ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart08c01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_506961.1| PREDICTED Oryza sativa (japonica cultivar-group), P0516G10.12-1 mRNA Length = 1637 Score = 75.8 bits (38), Expect = 1e-10 Identities = 131/162 (80%) Strand = Plus / Minus Query: 233 aagaagagacgagctgcttgaagttgatgggcgcggcgaagccgagcttcaccggtgcgg 292 ||||||| || |||||||||||||| ||||||| ||||||||| | || | ||| |||| Sbjct: 1386 aagaagaaacaagctgcttgaagttaatgggcgaggcgaagcccatctgcggcggcgcgg 1327 Query: 293 cgaagatggccttggcgcccttgttggaggtggcctgggtgccatgcacctcgtcccagt 352 | ||||||| ||||||||| ||||||||||||| || || |||||| |||||||| Sbjct: 1326 agtagatggcggcggcgcccttcctggaggtggcctgcgtcccgtgcaccccgtcccaga 1267 Query: 353 acacatggtcgttgcgattggcgcagtaagtggcgttgggcg 394 ||| | ||||||| ||| ||||||| |||| |||||||| Sbjct: 1266 acaggtacccgttgcggttgccgcagtaggtggagttgggcg 1225
>ref|XM_467707.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1637 Score = 75.8 bits (38), Expect = 1e-10 Identities = 131/162 (80%) Strand = Plus / Minus Query: 233 aagaagagacgagctgcttgaagttgatgggcgcggcgaagccgagcttcaccggtgcgg 292 ||||||| || |||||||||||||| ||||||| ||||||||| | || | ||| |||| Sbjct: 1385 aagaagaaacaagctgcttgaagttaatgggcgaggcgaagcccatctgcggcggcgcgg 1326 Query: 293 cgaagatggccttggcgcccttgttggaggtggcctgggtgccatgcacctcgtcccagt 352 | ||||||| ||||||||| ||||||||||||| || || |||||| |||||||| Sbjct: 1325 agtagatggcggcggcgcccttcctggaggtggcctgcgtcccgtgcaccccgtcccaga 1266 Query: 353 acacatggtcgttgcgattggcgcagtaagtggcgttgggcg 394 ||| | ||||||| ||| ||||||| |||| |||||||| Sbjct: 1265 acaggtacccgttgcggttgccgcagtaggtggagttgggcg 1224
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 75.8 bits (38), Expect = 1e-10 Identities = 131/162 (80%) Strand = Plus / Plus Query: 233 aagaagagacgagctgcttgaagttgatgggcgcggcgaagccgagcttcaccggtgcgg 292 ||||||| || |||||||||||||| ||||||| ||||||||| | || | ||| |||| Sbjct: 30984410 aagaagaaacaagctgcttgaagttaatgggcgaggcgaagcccatctgcggcggcgcgg 30984469 Query: 293 cgaagatggccttggcgcccttgttggaggtggcctgggtgccatgcacctcgtcccagt 352 | ||||||| ||||||||| ||||||||||||| || || |||||| |||||||| Sbjct: 30984470 agtagatggcggcggcgcccttcctggaggtggcctgcgtcccgtgcaccccgtcccaga 30984529 Query: 353 acacatggtcgttgcgattggcgcagtaagtggcgttgggcg 394 ||| | ||||||| ||| ||||||| |||| |||||||| Sbjct: 30984530 acaggtacccgttgcggttgccgcagtaggtggagttgggcg 30984571
>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516G10 Length = 148937 Score = 75.8 bits (38), Expect = 1e-10 Identities = 131/162 (80%) Strand = Plus / Plus Query: 233 aagaagagacgagctgcttgaagttgatgggcgcggcgaagccgagcttcaccggtgcgg 292 ||||||| || |||||||||||||| ||||||| ||||||||| | || | ||| |||| Sbjct: 39366 aagaagaaacaagctgcttgaagttaatgggcgaggcgaagcccatctgcggcggcgcgg 39425 Query: 293 cgaagatggccttggcgcccttgttggaggtggcctgggtgccatgcacctcgtcccagt 352 | ||||||| ||||||||| ||||||||||||| || || |||||| |||||||| Sbjct: 39426 agtagatggcggcggcgcccttcctggaggtggcctgcgtcccgtgcaccccgtcccaga 39485 Query: 353 acacatggtcgttgcgattggcgcagtaagtggcgttgggcg 394 ||| | ||||||| ||| ||||||| |||| |||||||| Sbjct: 39486 acaggtacccgttgcggttgccgcagtaggtggagttgggcg 39527
