>PCP2_HUMAN (Q8IVA1) Purkinje cell protein 2 homolog|
          Length = 99

 Score = 32.7 bits (73), Expect = 0.51
 Identities = 21/54 (38%), Positives = 27/54 (50%)
 Frame = -1

Query: 239 LSGQRKLSRSGPEITRKYQEDQAPRSINMDGM*SSLASTYGRDIHNGRVVSHGL 78
           + GQR   ++GP  T K Q D  P    MD +   LAST GR + + RV    L
Sbjct: 1   MEGQRCSLQAGPGQTTKSQSDPTP---EMDSLMDMLASTQGRRMDDQRVTVSSL 51

>KE4L_CAEEL (Q9XTQ7) Hypothetical Ke4-like protein H13N06.5 in chromosome X|
          Length = 462

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +1

Query: 232 PESLRSCQLAVLL*ILVIFGAGAVAGDALDEVVEHVQELGGEAGH 366
           P    + +   LL +L+ FG+G + GDA   ++ H    G   GH
Sbjct: 180 PIQANTSESGPLLKVLLAFGSGGLLGDAFLHLIPHATPAGDGHGH 224

>PNP_PSEPU (O87792) Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)|
           (Polynucleotide phosphorylase) (PNPase)
          Length = 701

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 283 IFGAGAVAGDALDEVVEHVQELGGEAGHGSWCW 381
           + GA   A D    V++ V+EL  EAG  +W W
Sbjct: 202 MLGAVLFAHDEFQAVIQAVKELAAEAGKPTWDW 234

>GNTP_BACLI (P46832) Gluconate permease|
          Length = 448

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +1

Query: 274 ILVIFGAGAVAGDALDEVVEHVQE-LGGEAGH 366
           I+V FG     G  LD++V+ ++E LGG  GH
Sbjct: 29  IIVSFGVALALGMPLDDIVKTIEEGLGGTLGH 60

>RPOC_SHEON (Q8EK73) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1405

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 131 ASTYGRDIHNGRVVSHGLKISVI 63
           A+ YGRD+  G +++HG  I V+
Sbjct: 896 AACYGRDLARGHIINHGEAIGVV 918

>PRIM_UREPA (Q9PPZ6) DNA primase (EC 2.7.7.-)|
          Length = 641

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = -3

Query: 357 FASQLLDVFYDLVERVTGYSARAEDDKDLEKHSKLATTEAFRTEEVV 217
           F  +++   YD +  V G+S R   ++   K+    TT  F+ +EV+
Sbjct: 207 FNDRIIFSIYDHLNNVVGFSGRIITNEKTPKYLNTKTTAVFKKDEVL 253

>CHS5_SCHPO (Q92357) Probable chitin biosynthesis protein C6G9.12 (CHS5|
           homolog)
          Length = 620

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = -3

Query: 279 KDLEKHSKLATTEAFRTEEVVEIRSRNHPEVPGGSGA--QVN 160
           KD E+HS L +T A   ++  E+ + NH E P    A  Q+N
Sbjct: 385 KDAEEHSNLESTPA--AQQTSEVEANNHQEKPSSLPAVEQIN 424


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,524,247
Number of Sequences: 219361
Number of extensions: 988134
Number of successful extensions: 2602
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2602
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)