds
          Length = 1146

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 445 acaatggctatctctttctcttttcttgtccataaccagt 484
           ||||| ||||||||||| ||||| | |||||||| |||||
Sbjct: 748 acaatagctatctctttttctttccgtgtccatagccagt 709
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>ref|XM_631633.1| Dictyostelium discoideum hypothetical protein (DDB0187919), partial
           mRNA
          Length = 726

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 455 tctctttctcttttcttgtccata 478
           ||||||||||||||||| ||||||
Sbjct: 332 tctctttctcttttcttttccata 309
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>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence
          Length = 285506

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    tctcagttcattgtcagcca 151
              ||||||||||||||||||||
Sbjct: 185365 tctcagttcattgtcagcca 185384
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>gb|AC010124.6| Drosophila melanogaster clone BACR06O03, complete sequence
          Length = 193483

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 450   ggctatctctttctcttttc 469
             ||||||||||||||||||||
Sbjct: 80190 ggctatctctttctcttttc 80171
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>gb|AC110816.7| Mus musculus BAC clone RP23-20P15 from chromosome 12, complete sequence
          Length = 216095

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 16     ttcccatgaatttgggtatg 35
              ||||||||||||||||||||
Sbjct: 172527 ttcccatgaatttgggtatg 172546
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>gb|AC140781.3| Mus musculus BAC clone RP24-497M1 from chromosome 19, complete sequence
          Length = 131111

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 455   tctctttctcttttcttgtc 474
             ||||||||||||||||||||
Sbjct: 69452 tctctttctcttttcttgtc 69433
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>gb|AC124492.4| Mus musculus BAC clone RP23-454I23 from chromosome 12, complete sequence
          Length = 176782

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     ttcccatgaatttgggtatg 35
              ||||||||||||||||||||
Sbjct: 136913 ttcccatgaatttgggtatg 136894
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>gb|BT000924.1| Arabidopsis thaliana clone C105117 putative ZW10 protein
           (At5g64460) mRNA, complete cds
          Length = 880

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 445 acaatggctatctctttctcttttcttgtccataaccagt 484
           ||||| ||||||||||| ||||| | |||||||| |||||
Sbjct: 611 acaatagctatctctttttctttccgtgtccatagccagt 572
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>gb|AC107759.18| Mus musculus chromosome 5, clone RP23-193N17, complete sequence
          Length = 262970

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 452    ctatctctttctcttttctt 471
              ||||||||||||||||||||
Sbjct: 121446 ctatctctttctcttttctt 121427
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>gb|AC073341.10| Homo sapiens BAC clone RP11-549I23 from 7, complete sequence
          Length = 185574

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 415   agggtatgatacaaaaaacc 434
             ||||||||||||||||||||
Sbjct: 97643 agggtatgatacaaaaaacc 97662
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>gb|AY367771.1| Triticum aestivum HMW glutenin subunit (1Bx14) gene, complete cds
          Length = 4021

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 132  tctcagttcattgtcagcca 151
            ||||||||||||||||||||
Sbjct: 3715 tctcagttcattgtcagcca 3734
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>gb|AY035144.1| Arabidopsis thaliana At5g64460 mRNA sequence
          Length = 1021

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 445 acaatggctatctctttctcttttcttgtccataaccagt 484
           ||||| ||||||||||| ||||| | |||||||| |||||
Sbjct: 699 acaatagctatctctttttctttccgtgtccatagccagt 660
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>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome
          Length = 1995281

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 35      gcgttcaaacaacaaatcat 54
               ||||||||||||||||||||
Sbjct: 1285292 gcgttcaaacaacaaatcat 1285311
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>emb|CR847843.7| Zebrafish DNA sequence from clone RP71-50C18 in linkage group 14,
             complete sequence
          Length = 162935

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 409   atgtttagggtatgatacaa 428
             ||||||||||||||||||||
Sbjct: 81165 atgtttagggtatgatacaa 81146
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>gb|AY084175.1| Drosophila melanogaster RE47936 full insert cDNA
          Length = 3637

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 447  aatggctatctctttctcttttcttgtc 474
            |||||| |||||||||||||| ||||||
Sbjct: 1065 aatggcgatctctttctctttccttgtc 1038
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>ref|XM_696102.1| PREDICTED: Danio rerio hypothetical protein LOC572391 (LOC572391),
           partial mRNA
          Length = 1341

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 452 ctatctctttctcttttcttgtcc 475
           |||||||||||||||| |||||||
Sbjct: 242 ctatctctttctctttccttgtcc 219
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>gb|AC115080.13| Mus musculus chromosome 7, clone RP24-464M7, complete sequence
          Length = 158221

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   tctattctcagttcattgtc 146
             ||||||||||||||||||||
Sbjct: 58151 tctattctcagttcattgtc 58132
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>gb|AC154732.3| Mus musculus BAC clone RP24-380F18 from chromosome 12, complete sequence
          Length = 172458

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 452    ctatctctttctcttttctt 471
              ||||||||||||||||||||
Sbjct: 150929 ctatctctttctcttttctt 150910
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>gb|BT022150.1| Drosophila melanogaster IP01431 full insert cDNA
          Length = 2006