>dbj|AK099325.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033016K19, full insert sequence Length = 1637 Score = 75.8 bits (38), Expect = 1e-10 Identities = 131/162 (80%) Strand = Plus / Minus Query: 233 aagaagagacgagctgcttgaagttgatgggcgcggcgaagccgagcttcaccggtgcgg 292 ||||||| || |||||||||||||| ||||||| ||||||||| | || | ||| |||| Sbjct: 1385 aagaagaaacaagctgcttgaagttaatgggcgaggcgaagcccatctgcggcggcgcgg 1326 Query: 293 cgaagatggccttggcgcccttgttggaggtggcctgggtgccatgcacctcgtcccagt 352 | ||||||| ||||||||| ||||||||||||| || || |||||| |||||||| Sbjct: 1325 agtagatggcggcggcgcccttcctggaggtggcctgcgtcccgtgcaccccgtcccaga 1266 Query: 353 acacatggtcgttgcgattggcgcagtaagtggcgttgggcg 394 ||| | ||||||| ||| ||||||| |||| |||||||| Sbjct: 1265 acaggtacccgttgcggttgccgcagtaggtggagttgggcg 1224
>dbj|AK070261.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042P13, full insert sequence Length = 1637 Score = 67.9 bits (34), Expect = 3e-08 Identities = 130/162 (80%) Strand = Plus / Minus Query: 233 aagaagagacgagctgcttgaagttgatgggcgcggcgaagccgagcttcaccggtgcgg 292 ||||||| || |||||||||||||| ||||||| ||||||||| | || | ||| || | Sbjct: 1386 aagaagaaacaagctgcttgaagttaatgggcgaggcgaagcccatctgcggcggcgctg 1327 Query: 293 cgaagatggccttggcgcccttgttggaggtggcctgggtgccatgcacctcgtcccagt 352 | ||||||| ||||||||| ||||||||||||| || || |||||| |||||||| Sbjct: 1326 agtagatggcggcggcgcccttcctggaggtggcctgcgtcccgtgcaccccgtcccaga 1267 Query: 353 acacatggtcgttgcgattggcgcagtaagtggcgttgggcg 394 ||| | ||||||| ||| ||||||| |||| |||||||| Sbjct: 1266 acaggtacccgttgcggttgccgcagtaggtggagttgggcg 1225
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 415 agcctccctccgccgcagcacgcgctg 441 |||||||| |||||||||||||||||| Sbjct: 30312824 agcctcccgccgccgcagcacgcgctg 30312850
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548E04 Length = 138037 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 415 agcctccctccgccgcagcacgcgctg 441 |||||||| |||||||||||||||||| Sbjct: 59419 agcctcccgccgccgcagcacgcgctg 59445
>emb|AJ330768.1|HSA330768 Homo sapiens genomic sequence surrounding NotI site, clone HSJ4P-J13RS Length = 694 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 40 gtttggccatttttgtttgaaga 62 ||||||||||||||||||||||| Sbjct: 471 gtttggccatttttgtttgaaga 449
>emb|BX465848.13| Zebrafish DNA sequence from clone RP71-84E6, complete sequence Length = 179411 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 tgaagataaatttgcatgcat 77 ||||||||||||||||||||| Sbjct: 147296 tgaagataaatttgcatgcat 147316
>gb|AC125183.4| Mus musculus BAC clone RP23-297M4 from 5, complete sequence Length = 221622 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 atttttgtttgaagataaatt 68 ||||||||||||||||||||| Sbjct: 96318 atttttgtttgaagataaatt 96338
>emb|CR293527.6| Zebrafish DNA sequence from clone DKEYP-66A7 in linkage group 23, complete sequence Length = 76004 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 tgaagataaatttgcatgcat 77 ||||||||||||||||||||| Sbjct: 54532 tgaagataaatttgcatgcat 54552
>dbj|AB015471.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9B18 Length = 10085 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 tgtttgaagataaatttgcat 73 ||||||||||||||||||||| Sbjct: 1325 tgtttgaagataaatttgcat 1345
>emb|AJ341749.1|HSA341749 Homo sapiens genomic sequence surrounding NotI site, clone NL6-HI7R Length = 502 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 gcgcccggagcctccctccgc 427 ||||||||||||||||||||| Sbjct: 185 gcgcccggagcctccctccgc 205
>emb|AJ338317.1|HSA338317 Homo sapiens genomic sequence surrounding NotI site, clone NB6-690R Length = 1035 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 gcgcccggagcctccctccgc 427 ||||||||||||||||||||| Sbjct: 185 gcgcccggagcctccctccgc 205
