>gb|AC121546.13| Mus musculus chromosome 6, clone RP24-537N12, complete sequence
          Length = 207556

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 96     cagcaacagccttaccttat 115
              ||||||||||||||||||||
Sbjct: 202423 cagcaacagccttaccttat 202404

>gb|AC125524.4| Mus musculus BAC clone RP24-378N16 from chromosome 6, complete sequence
          Length = 175917

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 96     cagcaacagccttaccttat 115
              ||||||||||||||||||||
Sbjct: 173343 cagcaacagccttaccttat 173362

>gb|AC093376.5| Homo sapiens BAC clone RP11-147A22 from 7, complete sequence
          Length = 176162

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   accagtcccctctttccctc 139
             ||||||||||||||||||||
Sbjct: 35242 accagtcccctctttccctc 35223

>emb|BX546480.9| Zebrafish DNA sequence from clone DKEY-175C11, complete sequence
          Length = 203056

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    cttaccttattcttaccagt 125
              ||||||||||||||||||||
Sbjct: 199393 cttaccttattcttaccagt 199374

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 19       aatatatgcaacatcaacca 38
                ||||||||||||||||||||
Sbjct: 35249881 aatatatgcaacatcaacca 35249900

>emb|BX936380.8| Zebrafish DNA sequence from clone CH211-203K17 in linkage group 22,
             complete sequence
          Length = 84345

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     caaatgatagtaatatatgc 27
             ||||||||||||||||||||
Sbjct: 16610 caaatgatagtaatatatgc 16591

>emb|Z74269.1|SCYDL221W S.cerevisiae chromosome IV reading frame ORF YDL221w
          Length = 3440

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 115 ttcttaccagtcccctctttccct 138
           ||||||||| ||||||||||||||
Sbjct: 282 ttcttaccactcccctctttccct 305

>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24,
             complete sequence
          Length = 173770

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    aatatatgcaacatcaacca 38
             ||||||||||||||||||||
Sbjct: 45726 aatatatgcaacatcaacca 45745

>emb|AL732543.8| Mouse DNA sequence from clone RP23-13D22 on chromosome 4, complete
              sequence
          Length = 195272

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     aatgatagtaatatatgcaa 29
              ||||||||||||||||||||
Sbjct: 143906 aatgatagtaatatatgcaa 143925

>gb|M76550.1|YSCCDC13 Saccharomyces cerevisiae cell division cycle protein (CDC13) gene,
            complete cds
          Length = 3600

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 115  ttcttaccagtcccctctttccct 138
            ||||||||| ||||||||||||||
Sbjct: 3321 ttcttaccactcccctctttccct 3298

>ref|XM_519784.1| PREDICTED: Pan troglodytes similar to aspartate beta-hydroxylase
           isoform a; aspartyl/asparaginyl-beta-hydroxylase;
           junctin isoform 1; junctate; peptide-aspartate
           beta-dioxygenase; humbug (LOC464202), mRNA
          Length = 2681

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 121 ccagtcccctctttccctc 139
           |||||||||||||||||||
Sbjct: 728 ccagtcccctctttccctc 710

>gb|AY360393.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0096K16,
             complete sequence
          Length = 164501

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 88    tacngtagcagcaacagcctta 109
             ||| ||||||||||||||||||
Sbjct: 40840 taccgtagcagcaacagcctta 40819

>gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0070J19,
             complete sequence
          Length = 158749

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 88    tacngtagcagcaacagcctta 109
             ||| ||||||||||||||||||
Sbjct: 22407 taccgtagcagcaacagcctta 22428

>gb|AC108911.9| Mus musculus chromosome 3, clone RP24-176P16, complete sequence
          Length = 162278

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 30    catcaaccacaggtcttat 48
             |||||||||||||||||||
Sbjct: 63638 catcaaccacaggtcttat 63620

>gb|AC141114.14| Medicago truncatula clone mth2-8g20, complete sequence
          Length = 120527

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 8     caaatgatagtaatatatgcaac 30
             |||| ||||||||||||||||||
Sbjct: 30414 caaaagatagtaatatatgcaac 30392

>gb|AC162462.6| Mus musculus chromosome 3, clone RP23-55M9, complete sequence
          Length = 191456

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 30    catcaaccacaggtcttat 48
             |||||||||||||||||||
Sbjct: 76060 catcaaccacaggtcttat 76078

>emb|AL357139.11| Human DNA sequence from clone RP11-793L10 on chromosome 6 Contains a
             pseudogene similar to part of heterogeneous nuclear
             ribonucleoprotein D (37 kD AU-rich element RNA binding
             protein 1) (HNRPD) (P37 AUF1 AUF1A hnRNP D0), complete
             sequence
          Length = 128422

