Clone Name | rbart08c01 |
---|---|
Clone Library Name | barley_pub |
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 46.2 bits (108), Expect = 5e-05 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Frame = -3 Query: 500 YNLITFITEHPEAAGFKDVASACCGGGRLRAQTWCSPNAT-YCANRNDHVYWDEVHGTQ 327 Y +I+ + E P A GF++ CC G L A C + + C N + +++WD VH TQ Sbjct: 456 YTIISQMLETPAAYGFEETKKPCCKTGLLSAGALCKKSTSKICPNTSSYLFWDGVHPTQ 514
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 37.4 bits (85), Expect = 0.023 Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Frame = -3 Query: 500 YNLITFITEHPEAAGFKDVASACCGGGRLRAQTWCSPNA-TYCANRNDHVYWDEVHGTQ 327 Y++ + + E PE GF+++ CC G + +C +N + +++WD +H +Q Sbjct: 373 YSIFSKMLESPEDYGFEEIKKPCCKIGLTKGGVFCKERTLKNMSNASSYLFWDGLHPSQ 431
>GDF8_BUBBU (Q6X5V1) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 32.3 bits (72), Expect = 0.73 Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 4/63 (6%) Frame = -2 Query: 177 DREKEKRCTY----TSFRFFLWIXGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 +R E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 ERSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_SYLGR (Q5USV6) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 31.2 bits (69), Expect = 1.6 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -2 Query: 177 DREKEKRCTY----TSFRFFLWIXGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H K Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFLFLQKYPHTHLVHQANPK 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_SHEEP (O18830) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 31.2 bits (69), Expect = 1.6 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -2 Query: 177 DREKEKRCTY----TSFRFFLWIXGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H K Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFLFLQKYPHTHLVHQANPK 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_HEMJE (Q5USV8) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 31.2 bits (69), Expect = 1.6 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -2 Query: 177 DREKEKRCTY----TSFRFFLWIXGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H K Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFLFLQKYPHTHLVHQANPK 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_CAPIB (Q5USV9) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 31.2 bits (69), Expect = 1.6 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -2 Query: 177 DREKEKRCTY----TSFRFFLWIXGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H K Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFLFLQKYPHTHLVHQANPK 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>LPXA_CHLCV (Q820F0) Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine| O-acyltransferase (EC 2.3.1.129) (UDP-N-acetylglucosamine acyltransferase) Length = 279 Score = 30.8 bits (68), Expect = 2.1 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = +3 Query: 342 LVPVHMVVAIGAVSGVGRAPGLRPEPPSAAARAGHVLEPGGLRVLG 479 +V VH V IGA + VG G+R + P G+ + GG+ +G Sbjct: 151 MVGVHQFVRIGAHAMVGALSGIRRDVPPYTIGTGNPYQLGGINKVG 196
>GDF8_VULVU (Q6DTL9) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 30.4 bits (67), Expect = 2.8 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -2 Query: 177 DREKEKRCTY----TSFRFFLWIXGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCRRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_TAUDE (Q5USW0) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 30.4 bits (67), Expect = 2.8 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -2 Query: 177 DREKEKRCTY----TSFRFFLWIXGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_PIG (O18831) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 30.4 bits (67), Expect = 2.8 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -2 Query: 177 DREKEKRCTY----TSFRFFLWIXGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_MELGA (O42221) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 30.4 bits (67), Expect = 2.8 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -2 Query: 177 DREKEKRCTY----TSFRFFLWIXGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_MACFA (Q95J86) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 30.4 bits (67), Expect = 2.8 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -2 Query: 177 DREKEKRCTY----TSFRFFLWIXGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_LEPCA (Q8HY52) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 30.4 bits (67), Expect = 2.8 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -2 Query: 177 DREKEKRCTY----TSFRFFLWIXGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_HUMAN (O14793) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 30.4 bits (67), Expect = 2.8 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -2 Query: 177 DREKEKRCTY----TSFRFFLWIXGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_HORSE (Q9GM97) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 30.4 bits (67), Expect = 2.8 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -2 Query: 177 DREKEKRCTY----TSFRFFLWIXGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_CHICK (O42220) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 30.4 bits (67), Expect = 2.8 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -2 