>emb|CR392007.7| Zebrafish DNA sequence from clone DKEYP-52F1 in linkage group 18, complete sequence Length = 116358 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 tgaagataaatttgcatgcat 77 ||||||||||||||||||||| Sbjct: 50683 tgaagataaatttgcatgcat 50663
>emb|CR385078.23| Zebrafish DNA sequence from clone DKEYP-104F11 in linkage group 20, complete sequence Length = 182152 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 tgaagataaatttgcatgcat 77 ||||||||||||||||||||| Sbjct: 24462 tgaagataaatttgcatgcat 24442
>emb|CR925778.5| Zebrafish DNA sequence from clone DKEY-63L2 in linkage group 10, complete sequence Length = 211740 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 tttgaagataaatttgcatgc 75 ||||||||||||||||||||| Sbjct: 47092 tttgaagataaatttgcatgc 47072
>emb|BX914214.12| Zebrafish DNA sequence from clone DKEY-9I5 in linkage group 3, complete sequence Length = 137573 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 tgaagataaatttgcatgcat 77 ||||||||||||||||||||| Sbjct: 35097 tgaagataaatttgcatgcat 35117
>emb|BX000353.8| Zebrafish DNA sequence from clone DKEY-147H15, complete sequence Length = 189040 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 tttgaagataaatttgcatgc 75 ||||||||||||||||||||| Sbjct: 93401 tttgaagataaatttgcatgc 93421
>emb|AJ342294.1|HSA342294 Homo sapiens genomic sequence surrounding NotI site, clone NL4-CD22R Length = 819 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 gcgcccggagcctccctccgc 427 ||||||||||||||||||||| Sbjct: 185 gcgcccggagcctccctccgc 205
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 acatcttttctccttctctc 173 |||||||||||||||||||| Sbjct: 683903 acatcttttctccttctctc 683884
>gb|AC108223.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019A16, complete sequence Length = 175425 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 448 tccttgaacccggcggcctccggg 471 ||||||||| |||||||||||||| Sbjct: 54085 tccttgaactcggcggcctccggg 54062
>ref|XM_413867.1| PREDICTED: Gallus gallus similar to MGC75581 protein (LOC415494), mRNA Length = 2024 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 gcgcccggagcctccctccg 426 |||||||||||||||||||| Sbjct: 1604 gcgcccggagcctccctccg 1585
>ref|XM_572864.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNI02510) partial mRNA Length = 2685 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 acatcttttctccttctctc 173 |||||||||||||||||||| Sbjct: 1297 acatcttttctccttctctc 1278
>gb|AC165343.3| Mus musculus BAC clone RP23-476C24 from chromosome 17, complete sequence Length = 190724 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gtaagtacatcttttctcct 167 |||||||||||||||||||| Sbjct: 92789 gtaagtacatcttttctcct 92808
>emb|AL118522.32|HSDJ781B1 Human DNA sequence from clone RP4-781B1 on chromosome 20 Contains the 5' end of a novel gene, the KCNK15 gene for potassium channel subfamily K member 15, a novel gene, the RIMS4 gene for regulating synaptic membrane exocytosis 4 and three CpG islands, complete sequence Length = 107109 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 cgcccggagcctccctccgc 427 |||||||||||||||||||| Sbjct: 8338 cgcccggagcctccctccgc 8357
>emb|AJ001431.1|RGLMANDER Rhodotorula graminis mRNA for L-mandelate dehydrogenase Length = 1476 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 cgaagatggccttggcgccc 312 |||||||||||||||||||| Sbjct: 817 cgaagatggccttggcgccc 798