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 14    atagtaatatatgcaacat 32
             |||||||||||||||||||
Sbjct: 50393 atagtaatatatgcaacat 50375

>emb|AL138696.16| Human DNA sequence from clone RP11-369L4 on chromosome 13, complete
             sequence
          Length = 130931

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 7     ccaaatgatagtaatatat 25
             |||||||||||||||||||
Sbjct: 69263 ccaaatgatagtaatatat 69245

>gb|AF440620.1|AF440620 Homo sapiens 13q14 chronic lymphocytic leukemia suppressor locus
             section 2 of 2
          Length = 440917

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 7     ccaaatgatagtaatatat 25
             |||||||||||||||||||
Sbjct: 17178 ccaaatgatagtaatatat 17160

>gb|AF279660.2|AF279660 Homo sapiens CAR (RFP2) gene, complete cds; DLEU2 and DLEU1 genes,
              complete sequence; and RPL18 and p48/Hip pseudogenes,
              complete sequence
          Length = 347503

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 7      ccaaatgatagtaatatat 25
              |||||||||||||||||||
Sbjct: 319251 ccaaatgatagtaatatat 319233

>gb|AC005948.14| Homo sapiens chromosome 13 clone 460f10 map 13q14, complete sequence
          Length = 154065

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 7      ccaaatgatagtaatatat 25
              |||||||||||||||||||
Sbjct: 152088 ccaaatgatagtaatatat 152106

>gb|AC013358.32| Homo sapiens chromosome 13 clone 2252c9 map 13q14, complete sequence
          Length = 140312

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 7      ccaaatgatagtaatatat 25
              |||||||||||||||||||
Sbjct: 110797 ccaaatgatagtaatatat 110779

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                      
Query: 88       tacngtagcagcaacagcctta 109
                ||| ||||||||||||||||||
Sbjct: 12371428 taccgtagcagcaacagcctta 12371407

>dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0045D08
          Length = 160541

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 88     tacngtagcagcaacagcctta 109
              ||| ||||||||||||||||||
Sbjct: 130077 taccgtagcagcaacagcctta 130056

>emb|AL450169.1|CNS07EEW Genomic sequence at the putative B_CLL involved tumor suppressor gene
              locus on human chromosome 13q14.3 clone PAC 4E7,BAC
              93D9,PAC 63H3 of library LLNL from chromosome 13 of Homo
              sapiens (human)
          Length = 279647

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 7      ccaaatgatagtaatatat 25
              |||||||||||||||||||
Sbjct: 204429 ccaaatgatagtaatatat 204411

>gb|AY916039.1| Cryptobranchus alleganiensis NADH dehydrogenase subunit 1 (ND1) gene,
            partial cds; tRNA-Ile, tRNA-Gln, and tRNA-Met genes,
            complete sequence; NADH dehydrogenase subunit 2 (ND2)
            gene, complete cds; tRNA-Trp, tRNA-Ala, tRNA-Asn,
            tRNA-Cys, and tRNA-Tyr genes, complete sequence; and
            cytochrome c oxidase subunit I (COI) gene, partial cds;
            mitochondrial
          Length = 2038

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 33   caaccacaggtcttataccaaaa 55
            ||||||||||| |||||||||||
Sbjct: 1354 caaccacaggttttataccaaaa 1376

>gb|AY915920.1| Cryptobranchus alleganiensis voucher EJR1135 NADH dehydrogenase
           subunit 2 gene, complete cds; tRNA-Trp, tRNA-Ala,
           tRNA-Asn, tRNA-Cys, and tRNA-Tyr genes, complete
           sequence; and cytochrome oxidase subunit I gene, partial
           cds; mitochondrial
          Length = 1451

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 33  caaccacaggtcttataccaaaa 55
           ||||||||||| |||||||||||
Sbjct: 767 caaccacaggttttataccaaaa 789

>emb|AL845490.8| Mouse DNA sequence from clone RP23-259M16 on chromosome 2, complete
             sequence
          Length = 200794

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 38    acaggtcttataccaaaaa 56
             |||||||||||||||||||
Sbjct: 71498 acaggtcttataccaaaaa 71516


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,337,384
Number of Sequences: 3902068
Number of extensions: 1337384
Number of successful extensions: 89486
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89422
Number of HSP's gapped (non-prelim): 64
length of query: 147
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 126
effective length of database: 17,151,101,840
effective search space: 2161038831840
effective search space used: 2161038831840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)