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 447  aatggctatctctttctcttttcttgtc 474
            |||||| |||||||||||||| ||||||
Sbjct: 1047 aatggcgatctctttctctttccttgtc 1020
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>ref|XM_624506.1| PREDICTED: Apis mellifera similar to ENSANGP00000026362
           (LOC552126), mRNA
          Length = 1278

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 473 tccataaccagtcaaagaac 492
           ||||||||||||||||||||
Sbjct: 468 tccataaccagtcaaagaac 449
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>emb|BX831681.1|CNS0A0YP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH23ZE05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1334

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 445 acaatggctatctctttctcttttcttgtccataaccagt 484
           ||||| ||||||||||| ||||| | |||||||| |||||
Sbjct: 959 acaatagctatctctttttctttccgtgtccatagccagt 920
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>emb|BX833926.1|CNS0A0HX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL83ZG09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 999

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 445 acaatggctatctctttctcttttcttgtccataaccagt 484
           ||||| ||||||||||| ||||| | |||||||| |||||
Sbjct: 696 acaatagctatctctttttctttccgtgtccatagccagt 657
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>ref|NM_001015221.1| Drosophila melanogaster CG40351-PA.3 (CG40351), mRNA
          Length = 5268

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 447 aatggctatctctttctcttttcttgtc 474
           |||||| |||||||||||||| ||||||
Sbjct: 847 aatggcgatctctttctctttccttgtc 820
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>ref|NM_001015222.1| Drosophila melanogaster CG40351-PB.3 (CG40351), mRNA
          Length = 5486

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 447  aatggctatctctttctcttttcttgtc 474
            |||||| |||||||||||||| ||||||
Sbjct: 1065 aatggcgatctctttctctttccttgtc 1038
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>gb|BT003771.1| Drosophila melanogaster RE25317 full insert cDNA
          Length = 4798

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 450  ggctatctctttctcttttc 469
            ||||||||||||||||||||
Sbjct: 3053 ggctatctctttctcttttc 3072
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>dbj|AB028195.1| Arabidopsis thaliana ZW10 mRNA, partial cds
          Length = 1066

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                       
Query: 421 tgatacaaaaaaccactatggctgacaatggctatctctttctcttttcttgtccataac 480
           |||||||| || ||||||||  | ||||  || |||||||| ||||| ||||| |  |||
Sbjct: 706 tgatacaagaacccactatgagttacaaccgcaatctctttttctttccttgtactcaac 647

                           
Query: 481 cagtcaaagaacttca 496
           |||| |||||||||||
Sbjct: 646 cagttaaagaacttca 631
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>emb|CT030142.10| Mouse DNA sequence from clone RP23-422H22 on chromosome 12, complete
              sequence
          Length = 203796

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 452    ctatctctttctcttttctt 471
              ||||||||||||||||||||
Sbjct: 119794 ctatctctttctcttttctt 119813
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>gb|AE003685.5| Drosophila melanogaster chromosome 3R, section 23 of 118 of the
             complete sequence
          Length = 241476

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 450   ggctatctctttctcttttc 469
             ||||||||||||||||||||
Sbjct: 34823 ggctatctctttctcttttc 34842
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>dbj|AP003304.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-104B12, complete
            sequences
          Length = 182218

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 459  tttctcttttcttgtccata 478
            ||||||||||||||||||||
Sbjct: 8738 tttctcttttcttgtccata 8719
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>gb|CP000225.1| Drosophila melanogaster genomic scaffold 211000022280724
          Length = 820587

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 447    aatggctatctctttctcttttcttgtc 474
              |||||| |||||||||||||| ||||||
Sbjct: 440971 aatggcgatctctttctctttccttgtc 440944
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>emb|AL807386.14| Mouse DNA sequence from clone RP23-190K7 on chromosome 2, complete
              sequence
          Length = 183076

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 452    ctatctctttctcttttctt 471
              ||||||||||||||||||||
Sbjct: 162628 ctatctctttctcttttctt 162609
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>emb|AL732321.18| Mouse DNA sequence from clone RP23-167N17 on chromosome X, complete
              sequence
          Length = 216244

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 459    tttctcttttcttgtccata 478
              ||||||||||||||||||||
Sbjct: 164326 tttctcttttcttgtccata 164345
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>emb|AL808018.7| Mouse DNA sequence from clone RP23-473C10 on chromosome X, complete
             sequence
          Length = 172723

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    ttcccatgaatttgggtatg 35
             ||||||||||||||||||||
Sbjct: 16859 ttcccatgaatttgggtatg 16840
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>gb|AC121109.5| Mus musculus chromosome 7, clone RP24-445I8, complete sequence
          Length = 167819

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 127    tctattctcagttcattgtc 146
              ||||||||||||||||||||
Sbjct: 137296 tctattctcagttcattgtc 137277


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,258,423
Number of Sequences: 3902068
Number of extensions: 4258423
Number of successful extensions: 87845
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87695
Number of HSP's gapped (non-prelim): 150
length of query: 508
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 486
effective length of database: 17,147,199,772
effective search space: 8333539089192
effective search space used: 8333539089192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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