>emb|AJ001430.1|RGLMANDED Rhodotorula graminis DNA for L-mandelate dehydrogenase gene Length = 2788 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 cgaagatggccttggcgccc 312 |||||||||||||||||||| Sbjct: 1628 cgaagatggccttggcgccc 1609
>gb|AC013564.7| Homo sapiens chromosome 15, clone RP11-321F6, complete sequence Length = 210133 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 catcagggcaccctctctct 94 |||||||||||||||||||| Sbjct: 122022 catcagggcaccctctctct 122041
>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 Length = 2505489 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 tttctccttctctcgatcgaatca 183 |||||| ||||||||||||||||| Sbjct: 2408143 tttctctttctctcgatcgaatca 2408120
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 gtccttgaacccggcggcct 466 |||||||||||||||||||| Sbjct: 3047556 gtccttgaacccggcggcct 3047537
>gb|AC091879.2| Homo sapiens chromosome 5 clone CTD-3136G21, complete sequence Length = 170712 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 tcagggcaccctctctctat 96 |||||||||||||||||||| Sbjct: 80307 tcagggcaccctctctctat 80326
>gb|AF294352.1| Homo sapiens tandem acid-sensitive potassium channel TASK5 (KCNK15) gene, complete cds Length = 16930 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 cgcccggagcctccctccgc 427 |||||||||||||||||||| Sbjct: 14184 cgcccggagcctccctccgc 14165
>emb|CR389858.1| Gallus gallus finished cDNA, clone ChEST711k14 Length = 1030 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 gcgcccggagcctccctccg 426 |||||||||||||||||||| Sbjct: 78 gcgcccggagcctccctccg 59
>emb|CR387642.1| Gallus gallus finished cDNA, clone ChEST51k2 Length = 1092 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 gcgcccggagcctccctccg 426 |||||||||||||||||||| Sbjct: 144 gcgcccggagcctccctccg 125
>emb|CR385904.1| Gallus gallus finished cDNA, clone ChEST590h22 Length = 1015 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 gcgcccggagcctccctccg 426 |||||||||||||||||||| Sbjct: 64 gcgcccggagcctccctccg 45
>gb|AF124817.1|AF124817 Mentha x piperita cytochrome p450 isoform PM2 mRNA, complete cds Length = 1497 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 gccgcagcacgcgctggcca 445 |||||||||||||||||||| Sbjct: 165 gccgcagcacgcgctggcca 184
>gb|AF124816.1|AF124816 Mentha x piperita cytochrome p450 isoform PM17 mRNA, complete cds Length = 1503 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 gccgcagcacgcgctggcca 445 |||||||||||||||||||| Sbjct: 165 gccgcagcacgcgctggcca 184
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 324 ggcctgggtgccatgcacctcgtcccag 351 |||||||||||| ||||||| ||||||| Sbjct: 23329189 ggcctgggtgccgtgcaccttgtcccag 23329216
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 448 tccttgaacccggcggcctccggg 471 ||||||||| |||||||||||||| Sbjct: 19185297 tccttgaactcggcggcctccggg 19185274
>gb|AC006209.25| Homo sapiens X BAC GS1-546D14 (Genome Systems Human Bac Library) complete sequence Length = 141759 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 86 cctctctctatatatgattctattgcat 113 ||||||||||||||| ||||||||||| Sbjct: 50221 cctctctctatatatatttctattgcat 50248
>gb|AC006040.3|AC006040 Homo sapiens BAC clone RP11-400O10 from Y, complete sequence Length = 186504 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 86 cctctctctatatatgattctattgcat 113 ||||||||||||||| ||||||||||| Sbjct: 30517 cctctctctatatatatttctattgcat 30490
>emb|AJ341583.1|HSA341583 Homo sapiens genomic sequence surrounding NotI site, clone NL6-EF11R Length = 563 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 cgcccggagcctccctccgc 427 |||||||||||||||||||| Sbjct: 187 cgcccggagcctccctccgc 206