Query: 177 DREKEKRCTY----TSFRFFLWIXGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_CANFA (Q6UKZ8) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 30.4 bits (67), Expect = 2.8 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -2 Query: 177 DREKEKRCTY----TSFRFFLWIXGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_BOVIN (O18836) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 30.4 bits (67), Expect = 2.8 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -2 Query: 177 DREKEKRCTY----TSFRFFLWIXGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_BOSIN (Q5RZV4) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 30.4 bits (67), Expect = 2.8 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -2 Query: 177 DREKEKRCTY----TSFRFFLWIXGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_BOSGA (Q5USW1) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 30.4 bits (67), Expect = 2.8 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -2 Query: 177 DREKEKRCTY----TSFRFFLWIXGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_ANTAM (Q5USV5) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 30.4 bits (67), Expect = 2.8 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -2 Query: 177 DREKEKRCTY----TSFRFFLWIXGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_ALOLA (Q6J1J2) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 30.4 bits (67), Expect = 2.8 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -2 Query: 177 DREKEKRCTY----TSFRFFLWIXGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCRRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_AEPME (Q5USV7) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 30.4 bits (67), Expect = 2.8 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -2 Query: 177 DREKEKRCTY----TSFRFFLWIXGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_RAT (O35312) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 376 Score = 30.4 bits (67), Expect = 2.8 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -2 Query: 177 DREKEKRCTY----TSFRFFLWIXGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 275 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 334 Query: 9 GKA 1 G A Sbjct: 335 GSA 337
>GDF8_MOUSE (O08689) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 376 Score = 30.4 bits (67), Expect = 2.8 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -2 Query: 177 DREKEKRCTY----TSFRFFLWIXGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 275 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 334 Query: 9 GKA 1 G A Sbjct: 335 GSA 337
>LPXA_CHLTR (O84536) Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine| O-acyltransferase (EC 2.3.1.129) (UDP-N-acetylglucosamine acyltransferase) Length = 280 Score = 30.0 bits (66), Expect = 3.6 Identities = 16/46 (34%), Positives = 23/46 (50%) Frame = +3 Query: 342 LVPVHMVVAIGAVSGVGRAPGLRPEPPSAAARAGHVLEPGGLRVLG 479 +V VH V IG+ S VG G+R + P G+ GG+ +G Sbjct: 151 MVGVHQFVRIGSYSMVGAMSGIRRDIPPFTIGTGNPYALGGINKVG 196
>RAVR2_HUMAN (Q9HCJ3) Protein raver-2| Length = 691 Score = 29.3 bits (64), Expect = 6.2 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +3 Query: 369 IGAVSGVGRAPGLRPEPPSAAARAG 443 +G+ +G+G PGLR + PSA A G Sbjct: 16 LGSAAGLGPGPGLRGQGPSAEAHEG 40
>GDF8_CAPHI (Q6T5B8) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 28.9 bits (63), Expect = 8.1 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -2 Query: 126 WIXGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKKGKA 1 WI A + Y C C+F+F QK+P+ +H KG A Sbjct: 297 WII--APKRYKANYCSGECEFLFLQKYPHTHLVHQANPKGSA 336
>LRFN4_MOUSE (Q80XU8) Leucine-rich repeat and fibronectin type-III| domain-containing protein 4 precursor Length = 636 Score = 28.9 bits (63), Expect = 8.1 Identities = 20/88 (22%), Positives = 34/88 (38%) Frame = +1 Query: 103 FYCISXDPQKESKRRVSTSFLLLSIESKLTTDGGRAIMHRSPI*EETSCLKLMGAAKPSF 282 + CI+ +P E+ RV L L + +GGR + +A+ + Sbjct: 349 YTCIATNPAGEATARVELRVLALPHGGNTSAEGGR-----------PGPSDIAASARTAA 397 Query: 283 TGAAKMALAPLLEVAWVPCTSSQYTWSL 366 G + P ++V V TS +W L Sbjct: 398 EGEGTLESEPAVQVTEVTATSGLVSWGL 425
>LPXA_CHLPN (Q9Z7Q4) Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine| O-acyltransferase (EC 2.3.1.129) (UDP-N-acetylglucosamine acyltransferase) Length = 279 Score = 28.9 bits (63), Expect = 8.1 Identities = 15/46 (32%), Positives = 24/46 (52%) Frame = +3 Query: 342 LVPVHMVVAIGAVSGVGRAPGLRPEPPSAAARAGHVLEPGGLRVLG 479 +V VH V IGA + VG G+R + P +G+ + G+ +G Sbjct: 151 MVGVHQFVRIGAHAMVGALSGIRRDVPPYTIGSGNPYQLAGINKVG 196
>DSH_DROME (P51140) Segment polarity protein dishevelled| Length = 623 Score = 28.9 bits (63), Expect = 8.1 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = -2 Query: 384 HLLRQSQRPCVLGRGAWHPGHLQQGRQGH 298 +++ + + P +LGRG HP L G GH Sbjct: 474 YVVNEERNPNLLGRGHLHPHQLPHGHGGH 502 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,528,632 Number of Sequences: 219361 Number of extensions: 1234237 Number of successful extensions: 4019 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 3810 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4013 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3581144924 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)