>emb|AJ340089.1|HSA340089 Homo sapiens genomic sequence surrounding NotI site, clone NL6-BE5R Length = 733 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 cgcccggagcctccctccgc 427 |||||||||||||||||||| Sbjct: 187 cgcccggagcctccctccgc 206
>emb|AJ341996.1|HSA341996 Homo sapiens genomic sequence surrounding NotI site, clone NL6-LM23C Length = 677 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 cgcccggagcctccctccgc 427 |||||||||||||||||||| Sbjct: 187 cgcccggagcctccctccgc 206
>dbj|AK071697.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108M03, full insert sequence Length = 1582 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 324 ggcctgggtgccatgcacctcgtcccag 351 |||||||||||| ||||||| ||||||| Sbjct: 1098 ggcctgggtgccgtgcaccttgtcccag 1071
>dbj|AK070277.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050D08, full insert sequence Length = 1741 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 324 ggcctgggtgccatgcacctcgtcccag 351 |||||||||||| ||||||| ||||||| Sbjct: 1098 ggcctgggtgccgtgcaccttgtcccag 1071
>dbj|AK060201.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-G04, full insert sequence Length = 1637 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 324 ggcctgggtgccatgcacctcgtcccag 351 |||||||||||| ||||||| ||||||| Sbjct: 1172 ggcctgggtgccgtgcaccttgtcccag 1145
>dbj|AK059954.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-C12, full insert sequence Length = 1328 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 324 ggcctgggtgccatgcacctcgtcccag 351 |||||||||||| ||||||| ||||||| Sbjct: 863 ggcctgggtgccgtgcaccttgtcccag 836
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 448 tccttgaacccggcggcctccggg 471 ||||||||| |||||||||||||| Sbjct: 19344846 tccttgaactcggcggcctccggg 19344823
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 324 ggcctgggtgccatgcacctcgtcccag 351 |||||||||||| ||||||| ||||||| Sbjct: 23257380 ggcctgggtgccgtgcaccttgtcccag 23257407
>emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa0011B18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 168063 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 324 ggcctgggtgccatgcacctcgtcccag 351 |||||||||||| ||||||| ||||||| Sbjct: 142307 ggcctgggtgccgtgcaccttgtcccag 142334
>dbj|AP002439.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-691H4, complete sequence Length = 188604 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 catttttgtttgaagataaa 66 |||||||||||||||||||| Sbjct: 165563 catttttgtttgaagataaa 165544
>dbj|AP005131.2| Homo sapiens genomic DNA, chromosome 18, clone:RP11-53B2, complete sequence Length = 162119 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 catttttgtttgaagataaa 66 |||||||||||||||||||| Sbjct: 38029 catttttgtttgaagataaa 38010 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,014,500 Number of Sequences: 3902068 Number of extensions: 4014500 Number of successful extensions: 97049 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 55 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 96680 Number of HSP's gapped (non-prelim): 364 length of query: 502 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 480 effective length of database: 17,147,199,772 effective search space: 8230655890560 effective search space used: 8230655890560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
